View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1624_low_26 (Length: 310)

Name: NF1624_low_26
Description: NF1624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1624_low_26
NF1624_low_26
[»] chr3 (61 HSPs)
chr3 (5-186)||(14756006-14756187)
chr3 (40-185)||(17776921-17777066)
chr3 (40-185)||(19078222-19078367)
chr3 (46-186)||(2868608-2868748)
chr3 (46-186)||(36097588-36097728)
chr3 (40-186)||(46785906-46786054)
chr3 (65-169)||(11251079-11251183)
chr3 (31-186)||(54122142-54122297)
chr3 (72-186)||(21296462-21296576)
chr3 (45-186)||(9017835-9017976)
chr3 (63-184)||(33994693-33994814)
chr3 (46-186)||(10855028-10855168)
chr3 (31-186)||(5245446-5245601)
chr3 (31-186)||(52325211-52325366)
chr3 (46-186)||(26134636-26134776)
chr3 (46-186)||(15280639-15280778)
chr3 (67-186)||(32023054-32023174)
chr3 (80-171)||(1772073-1772164)
chr3 (47-186)||(53876370-53876509)
chr3 (48-186)||(1334716-1334854)
chr3 (64-186)||(39866504-39866626)
chr3 (72-186)||(43639475-43639589)
chr3 (65-186)||(32827256-32827377)
chr3 (47-143)||(39364971-39365068)
chr3 (47-186)||(15082036-15082176)
chr3 (31-186)||(51164986-51165141)
chr3 (59-186)||(54845462-54845589)
chr3 (208-258)||(14756247-14756297)
chr3 (58-169)||(26142950-26143063)
chr3 (72-186)||(54782997-54783111)
chr3 (46-138)||(12745045-12745136)
chr3 (76-186)||(54458271-54458382)
chr3 (84-171)||(55415410-55415497)
chr3 (59-186)||(44234124-44234250)
chr3 (45-171)||(27152910-27153036)
chr3 (53-180)||(8706190-8706315)
chr3 (53-180)||(9058077-9058202)
chr3 (55-186)||(44218976-44219106)
chr3 (40-137)||(11529003-11529103)
chr3 (124-186)||(11529122-11529184)
chr3 (47-124)||(22202301-22202378)
chr3 (67-186)||(46194160-46194279)
chr3 (72-186)||(9218179-9218293)
chr3 (127-186)||(22202403-22202462)
chr3 (72-186)||(39329709-39329823)
chr3 (67-186)||(54021412-54021531)
chr3 (77-143)||(29526066-29526132)
chr3 (58-184)||(38600751-38600877)
chr3 (134-186)||(29858886-29858938)
chr3 (40-140)||(49408589-49408689)
chr3 (78-186)||(53754029-53754137)
chr3 (72-151)||(17274750-17274829)
chr3 (40-186)||(41031606-41031755)
chr3 (72-186)||(42547065-42547179)
chr3 (40-122)||(4980713-4980794)
chr3 (124-186)||(26832105-26832167)
chr3 (132-186)||(48744293-48744347)
chr3 (157-186)||(1923124-1923153)
chr3 (53-122)||(22756175-22756244)
chr3 (108-185)||(46627920-46627997)
chr3 (157-186)||(49122178-49122207)
[»] chr4 (77 HSPs)
chr4 (45-186)||(4360340-4360481)
chr4 (46-186)||(8295063-8295203)
chr4 (46-186)||(42024134-42024274)
chr4 (47-186)||(33047526-33047665)
chr4 (47-186)||(37309732-37309871)
chr4 (47-186)||(22872320-22872461)
chr4 (75-186)||(27977181-27977292)
chr4 (31-186)||(48400549-48400704)
chr4 (46-186)||(41203771-41203911)
chr4 (55-186)||(49448875-49449004)
chr4 (67-186)||(18849713-18849832)
chr4 (46-186)||(39976327-39976463)
chr4 (72-186)||(49306621-49306735)
chr4 (46-171)||(45290086-45290210)
chr4 (46-186)||(41710077-41710217)
chr4 (59-186)||(34021071-34021198)
chr4 (43-186)||(38160082-38160225)
chr4 (45-186)||(38977025-38977167)
chr4 (72-186)||(41436515-41436629)
chr4 (65-186)||(1825198-1825321)
chr4 (54-186)||(17237077-17237209)
chr4 (46-186)||(39258203-39258345)
chr4 (41-186)||(39979814-39979959)
chr4 (46-186)||(283410-283550)
chr4 (74-186)||(42185757-42185869)
chr4 (102-186)||(42544243-42544327)
chr4 (59-178)||(26185224-26185343)
chr4 (31-182)||(49812267-49812418)
chr4 (54-184)||(28974342-28974472)
chr4 (63-153)||(42670333-42670423)
chr4 (35-171)||(21240942-21241079)
chr4 (81-186)||(54729452-54729557)
chr4 (47-186)||(4357602-4357740)
chr4 (61-186)||(43334971-43335096)
chr4 (35-186)||(43421334-43421478)
chr4 (47-186)||(16493232-16493369)
chr4 (48-186)||(28330828-28330967)
chr4 (46-181)||(35909506-35909641)
chr4 (67-186)||(3686045-3686166)
chr4 (78-180)||(4727561-4727662)
chr4 (77-186)||(38319945-38320055)
chr4 (60-186)||(52676978-52677104)
chr4 (80-184)||(18509877-18509982)
chr4 (102-186)||(9093751-9093835)
chr4 (72-186)||(34790910-34791025)
chr4 (59-186)||(39052847-39052974)
chr4 (41-186)||(40020873-40021021)
chr4 (65-181)||(31862828-31862944)
chr4 (63-186)||(37315871-37315995)
chr4 (103-186)||(26799206-26799289)
chr4 (46-186)||(30568693-30568837)
chr4 (67-186)||(32559197-32559316)
chr4 (77-140)||(42367869-42367932)
chr4 (60-186)||(47277628-47277755)
chr4 (47-186)||(47787781-47787920)
chr4 (48-186)||(35998052-35998190)
chr4 (64-186)||(42132847-42132972)
chr4 (136-186)||(48740554-48740604)
chr4 (77-186)||(53848680-53848790)
chr4 (46-119)||(27655237-27655310)
chr4 (31-143)||(2906740-2906852)
chr4 (63-184)||(8065569-8065698)
chr4 (58-186)||(27790366-27790493)
chr4 (72-186)||(44020728-44020835)
chr4 (134-186)||(50328092-50328144)
chr4 (55-186)||(10309195-10309328)
chr4 (47-130)||(12619778-12619860)
chr4 (72-186)||(25149485-25149600)
chr4 (47-186)||(50714616-50714755)
chr4 (48-95)||(55360283-55360330)
chr4 (136-186)||(29644389-29644439)
chr4 (124-186)||(36047111-36047173)
chr4 (69-122)||(38310316-38310367)
chr4 (157-186)||(8759813-8759842)
chr4 (157-186)||(22020554-22020583)
chr4 (137-186)||(51527452-51527501)
chr4 (78-186)||(42051621-42051729)
[»] chr8 (67 HSPs)
chr8 (46-186)||(5392083-5392223)
chr8 (49-186)||(139056-139193)
chr8 (42-186)||(42412312-42412456)
chr8 (46-186)||(28802801-28802941)
chr8 (46-186)||(29615832-29615972)
chr8 (35-180)||(29730816-29730963)
chr8 (40-186)||(3384568-3384716)
chr8 (31-186)||(38252355-38252511)
chr8 (31-186)||(42558501-42558654)
chr8 (46-186)||(21587311-21587447)
chr8 (53-186)||(32241364-32241497)
chr8 (65-186)||(44790374-44790495)
chr8 (47-186)||(33190843-33190982)
chr8 (40-186)||(32967204-32967350)
chr8 (67-186)||(5962427-5962546)
chr8 (45-163)||(4480402-4480519)
chr8 (46-186)||(22324888-22325028)
chr8 (45-186)||(12653721-12653862)
chr8 (77-186)||(15559094-15559203)
chr8 (45-186)||(45197645-45197785)
chr8 (47-180)||(7042792-7042927)
chr8 (103-178)||(9014745-9014820)
chr8 (31-186)||(33746137-33746292)
chr8 (60-186)||(27868272-27868398)
chr8 (60-186)||(27973633-27973759)
chr8 (60-186)||(28030902-28031028)
chr8 (105-179)||(31132771-31132845)
chr8 (48-186)||(39998197-39998335)
chr8 (88-186)||(45425519-45425617)
chr8 (65-186)||(31410560-31410681)
chr8 (65-186)||(39171577-39171697)
chr8 (46-186)||(34133161-34133299)
chr8 (72-186)||(2195502-2195616)
chr8 (45-183)||(12957912-12958051)
chr8 (64-186)||(14689994-14690117)
chr8 (48-181)||(1494182-1494316)
chr8 (37-186)||(2349384-2349534)
chr8 (48-186)||(7258302-7258440)
chr8 (84-186)||(25174556-25174658)
chr8 (33-122)||(37219681-37219770)
chr8 (75-186)||(40077712-40077823)
chr8 (47-149)||(6437951-6438053)
chr8 (64-186)||(8394203-8394328)
chr8 (64-186)||(14748654-14748779)
chr8 (67-180)||(26677113-26677227)
chr8 (40-186)||(36649644-36649789)
chr8 (132-186)||(44615384-44615438)
chr8 (46-186)||(138633-138772)
chr8 (76-186)||(2119750-2119857)
chr8 (47-143)||(40316523-40316619)
chr8 (79-186)||(4274265-4274372)
chr8 (59-122)||(37703085-37703148)
chr8 (133-186)||(1230383-1230435)
chr8 (47-95)||(3442607-3442655)
chr8 (84-180)||(13084919-13085015)
chr8 (66-186)||(28791342-28791462)
chr8 (66-186)||(29638335-29638455)
chr8 (40-139)||(33508830-33508929)
chr8 (72-186)||(5423123-5423237)
chr8 (134-184)||(32472130-32472180)
chr8 (65-186)||(33743810-33743932)
chr8 (53-178)||(39416352-39416477)
chr8 (157-186)||(2797074-2797103)
chr8 (157-186)||(2875130-2875159)
chr8 (157-186)||(17005979-17006008)
chr8 (157-186)||(17571240-17571269)
chr8 (48-117)||(37459444-37459513)
[»] chr7 (52 HSPs)
chr7 (46-186)||(37490551-37490691)
chr7 (46-179)||(11616603-11616735)
chr7 (46-186)||(2846609-2846749)
chr7 (47-186)||(7425811-7425951)
chr7 (46-183)||(44604411-44604547)
chr7 (47-169)||(27234554-27234675)
chr7 (46-186)||(29257581-29257721)
chr7 (43-186)||(29434511-29434653)
chr7 (63-186)||(30463050-30463173)
chr7 (46-186)||(46095354-46095493)
chr7 (60-186)||(32776017-32776144)
chr7 (48-186)||(32971952-32972091)
chr7 (63-186)||(49100453-49100575)
chr7 (65-186)||(5724660-5724780)
chr7 (46-186)||(33584597-33584735)
chr7 (63-186)||(36117695-36117819)
chr7 (63-183)||(47454041-47454161)
chr7 (72-186)||(38181833-38181947)
chr7 (47-143)||(45890792-45890888)
chr7 (79-186)||(2842018-2842125)
chr7 (47-186)||(17266061-17266199)
chr7 (66-181)||(23058858-23058972)
chr7 (46-186)||(23186083-23186216)
chr7 (79-180)||(18235230-18235331)
chr7 (109-186)||(21387476-21387553)
chr7 (48-183)||(31549557-31549692)
chr7 (48-114)||(26296139-26296205)
chr7 (45-186)||(34001793-34001932)
chr7 (48-172)||(47238265-47238390)
chr7 (102-186)||(1643327-1643411)
chr7 (66-186)||(2849289-2849409)
chr7 (65-186)||(33773995-33774116)
chr7 (65-143)||(42122250-42122328)
chr7 (64-183)||(29996979-29997099)
chr7 (60-186)||(37264347-37264472)
chr7 (102-186)||(38589768-38589852)
chr7 (66-186)||(45218111-45218231)
chr7 (47-109)||(1643252-1643314)
chr7 (60-129)||(3781127-3781196)
chr7 (137-186)||(6591565-6591614)
chr7 (47-183)||(23111022-23111159)
chr7 (65-180)||(8149999-8150114)
chr7 (132-184)||(40590844-40590896)
chr7 (48-150)||(21446506-21446609)
chr7 (64-186)||(31581396-31581516)
chr7 (72-186)||(34064249-34064363)
chr7 (64-149)||(27621908-27621994)
chr7 (76-153)||(5083435-5083512)
chr7 (157-186)||(10355779-10355808)
chr7 (102-186)||(19687993-19688077)
chr7 (102-186)||(23703950-23704034)
chr7 (51-186)||(39498708-39498845)
[»] chr5 (59 HSPs)
chr5 (47-186)||(35646024-35646163)
chr5 (41-186)||(36469023-36469168)
chr5 (47-186)||(24231044-24231180)
chr5 (47-186)||(42575573-42575712)
chr5 (40-186)||(17242882-17243028)
chr5 (41-186)||(36446617-36446761)
chr5 (46-186)||(858369-858509)
chr5 (42-186)||(39183557-39183701)
chr5 (47-186)||(35334461-35334600)
chr5 (45-186)||(33988234-33988375)
chr5 (46-186)||(3725220-3725360)
chr5 (64-186)||(11099429-11099551)
chr5 (68-186)||(22582828-22582945)
chr5 (65-186)||(7613741-7613862)
chr5 (31-186)||(42211367-42211518)
chr5 (46-186)||(16283521-16283661)
chr5 (48-186)||(6610871-6611009)
chr5 (47-186)||(39008162-39008305)
chr5 (97-186)||(8369681-8369770)
chr5 (46-186)||(25814398-25814538)
chr5 (48-186)||(7311118-7311254)
chr5 (46-161)||(15814701-15814816)
chr5 (72-186)||(8692778-8692892)
chr5 (60-181)||(32539701-32539822)
chr5 (46-186)||(33012388-33012528)
chr5 (58-182)||(39060368-39060492)
chr5 (48-186)||(5147431-5147570)
chr5 (48-186)||(31090338-31090477)
chr5 (48-186)||(38978938-38979077)
chr5 (59-170)||(41594794-41594904)
chr5 (39-186)||(25344667-25344812)
chr5 (47-186)||(26330282-26330416)
chr5 (64-185)||(42818938-42819060)
chr5 (58-186)||(35585562-35585690)
chr5 (63-186)||(15254799-15254922)
chr5 (31-150)||(41184730-41184849)
chr5 (48-186)||(6172916-6173054)
chr5 (58-182)||(5357763-5357887)
chr5 (63-186)||(13016314-13016437)
chr5 (63-186)||(13087692-13087815)
chr5 (102-186)||(15898225-15898309)
chr5 (48-186)||(4044414-4044551)
chr5 (60-183)||(4576358-4576480)
chr5 (103-186)||(9426543-9426626)
chr5 (47-186)||(13135787-13135916)
chr5 (52-186)||(15564832-15564962)
chr5 (66-177)||(4194975-4195088)
chr5 (132-186)||(6735377-6735431)
chr5 (31-186)||(20189926-20190080)
chr5 (64-141)||(28057782-28057859)
chr5 (64-183)||(35666922-35667039)
chr5 (60-186)||(16926036-16926165)
chr5 (66-186)||(36006849-36006966)
chr5 (157-186)||(39060999-39061028)
chr5 (157-186)||(39212596-39212625)
chr5 (86-186)||(146675-146774)
chr5 (81-165)||(4412436-4412520)
chr5 (46-90)||(27902654-27902698)
chr5 (67-115)||(42870939-42870987)
[»] chr1 (80 HSPs)
chr1 (31-186)||(42926168-42926323)
chr1 (37-171)||(49944981-49945115)
chr1 (41-186)||(27391381-27391526)
chr1 (30-186)||(5040493-5040649)
chr1 (46-186)||(8327751-8327891)
chr1 (46-186)||(32348252-32348392)
chr1 (46-186)||(13500661-13500803)
chr1 (31-186)||(28839373-28839528)
chr1 (65-186)||(5442374-5442495)
chr1 (46-181)||(8773281-8773417)
chr1 (46-186)||(51749117-51749257)
chr1 (31-186)||(36467114-36467269)
chr1 (46-186)||(45889181-45889322)
chr1 (46-186)||(7785205-7785348)
chr1 (54-186)||(46880449-46880581)
chr1 (63-186)||(49494114-49494237)
chr1 (46-186)||(3555489-3555629)
chr1 (47-186)||(17342862-17343007)
chr1 (46-186)||(50267372-50267512)
chr1 (47-186)||(46536374-46536513)
chr1 (48-186)||(17724650-17724788)
chr1 (31-186)||(21304418-21304575)
chr1 (64-186)||(32587799-32587921)
chr1 (60-186)||(34813951-34814077)
chr1 (63-186)||(52830365-52830488)
chr1 (48-182)||(16040115-16040249)
chr1 (40-186)||(40061843-40061989)
chr1 (41-155)||(28908152-28908268)
chr1 (53-186)||(40019793-40019926)
chr1 (63-186)||(29756092-29756216)
chr1 (45-184)||(19532853-19532991)
chr1 (63-186)||(43895881-43896003)
chr1 (47-186)||(52432346-52432485)
chr1 (48-186)||(37925177-37925320)
chr1 (33-186)||(46496052-46496203)
chr1 (67-186)||(10370139-10370257)
chr1 (63-186)||(26924070-26924194)
chr1 (66-186)||(27209921-27210041)
chr1 (53-186)||(29225345-29225482)
chr1 (64-186)||(26583762-26583885)
chr1 (60-186)||(3718798-3718923)
chr1 (48-182)||(4466090-4466224)
chr1 (48-186)||(24131336-24131474)
chr1 (87-186)||(26756010-26756109)
chr1 (64-186)||(28276987-28277112)
chr1 (45-186)||(948518-948661)
chr1 (92-186)||(30749965-30750059)
chr1 (92-186)||(30771416-30771510)
chr1 (108-186)||(36784348-36784426)
chr1 (81-186)||(48242559-48242664)
chr1 (44-186)||(38664435-38664578)
chr1 (64-179)||(50926788-50926904)
chr1 (64-179)||(6787288-6787403)
chr1 (127-182)||(25842637-25842692)
chr1 (103-186)||(27831880-27831963)
chr1 (54-113)||(34332217-34332276)
chr1 (48-186)||(37541048-37541187)
chr1 (47-121)||(11324332-11324406)
chr1 (48-182)||(11425805-11425939)
chr1 (47-121)||(11482353-11482427)
chr1 (46-100)||(30750444-30750498)
chr1 (46-100)||(30752255-30752309)
chr1 (74-186)||(705310-705423)
chr1 (127-184)||(30903242-30903299)
chr1 (72-120)||(5359240-5359288)
chr1 (134-186)||(12267653-12267705)
chr1 (48-120)||(28706559-28706631)
chr1 (102-186)||(33149307-33149391)
chr1 (127-182)||(25869721-25869776)
chr1 (64-150)||(26760346-26760433)
chr1 (103-186)||(31798452-31798535)
chr1 (74-186)||(51848654-51848768)
chr1 (157-186)||(2886205-2886234)
chr1 (157-186)||(27932878-27932907)
chr1 (157-186)||(29225787-29225816)
chr1 (78-115)||(31634261-31634298)
chr1 (157-186)||(45305887-45305916)
chr1 (48-112)||(21304743-21304807)
chr1 (63-155)||(27698869-27698961)
chr1 (64-186)||(46363361-46363485)
[»] chr2 (65 HSPs)
chr2 (46-171)||(565138-565263)
chr2 (47-186)||(28572242-28572380)
chr2 (73-186)||(44534443-44534556)
chr2 (47-182)||(2882023-2882159)
chr2 (31-179)||(3123687-3123835)
chr2 (31-186)||(9724912-9725067)
chr2 (47-186)||(28526998-28527137)
chr2 (46-186)||(28301468-28301608)
chr2 (40-186)||(7649902-7650048)
chr2 (56-179)||(33602169-33602292)
chr2 (31-186)||(43077644-43077799)
chr2 (47-137)||(45464149-45464239)
chr2 (63-186)||(23684993-23685116)
chr2 (72-186)||(18181172-18181286)
chr2 (64-186)||(28925799-28925921)
chr2 (40-186)||(41436113-41436258)
chr2 (31-186)||(13375106-13375263)
chr2 (48-186)||(2048326-2048464)
chr2 (48-186)||(6213785-6213923)
chr2 (65-186)||(24775762-24775881)
chr2 (64-186)||(28108326-28108448)
chr2 (56-149)||(44736939-44737030)
chr2 (77-186)||(3100434-3100543)
chr2 (48-186)||(4282952-4283092)
chr2 (53-186)||(8550582-8550715)
chr2 (57-186)||(11726666-11726795)
chr2 (45-186)||(37247816-37247957)
chr2 (47-186)||(10069519-10069658)
chr2 (55-186)||(43950390-43950521)
chr2 (46-184)||(33755293-33755431)
chr2 (65-186)||(5211910-5212031)
chr2 (65-186)||(30757520-30757641)
chr2 (57-186)||(39095665-39095794)
chr2 (45-181)||(31545950-31546086)
chr2 (86-186)||(36396431-36396531)
chr2 (31-186)||(7213509-7213664)
chr2 (47-153)||(36155580-36155687)
chr2 (46-186)||(8031775-8031911)
chr2 (45-186)||(10818655-10818797)
chr2 (65-186)||(2756708-2756829)
chr2 (77-186)||(36103265-36103374)
chr2 (66-186)||(18460522-18460642)
chr2 (31-186)||(20027067-20027223)
chr2 (64-186)||(314461-314584)
chr2 (48-186)||(6972475-6972613)
chr2 (63-186)||(435026-435151)
chr2 (64-186)||(26273793-26273915)
chr2 (48-186)||(37529006-37529144)
chr2 (105-186)||(2427394-2427475)
chr2 (67-186)||(13222102-13222222)
chr2 (72-186)||(15859304-15859415)
chr2 (47-95)||(44194794-44194842)
chr2 (46-134)||(24589108-24589197)
chr2 (47-186)||(39159653-39159791)
chr2 (47-186)||(39209403-39209541)
chr2 (65-175)||(38280148-38280258)
chr2 (49-186)||(19515915-19516050)
chr2 (64-141)||(40965093-40965170)
chr2 (73-143)||(10394243-10394313)
chr2 (60-120)||(733958-734019)
chr2 (58-122)||(32556270-32556332)
chr2 (59-95)||(16864880-16864916)
chr2 (102-186)||(31348545-31348629)
chr2 (102-186)||(39166685-39166769)
chr2 (39-122)||(41365820-41365901)
[»] scaffold0034 (1 HSPs)
scaffold0034 (46-186)||(98859-98999)
[»] chr6 (24 HSPs)
chr6 (67-186)||(31265813-31265932)
chr6 (65-186)||(3604552-3604673)
chr6 (31-186)||(34915729-34915886)
chr6 (63-186)||(15081457-15081580)
chr6 (65-186)||(9755099-9755220)
chr6 (48-186)||(33921404-33921542)
chr6 (47-186)||(4238455-4238592)
chr6 (46-186)||(33109407-33109547)
chr6 (75-186)||(30063911-30064022)
chr6 (67-186)||(7301036-7301153)
chr6 (40-186)||(7739445-7739591)
chr6 (45-186)||(14312580-14312721)
chr6 (48-179)||(9354375-9354506)
chr6 (48-186)||(15371798-15371936)
chr6 (47-171)||(8569575-8569695)
chr6 (45-171)||(14306173-14306299)
chr6 (77-186)||(15321189-15321298)
chr6 (84-186)||(28539030-28539131)
chr6 (65-186)||(15355609-15355730)
chr6 (78-122)||(178949-178991)
chr6 (106-186)||(117113-117193)
chr6 (64-143)||(2657978-2658060)
chr6 (53-113)||(25399082-25399142)
chr6 (134-186)||(33017965-33018017)
[»] scaffold0006 (1 HSPs)
scaffold0006 (72-186)||(229857-229970)
[»] scaffold0058 (1 HSPs)
scaffold0058 (46-186)||(14490-14630)
[»] scaffold0321 (1 HSPs)
scaffold0321 (46-178)||(9486-9617)
[»] scaffold0221 (2 HSPs)
scaffold0221 (31-186)||(10707-10864)
scaffold0221 (136-186)||(8921-8971)
[»] scaffold0028 (1 HSPs)
scaffold0028 (74-186)||(26647-26752)
[»] scaffold0003 (1 HSPs)
scaffold0003 (65-186)||(352415-352534)
[»] scaffold0086 (1 HSPs)
scaffold0086 (50-186)||(5852-5986)
[»] scaffold0227 (1 HSPs)
scaffold0227 (63-122)||(8964-9023)
[»] scaffold0007 (1 HSPs)
scaffold0007 (65-186)||(230290-230410)
[»] scaffold0576 (1 HSPs)
scaffold0576 (65-186)||(599-720)
[»] scaffold0020 (1 HSPs)
scaffold0020 (104-186)||(171260-171342)
[»] scaffold0685 (1 HSPs)
scaffold0685 (66-186)||(6353-6473)
[»] scaffold0001 (1 HSPs)
scaffold0001 (43-115)||(394878-394950)


Alignment Details
Target: chr3 (Bit Score: 146; Significance: 6e-77; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 14756006 - 14756187
Alignment:
Q  5 ccaccgaccaacctgtcactacctacactccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgag 104  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  14756006 ccaccgaccaacccgtcactacctacactccctctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaaggag 14756105  T
Q  105 agagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||| ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  14756106 agagaaaaataattttaagtgctcttgttaagtactggtacattctccactatcataaatgcaaagtagaatatattaaatt 14756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 17776921 - 17777066
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||||||||||||||| |||||  |||| || ||||||||    
T  17776921 gtcccagattaactgagtcatttgctcatttcacacgtattaaaaaaaatgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtat 17777020  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaat 185  Q
    | || |||||||||||  |||||||||||||| |||||||||||||    
T  17777021 ttgtgcattctccactaccataaatgcaaagtggaatatattgaat 17777066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 19078222 - 19078367
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||||||||||||||| |||||  |||| || ||||||||    
T  19078222 gtcccagattaactgagtcatttgctcatttcacacgtattaaaaaaaatgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtat 19078321  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaat 185  Q
    | || |||||||||||  |||||||||||||| |||||||||||||    
T  19078322 ttgtgcattctccactaccataaatgcaaagtggaatatattgaat 19078367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 2868748 - 2868608
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||| |||||| | || || ||| |||||| | |    
T  2868748 gattaactgagtcatttgctcatttcacacatattaagaaaaatgtataaatgaaggagagagaaaaatggttttaagttcttttgttatgtattgctgc 2868649  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||||| ||||| || |||||    
T  2868648 attctccactgtcataaatgcaaagtggaataaatcgaatt 2868608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 36097588 - 36097728
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||||||||||| | |||||||||||| || |||||| | || |||||||||||||| |||||| | ||||| |||||||| ||| |    
T  36097588 gattaactgagtcatttgctcatttcatacatattaagaagaacgtataaatgaaggagagagaaaaatggttttaagtactcttgttaagtatcggtgc 36097687  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||| | ||||||||||| ||||||||||||||    
T  36097688 attctccactgttagaaatgcaaagtggaatatattgaatt 36097728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 46785906 - 46786054
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaa--gt 137  Q
    ||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||| | |||| |||||| ||||||  |||||| || |||| ||||  ||    
T  46785906 gtcctggattaactgagtcatttactcatttcacatatattaagaaaaatgtattagtaaaggagagaaaaaaatagttttaaatgatcttgttaagtgt 46786005  T
Q  138 attggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||    
T  46786006 attggtatattctccactatcataaatgcaaagtgaaatatattgaatt 46786054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 11251079 - 11251183
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||| |||||||||||||||||||| | ||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||    
T  11251079 tcatttcacatatattaagaaaaatgtataaatgaatgagagaaaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaat 11251178  T
Q  165 gcaaa 169  Q
    |||||    
T  11251179 gcaaa 11251183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 54122142 - 54122297
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| ||||||||  |||| ||||| |||||  |||||| ||||||||||||| |||||||||| | || |||||||||||||  |||||| || | ||    
T  54122142 actccctctgtcctgaattagctgagccattttttcatttcacacatattaagacaaatgtataaatgaaggagagagaaaaatagttttaaatgttttt 54122241  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||||||||||| ||||||||||| |||||||||||||||  |||||||||||||    
T  54122242 gttaagtattggtgcattctccactatcataaatgcaaagtgaaatatattgaatt 54122297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 21296462 - 21296576
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||| ||||| |||||||||| | || ||||||| ||||||||||||| ||||||| |||||||||||| |||| | |||| |||||||||||||||    
T  21296462 acacatactaagacaaatgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatttttcactatcataaatgcaaagt 21296561  T
Q  172 agaatatattgaatt 186  Q
    |||||||||||||||    
T  21296562 agaatatattgaatt 21296576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 9017976 - 9017835
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||| ||||||   |||||||| ||||||||||| |||||||||||| | || |||||||||||||  |||||| |||| || ||||||||||||     
T  9017976 agattaaccgagtcaaaagctcatttcacacatattaaaaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtg 9017877  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||| | |||||||||||||  |||||||||||||    
T  9017876 cattctccactattataaatgcaaagtgaaatatattgaatt 9017835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 33994814 - 33994693
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||| ||| ||||||||||||||| | || ||||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||| ||||||    
T  33994814 gctcatttcacacgtatcaagaaaaatgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgcattctccactatcataa 33994715  T
Q  163 atgcaaagtagaatatattgaa 184  Q
    ||| ||||| ||||||||||||    
T  33994714 atgtaaagtggaatatattgaa 33994693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 10855168 - 10855028
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||| || ||||||||| |||||| |||| |||||||| |||||||||| | || |||||||||||||  |||||| || | |||||| |||||||| |    
T  10855168 gattatcttagtcatttgatcatttcacacgtattaagataaatgtataaatgaaggagagagaaaaatagttttaagtgtttttattatgtattggtgc 10855069  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||| ||||||||||||||| ||||||||||||||    
T  10855068 attatccactctcataaatgcaaagtggaatatattgaatt 10855028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 5245601 - 5245446
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || |||| |||||||||||| ||||||||||  | | ||||||||||| |||||||||  | || |||||||||||||  |||||| |||||||    
