View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1576_low_67 (Length: 207)
Name: NF1576_low_67
Description: NF1576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1576_low_67 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 13073187 - 13073360
Alignment:
| Q |
18 |
ccaaatacggtattcaacacttcttcgatcgccacacaactcaacaacaaaactctcagaaacttcaatccaccgattcaaatgcaacatctcaagttgc |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
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| T |
13073187 |
ccaaatacggtattcaacacttcttcgatcgccacacaactcaacaacaaaactctcagaaacttcaatccaacaattcaaatgcaacatctcaagttgc |
13073286 |
T |
|
| Q |
118 |
tgatgctgcttccgattctcgaccaccgccggaaaaatccaccgatgctgttaatgaggctgatacgttatctg |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
13073287 |
tgatgctgcttccgattctcgaccaccgccggaaaaatctaccgatgctgttaatgaggctgatacgttatctg |
13073360 |
T |
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