View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1613_high_13 (Length: 238)
Name: NF1613_high_13
Description: NF1613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1613_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 5517208 - 5517426
Alignment:
| Q |
23 |
aatagctagcaaaaaactagagtttttatagaaaagttcaaagttcaaaacctagctaaagctagcctggcattattccaattggtatgttaaatacttg |
122 |
Q |
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| T |
5517208 |
aataactagcaaaaaactagagtttttatagaaaagttcaaagttcaaaacctagctaaagctagcctggcattattccaattggtatgttaaatactta |
5517307 |
T |
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| Q |
123 |
ggacaactcaaattaaaac---tgaatatactaaattacaatcaagtgactaaagaaaaaacaatgccagggaactggttggtatggactacaatgattg |
219 |
Q |
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| T |
5517308 |
ggacagctcaaattaaaacacatgaatatactaaattacaatcaagtgactaaagaaaaaacaatgccagggaaccggttggtatggactacaatgattg |
5517407 |
T |
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| Q |
220 |
aacgtggccatcctgttgc |
238 |
Q |
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||||||||||| ||||||| |
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| T |
5517408 |
aacgtggccattctgttgc |
5517426 |
T |
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