T  5245601 actccctccgtcccagattaactgagccatttgctcaaatcatacatattaagacaaatgtatacatgaaggagagagaaaaatagttttaagtgctctt 5245502  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||||||||||||  |||||||| | |||||||| |||||| ||||||||||||||    
T  5245501 gttaagtattggtgtattctccaatatcataaatacaaagtggaatatattgaatt 5245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 52325366 - 52325211
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    |||||||| ||||  ||||||||||||| ||| || ||||||||| ||||||||||||||||||| |||| |||| ||||||| | |||| | || | ||    
T  52325366 actccatccgtcccggattaactgagtcgtttacttattttacacgtattaagaaaaatgtataaataaaggagatagaaaaagggtttttagtgttatt 52325267  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||| |||||||| |||||| | || ||||||||||||||| ||||||||||||||    
T  52325266 gttatgtattggtgcattctacgctatcataaatgcaaagtggaatatattgaatt 52325211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 26134636 - 26134776
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||| ||  |||||||||  | ||||||||||||| |||||||||| | || |||||||||||||  |||||| ||||||| ||||||||| ||      
T  26134636 gattaactaagctatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaattgttttaagtgctcttgttaagtattagtct 26134735  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| |||||||||||||||  |||||||||||||    
T  26134736 attctccactatcataaatgcaaagtgaaatatattgaatt 26134776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 15280778 - 15280639
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||||||||  | ||||||||||||| |||||||||| | || |||||| |||||||||||||| ||| ||| || | || | ||      
T  15280778 gattaactgagtcatttgctcaaatcacacatattaagataaatgtataaatgaaggagagataaaaatgattttaagtgcacttgttcacta-tcgtgt 15280680  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||| ||||| ||||||||||||||    
T  15280679 attctccactatcataaatggaaagtggaatatattgaatt 15280639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 32023054 - 32023174
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatga-ttttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||||||||||||||| ||||||||||| | || |||| |||||||| | |||||| | || || |||||||||||| ||||||||||| | |||||||    
T  32023054 attttacacatattaaggaaaatgtataaatgaaggagatagaaaaataagttttaagtacttttgttaagtattggtgcattctccactattataaatg 32023153  T
Q  166 caaagtagaatatattgaatt 186  Q
    |||||| ||||||||||||||    
T  32023154 caaagttgaatatattgaatt 32023174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 1772073 - 1772164
Alignment:
Q  80 taagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||||||||||||||| |||| |||||||||||||| |||||| || |||| ||||||||||||| |||||||||| ||||||| |||||||    
T  1772073 taagaaaaatgtataaataaaggagagagaaaaatggttttaagtgttcttgttaagtattggtatattctccactatcataaaagcaaagt 1772164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 53876370 - 53876509
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||||||||||| | |||| | | |||||||||||||||||||| | || ||| || |||||||||||||| |||| || |||| |||| || ||    
T  53876370 attaactgagtcatttgtttatttcatagatattaagaaaaatgtataaatgaaggagtgaaaaaaatgattttaagtgcttttgttaaatatttgtgca 53876469  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |||||| ||||||||| |||||  |||||||||||||    
T  53876470 ttttccactatcataaatgtaaagtgaaatatattgaatt 53876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 1334716 - 1334854
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||||||||| ||||||| ||||| ||||||||||  |||||| | || ||||||||||||| ||||| | |||  |||| |||||||||| |||    
T  1334716 ttaattgagtcattttctcatttcacacagattaagaaaagcgtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcat 1334815  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |  | ||||||||| ||||||||||||||||||||    
T  1334816 tcttctttatcataaatgtaaagtagaatatattgaatt 1334854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 39866504 - 39866626
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||||||||||||||||||||||| | || || ||||||||||  |||||| || | || ||||||||||||  |||||||||| |||||||    
T  39866504 ctcatttcacacatattaagaaaaatgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtattctccactatcataaa 39866603  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    ||||||||  |||| ||||||||    
T  39866604 tgcaaagtgaaatacattgaatt 39866626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 43639475 - 43639589
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||||||||| |||| ||||| | || |||||||||||||| |||||| |||| || |||||||||| | |||| |||||| |||||||||||||||    
T  43639475 acacatattaagacaaatatataaatgaaggagagagaaaaatggttttaagtgctgttgttaagtattgatgcattttccactatcataaatgcaaagt 43639574  T
Q  172 agaatatattgaatt 186  Q
      |||||||||||||    
T  43639575 gaaatatattgaatt 43639589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 32827256 - 32827377
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| ||||||||||||||||||| | || |||||| ||||||  |||||| ||| ||| ||| |||||||| ||||||||||| ||||||||    
T  32827256 tcatttcacacgtattaagaaaaatgtataaatgaaggagagaaaaaaatagttttaagtgcacttgttacgtattggtgcattctccactatcataaat 32827355  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | |||||  |||||||||||||    
T  32827356 gtaaagtgaaatatattgaatt 32827377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 39364971 - 39365068
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaa-tgattttaactgctcttattaagtattggt 143  Q
    |||| ||||| || |||||||||| |||||||||||||||||||||||| |||| |||||||||||| || |||||| ||||||| ||||||||||||    
T  39364971 attagctgagccacttgctcatttcacacatattaagaaaaatgtataaataaaggagagagaaaaagtggttttaagtgctcttgttaagtattggt 39365068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 15082176 - 15082036
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||| |||||||||||||||||| ||| || |||||||||| ||||||| ||||| ||||||||| ||| |||||| ||||||  |||| ||||||| |    
T  15082176 attaattgagtcatttgctcatttcacaaatgttaagaaaaattgtataaataaataagagagaaatatggttttaagtgctctctttaaatattggtgc 15082077  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | ||||||| ||||| |  |||||||| ||||    
T  15082076 attctccattatcataaaagcaaaatgaaatatattaaatt 15082036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 51165141 - 51164986
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || |||| || |||| |||| ||||| || |||| ||||| |||||||||| ||||||| |||| ||||||||||||| ||||| | ||   ||    
T  51165141 actccctccgtccgagtttaattgagccattttctgatttcacacaaattaagaaaagtgtataaataaaagagagagaaaaataattttgagtgtcttt 51165042  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |||||||||| |||||| |  | ||||||||| ||||||||||||||||||||    
T  51165041 atcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 51164986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 54845462 - 54845589
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    |||||||||||||| ||||||||||||| |||||||| | || |||||||||||||  |||||| || | || ||||| || | | ||||||| | | ||    
T  54845462 atttgctcattttatacatattaagaaatatgtataaatgaaggagagagaaaaatagttttaagtgtttttgttaaggatcgatgcattctctagtatc 54845561  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||| ||||||||||||||    
T  54845562 ataaatgcaaagtggaatatattgaatt 54845589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 14756247 - 14756297
Alignment:
Q  208 ttcccatttgacaattctatacaagggcacaaggccacccgggtgtgtcag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14756247 ttcccatttgacaattctatacaagggcacaaggccacccgggtgtgtcag 14756297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 26143063 - 26142950
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattt--taactgctcttattaagtattggtacattctccact 155  Q
    ||||| ||||||| ||||||||||||| |||||||||| |||| ||||||||||| || |||  ||  | ||||| |||||||||||| |||||||||||    
T  26143063 cattttctcatttcacacatattaagacaaatgtataaataaaggagagagaaaattggttttataggttctctttttaagtattggtgcattctccact 26142964  T
Q  156 gtcataaatgcaaa 169  Q
     |||||||||||||    
T  26142963 atcataaatgcaaa 26142950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 54783111 - 54782997
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||| ||||||||||||||||||| | ||||||||||||||||  |||||| ||| ||| |||||||||||| |||| | | || ||||||||| |||||    
T  54783111 acacgtattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttcttaagtattggtgcattatgcgctatcataaatgtaaagt 54783012  T
Q  172 agaatatattgaatt 186  Q
      |||||||||||||    
T  54783011 gaaatatattgaatt 54782997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 12745136 - 12745045
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagta 138  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||| | || |||||| ||||||| |||||| ||||||| |||||||    
T  12745136 gattaactgagtcttttgctcatttcacacatattaagaaaaatgt-taaatgaaggagagataaaaatgcttttaagtgctcttgttaagta 12745045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 54458271 - 54458382
Alignment:
Q  76 atattaagaaaaat-gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtaga 174  Q
    |||||||||||||| |||||| ||||  ||| |||||||||||||||| || | || |||||||| ||| ||||||||| | ||||||||| ||||| ||    
T  54458271 atattaagaaaaattgtataaataaagaagatagaaaaatgattttaagtgattttgttaagtatgggtgcattctccattatcataaatgtaaagtgga 54458370  T
Q  175 atatattgaatt 186  Q
    ||||||||||||    
T  54458371 atatattgaatt 54458382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 55415410 - 55415497
Alignment:
Q  84 aaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||||||||||| ||||||||||||||||||| ||||||||| | || |||||||||||| ||||||  ||| |||||||| ||||||    
T  55415410 aaaaatgtataaataaatgagagagaaaaatggttttaactgtttttgttaagtattggtgcattctttactatcataaatacaaagt 55415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 44234250 - 44234124
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    ||||| ||||||||| | ||||||  ||||||||||| | || |||| |||| | ||||||||| || ||||||||||||||||||| |||| || | ||    
T  44234250 atttgttcattttacgcgtattaaagaaaatgtataagtgaaggagatagaaga-tgattttaaatgttcttattaagtattggtacgttcttcattatc 44234152  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
     ||||||||||||  |||||||||||||    
T  44234151 gtaaatgcaaagtgaaatatattgaatt 44234124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 27153036 - 27152910
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||| ||||| |  |  ||| ||||||||  |||||| |||| ||||||| |||| ||     
T  27153036 agattaagtgagtcatttgttcattttacatatattaagaaaaatatataaatgtagaagatagaaaaatatttttaaatgcttttattaaatatttgtg 27152937  T
Q  145 cattctccactgtcataaatgcaaagt 171  Q
    ||||||||||  ||| | |||||||||    
T  27152936 cattctccaccatcaaatatgcaaagt 27152910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 8706315 - 8706190
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaa--tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattct 150  Q
    ||||||||||||| |||| | ||||||||| |||||  ||||||| | ||  ||||||| |||||||||||| ||||||| |||||||||| | ||||||    
T  8706315 tgagtcatttgctgatttcatacatattaaaaaaaaaatgtataaatgaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattct 8706216  T
Q  151 ccactgtcataaatgcaaagtagaatatat 180  Q
     ||    |||||||||||||| ||||||||    
T  8706215 tca----cataaatgcaaagtggaatatat 8706190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 9058202 - 9058077
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaa--tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattct 150  Q
    ||||||||||||| |||| | ||||||||| |||||  ||||||| | ||  ||||||| |||||||||||| ||||||| |||||||||| | ||||||    
T  9058202 tgagtcatttgctgatttcatacatattaaaaaaaaaatgtataaatgaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattct 9058103  T
Q  151 ccactgtcataaatgcaaagtagaatatat 180  Q
     ||    |||||||||||||| ||||||||    
T  9058102 tca----cataaatgcaaagtggaatatat 9058077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 44218976 - 44219106
Alignment:
Q  55 agtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcca 153  Q
    |||| |||| |||||| ||||||||||||||||| ||||||| | || || ||||||||||| |||| | || ||||  ||||| ||||| ||||| |||    
T  44218976 agtcttttgttcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtg-tctt-gtaagtgttggtgcattcccca 44219073  T
Q  154 ctgtcataaatgcaaagtagaatatattgaatt 186  Q
     | |||||||| |||||||||||||||||||||    
T  44219074 ttatcataaatacaaagtagaatatattgaatt 44219106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 11529003 - 11529103
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagag---aaaaatgattttaactgctcttattaag 136  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||||||| ||||| | || || ||||   ||||||| |||||| ||||||| |||||    
T  11529003 gtcccagattaaccgagccatttgctcatttcacacatattaagaaaaatatataaatgaaagaaagagaaaaaaaatggttttaaatgctcttgttaag 11529102  T
Q  137 t 137  Q
    |    
T  11529103 t 11529103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 11529122 - 11529184
Alignment:
Q  124 tgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||||||| ||||    
T  11529122 tgctcttgttaagtattgatacattctccaatatcataaatgcaaagtggaatatattaaatt 11529184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 22202301 - 22202378
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaact 124  Q
    ||||||||||||||||  | |||| ||||||||||||| |||||||||| | || || |||||||||| |||||||||    
T  22202301 attaactgagtcattttttaatttcacacatattaagataaatgtataaatgaaggaaagagaaaaataattttaact 22202378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 46194160 - 46194279
Alignment:
Q  67 attttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    |||| |||| |||||||||||| ||||||| | || ||||||||||||||  ||| | ||| ||||| || | ||||| |||||||   | |||||||||    
T  46194160 atttcacacttattaagaaaaagtgtataagttaaagagagagaaaaatgggtttgagtgcccttatcaactgttggtgcattctctt-tatcataaatg 46194258  T
Q  166 caaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||    
T  46194259 caaagtagaatatattgaatt 46194279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 9218293 - 9218179
Alignment:
Q  72 acacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaag 170  Q
    ||||||||||||||||| ||||||| | || |||||||||||||  |||| | || |||  |||||||||||| ||||||    | ||||||||||||||    
T  9218293 acacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tctcgttaagtattggtgcattctttcttatcataaatgcaaag 9218195  T
Q  171 tagaatatattgaatt 186  Q
    ||||||||| ||||||    
T  9218194 tagaatataatgaatt 9218179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 22202403 - 22202462
Alignment:
Q  127 tcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||||||||||| |||| |||||| ||||||||||||||| ||||||||| ||||    
T  22202403 tcttgttaagtattggtgcattatccactatcataaatgcaaagttgaatatattaaatt 22202462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 39329709 - 39329823
Alignment:
Q  72 acacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaag 170  Q
    ||||||||||||||||| ||||||| | || |||| ||| ||||  |||| | || |||| |||||||||||| ||||||    | ||||||||||||||    
T  39329709 acacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatg-tcttgttaagtattggtgcattctttcttatcataaatgcaaag 39329807  T
Q  171 tagaatatattgaatt 186  Q
    ||||||||||||||||    
T  39329808 tagaatatattgaatt 39329823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 54021412 - 54021531
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgc 166  Q
    |||| ||||| ||| |||||| ||||||| |||| ||||||||||||||||||| | ||   |||| || ||||| | |||||| |  | | |||||||     
T  54021412 atttcacacagattgagaaaagtgtataaataaaagagagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgt 54021511  T
Q  167 aaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||    
T  54021512 aaagtagaatatattgaatt 54021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 29526132 - 29526066
Alignment:
Q  77 tattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    |||||| |||||| ||||| |||| |||||| |||||||||||||| || |||||| ||||||||||    
T  29526132 tattaaaaaaaatatataaataaaagagagataaaaatgattttaaatgttcttatcaagtattggt 29526066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 38600751 - 38600877
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgt 157  Q
    ||||| |||||||  |||| |||||||||| ||||||| | ||  |||||||||||||||||| | | |  |||| |||||||||| |||||| |  |      
T  38600751 cattttctcatttcgcacagattaagaaaagtgtataaatgaaaaagagagaaaaatgattttgagtccctttatcaagtattggtgcattcttctttac 38600850  T
Q  158 cataaatgcaaagtagaatatattgaa 184  Q
    |||||||| |||||| |||||||||||    
T  38600851 cataaatgtaaagtataatatattgaa 38600877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 29858886 - 29858938
Alignment:
Q  134 aagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||| |  | ||||||||| ||||||||||||||||||||    
T  29858886 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 29858938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 49408689 - 49408589
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    ||||| |||||| |||  ||||||||||||| | |||||||||||| ||| ||||| | || || ||||||||||  |||||| || |||| ||||||||    
T  49408689 gtcctggattaattgaaccatttgctcatttcatacatattaagaataatttataaatgaaggaaagagaaaaatagttttaagtgttcttgttaagtat 49408590  T
Q  140 t 140  Q
    |    
T  49408589 t 49408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 53754029 - 53754137
Alignment:
Q  78 attaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaata 177  Q
    ||||| |||| ||||||| | ||  |||||||||||||||||| | ||   ||  ||||||||||| |||||| |  | ||||||||| |||||||||||    
T  53754029 attaaaaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaata 53754128  T
Q  178 tattgaatt 186  Q
    |||||||||    
T  53754129 tattgaatt 53754137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 17274829 - 17274750
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctc 151  Q
    |||||||||||||||||||||||| | || ||| |||||||||  |||||| ||| || ||||| ||||| | |||||||    
T  17274829 acacatattaagaaaaatgtataaatgaaggagggagaaaaatagttttaaatgcactgattaaatattgatgcattctc 17274750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 41031755 - 41031606
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    ||||||||||||||||| ||    ||||||| |||| |||||| |||||||||| |   ||  ||| ||||||||  |||||| ||| ||| ||||||||    
T  41031755 gtcctagattaactgagccaaaatctcatttcacacgtattaaaaaaaatgtatgaaagaagaagaaagaaaaatagttttaagtgcacttgttaagtat 41031656  T
Q  140 tggtacattctccactgtc---ataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||| |||||| ||   ||||||| |||||  |||||||||||||    
T  41031655 tggtgcattttccactatcataataaatgtaaagtgaaatatattgaatt 41031606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 42547065 - 42547179
Alignment:
Q  72 acacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaag 170  Q
    ||||||||||||||||| | ||||| |||| |||||| ||||||  |||| | || |||| |||||||||||| ||||||    | |||||||||||||     
T  42547065 acacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatg-tcttgttaagtattggtgcattctttcttatcataaatgcaaaa 42547163  T
Q  171 tagaatatattgaatt 186  Q
     |||||||||||||||    
T  42547164 gagaatatattgaatt 42547179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 4980713 - 4980794
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    |||| ||||||| ||||| ||||||| |||| ||| |||| |||||||||||| || | |||||||||||||| | |||||||    
T  4980713 gtcccagattaa-tgagttatttgcttatttcacatatatcaagaaaaatgtaaaacttaatgagagagaaaattaattttaa 4980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 26832167 - 26832105
Alignment:
Q  124 tgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||| | ||||||||||   ||||||||||||||  |||||||| ||||    
T  26832167 tgctcttattaagtattgatgcattctccaccaccataaatgcaaagtgaaatatattaaatt 26832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 48744347 - 48744293
Alignment:
Q  132 ttaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| | ||||||||||| ||||||||| |||||  |||||||||||||    
T  48744347 ttaagtattgatgcattctccactatcataaatgtaaagtgaaatatattgaatt 48744293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 1923153 - 1923124
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  1923153 tcataaatgcaaagtagaatatattgaatt 1923124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 22756175 - 22756244
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    ||||||||||| |||||| |||||||||||| ||| ||||||| | || || | |||||||| |||||||    
T  22756175 tgagtcatttgatcatttcacacatattaaggaaattgtataaatgaaagaaatagaaaaataattttaa 22756244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 46627920 - 46627997
Alignment:
Q  108 gaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaat 185  Q
    ||||||||||||||| || |||| | |||||||| |  |||  ||| | |||||||||||||||| ||||||||||||    
T  46627920 gaaaaatgattttaagtgttcttgtcaagtattgatgtatttaccattatcataaatgcaaagtataatatattgaat 46627997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 49122178 - 49122207
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  49122178 tcataaatgcaaagtagaatatattgaatt 49122207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 4360340 - 4360481
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||||| |||||| |||||| ||||||||||||||||| |||||| | ||||| ||||||||||| |||||| |||| || ||||||||||||     
T  4360340 agattaactgagccatttgttcatttcacacatattaagaaaaaagtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtg 4360439  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||  |||||||||||||| ||||||||||||||    
T  4360440 cattctccactagcataaatgcaaagtggaatatattgaatt 4360481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 8295203 - 8295063
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||||| | || |||||||||||||  |||||| | |||||  ||||||||||| |    
T  8295203 gattaactgagccatttgctcatttcacacaaattaagaaaaatgtataaatgaaagagagagaaaaattgttttaagtcctcttgataagtattggtgc 8295104  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| |||||||||||| ||| |||||||||||||    
T  8295103 attctccactatcataaatgcaatgtataatatattgaatt 8295063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 42024134 - 42024274
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||||||||  | ||||||||||||| |||||||||| | || |||||||||||||| |||||||| ||||| ||||||||||||      
T  42024134 gattaactgagccatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaatggttttaactactcttgttaagtattggtct 42024233  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  42024234 attctccactattataaatgcaaagtggaatatattgaatt 42024274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 33047665 - 33047526
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||| |||| |||||||| |||| |||||||||||||||||||  |||  ||||||||||||| |||||| |||| || ||||||||||||| |    
T  33047665 attaactgagccattagctcatttcacacctattaagaaaaatgtataaacaaagaagagagaaaaatggttttaagtgcttttgttaagtattggtaga 33047566  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| |||||||| |||||| ||||||||||||||    
T  33047565 ttctccactatcataaatacaaagtggaatatattgaatt 33047526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 37309871 - 37309732
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||| || |||||||||| | | ||||||||||||||| |||| |||||||||||||||||||| ||||| || |||| |||||||||| | ||    
T  37309871 attaactgagccacttgctcatttcatatatattaagaaaaatgcataaataaatgagagagaaaaatgactttaattgttcttgttaagtattgatgca 37309772  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||| ||| |||||||||||||||  |||||||||||||    
T  37309771 ttctctactatcataaatgcaaagttaaatatattgaatt 37309732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 22872320 - 22872461
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctc--ttattaagtattggta 144  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||| | ||  ||||||||||||| |||||| |||||  || | ||||||||||     
T  22872320 attaagtgagccatttgctcatttcacacatattaagaaaaatgtataagtgaagaagagagaaaaatggttttaagtgctcgtttgtcaagtattggtg 22872419  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| | ||||||||||||||| ||||||||||||||    
T  22872420 cattctccattatcataaatgcaaagtggaatatattgaatt 22872461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 27977292 - 27977181
Alignment:
Q  75 catattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtaga 174  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||| || | || |||||||||||| ||||||||||| | ||||||||||||| ||    
T  27977292 catattaagaaaaatgtataaataaattagagtgaaaaatgattttaagtgtttttgttaagtattggtgcattctccactattataaatgcaaagtgga 27977193  T
Q  175 atatattgaatt 186  Q
    ||||||||||||    
T  27977192 atatattgaatt 27977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 48400549 - 48400704
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || ||||||| |||| |||||||||| ||||||| ||||| |||||||||||||||||| | || ||||||||||||||||||| | |||| ||    
