View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1613_low_16 (Length: 246)
Name: NF1613_low_16
Description: NF1613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1613_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 40063866 - 40063637
Alignment:
Q |
4 |
aataattgttttaagagaacaaaaatcataatccaatacatgtccttattattaa-taaataataatgtcaactataaaattcttttcattttatgtata |
102 |
Q |
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T |
40063866 |
aataatttttttaagataacaaaaatcataatccaatagatgtccttattattaaataaataataatgtcaactataaaattcttttcatttattgtata |
40063767 |
T |
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Q |
103 |
tttggagtgatattttgcctctattttgacattcatataactaatgacacatcatcaaagcaaagttagtaccaattccaaccccagcctgcagatgagt |
202 |
Q |
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T |
40063766 |
ttttgagtgatattttgcctctattttgacattcatataactaatgacacatcatcaaagcaaagttagtaccaattccaaccccagcctgcagatgagt |
40063667 |
T |
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Q |
203 |
gagttttgccaaactagcacgcctcaatat |
232 |
Q |
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T |
40063666 |
gagttttgccaaactagcacgcctcaatat |
40063637 |
T |
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