T  48400549 actccctccgtcctagtttaattgagtcattttctcatttcacacagattaagaaaaatgtataaatgaaagagagagaaaaatgatttttaatgctttt 48400648  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |||||||| |  ||||| |  | ||||||||| ||||||||||||||||||||    
T  48400649 atcaagtattgatgtattcttctttatcataaatgtaaagtagaatatattgaatt 48400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 41203911 - 41203771
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||| |||||||||||| ||| |||| ||||||||||||||||||| | || |||| ||||||||| |||| | ||||||| |||||||||| | |    
T  41203911 gattaactaagtcatttgctcgtttcacacgtattaagaaaaatgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgc 41203812  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||| ||||  ||||||| |||||| ||||||||||||||    
T  41203811 attcttcactaccataaatacaaagtggaatatattgaatt 41203771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 186
Target Start/End: Complemental strand, 49449004 - 49448875
Alignment:
Q  55 agtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccac 154  Q
    ||||||||| ||||||  ||||||||||||||||||||||| | || |||||||||||||| |||||| ||||||| | ||||||| || ||||||| |     
T  49449004 agtcatttgttcattt--cacatattaagaaaaatgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctat 49448907  T
Q  155 tgtcataaatgcaaagtagaatatattgaatt 186  Q
    | |||||||||||||||| |||||||||||||    
T  49448906 tatcataaatgcaaagtataatatattgaatt 49448875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 18849713 - 18849832
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgc 166  Q
    |||| ||||||||||||| |||||||||| | || |||| ||||| ||| |||||| ||||||| |||||||||||| ||||||||||| ||||||||||    
T  18849713 atttcacacatattaagacaaatgtataaatgaaggagaaagaaatatggttttaagtgctcttgttaagtattggtgcattctccactatcataaatgc 18849812  T
Q  167 aaagtagaatatattgaatt 186  Q
    |||||  |||||||||||||    
T  18849813 aaagtgaaatatattgaatt 18849832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 39976327 - 39976463
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||||||||||| |||||| | |||||||||||| || |||||| | || |||||||||    | |||||| ||||||| |||||||||||| |    
T  39976327 gattaactgagtcatttgttcatttcatacatattaagaagaacgtataaatgaaggagagagaa----ggttttaagtgctcttgttaagtattggtgc 39976422  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||| | ||||||||||| ||||||||||||||    
T  39976423 attctccactgttagaaatgcaaagtggaatatattgaatt 39976463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 49306735 - 49306621
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||||| |||||| |||||||||| | || |||||||||||||| |||||| ||||||| ||||||||||||  ||||||| || |||||||||||||||    
T  49306735 acacattttaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaagt 49306636  T
Q  172 agaatatattgaatt 186  Q
     ||||||||||||||    
T  49306635 ggaatatattgaatt 49306621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 45290210 - 45290086
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||  |||||| |||| ||  |||||||||||      
T  45290210 gattaactaagtcatttgctcatttaacacatattaagaaaaatgtataaataaaggagagggaaaaatagttttaagtgctatt-ctaagtattggtgt 45290112  T
Q  146 attctccactgtcataaatgcaaagt 171  Q
    |||||||||| || ||||||||||||    
T  45290111 attctccactatcgtaaatgcaaagt 45290086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 41710077 - 41710217
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||| ||| ||||||||||  | ||||||||||||| |||||||||| | ||  ||||| ||||||| |||||| ||||||| |||| |||||||      
T  41710077 gattaaccgagccatttgctcaaatcacacatattaagacaaatgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggtct 41710176  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||| ||||||||||||||| ||||||||||||||    
T  41710177 attttccactatcataaatgcaaagtggaatatattgaatt 41710217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 34021198 - 34021071
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    |||||||||||| ||||||||| ||| |||||||||| |||| ||||||||||||| ||||| | || |||| ||  |||||||| ||||||| ||| ||    
T  34021198 atttgctcatttcacacatattgagacaaatgtataaataaaggagagagaaaaataattttcagtgttcttgttcggtattggtgcattctctactatc 34021099  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||  |||||||||||||    
T  34021098 ataaatgcaaagtctaatatattgaatt 34021071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 38160082 - 38160225
Alignment:
Q  43 ctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattgg 142  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||  |||||| ||   || | || |||||     
T  38160082 ctagattaagtgagtcatttgctcattttatatatattaagaaaaatgtataaataaaggagagagaaaaattgttttaagtgtctttgtcaaatattga 38160181  T
Q  143 tacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | ||||||||| | |||||||| ||||||  |||||||||||||    
T  38160182 tgcattctccattatcataaatacaaagtgaaatatattgaatt 38160225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 38977167 - 38977025
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||||| ||   ||||||||||||| ||||||||||||||||||| | ||  ||||||||||||  |||||| ||| ||| ||||||||||||     
T  38977167 agattaactgagccaaaagctcattttacacgtattaagaaaaatgtataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtg 38977068  T
Q  145 ca-ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |||||| || ||||||||| ||||| ||||||||||||||    
T  38977067 catttctcccctatcataaatgtaaagtggaatatattgaatt 38977025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 41436629 - 41436515
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||||||||||||||| ||||||| | |  |||||| ||||||| |||||| |||| || ||| |||||||| ||||||||||| |||||||||||||||    
T  41436629 acacatattaagaaaagtgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgcaaagt 41436530  T
Q  172 agaatatattgaatt 186  Q
    ||||||| |||||||    
T  41436529 agaatattttgaatt 41436515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 1825198 - 1825321
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta--cattctccactgtcataa 162  Q
    |||||| |||||||||||||||||||||||| |||| |||| ||||||||  |||||| ||| ||| ||||||||| |||  ||||||| ||| ||||||    
T  1825198 tcatttcacacatattaagaaaaatgtataaataaaggagatagaaaaatagttttaagtgcacttgttaagtattagtatgcattctcaactttcataa 1825297  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||| ||||| ||||||||||||||    
T  1825298 atgtaaagtggaatatattgaatt 1825321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 17237209 - 17237077
Alignment:
Q  54 gagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcca 153  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| | || |||||||||||||  |||||| || | || ||||||||| ||  |||||  |    
T  17237209 gagtcatttgctcatttcacacctattaagaaaaatatataaatgaaggagagagaaaaatagttttaagtgattttgttaagtattagtggattcttta 17237110  T
Q  154 ctgtcataaatgcaaagtagaatatattgaatt 186  Q
    || ||||||||||||||| ||||||||||||||    
T  17237109 ctatcataaatgcaaagtggaatatattgaatt 17237077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 39258203 - 39258345
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaag---tattgg 142  Q
    |||||| ||||||||||||| |||| ||||||||||| |||||||||||| | |||||||||| ||||||||||||| ||||||| |||||   |||| |    
T  39258203 gattaattgagtcatttgcttatttcacacatattaaaaaaaatgtataagtgaatgagagag-aaaatgattttaagtgctcttgttaagcactattcg 39258301  T
Q  143 tacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | ||||||  ||| ||||||||| ||| | ||||||||| ||||    
T  39258302 tgcattctttactatcataaatgtaaaatggaatatattaaatt 39258345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 39979959 - 39979814
Alignment:
Q  41 tcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtatt 140  Q
    |||| ||||||||||| ||   ||| |||| |||| ||||||||||||||||||| | ||  ||| ||||||||  |||||| ||| ||| ||||||||     
T  39979959 tcctggattaactgagccaaaagcttatttcacacgtattaagaaaaatgtataaatgaagtagaaagaaaaatagttttaagtgcacttgttaagtatc 39979860  T
Q  141 ggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| ||||||||||| ||||||||| ||||| ||||||||||||||    
T  39979859 ggtgcattctccactatcataaatgtaaagtggaatatattgaatt 39979814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 283410 - 283550
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||| ||||||| | ||||||||| ||  | |||||| | || |||||||||||||  |||||| ||||||| ||||||||| || |    
T  283410 gattaactgagtcattttctcatttcatacatattaataatgacgtataaatgaaggagagagaaaaattgttttaagtgctcttgttaagtatttgtgc 283509  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| | | |||| |||||| |||||||| |||||    
T  283510 attctccactattagaaattcaaagtggaatatatagaatt 283550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 42185757 - 42185869
Alignment:
Q  74 acatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtag 173  Q
    ||||||||||| |||||||||| | || |||| |||||||||||||||| ||||||| ||||||||||||  ||| |||||| |||||||| ||| ||      
T  42185757 acatattaagacaaatgtataaatgaaggagatagaaaaatgattttaagtgctcttgttaagtattggtctattatccactatcataaatacaaggtga 42185856  T
Q  174 aatatattgaatt 186  Q
    |||||||||||||    
T  42185857 aatatattgaatt 42185869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 42544327 - 42544243
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| |||||||||||| ||||||| ||||||||| ||  |||||||||| ||||||||||||||| ||||||||||||||    
T  42544327 gagagagagaaatgattttaagtgctcttgttaagtattagtctattctccactatcataaatgcaaagtggaatatattgaatt 42544243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 26185343 - 26185224
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    |||||||||  | |||||||| |||| |||||||||| | || |||||||||||||| |||||| | ||||| ||||||||||||  |||||||||| ||    
T  26185343 atttgctcaaatcacacatatcaagacaaatgtataaatgaaggagagagaaaaatggttttaaatactcttgttaagtattggtctattctccactatc 26185244  T
Q  159 ataaatgcaaagtagaatat 178  Q
    |||||||||| || ||||||    
T  26185243 ataaatgcaacgtggaatat 26185224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 49812418 - 49812267
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| |||||||  ||||||||||||||    ||||||| |||  ||||||||||||| ||||| | || |||||| ||||||  |||||| ||| |||    
T  49812418 actccctctgtcccggattaactgagtcaaaaactcatttcacatgtattaagaaaaatttataaatgaaggagagaaaaaaatagttttaagtgcactt 49812319  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattg 182  Q
     |||||||||||| |||| |||||| ||||||||| ||||| ||||||||||    
T  49812318 gttaagtattggtgcattatccactatcataaatgtaaagtggaatatattg 49812267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 28974472 - 28974342
Alignment:
Q  54 gagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcca 153  Q
    |||||||||| | |||| ||||||||||||| |||||||||| | || | |||| |||| || |||||| || | || |||||||||||| |||||||||    
T  28974472 gagtcatttgtttatttcacacatattaagacaaatgtataaatgaaagggagataaaagtggttttaagtgttgttgttaagtattggtgcattctcca 28974373  T
Q  154 ctgtcataaatgcaaagtagaatatattgaa 184  Q
     | ||||||||||||||  ||||||||||||    
T  28974372 ttatcataaatgcaaaggggaatatattgaa 28974342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 42670333 - 42670423
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcca 153  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||||||||  | |||| ||| ||| |||||||||||| |||||||||    
T  42670333 gctcatttcacacgtattaagaaaaatgtataaataaatgagagagaaaaatagtcttaagtgcacttcttaagtattggtgcattctcca 42670423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 21241079 - 21240942
Alignment:
Q  35 catctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagaga-aaaatgattttaactgctcttatt 133  Q
    |||| |||||| ||||| ||||||||||| |||||| | |||||||||||||||||||||  | || |||||||| |||||  |||||| ||||||| |     
T  21241079 catccgtcctaaattaagtgagtcatttgttcatttgaaacatattaagaaaaatgtataggtgaaggagagagaaaaaatagttttaagtgctcttgtc 21240980  T
Q  134 aagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||||||  |||| ||| | |||||||||||||||    
T  21240979 aagtattggtcaattcaccattatcataaatgcaaagt 21240942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 54729452 - 54729557
Alignment:
Q  81 aagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatat 180  Q
    ||||||||||||||| | || |||||||||||||  |||||| || | || ||||||||| ||  |||||||||| ||||||||||||||| ||||||||    
T  54729452 aagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattctccactatcataaatgcaaagtggaatatat 54729551  T
Q  181 tgaatt 186  Q
    ||||||    
T  54729552 tgaatt 54729557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 4357740 - 4357602
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||||||||  ||||||| | | |||||||||||||| ||||| | || |||||||||| |||||||||| || | || ||||||||||||  |    
T  4357740 attaactgagtcattgactcatttcatatatattaagaaaaatatataaatgaaggagagagaaagatgattttaagtgtttttgttaagtattggtgga 4357641  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||| |||||||| ||||  | |||||||||||||    
T  4357640 ttcttcactatcataaatacaaa-aaaaatatattgaatt 4357602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 43334971 - 43335096
Alignment:
Q  61 ttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcat 160  Q
    |||||||||| |||||||||||||||||||||||| | ||||  | |||||||| ||||||| || |||| | || |||| || ||||||||| | |  |    
T  43334971 ttgctcatttcacacatattaagaaaaatgtataaatgaatgtaatagaaaaataattttaagtgttcttgtcaaatattagtgcattctccattatttt 43335070  T
Q  161 aaatgcaaagtagaatatattgaatt 186  Q
    ||||| ||||| ||||||||||||||    
T  43335071 aaatggaaagtggaatatattgaatt 43335096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 43421478 - 43421334
Alignment:
Q  35 catctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttatta 134  Q
    |||| |||||| |||| |||||||||||  || ||| ||||||||||||| |||||||||| | ||  |||||||| ||||||||||       || | |    
T  43421478 catcggtcctaaattagctgagtcattttttcttttcacacatattaagataaatgtataaatgaagaagagagaacaatgatttta-------ttgtca 43421386  T
Q  135 agtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | ||||||||||||||||||| ||||||||||||| |  |||||||||||||    
T  43421385 aatattggtacattctccactatcataaatgcaaaatgaaatatattgaatt 43421334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 16493232 - 16493369
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| ||||| |||||  |||||| ||||||||||||| |||||||||| |||| |||||| ||||||| |||||| || | ||  |||||||| || ||    
T  16493232 attagctgagccattttttcatttcacacatattaagataaatgtataaataaaagagagaaaaaaatggttttaagtg-tttttgtaagtatttgtgca 16493330  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||  || |||| |||||||||| ||||||||||||||    
T  16493331 ttctcagctatcat-aatgcaaagtggaatatattgaatt 16493369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 28330967 - 28330828
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||| ||||  ||||||| |||| |||||||||||| ||||||| | || ||||||||||||||  ||| | ||| ||||| || ||||||| ||    
T  28330967 ttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgca 28330868  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |  | |||||||||||||| ||| |||||||||||    
T  28330867 ttcttctttatcataaatgcaaagcagattatattgaatt 28330828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 35909506 - 35909641
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||   | |||||| |||| ||||||||||||||||||| | ||||| ||| |||||| ||||||| ||   || |||||||||||| |    
T  35909506 gattaactgagtcaaaagttcatttcacacgtattaagaaaaatgtataaatgaatgaaagataaaaataattttaagtgtatttgttaagtattggtgc 35909605  T
Q  146 attctccactgtcataaatgcaaagtagaatatatt 181  Q
    ||| |||||| | ||||||| |||||  ||||||||    
T  35909606 attttccactattataaatgtaaagtgaaatatatt 35909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 3686166 - 3686045
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatga--ttttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    ||||||||||||||||| ||||| ||||| | || |||| || ||||  |  |||||| | || || |||||||||||| ||||||||||| | ||||||    
T  3686166 attttacacatattaaggaaaatatataaatgaaggagataggaaaaaaaagttttaagtacttttgttaagtattggtgcattctccactattataaat 3686067  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||    
T  3686066 gcaaagttgaatatattgaatt 3686045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 4727662 - 4727561
Alignment:
Q  78 attaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaata 177  Q
    |||||||||||| ||||||| || ||||||||||||||| ||||| || |||| |||| ||||| | |||| |||| | ||||||||||||| |||||||    
T  4727662 attaagaaaaatatataattgaaggagagagaaaaatga-tttaaatgttcttgttaaatattgatgcattttccattatcataaatgcaaattagaata 4727564  T
Q  178 tat 180  Q
    |||    
T  4727563 tat 4727561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 38320055 - 38319945
Alignment:
Q  77 tattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaa 175  Q
    |||||||||||| ||||||| | || ||||||||||||||  ||| | ||| ||||| || ||||||| |||||| |  | |||||||||||||||||||    
T  38320055 tattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagtagaa 38319956  T
Q  176 tatattgaatt 186  Q
    |||||||||||    
T  38319955 tatattgaatt 38319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 52676978 - 52677104
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| | |  ||||||||||||||||| | | ||||| |||||||||||||||||| |||||||  ||||||||| | ||||   || | |||    
T  52676978 tttgctcatttcatatttattaagaaaaatgtattagtgaatgaaagagaaaaatgattttaagtgctcttgataagtattgatgcatttatcattatca 52677077  T
Q  160 taaatgcaaagtagaatatattgaatt 186  Q
    |||||| |||||| |||||||| ||||    
T  52677078 taaatgtaaagtaaaatatattaaatt 52677104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 18509982 - 18509877
Alignment:
Q  80 taagaaaaatgtataatt-aaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatat 178  Q
    |||||||||||||||||| ||| |||||||||||||  |||||| |  |||| |||||||||||| |||| || |||  ||||||| |||||| ||||||    
T  18509982 taagaaaaatgtataatttaaaagagagagaaaaatatttttaagtattcttgttaagtattggtgcattatctactaacataaatacaaagtggaatat 18509883  T
Q  179 attgaa 184  Q
    ||||||    
T  18509882 attgaa 18509877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 9093751 - 9093835
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||  |||||| ||| ||| ||||||||| || ||||||||||| ||||||||| ||||| ||||||||| ||||    
T  9093751 gagagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactatcataaatgtaaagtggaatatattaaatt 9093835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 34790910 - 34791025
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg-caaag 170  Q
    |||||||||||||||| ||||||| | || | ||||||||||||||||| | |||| |||| ||||||| || |||||| |  | ||||||| |  ||||    
T  34790910 acacatattaagaaaagtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaaagtaaaag 34791009  T
Q  171 tagaatatattgaatt 186  Q
    ||||||||||||||||    
T  34791010 tagaatatattgaatt 34791025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 39052847 - 39052974
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    |||| ||||||| ||||| |||||||||||||||||| | || |||| | ||||| || ||| | ||   |||| |||||||||| |||||| |  | ||    
T  39052847 attttctcatttcacacagattaagaaaaatgtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgcattcttctttatc 39052946  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||||||||    
T  39052947 ataaatgtaaagtagaatatattgaatt 39052974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 40020873 - 40021021
Alignment:
Q  41 tcctagattaactgagtcatttgctcattttacacatattaagaaaaatgta---taattaaatgagagagaaaaatgattttaactgctcttattaagt 137  Q
    ||||| ||||| |||  |||||| |||||| |||||||||||||||||||||   ||| | ||||||||||||||||| |||| | || | || | ||||    
T  40020873 tcctaaattaagtgacccatttggtcatttcacacatattaagaaaaatgtatactaagtgaatgagagagaaaaatggttttgaatgtttttgtcaagt 40020972  T
Q  138 attggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||| ||||  ||| | ||||| |||||||  |||||||||| ||||    
T  40020973 attggtgcatttaccattatcatagatgcaaaaaagaatatattaaatt 40021021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 31862944 - 31862828
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||||||||||| | |||||||| | | || ||  |||||||||| |||||| | ||||| |||||||||| | || ||| |||| ||||| ||    
T  31862944 tcatttcacacatattaaaacaaatgtatcaatgaaggatggagaaaaatggttttaatttctcttgttaagtattgatgcactcttcactatcatagat 31862845  T
Q  165 gcaaagtagaatatatt 181  Q
    ||||||| |||||||||    
T  31862844 gcaaagtggaatatatt 31862828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 37315871 - 37315995
Alignment:
Q  63 gctcattttacacatattaagaaaaatgt-ataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcata 161  Q
    |||||||| |||| |||||||||||| || |||| | || |||||||||||||| ||||   ||| |||||||| |||| || |||| | |  | |||||    
T  37315871 gctcatttaacacttattaagaaaaaagtgataagtgaaagagagagaaaaatggttttggatgcccttattaactattagtgcatttttctttatcata 37315970  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||| |||||||    
T  37315971 aatgcaaagtagaatatgttgaatt 37315995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 26799206 - 26799289
Alignment:
Q  103 agagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||   ||||| || |||| |||||||||| |  ||| |||||| ||||||||||||| ||||||||||||||||    
T  26799206 agagagaaaaatagatttaagtgttctttttaagtattgatgtattttccactatcataaatgcaaaatagaatatattgaatt 26799289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 30568837 - 30568693
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattgg--- 142  Q
    |||||| |||||||||| || |||| | | ||||||||||||||||||||   || || ||||||||||| |||||| || | || ||||||||| |       
T  30568837 gattaagtgagtcatttacttatttcatatatattaagaaaaatgtataaaggaaggaaagagaaaaatggttttaagtgttattgttaagtattagtgc 30568738  T
Q  143 -tacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     | |||||||  || |||||||||||||||  |||||||||||||    
T  30568737 attcattctctgctatcataaatgcaaagtgaaatatattgaatt 30568693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 32559316 - 32559197
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgc 166  Q
    |||| |||||||||||||||||||||||| ||||  || || ||||||  |||||| |||| || |||||||||  |  |||||||||| | |||| |||    
T  32559316 atttcacacatattaagaaaaatgtataaataaagaagggataaaaatatttttaaatgcttttgttaagtattaatgtattctccactataataagtgc 32559217  T
Q  167 aaagtagaatatattgaatt 186  Q
    ||| | ||||||||| ||||    
T  32559216 aaaatggaatatattaaatt 32559197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 42367932 - 42367869
Alignment:
Q  77 tattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtatt 140  Q
    ||||||||||||||||||| | ||||||||||||||||  |||||| ||| ||| |||||||||    
T  42367932 tattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtatt 42367869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 47277628 - 47277755
Alignment:
Q  60 tttgctcattttacacatattaag-aaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    ||||||||||| |||||||||||| |||||||||||| |||| || ||| ||||||  |||| | ||| ||| | | ||||| ||||||| | |  | ||    
T  47277628 tttgctcatttcacacatattaagaaaaaatgtataagtaaaagatagataaaaatatttttcaatgcccttgtcaggtatttgtacatttttctttatc 47277727  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| |||||| |||||||||||||    
T  47277728 ataaatgtaaagtaaaatatattgaatt 47277755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 47787781 - 47787920
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||||||   |||||||| |||| ||||||||||||||||||| | ||  ||||| ||||||  ||||||  || ||| ||||||| || | ||    
T  47787781 attaactgagtcaaaagctcatttcacacgtattaagaaaaatgtataaatgaagaagagataaaaatagttttaagggcacttgttaagtactgatgca 47787880  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | || |||| ||||||||| ||| || ||||||| |||||    
T  47787881 tccttcactatcataaatgtaaaataaaatatatggaatt 47787920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 35998052 - 35998190
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||||||||| || ||||  |||| |||||||||| ||||||| | || | ||  ||||||| ||||| | ||   |||| ||||||||||||||    
T  35998052 ttaattgagtcattttctgatttcgcacagattaagaaaagtgtataaatgaaagcgaacgaaaaataattttgagtgtctttatcaagtattggtacat 35998151  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |  | ||||||||| |||||| |||||||||||||    
T  35998152 tcttctttatcataaatgtaaagtaaaatatattgaatt 35998190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 42132972 - 42132847
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctc--ttattaagtattggtacattctccactgtcat 160  Q
    ||||||| |||| |||||||||||| ||||||| | || ||||||||||||||  ||| | ||| |  |||| || ||||| | |||||| |  | ||||    
T  42132972 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcgcccttataaactattgatgcattcttctttatcat 42132873  T
Q  161 aaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||    
T  42132872 aaatgcaaagtagaatatattgaatt 42132847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 48740604 - 48740554
Alignment:
Q  136 gtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| ||||||||||| ||||||||| ||||| ||||||||||||||    
T  48740604 gtattggtgcattctccactatcataaatgtaaagtggaatatattgaatt 48740554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 53848790 - 53848680
Alignment:
Q  77 tattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaa 175  Q
    |||||||||||| ||||||| |  | |||||| |||||||||||| | ||| ||||| || ||||||| |||| |    | |||||||||||||||||||    
T  53848790 tattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattggtgcattattatttatcataaatgcaaagtagaa 53848691  T
Q  176 tatattgaatt 186  Q
    |||||||||||    
T  53848690 tatattgaatt 53848680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 27655237 - 27655310
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattt 119  Q
    ||||||||||| |||||||| |  | ||||||||||||| |||||||||| | || ||||||||||||| ||||    
T  27655237 gattaactgagccatttgctaaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaataattt 27655310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 2906852 - 2906740
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| ||| ||||||||| || |||  ||||| | |||| ||||||||||| ||| |||||||| | |||||||| |||||||| |||||| || | |     
T  2906852 actccctctatcctagatttaccgagctatttgtttatttcacacatattaaaaaatatgtataaatgaatgagagtgaaaaatggttttaaatgttttc 2906753  T
Q  131 attaagtattggt 143  Q
     ||||||||||||    
T  2906752 gttaagtattggt 2906740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 8065698 - 8065569
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagaga--------aaaatgattttaactgctcttattaagtattggtacattctccac 154  Q
    |||||||| | || ||||||||||||||||||| | || ||||||||        |||||  |||||| ||| ||| |||||||||||| ||||||| ||    
T  8065698 gctcatttcaaacgtattaagaaaaatgtataaatgaaggagagagaggaaaaaaaaaatagttttaagtgcacttgttaagtattggtgcattctctac 8065599  T
Q  155 tgtcataaatgcaaagtagaatatattgaa 184  Q
    | ||||||||| ||||| | ||||||||||    
T  8065598 tatcataaatgtaaagtggtatatattgaa 8065569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 27790366 - 27790493
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgt 157  Q
    |||||| |||||| ||||||||||||||||||||||||   |  ||||  ||||||||||||||| ||||||| | || |||| || ||||| |||   |    
T  27790366 catttgttcatttcacacatattaagaaaaatgtataagcgatggaga-tgaaaaatgattttaagtgctcttgtcaaatattagtgcattcaccatcat 27790464  T
Q  158 cataaatgcaaagtagaatatattgaatt 186  Q
    | |||||||||| | ||||||||| ||||    
T  27790465 cttaaatgcaaaattgaatatattaaatt 27790493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 44020728 - 44020835
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||| ||||||||||||||||||| | || |||||| |||||| ||||||  ||       ||||||||||| |||| |||||| ||||||||| |||||    
T  44020728 acacttattaagaaaaatgtataaatgaaggagagaaaaaaataattttagatg-------taagtattggtgcattatccactatcataaatgtaaagt 44020820  T
Q  172 agaatatattgaatt 186  Q
     ||| ||||||||||    
T  44020821 ggaacatattgaatt 44020835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 50328092 - 50328144
Alignment:
Q  134 aagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||| ||||| |||||||||||||||  |||||||||||||    
T  50328092 aagtattggtgcattcaccactatcataaatgcaaagtgaaatatattgaatt 50328144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 10309195 - 10309328
Alignment:
Q  55 agtcatttgctcattttacacatat--taagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctc 151  Q
    |||| |||| |||||| ||||||||  ||||||||| ||||||| | || || |||||||||| ||||||| || |||| |||| |||||||  |||||     
T  10309195 agtcttttgttcatttcacacatataataagaaaaagtgtataaattaaagaaagagaaaaataattttaagtg-tcttcttaaatattggtgtattctg 10309293  T
Q  152 cactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  | ||||||||||||| || |||||||||||||    
T  10309294 cggtatcataaatgcaaaataaaatatattgaatt 10309328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 12619860 - 12619778
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| ||||| ||||| |||||| | || ||||||||||||||||||| | || ||| |||||||||| |||||| |||||||    
T  12619860 attaagtgagttatttgttcatttcatacttattaagaaaaatgtataagtgaaagagcgagaaaaatg-ttttaagtgctctt 12619778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 25149600 - 25149485
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattc-tccactgtcataaatgcaaag 170  Q
    ||||| |||||||||| |||||||  ||| |||||||||||||  |||| | |||  || |||||||||||| ||||| ||   | ||||||||| ||||    
T  25149600 acacagattaagaaaagtgtataacgaaaagagagagaaaaatagttttgagtgccttttttaagtattggtgcattcctcttttatcataaatgtaaag 25149501  T
Q  171 tagaatatattgaatt 186  Q
    | ||||||||||||||    
T  25149500 tggaatatattgaatt 25149485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 50714755 - 50714616
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| ||||||||||| | |||| | | |||||||||||||| ||||| | || ||| || | ||||  |||||| ||||||| | ||||| | || ||    
T  50714755 attaagtgagtcatttgtttatttcatatatattaagaaaaatttataagtgaaagagggatataaatagttttaagtgctcttgtcaagtagtagtgca 50714656  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| ||| | ||||||||  ||||| ||||||||||||||    
T  50714655 ttcaccattatcataaattgaaagtggaatatattgaatt 50714616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 55360283 - 55360330
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataa 95  Q
    ||||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  55360283 ttaaccgagtcagttgatcattttacacagattaagaaaaatgtataa 55360330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 29644439 - 29644389
Alignment:
Q  136 gtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||| || ||||||| ||| ||||||||| ||||||||||||||||||||    
T  29644439 gtattagtgcattctctactatcataaatgtaaagtagaatatattgaatt 29644389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 36047111 - 36047173
Alignment:
Q  124 tgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| || |||| || |||||| |  | ||||||||||||||||||||||||||||||    
T  36047111 tgctcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatatattgaatt 36047173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 38310316 - 38310367
Alignment:
Q  69 tttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    ||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||    
T  38310316 tttacacatgttaagaaaaatgtataagtgaa--agagagaaaaatgattttaa 38310367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 8759842 - 8759813
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  8759842 tcataaatgcaaagtagaatatattgaatt 8759813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 22020554 - 22020583
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  22020554 tcataaatgcaaagtagaatatattgaatt 22020583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 51527501 - 51527452
Alignment:
Q  137 tattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||| ||||||||| |||||  |||||||||||||    
T  51527501 tattggtgcattctccactatcataaatgtaaagtgaaatatattgaatt 51527452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 42051621 - 42051729
Alignment:
Q  78 attaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaata 177  Q
    |||||||||| ||||||| | || |||| ||||||||| |||| | ||   |||  |||||||||| |||||| |  | ||||||||| |||||||||||    
T  42051621 attaagaaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagtagaata 42051720  T
Q  178 tattgaatt 186  Q
    || ||||||    
T  42051721 taatgaatt 42051729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 5392223 - 5392083
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||||||||||| |||| |||||||| |||||||||| | || |||||||||||||| |||||| |||| || | |||||||||| |    
T  5392223 gattaactgagccatttgctcatttcacacctattaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgc 5392124  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  5392123 attctccactatcataaatgcaaagtggaatatattgaatt 5392083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 139193 - 139056
Alignment:
Q  49 taactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacatt 148  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||| | ||||| |||||||||||| ||||    
T  139193 taaccgagtcatttactcatttcacacatattaagaaaaatgtataaatgaatgagagataaaaatgattttaaattctcttgttaagtattggtgcatt 139094  T
Q  149 ctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||| || ||||||||||||||| ||||||| ||||||    
T  139093 ttccgctatcataaatgcaaagtggaatataatgaatt 139056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 42412312 - 42412456
Alignment:
Q  42 cctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattg 141  Q
    |||| ||||| |||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||  |||||| ||||||| | |  |||||    
T  42412312 cctaaattaagtgagccatttgctcatttcacacatattaagaaaaatgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattg 42412411  T
Q  142 gtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || ||||||||| | ||||||||||||||| ||||||||||||||    
T  42412412 gtgcattctccattatcataaatgcaaagtggaatatattgaatt 42412456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 28802941 - 28802801
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||||||||||| |||  | |||| |||||||| |||||||||| | || |||||||||||||| |||||| ||||||| |||||||||| |      
T  28802941 gattaactgagtcatttgttcaaatcacacgtattaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattgatct 28802842  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  28802841 attctccactatcataaatgcaaagtggaatatattgaatt 28802801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 29615972 - 29615832
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||   |||||||| |||| ||||||||||||||||||| | || ||||||||||||| ||||||| ||| ||| ||||||||||||      
T  29615972 gattaactgagtcaaaagctcatttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaataattttaaatgcacttgttaagtattggtgt 29615873  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | | |||||||||||||||| ||||| ||||||||||||||    
T  29615872 actttccactgtcataaatgtaaagtggaatatattgaatt 29615832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 29730816 - 29730963
Alignment:
Q  35 catctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaa--tgtataattaaatgagagagaaaaatgattttaactgctcttat 132  Q
    |||| |||| ||||||||||||  ||||||||||||||||  ||||||||||||  | ||||| | || ||||||||||| || |||||| || |||| |    
T  29730816 catccgtcccagattaactgagctatttgctcattttacatgtattaagaaaaaaatatataaatgaaggagagagaaaagtggttttaagtgttcttgt 29730915  T
Q  133 taagtattggtacattctccactgtcataaatgcaaagtagaatatat 180  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  29730916 taagtattggtgcattctccactatcataaatgcaaagtagaatatat 29730963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 3384716 - 3384568
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaat--gagagagaaaaatgattttaactgctcttattaagt 137  Q
    |||| ||||||| ||  ||||||| ||||||||||||||||||||||||||||||| | ||   |||||||||||||| | |||| | ||||| ||| ||    
T  3384716 gtcccagattaattgtatcatttgttcattttacacatattaagaaaaatgtataaatgaagaagagagagaaaaatggtattaaatactcttgttatgt 3384617  T
Q  138 attggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| ||||| |||| ||||||||||||||| ||||||||||||||    
T  3384616 attggtatattcttcactatcataaatgcaaagttgaatatattgaatt 3384568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 38252355 - 38252511
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatga-ttttaactgctct 129  Q
    ||||| || |||| |||||||||||| ||   |||||||| |||| ||||||||||||||||||| | || ||||||||||||  | |||||| ||| ||    
T  38252355 actccctccgtcccagattaactgagccaaaagctcatttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaaatagttttaagtgcact 38252454  T
Q  130 tattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | ||||||||| || ||||||||||||||||||||| ||||| ||||||||||||||    
T  38252455 tgttaagtattagtgcattctccactgtcataaatgtaaagtggaatatattgaatt 38252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 42558501 - 42558654
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || |||| |||||||||| ||||||||||||  | ||||||||||||| |||||||||| | || |||||| |||  || |||||| || ||||    
T  42558501 actccctccgtcccagattaactgggtcatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagataaa--tggttttaattgttctt 42558598  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||    
T  42558599 gttaagtattggtttattctccactatcataaatgcaaagtggaatatattgaatt 42558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 21587447 - 21587311
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||||||||||| |||||| | |||||||||||| || |||||| | || |||||||||    | |||||| ||||||| |||||||||||| |    
T  21587447 gattaactgagtcatttgatcatttcatacatattaagaagaacgtataaatgaaggagagagaa----ggttttaagtgctcttgttaagtattggtgc 21587352  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||| | ||||||||||| ||||||||||||||    
T  21587351 attctccactgttagaaatgcaaagtggaatatattgaatt 21587311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 32241364 - 32241497
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcc 152  Q
    ||||||||||  || ||| ||||||||||||| |||||||||| | || |||||| |||||||||||||| || |||| |||||||||| | |||||| |    
T  32241364 tgagtcattttttcttttcacacatattaagacaaatgtataaatgaaggagagataaaaatgattttaagtgttcttgttaagtattgatgcattcttc 32241463  T
Q  153 actgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| ||||||||||||||| ||||||| ||||||    
T  32241464 actatcataaatgcaaagtggaatataatgaatt 32241497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 44790374 - 44790495
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| |||||||| |||||||||| | || |||||||||||||  |||||| ||| ||| |||||||||||| ||||||||||| ||||||||    
T  44790374 tcatttcacacgtattaagacaaatgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaat 44790473  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | ||||| ||||||||||||||    
T  44790474 gtaaagtggaatatattgaatt 44790495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 33190843 - 33190982
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| ||||| |||||  || ||| ||||||||||||| |||||||||| | ||  |||||||||||||||||||| || |||| |||||||||  | ||    
T  33190843 attagctgagccattttttcttttcacacatattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgttcttgttaagtattaatgca 33190942  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||| ||| ||||||||||||||    
T  33190943 ttctccactatcataaatgcatagtggaatatattgaatt 33190982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 32967204 - 32967350
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    ||||||||||||| ||| ||   |||||||| |||| ||||||| ||||||||||| | ||  ||||||||||||  |||||| ||| ||| ||||||||    
T  32967204 gtcctagattaaccgagccaaaagctcatttcacacgtattaagtaaaatgtataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtat 32967303  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||||||||| ||||||||  ||||| ||||||||||||||    
T  32967304 tggtccattctccactatcataaatttaaagtggaatatattgaatt 32967350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 5962427 - 5962546
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgc 166  Q
    |||| |||||||||||| ||||||||||| | || |||| |||||||   |||||| |||| || |||||||||||| ||||||||||| | ||||||||    
T  5962427 atttcacacatattaaggaaaatgtataaatgaaggagatagaaaaaacgttttaagtgcttttgttaagtattggtgcattctccactattataaatgc 5962526  T
Q  167 aaagtagaatatattgaatt 186  Q
    ||||| ||||||||||||||    
T  5962527 aaagtggaatatattgaatt 5962546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 4480402 - 4480519
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||||| | || ||||||||||||| ||||||| | || || ||| ||||||||     
T  4480402 agattaaccgagtcatttgctcatttaacatatattaagaaaaatgtataaatgaaagagagagaaaaat-attttaaatacttttgttatgtattggtg 4480500  T
Q  145 cattctccactgtcataaa 163  Q
    ||||||||| | |||||||    
T  4480501 cattctccagtatcataaa 4480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 22324888 - 22325028
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||| ||||||   |||||||| |||  ||||||||||||||||||| | || ||||||||||||| ||||||| ||  ||| |||| |||| || |    
T  22324888 gattaaccgagtcaaaagctcatttcacaagtattaagaaaaatgtataaatgaaggagagagaaaaataattttaagtgtacttgttaaatattagtgc 22324987  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||| ||||||||| ||||| ||||||||||||||    
T  22324988 attttccactatcataaatgtaaagtggaatatattgaatt 22325028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 12653862 - 12653721
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||||| ||   |||||||| |||| ||||||||||||||||||| | ||  ||||||||||||  |||||| |||  || |||| |||||||     
T  12653862 agattaactgagccaaaagctcatttcacacgtattaagaaaaatgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtg 12653763  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||||| | ||||||| ||||| ||||||||||||||    
T  12653762 cattatccactattataaatgtaaagtggaatatattgaatt 12653721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 15559094 - 15559203
Alignment:
Q  77 tattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaat 176  Q
    ||||||||||||||||| | | || |||||| |||||||||||||| || |||| | ||||||||||  |||  ||| | ||||||||||||||||||||    
T  15559094 tattaagaaaaatgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgcaaagtagaat 15559193  T
Q  177 atattgaatt 186  Q
    ||||||||||    
T  15559194 atattgaatt 15559203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 45197785 - 45197645
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    ||||||| ||| |||||||| ||||| |||||  ||||| ||||| ||||| | ||||||||| |||||||||||||| || | || |||||||||| |     
T  45197785 agattaagtgaatcatttgcacatttcacacaccttaagcaaaatatataaatgaatgagaga-aaaaatgattttaagtgtttttgttaagtattgatg 45197687  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||| |||||||||||||| ||| |  |||||||||||||    
T  45197686 cattcttcactgtcataaatgtaaaatgaaatatattgaatt 45197645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 7042927 - 7042792
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtat-aattaaatgagagagaaaaatgattttaactgctctt-attaagtattggta 144  Q
    ||||| ||||||||||  |||||| |||||||| ||||||||||||| ||| |||  | |||||||||||| ||||| |||||||  ||||||||||||     
T  7042927 attaaatgagtcatttattcatttcacacatatcaagaaaaatgtataaatgaaaaaaaagagaaaaatgaatttaagtgctcttgtttaagtattggtg 7042828  T
Q  145 cattctccactgtcataaatgcaaagtagaatatat 180  Q
    ||||||| | | ||||||||| ||||| ||||||||    
T  7042827 cattctctattatcataaatgtaaagtggaatatat 7042792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 9014820 - 9014745
Alignment:
Q  103 agagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatat 178  Q
    |||||||||||||||||||| |||| || |||||||||| | ||||||||||| ||||||||||||||| ||||||    
T  9014820 agagagaaaaatgattttaagtgcttttgttaagtattgatgcattctccactatcataaatgcaaagtggaatat 9014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 33746137 - 33746292
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || ||||| ||||||||||||||   |||||||| |||| |||||| |||||||||||| | || || | |||||||| ||||||| ||| |||    
T  33746137 actccctccgtcctggattaactgagtcaaaggctcatttcacacgtattaaaaaaaatgtataaatgaaagaaaaagaaaaataattttaagtgcactt 33746236  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| || || |||||||| | ||||||  |||   ||||||||||||||    
T  33746237 attaagtattagtgcaatctccactatgataaatataaaaaggaatatattgaatt 33746292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 27868272 - 27868398
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| |||| ||||||||||||||||| | | |||||  |||||||||| |||||  || |||| | |||||||| | ||||   || | |||    
T  27868272 tttgctcatttcacacttattaagaaaaatgtattagtgaatgatggagaaaaatggttttacgtgttcttgtcaagtattgatccatttatcattatca 27868371  T
Q  160 taaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||||||    
T  27868372 taaatgcaaagtagaatatattgaatt 27868398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 27973633 - 27973759
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| |||| ||||||||||||||||| | | || ||  |||||||||| |||||| || |||| | |||||||| | ||||  ||| | |||    
T  27973633 tttgctcatttcacacttattaagaaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattgatccatttaccattatca 27973732  T
Q  160 taaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||| ||||||||    
T  27973733 taaatgcaaagtagaatacattgaatt 27973759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 28030902 - 28031028
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| |||| ||||||||||||||||| | | || ||  |||||||||| |||||| || |||| | |||||||| | ||||  ||| | |||    
T  28030902 tttgctcatttcacacttattaagaaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattgatccatttaccattatca 28031001  T
Q  160 taaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||| ||||||||    
T  28031002 taaatgcaaagtagaatacattgaatt 28031028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 31132845 - 31132771
Alignment:
Q  105 agagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatata 179  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||||| | ||||||||||||| | |||||||    
T  31132845 agagaaaaatgattttaagtgctcttgttaagtattggtatattctccagtatcataaatgcaaaatggaatata 31132771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 39998335 - 39998197
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||| ||||| ||||||| | ||||||||||||||  |||||| | || ||||||||||||||||||||| ||   |||| ||||||| |  |||    
T  39998335 ttaattgagccattttctcatttcatacatattaagaaaagagtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtatttgagcat 39998236  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |  | ||||||||| ||||||||||||||||||||    
T  39998235 tcttctttatcataaatgtaaagtagaatatattgaatt 39998197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 45425617 - 45425519
Alignment:
Q  88 atgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | || |||||||| ||||| |||||| ||||||| |||||||||| | |||| |||||| ||||||||||||||| ||||||||| ||||    
T  45425617 atgtataaatgaaggagagagacaaatggttttaagtgctcttgttaagtattgatgcattttccactatcataaatgcaaagtggaatatattaaatt 45425519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 31410560 - 31410681
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||||||||||||||||||  |||| | || ||||||||||||   |||||| || | || |||| ||||||| |||| | |||| ||||||||    
T  31410560 tcatttcacacatattaagaaaaattaataaatgaaggagagagaaaaacagttttaagtgtttttgttaaatattggtgcattatacactatcataaat 31410659  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||    
T  31410660 gcaaagtggaatatattgaatt 31410681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 39171697 - 39171577
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| |||||| |||||| ||||| | || |||||||||||||| |||||| | || || |||||||||| | |||| || ||| ||||||||    
T  39171697 tcatttcacacctattaa-aaaaatatataaatgaaggagagagaaaaatggttttaagtacttttgttaagtattgatgcattatctactatcataaat 39171599  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||    
T  39171598 gcaaagtggaatatattgaatt 39171577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 34133299 - 34133161
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||   |||||||| |  |||||||| |||||| ||||| |||| ||||||||||||| ||||||| ||| ||| |||||||||||  |    
T  34133299 gattaactgagccaaaagctcatttcatgcatattaa-aaaaat-tataaataaaggagagagaaaaataattttaagtgcacttgttaagtattggcgc 34133202  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||| ||| |  |||||||||||||    
T  34133201 attctccactatcataaatgtaaaatgaaatatattgaatt 34133161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 2195616 - 2195502
Alignment:
Q  72 acacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaag 170  Q
    ||||||||||||||||| ||||||| | || |||||||||||||  |||| | || |||| |||||||||||| ||||||    | ||||||||||||||    
T  2195616 acacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tcttgttaagtattggtgcattctttcttatcataaatgcaaag 2195518  T
Q  171 tagaatatattgaatt 186  Q
    ||||||||||||||||    
T  2195517 tagaatatattgaatt 2195502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 12957912 - 12958051
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    |||||||| |||| ||||| |||||| ||||||||||| ||||| ||||||| |    || | ||||||||| |||||| |||||||||||  |||| ||    
T  12957912 agattaaccgagttatttgttcatttcacacatattaaaaaaaaatgtataaatgttggaaatagaaaaatggttttaagtgctcttattatctattagt 12958011  T
Q  144 acattctccactgtcataaatgcaaagtagaatatattga 183  Q
     ||||||| ||| |||||||| |||||| |||||||||||    
T  12958012 gcattctcaactatcataaatacaaagtggaatatattga 12958051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 14690117 - 14689994
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    ||||||| |||| |||||||||||| ||||||| | || |||||||||||||| |||| | ||  ||||| || ||||||| ||||||    | ||||||    
T  14690117 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtccttatcaactattggtgcattcttttttatcataa 14690018  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||    
T  14690017 atgcaaagtagaatatattgaatt 14689994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 1494182 - 1494316
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaag-aaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||| ||||||  |||||||| |||| ||||||| |||||||||||  | || ||| ||||||||||||||| | ||| ||||| || ||||| | ||    
T  1494182 ttaacttagtcatcggctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgca 1494281  T
Q  147 ttctccactgtcataaatgcaaagtagaatatatt 181  Q
    |||| |  | |||||||||||||||||||||||||    
T  1494282 ttcttctttatcataaatgcaaagtagaatatatt 1494316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 2349534 - 2349384
Alignment:
Q  37 tctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatga-ttttaactgctcttattaa 135  Q
    |||||||  ||||||||||||||    ||||||| |||  |||||| |||||||||||| | || ||||||||||||  | |||||| |||  || ||||    
T  2349534 tctgtcccggattaactgagtcaaaaactcatttcacatgtattaaaaaaaatgtataaatgaaggagagagaaaaaatagttttaagtgcatttgttaa 2349435  T
Q  136 gtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||| || ||||||||||| ||||||||| ||| | ||||||||||||||    
T  2349434 gtatttgtgcattctccactatcataaatgtaaattggaatatattgaatt 2349384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 7258302 - 7258440
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    ||||||||||  |||||| |||| |||| |||||| |||||| ||| | | || || ||||||||||| ||||||  |||||| | |||||||||| |||    
T  7258302 ttaactgagttctttgcttatttcacacttattaaaaaaaatatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcat 7258401  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |   || | ||||||||||||| ||||||||||||||||    
T  7258402 ttatcattatcataaatgcaaactagaatatattgaatt 7258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 25174556 - 25174658
Alignment:
Q  84 aaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattga 183  Q
    |||||||||||| |||| |||||| || ||||||||| | ||| |||||||| ||||||| |||| | |  | | |||||||||||||||||||||||||    
T  25174556 aaaaatgtataagtaaaagagagaaaagaatgattttgagtgcccttattaactattggtgcattattctttattataaatgcaaagtagaatatattga 25174655  T
Q  184 att 186  Q
    |||    
T  25174656 att 25174658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 37219681 - 37219770
Alignment:
Q  33 tccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    |||||| |||| | |||| |||||||||||  |||||| ||||||||||||| |||||||||| | || |||||||||| ||||||||||    
T  37219681 tccatccgtcccaaattagctgagtcattttttcatttcacacatattaagacaaatgtataaatgaaggagagagaaatatgattttaa 37219770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 40077712 - 40077823
Alignment:
Q  75 catattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtaga 174  Q
    ||||||||||||| ||||||| | || |||||| |||||||||||| | ||   || | |||||||||| |||||| |  | ||||||||| ||||||||    
T  40077712 catattaagaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagtaga 40077811  T
Q  175 atatattgaatt 186  Q
    ||||||||||||    
T  40077812 atatattgaatt 40077823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 6438053 - 6437951
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| ||||| ||||| |||||||||  ||||||| |||||||||||| | ||||||| ||||||||  |||||| ||||||| | || |||||||| |    
T  6438053 attaagtgagttatttgttcattttacgtatattaaaaaaaatgtataagtgaatgagacagaaaaattgttttaaatgctcttgtaaaatattggtata 6437954  T
Q  147 ttc 149  Q
    |||    
T  6437953 ttc 6437951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 8394203 - 8394328
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgaga--gagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcat 160  Q
    ||||||| |||| |||||||||||| ||||||| || | ||||  ||||||||||| ||||| ||||||||| || ||||||| |||| | |  | ||||    
T  8394203 ctcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaactattggtgcattattctttatcat 8394302  T
Q  161 aaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||||| |||||||||||||    
T  8394303 aaatacaaagtaaaatatattgaatt 8394328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 14748654 - 14748779
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaat--gattttaactgctcttattaagtattggtacattctccactgtcat 160  Q
    |||||||||||| |||||||||||| ||||||| | || |||||||| ||||  |  ||| | ||||||||| || |||| || |||||| |  | ||||    
T  14748654 ctcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaatatgggtttgagtgctcttatcaactattagtgcattcttctttatcat 14748753  T
Q  161 aaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||    
T  14748754 aaatgcaaagtagaatatattgaatt 14748779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 26677227 - 26677113
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaa-tgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    |||| |||||||||||||||||||||||| | || |||||||||||| |  |||||| ||   || | || ||||||| ||||| ||| | |||||||||    
T  26677227 atttcacacatattaagaaaaatgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccattatcataaatg 26677128  T
Q  166 caaagtagaatatat 180  Q
    |||||||||||||||    
T  26677127 caaagtagaatatat 26677113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 36649644 - 36649789
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||||| ||||| | ||||||||| ||||||||||| |||||||||||||||| || | || ||||||| ||| |  |||||| || |||||| || |||    
T  36649644 gtcctaaattaagtaagtcatttgttcattttacacttattaagaaaaatgtaaaagtgaaagagagag-aaattagttttaagtgttcttatcaaatat 36649742  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||  |||| |||| | |||||||| ||||  |||||||||| ||||    
T  36649743 tggaccattttccattatcataaatacaaaacagaatatattaaatt 36649789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 44615384 - 44615438
Alignment:
Q  132 ttaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||  |||||||||| | ||||||||||||||||||||||||||||    
T  44615384 ttaagtattggtgaattctccactattataaatgcaaagtagaatatattgaatt 44615438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 138633 - 138772
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||||  |||| ||||||| ||| | ||||||||||| ||||||| | || || |||||||||||||||||| || | || ||| ||||||||     
T  138633 gattaactgagctatttactcatttcacatacattaagaaaaaatgtataaatgaa-ga-agagaaaaatgattttaagtgtttttgttatgtattggtg 138730  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||| ||  || ||||||||||||||| ||||||||||||||    
T  138731 gattttcttctatcataaatgcaaagtggaatatattgaatt 138772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 2119857 - 2119750
Alignment:
Q  76 atattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaa 175  Q
    ||||||||| ||||||||||| |||   ||||||||||| ||||||| || || | |||  |||||||||||||| || | ||||||||| ||||| |||    
T  2119857 atattaagataaatgtataataaaa---gagagaaaaataattttaagtgttcctgttatatattggtacattcttcattatcataaatgtaaagtggaa 2119761  T
Q  176 tatattgaatt 186  Q
    |||| ||||||    
T  2119760 tatactgaatt 2119750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 40316523 - 40316619
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    ||||| ||||||||||||| |||| || |||| ||||||||||||| || | ||||||||| ||||||| ||||||   ||||| |||| |||||||    
T  40316523 attaaatgagtcatttgcttatttcactcatactaagaaaaatgtacaaatgaatgagagaaaaaaatggttttaagatctcttgttaaatattggt 40316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 4274265 - 4274372
Alignment:
Q  79 ttaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatat 178  Q
    |||||| |||||||||| | ||  |||||||||||| ||||||| |||| |  |||| ||| |||  ||||||| || |||||||||||||||  |||||    
T  4274265 ttaagacaaatgtataaatgaagaagagagaaaaataattttaagtgctttcgttaaatatcggtctattctcccctatcataaatgcaaagtgaaatat 4274364  T
Q  179 attgaatt 186  Q
    ||||||||    
T  4274365 attgaatt 4274372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 37703148 - 37703085
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    ||||| |||||| ||||||||||||||||||||||||   ||  ||||||||||||||||||||    
T  37703148 atttgatcatttcacacatattaagaaaaatgtataagcgaaaaagagagaaaaatgattttaa 37703085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 1230383 - 1230435
Alignment:
Q  133 taagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  1230383 taagtattggtgcatt-tccattatcataaatgcaaagtagaatatattgaatt 1230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 3442655 - 3442607
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataa 95  Q
    ||||| ||| |||||||||||||| |||||| |||||||||||||||||    
T  3442655 attaagtgaatcatttgctcatttcacacatgttaagaaaaatgtataa 3442607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 13084919 - 13085015
Alignment:
Q  84 aaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatat 180  Q
    |||||||| ||| | || |||||| ||||||  |||||| || |||| |||| ||||||| ||||||| ||  ||||||||||||||| ||||||||    
T  13084919 aaaaatgtgtaaatgaaggagagacaaaaatagttttaagtgttcttgttaattattggtgcattctctacaatcataaatgcaaagtggaatatat 13085015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 28791462 - 28791342
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| ||||| |||||||||| |||||||   || |||||||||||||  |||| | |||  || | |||||||||| |||||| |  | |||||||||    
T  28791462 catttcacacagattaagaaaagtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatg 28791363  T
Q  166 caaagtagaatatattgaatt 186  Q
     ||| ||||||||||||||||    
T  28791362 taaactagaatatattgaatt 28791342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 29638455 - 29638335
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| ||||| |||||||||| ||||||| | || || ||||||||||| |||| | |||  || | |||||||||| |||| | |  | |||||||||    
T  29638455 catttcacacagattaagaaaagtgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaatg 29638356  T
Q  166 caaagtagaatatattgaatt 186  Q
     |||||| |||||||||||||    
T  29638355 taaagtataatatattgaatt 29638335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 33508830 - 33508929
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||||| |||||  ||| |||||| ||| |||| |  ||||||||||||||||||| ||| ||||||| |||||| ||||||| || |||| | ||||||    
T  33508830 gtcctaaattaagcgagacatttgttcactttatatttattaagaaaaatgtataaataactgagagaaaaaaataattttaagtgttcttgtcaagtat 33508929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 5423123 - 5423237
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||||||||| ||||| |||| | || ||||||||||||||||||| | ||  ||| | ||| ||||||  |||  ||| | |||||||| ||||||    
T  5423123 acacatattaagataaatgcataagtgaaagagagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccattatcataaatacaaagt 5423222  T
Q  172 agaatatattgaatt 186  Q
     ||| ||||||||||    
T  5423223 ggaagatattgaatt 5423237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 32472180 - 32472130
Alignment:
Q  134 aagtattggtacattctccactgtcataaatgcaaagtagaatatattgaa 184  Q
    ||||||| ||| |||||||| | ||||||||| ||||||||||||||||||    
T  32472180 aagtattagtatattctccattatcataaatgaaaagtagaatatattgaa 32472130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 33743932 - 33743810
Alignment:
Q  65 tcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    |||||| |||| |||||||||||| ||||||| | || ||||||||||||||  ||| | ||  ||||| || |||| || |||||| |  | |||||||    
T  33743932 tcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaatgggtttgagtgtacttatcaactatttgtgcattcttctttatcataaa 33743833  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    | |||||||||||||||| ||||    
T  33743832 tacaaagtagaatatattaaatt 33743810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 39416477 - 39416352
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt-attaagtattggtacattctc 151  Q
    ||||||||||| |||||| |||| ||||||||||||| |||||  |||  ||||| ||| |||||||||| || | || || ||||||| || |||||||    
T  39416477 tgagtcatttgttcatttcacacgtattaagaaaaatatataaagaaa-aagagataaagatgattttaagtgtttttgataaagtatttgtgcattctc 39416379  T
Q  152 cactgtcataaatgcaaagtagaatat 178  Q
     | | ||||||||||||| | ||||||    
T  39416378 taatatcataaatgcaaattggaatat 39416352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 2797103 - 2797074
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  2797103 tcataaatgcaaagtagaatatattgaatt 2797074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 2875130 - 2875159
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  2875130 tcataaatgcaaagtagaatatattgaatt 2875159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 17006008 - 17005979
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  17006008 tcataaatgcaaagtagaatatattgaatt 17005979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 17571240 - 17571269
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  17571240 tcataaatgcaaagtagaatatattgaatt 17571269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 37459513 - 37459444
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgat 117  Q
    |||||| ||||||| |||||||| |||| ||||||||||| ||||||| | ||  ||||| |||||||||    
T  37459513 ttaactaagtcattggctcatttcacacttattaagaaaagtgtataaatgaaaaagagaaaaaaatgat 37459444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 37490551 - 37490691
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||| ||||||||||  |||||| |||||| ||||||||||||||||| | || ||||||||||||||||||||| || | || |||||||||||| |    
T  37490551 gattaagtgagtcatttattcatttcacacatgttaagaaaaatgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgc 37490650  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  37490651 attctccactatcataaatgcaaagtggaatatattgaatt 37490691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 11616735 - 11616603
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||| | || |||||||||||||| |||||| ||||||| |||||||||||| |    
T  11616735 gattaactgagccatttgctcatttcacacatattaa-aaaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtgc 11616637  T
Q  146 attctccactgtcataaatgcaaagtagaatata 179  Q
    |||||||||| ||||| ||||||||| |||||||    
T  11616636 attctccactatcatatatgcaaagtggaatata 11616603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 2846609 - 2846749
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||||||||  |   ||||||||||| |||||||||| | || |||||||||||||  |||||| ||||||| ||||||||||||      
T  2846609 gattaactgagtcatttgctcaaatcgtacatattaagacaaatgtataaatgaacgagagagaaaaatagttttaagtgctcttgttaagtattggtct 2846708  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| |||||||| |||||| ||||||||||||||    
T  2846709 attctccactatcataaattcaaagtggaatatattgaatt 2846749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 7425811 - 7425951
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttatt-aagtattggtac 145  Q
    |||| ||||| |||||  |||||| |||| |||||||| |||||||||| | ||||||||||||||||| |||||| || |||| || |||||||||| |    
T  7425811 attagctgagccattttttcatttcacacgtattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgttcttgtttaagtattggtgc 7425910  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  7425911 attctccactatcataaatgcaaagtggaatatattgaatt 7425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 44604411 - 44604547
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||  ||||||||||  | ||||||||||||| |||||||||| | || ||||||||||||||||||||| || |||| ||||||||||||      
T  44604411 gattaactgaaccatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttcttgttaagtattggttt 44604510  T
Q  146 attctccactgtcataaatgcaaagtagaatatattga 183  Q
    |||||||||| ||||||| ||||||| |||||||||||    
T  44604511 attctccactatcataaa-gcaaagtggaatatattga 44604547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 27234675 - 27234554
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||| |||||||| || |||||| || | || |||||||||| | ||    
T  27234675 attaactgagtcatttgttcatttcacacatattaagaaaaatgtataaatgaatgacagagaaaattg-ttttaagtgtttttgttaagtattgatgca 27234577  T
Q  147 ttctccactgtcataaatgcaaa 169  Q
    ||||||||| |||||||||||||    
T  27234576 ttctccactatcataaatgcaaa 27234554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 29257721 - 29257581
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||| ||| ||||||||||  | ||||||||||||| |||||||||| | ||  ||||| ||||||| |||||| ||||||| |||| |||||||      
T  29257721 gattaaccgagccatttgctcaaatcacacatattaagacaaatgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggtct 29257622  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||| ||||||||||||||| ||||||||||||||    
T  29257621 attttccactatcataaatgcaaagtggaatatattgaatt 29257581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 29434511 - 29434653
Alignment:
Q  43 ctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattgg 142  Q
    |||||||||||||| ||   |||||||| |||||||||||||||| | | ||| | || |||||||||||||  |||||| |||| || |||||||||||    
T  29434511 ctagattaactgagccaaaagctcatttcacacatattaagaaaattttttaaatgaa-gagagagaaaaatagttttaagtgcttttgttaagtattgg 29434609  T
Q  143 tacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  |||||||||| ||||||||||||||| ||||||||||||||    
T  29434610 tggattctccactttcataaatgcaaagtggaatatattgaatt 29434653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 30463173 - 30463050
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| || | ||||||||||||||||||| | ||||||||||||||||  |||||| ||| ||| |||||||||||| ||||||||||  ||||||    
T  30463173 gctcatttcacgcgtattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccacaatcataa 30463074  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||| ||| | ||||||||||||||    
T  30463073 atgtaaaatggaatatattgaatt 30463050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 46095354 - 46095493
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||| |||| |||||||| |||| | |||||||||||||||||||||| |||| |||| | ||||||| |||| | ||||||| |||| |||| || |    
T  46095354 gattaagtgagacatttgctaatttcatacatattaagaaaaatgtataaataaaggagaaa-aaaaatggttttgagtgctcttgttaaatatttgtgc 46095452  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||| ||| |||||||||||||||  |||||||||||||    
T  46095453 attctctactatcataaatgcaaagtgaaatatattgaatt 46095493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 32776144 - 32776017
Alignment:
Q  60 tttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    ||||||||||| ||||||||||||||||| ||||||| | || |||||||||||||| |||| | |||  || |||||||||||| |||||| |  | ||    
T  32776144 tttgctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttatc 32776045  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||||||||    
T  32776044 ataaatgtaaagtagaatatattgaatt 32776017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 32971952 - 32972091
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| |||||||||  ||||||| |||| |||||||||||| ||||||| | || |||||||||||||| |||| | ||| ||||| || ||||||| ||    
T  32971952 ttaattgagtcattgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgca 32972051  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||    ||||||||||||||||||||||||||||||||    
T  32972052 ttcttttttgtcataaatgcaaagtagaatatattgaatt 32972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 49100453 - 49100575
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||| ||||||||||||||||||| | || || |||||||||| | ||||| ||| ||| ||||||||||||  |||||||||| ||||||    
T  49100453 gctcatttcacacgtattaagaaaaatgtataaatgaaagacagagaaaaat-agtttaagtgcacttgttaagtattggtttattctccactatcataa 49100551  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||| ||||| ||||||||||||||    
T  49100552 atgtaaagtggaatatattgaatt 49100575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 5724660 - 5724780
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| ||||||||||||||||||| | || |||||||||||||  |||||| ||| ||| ||||||||| || ||||||||||| ||||||||    
T  5724660 tcatttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgc-cttgttaagtattagtgcattctccactatcataaat 5724758  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | |||||  |||||||||||||    
T  5724759 gtaaagtgaaatatattgaatt 5724780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 33584735 - 33584597
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||| ||||  | ||||||||||||| |  ||||||| | || |||||||||||||| |||||| |||| || ||||||||||||      
T  33584735 gattaactgagccatttactcaaatcacacatattaagaca--tgtataaatgaaggagagagaaaaatggttttaagtgctattgttaagtattggtgt 33584638  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | ||||||||||||| | ||||||||||||||    
T  33584637 attctccagtatcataaatgcaaaatggaatatattgaatt 33584597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 36117819 - 36117695
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccact-gtcata 161  Q
    |||||||||| |  ||||||||||||||||||| |||| || ||||||||||  |||||| ||| ||| ||||||||| || |||||||||||  |||||    
T  36117819 gctcattttatatgtattaagaaaaatgtataaataaaggaaagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactattcata 36117720  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    |||| ||||| ||||||||||||||    
T  36117719 aatgtaaagtggaatatattgaatt 36117695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 47454161 - 47454041
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||| ||||||||||||| ||||| | || ||||||| |||||  |||||| ||| ||| |||||||||||| ||||||||||| ||||||    
T  47454161 gctcatttcacacgtattaagaaaaatatataaatgaaggagagagtaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataa 47454062  T
Q  163 atgcaaagtagaatatattga 183  Q
    ||| |||||  ||||||||||    
T  47454061 atgtaaagtgaaatatattga 47454041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 38181833 - 38181947
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||||| ||||||  ||| ||||| | || |||||||||||||| |||||| || ||||  ||||||||||| |||| |||||| ||||||||||||| |    
T  38181833 acacatgttaagactaatatataaatgaaagagagagaaaaatggttttaagtgttcttggtaagtattggtgcattttccactatcataaatgcaaaat 38181932  T
Q  172 agaatatattgaatt 186  Q
    |||||||||||||||    
T  38181933 agaatatattgaatt 38181947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 45890792 - 45890888
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    ||||||||||| ||||| |||||| |||| |||||||||||||||||||   || |||||||||||||| |||||| |||| || ||||||||||||    
T  45890792 attaactgagttatttgttcatttcacacgtattaagaaaaatgtataaaagaaggagagagaaaaatggttttaaatgcttttgttaagtattggt 45890888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 2842018 - 2842125
Alignment:
Q  79 ttaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatat 178  Q
    ||||||||||||||||| | || |||||||||||||| | |||| || | || | |||||||| | ||||||||||| |||||||||||||||  |||||    
T  2842018 ttaagaaaaatgtataaatgaaggagagagaaaaatggtgttaagtgttattgtcaagtattgatgcattctccactatcataaatgcaaagtgaaatat 2842117  T
Q  179 attgaatt 186  Q
    ||||||||    
T  2842118 attgaatt 2842125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 17266199 - 17266061
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||| |||||||||| || ||| | |||||||||||||||||| |||   ||  ||||||||||||| ||| || || | ||||||||||||||| ||    
T  17266199 attaaccgagtcatttgttc-tttcaaacatattaagaaaaatgtgtaagcgaagaagagagaaaaatggtttaaagtgtttttattaagtattggtgca 17266101  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||| |||||||||||||||  ||||||| |||||    
T  17266100 ttcttcactatcataaatgcaaagtgaaatatatcgaatt 17266061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 23058972 - 23058858
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| |||| ||||||||||||| ||||| | || |||||||||||||  |||||| || |||| ||| |||||||| ||||||||||| |||||||||    
T  23058972 catttcacacgtattaagaaaaatatataaatgaaagagagagaaaaatagttttaagtgttcttgtta-gtattggtgcattctccactatcataaatg 23058874  T
Q  166 caaagtagaatatatt 181  Q
    ||||||  ||||||||    
T  23058873 caaagtgaaatatatt 23058858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 23186083 - 23186216
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||||||||||| | | |||||||||||||| ||||| | || ||||||||||||   |||       | || |||  ||||||| |    
T  23186083 gattaactgagtcatttgctcatttcatatatattaagaaaaatatataaatgaaggagagagaaaaactgttt-------tgttgttagttattggtgc 23186175  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  23186176 attctccactatcataaatacaaagtagaatatattgaatt 23186216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 18235331 - 18235230
Alignment:
Q  79 ttaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatat 178  Q
    ||||||| ||| ||||| | || |||||| |||||| ||||||| ||| ||| |||||||||||| ||||||||||| ||||||||| ||||| ||||||    
T  18235331 ttaagaagaatatataaatgaaggagagaaaaaaataattttaaatgcacttgttaagtattggtgcattctccactatcataaatgtaaagtggaatat 18235232  T
Q  179 at 180  Q
    ||    
T  18235231 at 18235230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 21387476 - 21387553
Alignment:
Q  109 aaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||| ||||||| ||| ||| |||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||    
T  21387476 aaaaataattttaaatgcacttgttaagtattggtgcattctccactatcataaatgtaaagtggaatatattgaatt 21387553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 31549557 - 31549692
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    ||||||||||| |||||||||||||||| ||||||||||||  ||| | | || |||| ||||||| | ||||||   ||||| | ||||||| || |||    
T  31549557 ttaactgagtcttttgctcattttacacttattaagaaaaaaatattagtgaaggagaaagaaaaacggttttaaacactcttgtcaagtattagtgcat 31549656  T
Q  148 tctccactgtcataaatgcaaagtagaatatattga 183  Q
    |  ||| | |||| ||||||||||||||||||||||    
T  31549657 ttaccattatcattaatgcaaagtagaatatattga 31549692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 26296139 - 26296205
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaat 114  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||| | ||| ||||||||||||    
T  26296139 ttaagtgagtcatttactcatttgacacatattaagaaaaatgtataaatgaattagagagaaaaat 26296205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 34001793 - 34001932
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||| |||||||||| | |||| | |||||||||| ||||| || || ||||||| |||| |||||| |||||| ||||||| |||||||||| |     
T  34001793 agattaaccgagtcatttgtttatttcagacatattaag-aaaatatacaaataaatgaaagag-aaaatggttttaagtgctcttgttaagtattgatg 34001890  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
       | |||| | ||||||||||||||| ||||||||||||||    
T  34001891 tggtatccattatcataaatgcaaagtggaatatattgaatt 34001932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 47238390 - 47238265
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| |||||||| |||||||| |||| |||||||||||| ||||||| | || |||||||||||||| |||| | ||| ||||| ||  |||||| ||    
T  47238390 ttaaccgagtcattggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaacaattggtgca 47238291  T
Q  147 ttctccactgtcataaatgcaaagta 172  Q
    |||| |  | ||||||||||||||||    
T  47238290 ttcttctttatcataaatgcaaagta 47238265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 1643327 - 1643411
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||| |||| || |||| ||||||||||||||| |||||| ||   ||||||||||||||| ||||||||| ||||    
T  1643327 gagagagaaaaataatttaaagtgcttttattaagtattggtgcattcttcataatcataaatgcaaagtggaatatattaaatt 1643411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 2849409 - 2849289
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| |||||||||||||||||||||||| | || |||||||||||||  ||||   ||   || | |||||||||| |||||| |  | |||||||||    
T  2849409 catttcacacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaatg 2849310  T
Q  166 caaagtagaatatattgaatt 186  Q
     ||||||||||||||||||||    
T  2849309 taaagtagaatatattgaatt 2849289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 33773995 - 33774116
Alignment:
Q  65 tcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    |||||| ||| ||||||||||||| ||||||| | || |||||||||||||  |||| | || |||| |||||||||| |  |||||||||| ||||| |    
T  33773995 tcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tcttgttaagtattgatgtattctccactatcataga 33774093  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    |||||||| ||||||| ||||||    
T  33774094 tgcaaagtggaatatactgaatt 33774116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 42122328 - 42122250
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    ||||||||||||||||||| ||||||||||| | ||  ||||| ||| |||||||||| ||||||| |||| |||||||    
T  42122328 tcattttacacatattaaggaaaatgtataagtgaaatagagaaaaagatgattttaagtgctcttgttaaatattggt 42122250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 29996979 - 29997099
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    ||||||| |||| |||||||||||| ||||||| | || |||| ||||||||| |||| | ||  ||| |||| ||||||| |||||| |  | ||||||    
T  29996979 ctcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtccttgttaattattggtgcattcttctttatcataa 29997078  T
Q  163 atgcaaagtagaatatattga 183  Q
    |||||||||| ||||||||||    
T  29997079 atgcaaagtataatatattga 29997099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 37264472 - 37264347
Alignment:
Q  60 tttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    ||||||||||| ||||||||||||||||| | ||||| | ||  ||||||||||||| |||| | ||| ||| | |||||||| | ||||   |  | ||    
T  37264472 tttgctcatttcacacatattaagaaaaagtatataagtgaa--agagagaaaaatggttttgagtgcccttgtcaagtattgatgcattgctctttatc 37264375  T
Q  159 ataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||    
T  37264374 ataaatgcaaagtagaatatattgaatt 37264347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 38589852 - 38589768
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||| |||| | ||| ||||| || ||||||| |||||| |  | ||||||||| ||||||||||||||||||||    
T  38589852 gagagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 38589768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 45218111 - 45218231
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| ||||| |||||||||| |||||||   || |||||||||||||  |||| | |||  || | |||||||||| |||||| |  | |||||||||    
T  45218111 catttcacacaaattaagaaaagtgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatg 45218210  T
Q  166 caaagtagaatatattgaatt 186  Q
     ||||||||||||||||||||    
T  45218211 taaagtagaatatattgaatt 45218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 1643252 - 1643314
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagaga 109  Q
    |||||| ||| ||||| ||||||| |||||||||||||||||||||||| | || ||||||||    
T  1643252 attaaccgagccatttcctcatttcacacatattaagaaaaatgtataaatgaaagagagaga 1643314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 3781127 - 3781196
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctct 129  Q
    ||||||||||| ||||||||| | |||||||||| | ||||||| | ||||||||| |||||| ||||||    
T  3781127 tttgctcatttcacacatattgaaaaaaatgtattagtaaatgaaaaagaaaaatggttttaagtgctct 3781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 6591565 - 6591614
Alignment:
Q  137 tattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||  |||||||| | ||||||||||||||||||||||||||||||    
T  6591565 tattggtcaattctccattatcataaatgcaaagtagaatatattgaatt 6591614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 183
Target Start/End: Original strand, 23111022 - 23111159
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||  |||  ||||||| | || |||||||||||| ||||||| | ||  |||||||||||||||||| | ||   |||| || ||||||| |    
T  23111022 attaactgagctattaactcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgc 23111121  T
Q  146 attctccactgtcataaatgcaaagtagaatatattga 183  Q
    ||||| |  | ||||||||| |||||||||||||||||    
T  23111122 attcttctttatcataaatgtaaagtagaatatattga 23111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 8150114 - 8149999
Alignment:
Q  65 tcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    |||||| ||||||||||||||||| ||||||| | || |||||||||||||| |||||| || | || | || |||| || |||| |||| | |||||||    
T  8150114 tcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtg-ttttgtcaaatatttgtgcattttccattatcataaa 8150016  T
Q  164 tgcaaagtagaatatat 180  Q
      |||||||||||||||    
T  8150015 atcaaagtagaatatat 8149999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 40590844 - 40590896
Alignment:
Q  132 ttaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaa 184  Q
    |||||||||||| |||| ||| || |||||||| |||||||||||||||||||    
T  40590844 ttaagtattggtgcattttccgctatcataaatacaaagtagaatatattgaa 40590896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 21446609 - 21446506
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||| |||| || |||||||||| || |||||||||||| ||||||| | || ||||||||||||| ||||| | ||  |||||||| |||| || ||    
T  21446609 ttaacttagtccttggctcattttatacttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgtccttattaattattagtgca 21446510  T
Q  147 ttct 150  Q
    ||||    
T  21446509 ttct 21446506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 31581396 - 31581516
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| | || |||||||||||||||| |  | || |||||| ||||||  |||||| | |  || |||||||||||| ||||||||| | |||||||    
T  31581396 ctcatttcaaacgtattaagaaaaatgtaaa--tgaaggagagataaaaatagttttaagtacatttgttaagtattggtgcattctccaatatcataaa 31581493  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    || ||| | ||||||||||||||    
T  31581494 tgtaaaatggaatatattgaatt 31581516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 34064363 - 34064249
Alignment:
Q  72 acacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaag 170  Q
    ||||||||||| ||||| ||||||| | ||  ||||||||||||  |||| | || |||| |||||||||||| ||||||    | ||||||||| ||||    
T  34064363 acacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtg-tcttgttaagtattggtgcattctttcttatcataaatgtaaag 34064265  T
Q  171 tagaatatattgaatt 186  Q
    ||||||||||||||||    
T  34064264 tagaatatattgaatt 34064249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 27621994 - 27621908
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattc 149  Q
    ||||||| |||| |||||||||||| |||||||| ||| |||| |||||||||||||| | | | ||||| || ||||||| |||||    
T  27621994 ctcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgattttgagtacccttatcaattattggtgcattc 27621908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 5083435 - 5083512
Alignment:
Q  76 atattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcca 153  Q
    ||||||| | |||||||||| |||| || ||| ||||||  |||||| ||||||| |||||||||||| ||| |||||    
T  5083435 atattaaaacaaatgtataaataaaggaaagataaaaatagttttaagtgctcttgttaagtattggtgcatactcca 5083512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 10355779 - 10355808
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  10355779 tcataaatgcaaagtagaatatattgaatt 10355808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 19688077 - 19687993
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||||||| |||||| || |||| | |||||||| |  |||  ||| | |||||||||||||||| |||||||||||||    
T  19688077 gagatagaaaaatgtttttaagtgttcttgtcaagtattgatgaatttaccattatcataaatgcaaagtataatatattgaatt 19687993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 23704034 - 23703950
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||  ||||||  || ||| |||| ||||| | ||||||||||| ||||||||| ||| |  |||||||||||||    
T  23704034 gagagagaaaaatagttttaagcgcacttgttaattattgctgcattctccactatcataaatgtaaaatgaaatatattgaatt 23703950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 39498845 - 39498708
Alignment:
Q  51 actgagtcatttgctcattttacacatattaagaaaaat---gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||||||| ||||||||||| |||| |||||| ||||||   |||| | | ||||||||||||||||  |||||| || || | | ||||||| || |||    
T  39498845 actgagtcttttgctcatttcacacttattaaaaaaaatatagtattagtgaatgagagagaaaaatagttttaaatgttcctgtcaagtatt-gttcat 39498747  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  ||| | |||||||| |||| || |||||||||||||    
T  39498746 ttaccattatcataaattcaaaatataatatattgaatt 39498708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 35646024 - 35646163
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| |||||||||||  || ||| ||||||||||||| |||| ||||| | |||||||||||||||||||||||| || |||| |||||||||||| ||    
T  35646024 attagctgagtcattttttcttttcacacatattaagacaaatatataaatgaatgagagagaaaaatgattttaagtgatcttgttaagtattggtgca 35646123  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  35646124 ttctccactatcataaatgcaaagtggaatatattgaatt 35646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 36469023 - 36469168
Alignment:
Q  41 tcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtatt 140  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||||| | || |||| | |||||||||| ||| || | || ||| |||||    
T  36469023 tcctagataaactgagtcagttgctcatttcacacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtatt 36469122  T
Q  141 ggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| ||||||||||| |||||||||||||||| |||||||||||||    
T  36469123 ggtgcattctccactatcataaatgcaaagtataatatattgaatt 36469168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 24231180 - 24231044
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||| |||||||||| | ||    
T  24231180 attaactgagtcatttgctcatttctcaca-attaagaaaaatgtataag--aatgagagagaaaaatgattttaactgttcttgttaagtattgatgca 24231084  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||  |||||||| ||||| ||||||||||||||    
T  24231083 ttctccactaccataaatggaaagtggaatatattgaatt 24231044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 42575573 - 42575712
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| ||||| |||||  |||||| ||||||||||||| |||||||||| | ||||||||||||||||| |||||| |||||||  |||||||||||  |    
T  42575573 attagctgagccattttttcatttcacacatattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgctcttggtaagtattggtgta 42575672  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  42575673 ttctccactatcataaatgcaaagtggaatatattgaatt 42575712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 17242882 - 17243028
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||| ||||||| |||||||||||||||  | ||||||||||||| |||||||||| | ||||||||||||||||| |||| | | ||||| ||||||||    
T  17242882 gtcccagattaagtgagtcatttgctcaaatcacacatattaagacaaatgtataaatgaatgagagagaaaaatggtttttagtactcttgttaagtat 17242981  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||  |||||| ||| ||||||||||||||| ||||||||||||||    
T  17242982 tggtctattctctactatcataaatgcaaagtggaatatattgaatt 17243028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 36446617 - 36446761
Alignment:
Q  41 tcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtatt 140  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||| | || |||| | |||||||||| ||| || | || ||| |||||    
T  36446617 tcctagattaactgagtcatttgctcattc-acacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtatt 36446715  T
Q  141 ggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     || ||||||||||| |||||||||||||||| |||||||||||||    
T  36446716 tgtgcattctccactatcataaatgcaaagtataatatattgaatt 36446761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 858509 - 858369
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||| |||||| |  |||| |||| |||||||||    
T  858509 gattgactgagtcatttgctcatttcacacatattaagaaaaatgtataaataaaggagagaaaaaaatggttttaagttatcttgttaaatattggtac 858410  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | ||||||||||||| |  |||||||| ||||    
T  858409 attctccattatcataaatgcaaaatgaaatatatttaatt 858369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 39183557 - 39183701
Alignment:
Q  42 cctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattg 141  Q
    |||||||||| |||||||||||  ||||| |||||||||||||||||||||||| | ||  ||||| |||||||||||||| |||| |  ||||||||||    
T  39183557 cctagattaagtgagtcatttgtccatttcacacatattaagaaaaatgtataaatgaaaaagagataaaaatgattttaagtgctttcgttaagtattg 39183656  T
Q  142 gtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |  |||||||||| ||||||||||||||| ||||||||||||||    
T  39183657 atgaattctccactatcataaatgcaaagtggaatatattgaatt 39183701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 35334461 - 35334600
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||||||||||||||  | ||| ||||||||| |||| ||||| | || |||||||||||||  |||||| ||||||||||||||||| ||  |    
T  35334461 attaactgagtcatttgctcaaatcacagatattaagacaaatatataaatgaaggagagagaaaaatagttttaagtgctcttattaagtatttgtcta 35334560  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  35334561 ttctccactatcataaatgcaaagtggaatatattgaatt 35334600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 33988375 - 33988234
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||||||||||||||||  | ||||||||||||| |||||||||| | || |||| ||||||||| |||||| || | || ||||||||||||     
T  33988375 agattaactgagtcatttgctcaaatcacacatattaagacaaatgtataaatgaaggagaaagaaaaatggttttaagtgtttttgttaagtattggtg 33988276  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||||||||| ||||||||| ||||| ||||||||||||||    
T  33988275 tattctccactatcataaatgtaaagtggaatatattgaatt 33988234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 3725360 - 3725220
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||| |||| ||| | ||||||| ||||||||||||||||||||||||   || |||||||||||||| |||||| |||| || |||||||||||| |    
T  3725360 gattaattgagccatattctcatttcacacatattaagaaaaatgtataaaggaaggagagagaaaaatggttttaagtgctattgttaagtattggtgc 3725261  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||||| ||| |||||||| |||||    
T  3725260 attctccactatcataaatgcatagtggaatatatcgaatt 3725220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 11099429 - 11099551
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||||||||||||||||||||||| | || |||||||||||||  |||||| || | || |||||||||||| ||||||||||| |||||||    
T  11099429 ctcatttcacacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataaa 11099528  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    | |||||| ||||||||||||||    
T  11099529 tacaaagtggaatatattgaatt 11099551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 22582828 - 22582945
Alignment:
Q  68 ttttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgca 167  Q
    ||||||||||||||||| |||| ||||| | ||| |||||||||||||||||||| ||||||| ||||||| || | ||||||||||| |||||||||||    
T  22582828 ttttacacatattaagacaaatatataaatgaataagagagaaaaatgattttaagtgctcttgttaagtaatgatgcattctccactatcataaatgca 22582927  T
Q  168 aagtagaatatattgaatt 186  Q
    |||| ||| ||||||||||    
T  22582928 aagtggaa-atattgaatt 22582945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 7613862 - 7613741
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||||||||||||||||||||||| | || || ||||||||||  |||||| ||| ||| |||||||||||| ||||||||||| ||||||||    
T  7613862 tcatttaacacatattaagaaaaatgtataaattaaggaaagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaat 7613763  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | |||||  |||||||||||||    
T  7613762 gtaaagtgaaatatattgaatt 7613741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 42211518 - 42211367
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| ||||||| | |||||| ||||||||||||||||| ||||||||||| |||||||||||| | || | | |||||||||| |||||| |||||||    
T  42211518 actccctctgtcccaaattaaccgagtcatttgctcatttcacacatattaaaaaaaatgtataaatgaaggtgggagaaaaatggttttaagtgctctt 42211419  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||||||||  ||  ||| |||||| |||||||||||||||  |||||||||||||    
T  42211418 gttaagtat--gt--attttccactatcataaatgcaaagtgaaatatattgaatt 42211367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 16283521 - 16283661
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||||| ||||| |||||| |||  |||||| |||||||||||| | || |||||| ||||||| |||||| || | || ||| |||||||| |    
T  16283521 gattaactgagttatttgatcatttcacatgtattaaaaaaaatgtataaatgaaggagagaaaaaaatggttttaaatgattttgttatgtattggtgc 16283620  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||| ||| ||||||||||||||| ||||||||||||||    
T  16283621 attctcaactatcataaatgcaaagtggaatatattgaatt 16283661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 6611009 - 6610871
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    ||||||||| ||  || |||||| ||| | |||||||||||||||| | | || ||||||||||||||| ||||| || | ||||||||||||||| |||    
T  6611009 ttaactgagccaaatgatcatttcacatagattaagaaaaatgtatcaatgaaggagagagaaaaatgagtttaagtgtttttattaagtattggtgcat 6610910  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| ||||||||| |||||  |||||||||||||    
T  6610909 tctccactatcataaatgtaaagtgaaatatattgaatt 6610871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 39008305 - 39008162
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| ||||| |||||  |||||||||||||||||| | |||||||||| | || |||||||||||||| |||||| ||||||| |||||||||||| ||    
T  39008305 attagctgagccattttttcattttacacatattaaaacaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggttca 39008206  T
Q  147 ttctccactg----tcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||     ||||||||| |||||  |||||||||||||    
T  39008205 ttctccactaactatcataaatgtaaagtgaaatatattgaatt 39008162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 8369681 - 8369770
Alignment:
Q  97 taaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||||||||||||  |||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  8369681 taaaggagagagaaaaattgttttaaatgctcttgttaagtattggtgcattctccactatcataaatgcaaagtggaatatattgaatt 8369770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 25814538 - 25814398
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||   ||| |||| |||| |||||||||||||| |||| | || |||||||||||||  |||||| ||| ||| ||||||||||||||    
T  25814538 gattaactgagccaaaagcttatttcacacgtattaagaaaaatgcataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtac 25814439  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||| ||||||||| |||||  |||||||||||||    
T  25814438 attatccactatcataaatgtaaagtgaaatatattgaatt 25814398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 7311118 - 7311254
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||||| ||| || |||| | || ||||||||||||||||| | ||||  ||||||||||||| |||||| ||||||||| ||||||| || |||    
T  7311118 ttaagtgagtcttttactgatttcatacttattaagaaaaatgtattaataaa--agagagaaaaatggttttaagtgctcttatcaagtatttgtgcat 7311215  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  ||| | ||||||||||||||||||||||||||||||    
T  7311216 ttaccattatcataaatgcaaagtagaatatattgaatt 7311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 15814816 - 15814701
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||||||||||||| |||| ||| ||||||| |||||||||||| | || ||||||||||||| |||||||  |||||| ||||||||| ||      
T  15814816 gattaactgagtcatttgcttatttcacatatattaaaaaaaatgtataaatgaaggagagagaaaaattattttaagcgctcttgttaagtatttgtgt 15814717  T
Q  146 attctccactgtcata 161  Q
    ||| |||||| |||||    
T  15814716 attttccactatcata 15814701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 8692778 - 8692892
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||||||||| |||| ||||| | || ||| |||||||||| |||||| || |||| |||||||||||| ||||||||||| ||||||||||||| |    
T  8692778 acacatattaagacaaatatataaatgaaggagggagaaaaatggttttaagtgttcttgttaagtattggtgcattctccactatcataaatgcaaaat 8692877  T
Q  172 agaatatattgaatt 186  Q
      |||||||| ||||    
T  8692878 gaaatatattaaatt 8692892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 32539822 - 32539701
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| ||||||||||||| ||||| ||||   || |||||| ||| ||| |||||| |||| |||||| |||||||| ||||||||||| |||    
T  32539822 tttgctcatttcacacatattaagataaatgaataaacgaaggagagacaaagatggttttaagtgcttttattatgtattggtgcattctccactatca 32539723  T
Q  160 taaatgcaaagtagaatatatt 181  Q
    |||||| ||| || ||||||||    
T  32539722 taaatgtaaaataaaatatatt 32539701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 33012528 - 33012388
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||||||||||||| | ||||||||| ||  | |||||| | ||  ||||| ||||||| |||||| ||||||| ||||||||| || |    
T  33012528 gattaactgagtcatttgctcatttcatacatattaataaggacgtataaatgaagaagagataaaaatggttttaagtgctcttgttaagtatttgtgc 33012429  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||| | | |||| |||||| |||||||| |||||    
T  33012428 attcaccactcttagaaattcaaagtggaatatatagaatt 33012388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 39060368 - 39060492
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgt 157  Q
    ||||||||||||| |||| ||||||||||||| ||| | | || |||||||||||||| |||| | |||  || |||||||||||| |||||| |  | |    
T  39060368 catttgctcatttcacacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgcatttgttaagtattggtccattcttctttat 39060467  T
Q  158 cataaatgcaaagtagaatatattg 182  Q
    ||||||||||||||||| |||||||    
T  39060468 cataaatgcaaagtagactatattg 39060492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 5147431 - 5147570
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||||| ||  ||||||| |||| |||||||||||| | ||||| | || || |||||||||||||||| | ||  ||||| || ||||||| ||    
T  5147431 ttaactgagtctttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtccttatcaactattggtgca 5147530  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |  | ||||||||||||||||||||||||||||||    
T  5147531 ttcttctttatcataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 31090477 - 31090338
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||||| ||  |||||||||||  |||||||||||| ||||||| | ||  |||||||||||||||||| | ||| ||||| || ||||||| ||    
T  31090477 ttaactgagtccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattggtgca 31090378  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |  | ||||||| |||||||||||||||| |||||    
T  31090377 ttcttctttatcataaacgcaaagtagaatatatggaatt 31090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 38979077 - 38978938
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||| ||||| ||||||| |||| |||||||||||| |||| ||   || |||| ||||||||| |||| | ||| |||||||| ||||||||||    
T  38979077 ttaactgagccatttactcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaatggttttgagtgcccttattaactattggtaca 38978978  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||  |  | ||||||||||||||||||||||||| ||||    
T  38978977 ttcctctttatcataaatgcaaagtagaatatattaaatt 38978938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 41594794 - 41594904
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtc 158  Q
    |||||||||||| | |||||||||||||||| ||||| | |||||||||||||||| ||||||| || | || | |||||||||| ||||| ||| | ||    
T  41594794 atttgctcatttcatacatattaagaaaaatatataagtgaatgagagagaaaaataattttaaatgtttttgtcaagtattggt-cattcaccattatc 41594892  T
Q  159 ataaatgcaaag 170  Q
    ||||||||||||    
T  41594893 ataaatgcaaag 41594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 25344667 - 25344812
Alignment:
Q  39 tgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaat-gattttaactgctcttattaagt 137  Q
    ||||||||||||| | |||||||| ||||||| ||||||| |||||||||||||||| | || |||||||||||||   |||||| ||   || | || |    
T  25344667 tgtcctagattaagtaagtcatttcctcatttcacacatactaagaaaaatgtataagtgaaagagagagaaaaatattttttaagtg---ttgtcaaat 25344763  T
Q  138 attggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| || ||||| ||| | ||||||||| ||||||||||||||||||||    
T  25344764 attagtgcattcaccattatcataaatgtaaagtagaatatattgaatt 25344812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 26330416 - 26330282
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||||||| | || |||||| ||    | |||||||| ||||| | ||||||| || ||    
T  26330416 attaagtgagtcatttgctcattttacacttattaa-aaaaatgtataaatgaaggagagacaa----ggttttaactactcttgtcaagtattagttca 26330322  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||  ||| | ||||||||||||||| ||||||||||||||    
T  26330321 tttaccattatcataaatgcaaagtggaatatattgaatt 26330282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 42819060 - 42818938
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    ||||||| |||| |||||||||||| ||||||| |||| |||| ||||||||| |||| | ||| ||||||||  |||||| |||||| |  | ||||||    
T  42819060 ctcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatcataa 42818961  T
Q  163 atgcaaagtagaatatattgaat 185  Q
    ||| |||||||||||||||||||    
T  42818960 atgtaaagtagaatatattgaat 42818938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 35585562 - 35585690
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgt 157  Q
    |||||||| |||| |||||||||||||||||||||||| |    || | |||||||||||||||| |  |||| |||||||||| | |||| |||||| |    
T  35585562 catttgcttatttcacacatattaagaaaaatgtataaatgggggaaaaagaaaaatgattttaaatattcttgttaagtattgatgcattatccactat 35585661  T
Q  158 cataaatgcaaagtagaatatattgaatt 186  Q
    ||||||  ||||||  |||||||||||||    
T  35585662 cataaagacaaagtgaaatatattgaatt 35585690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 15254922 - 15254799
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||| ||| |||| ||||||||||||||||||| |  | || | |||||||||||||||| || | || ||| ||||| || |||||||| || |||| |    
T  15254922 gctcctttcacacgtattaagaaaaatgtataaatggaggaaaaagaaaaatgattttaagtgtttttgttatgtattagtgcattctccgctatcatta 15254823  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||||    
T  15254822 atgcaaattagaatatattgaatt 15254799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 41184849 - 41184730
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || |||| |||||||||||| ||   |||||||| |||| ||||||||||||||||||| | || |||| ||||||||  |||||| ||| |||    
T  41184849 actccctccgtcccagattaactgagccaaaagctcatttcacacgtattaagaaaaatgtataaatgaaggagaaagaaaaatagttttaagtgcactt 41184750  T
Q  131 attaagtattggtacattct 150  Q
     |||||||||||| ||||||    
T  41184749 gttaagtattggtgcattct 41184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 6172916 - 6173054
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||||| ||| ||||||| |||| ||||||||||||||||| | | ||  ||||| ||||||  |||||| ||||||||| || ||||  | |||    
T  6172916 ttaagtgagtcttttcctcatttcacacttattaagaaaaatgtattagtgaagaagagataaaaatagttttaagtgctcttatcaaatattaatgcat 6173015  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  ||| | |||||||||||||||| |||||||||||||    
T  6173016 ttaccattatcataaatgcaaagtataatatattgaatt 6173054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 5357763 - 5357887
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgt 157  Q
    ||||||||||||  |||| ||||||||||||| ||| | | || |||||||||||||| |||| | ||   || |||||||||||| |||||| |  | |    
T  5357763 catttgctcattacacacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgtctttgttaagtattggttcattcttctttat 5357862  T
Q  158 cataaatgcaaagtagaatatattg 182  Q
    |||||||| ||||||||||||||||    
T  5357863 cataaatgtaaagtagaatatattg 5357887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 13016314 - 13016437
Alignment:
Q  63 gctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcata 161  Q
    |||||||| |||| |||||||||||| |||| || | || ||||||||||||||| ||| | ||  ||||| || ||||||| |||||||   | |||||    
T  13016314 gctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgcattctctt-tatcata 13016412  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||||    
T  13016413 aatgcaaagtagaatatattgaatt 13016437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 13087692 - 13087815
Alignment:
Q  63 gctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcata 161  Q
    |||||||| |||| |||||||||||| |||| || | || ||||||||||||||| ||| | ||  ||||| || ||||||| |||||||   | |||||    
T  13087692 gctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgcattctctt-tatcata 13087790  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||||    
T  13087791 aatgcaaagtagaatatattgaatt 13087815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 15898309 - 15898225
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||| ||||| ||  |||||||| ||||| | |||||| |  | ||||||||||||||||||||||||||||||    
T  15898309 gagagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaatt 15898225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 4044414 - 4044551
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| ||||||||||  | |||| ||||| |||||||||| ||||||| | ||  ||| | ||||| |||||| | |||| |||| |||||||||| |||    
T  4044414 ttaattgagtcattttttgatttcacacagattaagaaaagtgtataaatgaaa-agaaaaaaaaaagattttgaatgcttttatcaagtattggtgcat 4044512  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |  | ||||||||| ||||||||||||||||||||    
T  4044513 tcttctttatcataaatgtaaagtagaatatattgaatt 4044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 4576358 - 4576480
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| |||||||||||||||||||||||| | ||  | |||||||||   |||||| || |||| | |||||||||| || || ||| | |||    
T  4576358 tttgctcatttcacacatattaagaaaaatgtataaatgaaaaaaagagaaaaacagttttaagtgttcttgtcaagtattggtgca-tcaccattatca 4576456  T
Q  160 taaatgcaaagtagaatatattga 183  Q
    |||||||||| | ||| |||||||    
T  4576457 taaatgcaaaatggaagatattga 4576480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 9426543 - 9426626
Alignment:
Q  103 agagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||| ||||   |||| ||||||| |||||||| ||| | ||||||||||||||| ||| || |||||||    
T  9426543 agagagaaaaatgatttttactgtgtttatcaagtattagtacattcaccattatcataaatgcaaagtggaagatgttgaatt 9426626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 13135916 - 13135787
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||| |||||||||| |||||| |||| ||||||||||| ||||||| | || ||||||||||  || |||||| || | || |        ||| ||    
T  13135916 attaacagagtcatttgttcatttcacacgtattaagaaaactgtataaatgaaggagagagaaa--tggttttaagtgtttttgt--------ggtgca 13135827  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  13135826 ttctccactatcataaatgcaaagtggaatatattgaatt 13135787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 15564832 - 15564962
Alignment:
Q  52 ctgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattct 150  Q
    ||||||| || |||||||| |||| |||||||||||| ||||||| | || ||||||||||||| ||||| | | | ||||| || ||||||| ||||      
T  15564832 ctgagtctttcgctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataattttgagtacccttatcaactattggtgcatt-- 15564929  T
Q  151 ccactgtcataaatgcaaagtagaatatattgaatt 186  Q
        | ||||||||||||||||||||||||| ||||    
T  15564930 ---ttatcataaatgcaaagtagaatatattaaatt 15564962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 4195088 - 4194975
Alignment:
Q  66 cattttacacatattaagaaaaa--tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||| |||| ||||||||||||  ||||||| |||| |||||||||||||| |||| | ||| ||||| || ||||| | |||||| |  | |||||||    
T  4195088 catttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgagtgcccttatgaactattgatgcattcttctttatcataaa 4194989  T
Q  164 tgcaaagtagaata 177  Q
    || |||||||||||    
T  4194988 tgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 6735377 - 6735431
Alignment:
Q  132 ttaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||    
T  6735377 ttaagtatttgtgcattctccactatcataaatgcaaagtggaatatattaaatt 6735431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 20190080 - 20189926
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatga-ttttaactgctct 129  Q
    |||||||| || || ||||||||||| ||   ||||||||  ||| |||||||||||||| |||| | || |||||| |||||  | |||||| |||  |    
T  20190080 actccatccgttctggattaactgagccaaaagctcattt--cacgtattaagaaaaatgcataaatgaaggagagataaaaaatagttttaagtgcatt 20189983  T
Q  130 tattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | ||||||| || | ||||||||| | ||||||||| ||||| ||||||||||||||    
T  20189982 tgttaagtactgatgcattctccattatcataaatgtaaagtggaatatattgaatt 20189926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 28057782 - 28057859
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattg 141  Q
    ||||||| |||| || |||||||||||||||| | || ||||||||||||| ||||||| ||  ||| ||||||||||    
T  28057782 ctcatttcacacgtactaagaaaaatgtataaatgaaggagagagaaaaataattttaaatgtacttgttaagtattg 28057859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 35667039 - 35666922
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||  ||||||||||||| ||| ||| || ||||||  |||||  |||||| |||| || |||||||||||| ||||  ||| | | |||||    
T  35667039 ctcatttcacatttattaagaaaaatttattattgaaggagaga--aaaatagttttaagtgcttttcttaagtattggtgcatttaccattattataaa 35666942  T
Q  164 tgcaaagtagaatatattga 183  Q
    | ||||||||||||||||||    
T  35666941 tacaaagtagaatatattga 35666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 16926036 - 16926165
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgta---taattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactg 156  Q
    ||||||||||| ||||||||||| | || ||||   ||| | || ||| |||||||||| |||| | |||  |  |||||||||||| |||||| |  |     
T  16926036 tttgctcatttcacacatattaaaagaagtgtagtataagtgaaagagtgagaaaaatggttttgagtgccttcgttaagtattggtgcattcttcttta 16926135  T
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||||||||||    
T  16926136 tcataaatggaaagtagaatatattgaatt 16926165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 36006849 - 36006966
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| ||||| |||||||||||||||||| |||| ||||||   ||||| |||||| ||   || | ||||||| || |||||| |  | |||||||||    
T  36006849 catttcacacagattaagaaaaatgtataaataaaagagaga---aaatggttttaagtgtctttgtcaagtatttgtgcattcttctttatcataaatg 36006945  T
Q  166 caaagtagaatatattgaatt 186  Q
     ||||||||||||| ||||||    
T  36006946 taaagtagaatatactgaatt 36006966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 39060999 - 39061028
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  39060999 tcataaatgcaaagtagaatatattgaatt 39061028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 39212596 - 39212625
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  39212596 tcataaatgcaaagtagaatatattgaatt 39212625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 146675 - 146774
Alignment:
Q  86 aaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaat 185  Q
    |||||||||  | ||||| ||||||||||| |||||| || | || ||| ||||||||  ||| | || |||  ||||||||||||||||||||||||||    
T  146675 aaatgtatatatgaatgatagagaaaaatggttttaagtgtttttgtta-gtattggtctattatacaatgtgctaaatgcaaagtagaatatattgaat 146773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 4412520 - 4412436
Alignment:
Q  81 aagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||||||||||||| | || |||||||||||||||| |||| |   ||| |||||||||| | ||||||| ||| | |||||||    
T  4412520 aagaaaaatgtataaatgaaggagagagaaaaatgatattaagtctacttgttaagtattgatgcattctctactattataaatg 4412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 27902698 - 27902654
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatg 90  Q
    |||||| ||||| |||| ||||||| |||||||||||||||||||    
T  27902698 gattaagtgagtaatttactcatttcacacatattaagaaaaatg 27902654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 42870939 - 42870987
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatg 115  Q
    |||| ||| |||||||||||||||||||| | |||||||||||| ||||    
T  42870939 atttcacatatattaagaaaaatgtataaatgaatgagagagaagaatg 42870987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 42926323 - 42926168
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || ||||| |||||| ||||||||| | |||||| |||||||||||||||||||||||| | ||||| |||||||||||||||||| || | ||    
T  42926323 actccctccgtcctggattaagtgagtcattcgatcatttgacacatattaagaaaaatgtataaatgaatgaaagagaaaaatgattttaagtgttttt 42926224  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||||||| ||| ||||||||||| ||||||||||||| |  |||||||||||||    
T  42926223 gttaagtatcggtgcattctccactatcataaatgcaaaatgaaatatattgaatt 42926168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 49945115 - 49944981
Alignment:
Q  37 tctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaag 136  Q
    |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||| | ||  ||||||||||||| |||||| ||||||| |||||    
T  49945115 tctgtcctggattaactaagtcatttgctcatttcacacatattaagaaaaatgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaag 49945016  T
Q  137 tattggtacattctccactgtcataaatgcaaagt 171  Q
    |||| || |||||| | || |||||||||||||||    
T  49945015 tatttgtgcattcttctctatcataaatgcaaagt 49944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 27391526 - 27391381
Alignment:
Q  41 tcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtatt 140  Q
    ||||| ||||| ||||||||||| ||| || |||| ||||| ||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||    
T  27391526 tcctaaattaagtgagtcatttgttcaattcacacttattacgaaaaatgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtatt 27391427  T
Q  141 ggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| ||||  | | | ||||||||||||||| ||||||||||||||    
T  27391426 ggttcatttactattatcataaatgcaaagtggaatatattgaatt 27391381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 5040493 - 5040649
Alignment:
Q  30 cactccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctct 129  Q
    |||||| || |||| ||||||| |||||| ||||||||||| ||||||||| ||| |||||||||| | ||||||||||||||||| |||||  || |||    
T  5040493 cactccctccgtcccagattaagtgagtcctttgctcatttcacacatatttagacaaatgtataaatgaatgagagagaaaaatggttttaggtgatct 5040592  T
Q  130 tattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | |||||||||| | ||||||||||| |||||||||| ||||  |||||||||||||    
T  5040593 tgttaagtattgatgcattctccactatcataaatgcgaagtgaaatatattgaatt 5040649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 8327891 - 8327751
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||| ||||||||||||||  | |||||| |||||| |||||||||| | |||||||||||||||| ||||||| ||||||| ||||||||||||      
T  8327891 gattaacggagtcatttgctcaaatcacacattttaagacaaatgtataaatgaatgagagagaaaaataattttaagtgctcttgttaagtattggtct 8327792  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||| || ||||||||||||| | ||||||||||||||    
T  8327791 attctcccctatcataaatgcaaaatggaatatattgaatt 8327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 32348392 - 32348252
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||||||||  | ||||||||||||| |||||||||| | || |||||||||||||| |||||| ||||||| ||||||||||||      
T  32348392 gattaactgagccatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtct 32348293  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||| ||| ||||||||||| ||||||||||||||    
T  32348292 attttccactatcacaaatgcaaagtggaatatattgaatt 32348252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 13500661 - 13500803
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagag--agaaaaatgattttaactgctcttattaagtattggt 143  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||| | ||||||||  ||| |||||||||||| |||| || ||| ||||||||    
T  13500661 gattaactgggtcaattgcttattttacacatattaagaaaaatgtataaatgaatgagagaaagagaaatgattttaagtgcttttgttatgtattggt 13500760  T
Q  144 acattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||||| |||| ||||||||||||||| ||| ||||||||||    
T  13500761 gcattcttcactatcataaatgcaaagtggaaaatattgaatt 13500803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 28839528 - 28839373
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    |||||||| ||||  |||||| |||| ||||||||||  | ||| ||||||||| |||||||||| | || |||||||||||||  |||||| |||||||    
T  28839528 actccatccgtcccggattaattgagccatttgctcaaatcacatatattaagacaaatgtataaatgaaggagagagaaaaatagttttaaatgctctt 28839429  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||    
T  28839428 gttaagtattggtctattctccactatcataaatgcaaagtggaatatattgaatt 28839373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 5442495 - 5442374
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| |||||||| |||||||||| | ||||||||||||||||| |||||| |  |||| ||||||||| || ||||||||||| ||||||||    
T  5442495 tcatttcacacctattaagacaaatgtataaatgaatgagagagaaaaatggttttaagttatcttgttaagtattagtgcattctccactatcataaat 5442396  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||    
T  5442395 gcaaagtggaatatattgaatt 5442374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 8773417 - 8773281
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatga-ttttaactgctcttattaagtattggta 144  Q
    ||||||||||  |||||||||| || ||||||||||||||||| |||||| | |  ||||||||||||  | |||||| ||||||| ||||||||||||     
T  8773417 gattaactgatccatttgctcaattcacacatattaagaaaaacgtataaatgatcgagagagaaaaaatagttttaagtgctcttgttaagtattggtg 8773318  T
Q  145 cattctccactgtcataaatgcaaagtagaatatatt 181  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  8773317 cattctccactgtcatatatgcaaagtggaatatatt 8773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 51749117 - 51749257
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||  ||||||||||  | ||| ||||||||| |||||||||| | || ||||||||||| ||||||||| || |||| ||||||||||||      
T  51749117 gattaactgatccatttgctcaaatcacatatattaagataaatgtataaatgaaggagagagaaaactgattttaagtgttcttgttaagtattggttt 51749216  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | ||||||||||||||| ||||||||||||||    
T  51749217 attctccattatcataaatgcaaagtggaatatattgaatt 51749257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 36467114 - 36467269
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    |||||||| ||||| |||||| |||| ||   |||||||| |||| ||||||||||||||||||| | ||||||||||||||||  |||||| ||| |||    
T  36467114 actccatccgtcctggattaaatgagccaaaagctcatttcacacgtattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcactt 36467213  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||||||||||||  |||||||||| | ||||||| |||||  |||||||||||||    
T  36467214 gttaagtattggtggattctccactatgataaatgtaaagtgaaatatattgaatt 36467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 45889181 - 45889322
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataatt-aaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||| ||||||||||| |||  | ||| ||||||||| |||||||||| | ||| |||||||||||||| |||||| ||||||| |||| |||||||     
T  45889181 gattaattgagtcatttgttcaaatcacatatattaagacaaatgtataaatgaaaggagagagaaaaatggttttaagtgctcttgttaactattggtc 45889280  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||||||| | ||||||||||||||| ||||||||||||||    
T  45889281 tattctccattatcataaatgcaaagtggaatatattgaatt 45889322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 7785205 - 7785348
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtat-aattaaatgagagagaaaaatgattttaactgctcttat--taagtattgg 142  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||| ||||||||||||  |||||| || | || |  |||||||||     
T  7785205 gattaactgagtcatttgctcatttcacacatactaagaaaaatgtataaatgaaataagagagaaaaatagttttaagtgttattgttataagtattga 7785304  T
Q  143 tacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | ||||||||||| ||||||||| |||||  |||||||||||||    
T  7785305 tgcattctccactatcataaatgtaaagtgaaatatattgaatt 7785348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 46880581 - 46880449
Alignment:
Q  54 gagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcca 153  Q
    |||||||||| | |||| |||||||||||||||| ||||||| | || ||||||||||||||||||| |  ||||||||||||||| |||   |||||||    
T  46880581 gagtcatttgtttatttcacacatattaagaaaattgtataaatgaaggagagagaaaaatgattttgagagctcttattaagtatcggtgtcttctcca 46880482  T
Q  154 ctgtcataaatgcaaagtagaatatattgaatt 186  Q
    || ||||||||| ||||| ||||||||| ||||    
T  46880481 ctatcataaatgtaaagttgaatatattaaatt 46880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 49494114 - 49494237
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||| ||||||||||||||||||| | || |||||||||||||  |||||| ||| ||| |||| |||||||  |||||||||| ||||||    
T  49494114 gctcatttcacacgtattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcacttgttaaatattggtcaattctccactatcataa 49494213  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||| ||||| ||||||||||||||    
T  49494214 atgtaaagtggaatatattgaatt 49494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 3555489 - 3555629
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||| |||| ||||||||||  | | | ||||||||| |||||||||| | || || || |||||||| |||||| |||| || ||||||||||||      
T  3555489 gattaattgagccatttgctcaaatcatagatattaagacaaatgtataaatgaaggatagggaaaaatggttttaagtgctttttttaagtattggtct 3555588  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  3555589 attctccactatcataaatgcaaagtggaatatattgaatt 3555629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 17343007 - 17342862
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaa-tgtataa-ttaaatga----gagagaaaaatgattttaactgctcttattaagtatt 140  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||    ||| |||||||| |||||| || | || |||||||||    
T  17343007 attaactgagtcatttgctcatttcacagatattaagaaaaaatgtataaattaaatgaaggagagggaaaaatggttttaagtgtttttgttaagtatt 17342908  T
Q  141 ggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| ||||||||| | |||||||| ||||||  |||||||||||||    
T  17342907 ggtgcattctccattatcataaatacaaagtgaaatatattgaatt 17342862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 50267372 - 50267512
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||   | |||||| |||| ||||||||||||||||||| | || | |||||||||||  |||||| ||| ||| |||||||||||| |    
T  50267372 gattaactgagtcaaaagttcatttcacacgtattaagaaaaatgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgc 50267471  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | ||||||||| |||||  |||||||||||||    
T  50267472 attctccattatcataaatgtaaagtgaaatatattgaatt 50267512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 46536513 - 46536374
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||||||||||||| ||| |||  ||||||||||||| ||||  | || || ||||||||||| |||||| ||||||| |||| ||||| |  |    
T  46536513 attaactgagtcatttgctcgtttcacatgtattaagaaaaatttatagatgaaggaaagagaaaaatggttttaagtgctcttgttaaatattgttgta 46536414  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| |||||||| |||||| ||||||||| ||||    
T  46536413 ttctccactatcataaatacaaagtggaatatattaaatt 46536374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 17724650 - 17724788
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    ||||||||| | |||||||| || |||| | ||||||||||||||  | | || |||||||||||||  |||||| ||||||| |||| ||||| | |||    
T  17724650 ttaactgagacttttgctcaattcacacttgttaagaaaaatgtaataatgaaggagagagaaaaattgttttaagtgctcttgttaattattgatgcat 17724749  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||  ||||||||||||||||||| |||||||||    
T  17724750 tctccactaccataaatgcaaagtagaatttattgaatt 17724788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 21304575 - 21304418
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaa--tgattttaactgctc 128  Q
    ||||| |||||||  |||||||||||||||||| |||||| | ||||||||| |||| |||||||   || ||||||||||||  ||||||||| || ||    
T  21304575 actccctctgtcccggattaactgagtcatttgttcatttcatacatattaaaaaaattgtataaacgaaggagagagaaaaaaatgattttaagtgatc 21304476  T
Q  129 ttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || ||| ||||  || ||||||| ||| |||||||||||||||  |||||||||||||    
T  21304475 ttgttatgtatcagtgcattctcgactatcataaatgcaaagtgaaatatattgaatt 21304418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 32587921 - 32587799
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||||||||||||||||||||||| | || | ||||||||||| ||||||| || | || |||||||||| | |||| |||| | |||||||    
T  32587921 ctcatttcacacatattaagaaaaatgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataaa 32587822  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    ||||||||  |||||||||||||    
T  32587821 tgcaaagtgaaatatattgaatt 32587799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 34814077 - 34813951
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| |||| ||||||||||||||||| | | || |||||||||||||  |||||| || |||| ||||||||| || ||||   || | |||    
T  34814077 tttgctcatttcacacttattaagaaaaatgtattagtgaaggagagagaaaaatagttttaagtgttcttgttaagtattagtgcatttatcattatca 34813978  T
Q  160 taaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||||||    
T  34813977 taaatgcaaagtagaatatattgaatt 34813951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 52830365 - 52830488
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||| |||||| |||||||||||| | || ||||||||||||| ||||| | |||  || |||||||||||| |||| |||||| ||||||    
T  52830365 gctcatttcacacgtattaaaaaaaatgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcataa 52830464  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||| ||||| ||||||||| ||||    
T  52830465 atgtaaagtggaatatattcaatt 52830488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 16040249 - 16040115
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||||||||||||||||| |||  ||||||||||||| ||| | | || |||||||||||||| |||||| ||   || |||||||||||| |||    
T  16040249 ttaattgagtcatttgctcatttcacatttattaagaaaaatatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcat 16040150  T
Q  148 tctccactgtcataaatgcaaagtagaatatattg 182  Q
    ||| |  | ||||||||| ||||||||||||||||    
T  16040149 tcttctttatcataaatgtaaagtagaatatattg 16040115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 40061989 - 40061843
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||||| |||||  |||| |||||||  ||| |||| |||||| | ||||||||||   ||  |||||||||||||||||||| || |||||| ||||||    
T  40061989 gtcctaaattaagggagttatttgcttttttcacacttattaaaagaaatgtataagcgaagaagagagaaaaatgattttaaatgttcttatcaagtat 40061890  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |||||| | || | ||||||||||||| ||||||||||||||||    
T  40061889 tgttacatttttcattatcataaatgcaaattagaatatattgaatt 40061843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 28908268 - 28908152
Alignment:
Q  41 tcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagaga--aaaatgattttaactgctcttattaagta 138  Q
    ||||| ||||| | |||||| || |||||| |||||||||||||||||||||||| | || ||||||||  ||||||||||||| | ||||| |||||||    
T  28908268 tcctaaattaattaagtcatctgttcatttcacacatattaagaaaaatgtataaatgaaggagagagagaaaaatgattttaagtactcttgttaagta 28908169  T
Q  139 ttggtacattctccact 155  Q
    || || |||||||||||    
T  28908168 ttagtgcattctccact 28908152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 40019926 - 40019793
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcc 152  Q
    ||||||||||| |||||||||||  |||||||||||||||||| | ||||||||||||||||  |||||| ||||||| | ||||||| ||  |||| ||    
T  40019926 tgagtcatttgttcattttacactgattaagaaaaatgtataagtgaatgagagagaaaaattgttttaagtgctcttgtcaagtatttgtgtattcacc 40019827  T
Q  153 actgtcataaatgcaaagtagaatatattgaatt 186  Q
    | | |||||||  ||||||  || ||||||||||    
T  40019826 attatcataaagacaaagtgaaaaatattgaatt 40019793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 29756092 - 29756216
Alignment:
Q  63 gctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcata 161  Q
    |||||||| |||| |||||||||||| ||||||| | || ||||||||||||||  ||| | ||| ||||| || ||||||| |||||| |  | |||||    
T  29756092 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcata 29756191  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||||    
T  29756192 aatgcaaagtagaatatattgaatt 29756216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 19532853 - 19532991
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||||||||   |||||||| |||| |||||| |||||| ||||| | || || ||||||||||  |||||| ||  ||| ||||||||||||     
T  19532853 agattaactgagtcaaaagctcatttcacacctattaa-aaaaatatataaatgaaggatagagaaaaatagttttaagtgtacttgttaagtattggtt 19532951  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaa 184  Q
    ||||||||||| ||||||||| |||||  |||||||||||    
T  19532952 cattctccactatcataaatgtaaagtgaaatatattgaa 19532991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 43896003 - 43895881
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||||||||||||||||||||||  | || |||||||||||  | |||||  || | || ||||||||||||   ||||||||| ||||||    
T  43896003 gctcatttcacacatattaagaaaaatgtatagatgaaagagagagaaaatag-ttttatgtgtttttgttaagtattggtgtgttctccactatcataa 43895905  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||||    
T  43895904 atgcaaagttgaatatattgaatt 43895881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 52432485 - 52432346
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| ||||| |||||  || ||| ||||| ||||||| |||||||||| | ||  |||||||||||||||||||| ||||||| |||||||||| | ||    
T  52432485 attagctgagccattttttcttttcacacacattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgctcttgttaagtattgatgca 52432386  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||  |||  |||||||| |||||  |||||||||||||    
T  52432385 ttctttactaccataaatgtaaagtgaaatatattgaatt 52432346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 37925177 - 37925320
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaa----tgagagagaaaaatgattttaactgctcttattaagtattgg 142  Q
    ||||||||||  || |||||||| |||| |||||||||||| ||||||| | ||     ||||||||||||||||||| | ||||||||| || ||||||    
T  37925177 ttaactgagttcttggctcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaattattgg 37925276  T
Q  143 tacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | |||| | |  | ||||||||||||||||||||||||||||||    
T  37925277 tgcatttttctttatcataaatgcaaagtagaatatattgaatt 37925320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 46496203 - 46496052
Alignment:
Q  33 tccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttat 132  Q
    ||||||||| |  ||||||||||| ||||||||||  | ||||||||||||| |||| ||||| | || ||||||  |||||| |||| | || |||| |    
T  46496203 tccatctgttcaggattaactgagccatttgctcaaatgacacatattaagacaaatatataaatgaaggagaga--aaaatggttttgagtgttcttgt 46496106  T
Q  133 taagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||| |  |||||||| | ||||||||||||||| ||||||||||||||    
T  46496105 taaggattgatgtattctccattatcataaatgcaaagtggaatatattgaatt 46496052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 10370139 - 10370257
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagag-aaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    |||||||| |||||||||||||||||||| |||| ||||||| ||||||  |||||| |||| || |||||||||  | |||||| |||  |||||||||    
T  10370139 attttacatatattaagaaaaatgtataaataaaggagagagaaaaaatagttttaagtgcttttgttaagtattaatgcattcttcaccatcataaatg 10370238  T
Q  166 caaagtagaatatattgaatt 186  Q
    ||||||||  |||||||||||    
T  10370239 caaagtag--tatattgaatt 10370257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 26924070 - 26924194
Alignment:
Q  63 gctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcata 161  Q
    |||||||| |||| |||||||||||| |||| || | || ||||||||||||||| ||| | ||| ||||| || ||||||| |||||| |  | |||||    
T  26924070 gctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgcccttatcaactattggtgcattcttctttatcata 26924169  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    ||||||||||| |||||||||||||    
T  26924170 aatgcaaagtataatatattgaatt 26924194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 27209921 - 27210041
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||||||||||| | ||   ||   |||||||||| |||||| |  | |||||||||    
T  27209921 cattttacacatattaagaaaagtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatg 27210020  T
Q  166 caaagtagaatatattgaatt 186  Q
     |||| |||||||||||||||    
T  27210021 taaaggagaatatattgaatt 27210041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 29225345 - 29225482
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaat----gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacatt 148  Q
    |||||| ||||||||||| |||||||||||||||||     |||||| | || ||| ||||||||||||||| | |||  || |||||||||||| ||||    
T  29225345 tgagtcttttgctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaaaatgattttgagtgcctttgttaagtattggtgcatt 29225444  T
Q  149 ctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||    | ||||||||| ||||||||||||||||||||    
T  29225445 cttttttatcataaatggaaagtagaatatattgaatt 29225482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 26583885 - 26583762
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    ||||||| |||| |||||||||||| ||||||| | || ||||||||||||||| ||| | |||  |||| || ||||||| |||||| |  | ||||||    
T  26583885 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcctttatcaactattggtgcattcttctttatcataa 26583786  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||||    
T  26583785 atgcaaaatagaatatattgaatt 26583762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 3718798 - 3718923
Alignment:
Q  60 tttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtca 159  Q
    ||||||||||| |||| ||||||||||||||||| | | || |||||||||||||  |||||| ||||||| | ||||||| || ||||   || | |||    
T  3718798 tttgctcatttcacacttattaagaaaaatgtattaatgaa-gagagagaaaaatagttttaagtgctcttgtcaagtatttgtgcatttatcattatca 3718896  T
Q  160 taaatgcaaagtagaatatattgaatt 186  Q
    |||||| |||||| |||||||||||||    
T  3718897 taaatgtaaagtataatatattgaatt 3718923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 4466090 - 4466224
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||| |||||| |||||| |||| ||||||||||||| ||| | | |||||||||||||||||  ||| | | |  || |||||||||||| |||    
T  4466090 ttaattgagccatttgttcatttcacacttattaagaaaaatatattagtgaatgagagagaaaaatgggtttgagtacctttgttaagtattggtccat 4466189  T
Q  148 tctccactgtcataaatgcaaagtagaatatattg 182  Q
    ||| |  | ||||||||| ||||||||||||||||    
T  4466190 tcttctttatcataaatgtaaagtagaatatattg 4466224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 24131336 - 24131474
Alignment:
Q  48 ttaactgagtcatttg-ctcattttacacatattaagaaaaat-gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||||||||| ||||||| |||| ||||||||||||  |||||| | ||  ||||||||||||| |||| | ||| ||||| || ||| ||| |    
T  24131336 ttaactgagtcatttgactcatttcacacttattaagaaaaagcgtataagtgaa--agagagaaaaatggttttgaatgcccttatcaactataggtgc 24131433  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||| |  | |||||||||||||||| |||||||||||||    
T  24131434 attcttctttatcataaatgcaaagtataatatattgaatt 24131474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 26756109 - 26756010
Alignment:
Q  87 aatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| | |||||||||| |||||  |||||| ||| ||| |||||||||| | ||||||||||| ||||||||  |||||  |||||||||||||    
T  26756109 aatgtataaatgaatgagagaggaaaatagttttaagtgcacttgttaagtattgatgcattctccactatcataaatataaagtgtaatatattgaatt 26756010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 28276987 - 28277112
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgat---tttaactgctcttattaagtattggtacattctccactgtcat 160  Q
    ||||||| ||||  |||||||||||||||||| | || |||||| |||||  ||   ||||| ||| ||| |||||||||||| ||||||||| | ||||    
T  28276987 ctcatttcacacgcattaagaaaaatgtataaatgaaggagagaaaaaaaaaatagttttaagtgcacttgttaagtattggtgcattctccagtatcat 28277086  T
Q  161 aaatgcaaagtagaatatattgaatt 186  Q
    ||||| |||||  |||||||||||||    
T  28277087 aaatgtaaagtgaaatatattgaatt 28277112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 948518 - 948661
Alignment:
Q  45 agattaactgagtcatttgctcattttaca---catattaagaaaaatgtataattaaatgagagagaaa--aatgattttaactgctcttattaagtat 139  Q
    ||||||||||||||||||||| |||| | |   ||||||||||||| |||||||  ||| |||||| | |  |||| ||||| ||||| || |  |||||    
T  948518 agattaactgagtcatttgcttatttcatattacatattaagaaaattgtataaacaaaagagagatagatcaatggttttacctgcttttgt--agtat 948615  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | || ||||||||||| ||||||||||||||| ||||||||||||||    
T  948616 ttgt-cattctccactatcataaatgcaaagtggaatatattgaatt 948661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 30750059 - 30749965
Alignment:
Q  92 ataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||||||||||||||||  |||||| |||| || |||| ||||| |  |||||| ||| ||||||||||||||| | ||||||||||||    
T  30750059 ataaataaatgagagagaaaaatagttttaagtgcttttgttaaatattgatgtattctctactatcataaatgcaaagtggtatatattgaatt 30749965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 30771510 - 30771416
Alignment:
Q  92 ataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||||||||||||||||  |||||| |||| || |||| ||||| |  |||||| ||| ||||||||||||||| | ||||||||||||    
T  30771510 ataaataaatgagagagaaaaatagttttaagtgcttttgttaaatattgatgtattctctactatcataaatgcaaagtggtatatattgaatt 30771416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 36784426 - 36784348
Alignment:
Q  108 gaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||||||||  ||||||| ||||||||| || |||| |||||| |||||||||||||||  |||||||||||||    
T  36784426 gaaatatgattttaggtgctcttgttaagtatttgtgcattttccactatcataaatgcaaagtgaaatatattgaatt 36784348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 48242559 - 48242664
Alignment:
Q  81 aagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatat 180  Q
    ||||||||||||||| | || ||| || ||||||  |||||| ||| |||  ||||||||| | ||| ||||||| ||||||||| ||||| ||||||||    
T  48242559 aagaaaaatgtataaatgaaggagggataaaaatagttttaagtgcacttgataagtattgatgcatcctccactatcataaatgtaaagtggaatatat 48242658  T
Q  181 tgaatt 186  Q
    ||||||    
T  48242659 tgaatt 48242664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 38664578 - 38664435
Alignment:
Q  44 tagattaactgagtcatttgctcatttt-acacatattaagaaaaatgtataattaaatgagagagaaaaat-gattttaactgctcttattaagtattg 141  Q
    ||||||||| ||  ||||| |||||||| |||| | ||||||||| ||||||| |||| ||||||||||||  | |||||| || | || |||||||  |    
T  38664578 tagattaaccgaaccatttactcattttcacacctgttaagaaaagtgtataaataaaggagagagaaaaaaaggttttaa-tgtttttgttaagtaccg 38664480  T
Q  142 gtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || ||||||| ||| ||||||||||||| | ||||||||||||||    
T  38664479 gtgcattctctactatcataaatgcaaaattgaatatattgaatt 38664435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 179
Target Start/End: Complemental strand, 50926904 - 50926788
Alignment:
Q  64 ctcattttacacatattaagaaaaat-gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    ||||||| ||| |||||||||||||| ||||||  ||| |||||||||||||| |||| | |||  || | |||||||||| |||||| |  | ||||||    
T  50926904 ctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgcatttgtcaagtattggtgcattcttctttatcataa 50926805  T
Q  163 atgcaaagtagaatata 179  Q
    ||| |||||||||||||    
T  50926804 atgtaaagtagaatata 50926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 179
Target Start/End: Complemental strand, 6787403 - 6787288
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||| ||||||||||||| |||||   || |||||||||||||  |||||| ||   || |||| |||| ||||||| |||||| |||||||    
T  6787403 ctcatttcacacgtattaagaaaaatatataaacgaaagagagagaaaaatagttttaaatgtatttgttaaatattagtacattatccactatcataaa 6787304  T
Q  164 tgcaaagtagaatata 179  Q
    || ||||| |||||||    
T  6787303 tgtaaagtggaatata 6787288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 25842692 - 25842637
Alignment:
Q  127 tcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattg 182  Q
    |||||||||||||||||||||| || | | ||||||||| ||||||||||||||||    
T  25842692 tcttattaagtattggtacattttctattatcataaatgtaaagtagaatatattg 25842637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 27831963 - 27831880
Alignment:
Q  103 agagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||  |||||| ||| ||| | |||||||||| ||||| ||| | ||||||||||||||| ||| ||||||||||    
T  27831963 agagagaaaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatgcaaagtggaagatattgaatt 27831880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 34332276 - 34332217
Alignment:
Q  54 gagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaa 113  Q
    ||||| |||| |||||| |||||||||||||||||||||||| | || ||||||||||||    
T  34332276 gagtcttttgttcatttcacacatattaagaaaaatgtataagtgaaagagagagaaaaa 34332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 37541048 - 37541187
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| |||||||||   |||||| |||| |||||||||||| ||||||| | || |||||||||||||| |||| | ||   |||| || ||||||| ||    
T  37541048 ttaattgagtcattgattcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgca 37541147  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |  | | ||||||| ||||||||||||||||||||    
T  37541148 ttcttctttattataaatgtaaagtagaatatattgaatt 37541187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 11324406 - 11324332
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgatttta 121  Q
    ||||| ||| |||||| ||||  | |||||||||||||||||||||||| | |||||||||||| |||| |||||    
T  11324406 attaaatgactcatttactcaaatcacacatattaagaaaaatgtataaatgaatgagagagaataatggtttta 11324332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 11425805 - 11425939
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||| ||||||||||||| ||   ||||||||||||| ||| | | || |||||||||||||  |||| | ||   || |||||||||||| |||    
T  11425805 ttaattgagccatttgctcatttcacgtttattaagaaaaatatattagtgaaggagagagaaaaatagttttgagtgtctttgttaagtattggtccat 11425904  T
Q  148 tctccactgtcataaatgcaaagtagaatatattg 182  Q
    ||| |  | ||||||||| ||||||||||||||||    
T  11425905 tcttctttatcataaatgtaaagtagaatatattg 11425939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 11482427 - 11482353
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgatttta 121  Q
    ||||| ||| |||||| ||||  | |||||||||||||||||||||||| | |||||||||||| |||| |||||    
T  11482427 attaaatgactcatttactcaaatcacacatattaagaaaaatgtataaatgaatgagagagaataatggtttta 11482353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 30750498 - 30750444
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaa 100  Q
    ||||||||||||||||| ||||||| | || ||||||||||||||||||| ||||    
T  30750498 gattaactgagtcatttactcatttcatacgtattaagaaaaatgtataaataaa 30750444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 30752309 - 30752255
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaa 100  Q
    ||||||||||||||||| ||||||| | || ||||||||||||||||||| ||||    
T  30752309 gattaactgagtcatttactcatttcatacgtattaagaaaaatgtataaataaa 30752255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 705310 - 705423
Alignment:
Q  74 acatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagta 172  Q
    ||||||||||||||| ||||||| | || |||| |||||||||||||| | ||   |||||||||||| || |||||| |  | ||||| ||| ||||||    
T  705310 acatattaagaaaaaatgtataagttaaagagaaagaaaaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatgtaaagta 705409  T
Q  173 gaatatattgaatt 186  Q
     |||||||||||||    
T  705410 taatatattgaatt 705423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 30903242 - 30903299
Alignment:
Q  127 tcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaa 184  Q
    |||| ||||||||| || |||| |||| | ||||||||||||||||||||||||||||    
T  30903242 tcttgttaagtatttgtgcattttccattatcataaatgcaaagtagaatatattgaa 30903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 5359240 - 5359288
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgatttt 120  Q
    ||||| |||||||||| ||||||| |||| |||||||||||||||||||    
T  5359240 acacagattaagaaaagtgtataaataaaagagagagaaaaatgatttt 5359288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 12267653 - 12267705
Alignment:
Q  134 aagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||| |  | ||||||||| ||||||||||||||||||||    
T  12267653 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 12267705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 28706559 - 28706631
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgatttt 120  Q
    ||||||||| || |||  ||||| ||||||||||| |||||||||||| | ||| ||||||||||||| ||||    
T  28706559 ttaactgagccagttgaccatttcacacatattaaaaaaaatgtataaatgaataagagagaaaaatggtttt 28706631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 33149391 - 33149307
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||  ||| | ||  |||||||| |||||||  ||||| |  | ||||||||||||||||||||||||||||||    
T  33149391 gagagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatatattgaatt 33149307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 25869776 - 25869721
Alignment:
Q  127 tcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattg 182  Q
    ||||||||||||||| |||||| || | | ||||||||| ||||||||||||||||    
T  25869776 tcttattaagtattgatacattttctattatcataaatgtaaagtagaatatattg 25869721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 26760433 - 26760346
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattct 150  Q
    ||||||| |||| |||||||||||| ||||||| | || ||||||||||||||| ||| | | ||||||| || ||||||| ||||||    
T  26760433 ctcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgagtttgagttctcttatcaattattggtgcattct 26760346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 31798535 - 31798452
Alignment:
Q  103 agagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||| |||| | ||| ||||| || ||||||| |||| | |  | ||||||||||||||||||||||||||||||    
T  31798535 agagagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatatattgaatt 31798452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 51848654 - 51848768
Alignment:
Q  74 acatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat--tggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||||||| |||||||||| | |  |||| ||||||||  |||||| |||| || |||| |||  ||||  |||||||||| ||||||||  |||||    
T  51848654 acatattaagataaatgtataaatgatggagatagaaaaatagttttaagtgctattgttaaatatattggtgtattctccactatcataaatataaagt 51848753  T
Q  172 agaatatattgaatt 186  Q
     ||||||||||||||    
T  51848754 ggaatatattgaatt 51848768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 2886234 - 2886205
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  2886234 tcataaatgcaaagtagaatatattgaatt 2886205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 27932878 - 27932907
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  27932878 tcataaatgcaaagtagaatatattgaatt 27932907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 29225816 - 29225787
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  29225816 tcataaatgcaaagtagaatatattgaatt 29225787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 31634261 - 31634298
Alignment:
Q  78 attaagaaaaatgtataattaaatgagagagaaaaatg 115  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  31634261 attaagaaaaatgtataaataaaagagagagaaaaatg 31634298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 45305916 - 45305887
Alignment:
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||||||||    
T  45305916 tcataaatgcaaagtagaatatattgaatt 45305887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 21304743 - 21304807
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaa 112  Q
    |||||||||||| ||| |||||| ||| | |||||||||||||||||| | || |||||| ||||    
T  21304743 ttaactgagtcagttgatcatttcacataaattaagaaaaatgtataaatgaaagagagataaaa 21304807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 27698961 - 27698869
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccact 155  Q
    |||||||| |||| ||||||||||||||||||| | || || | | |||||| ||||||| ||| | | |||| |||| || |||||||||||    
T  27698961 gctcatttcacacgtattaagaaaaatgtataaatgaaggaaataaaaaaataattttaagtgcacatgttaattattagtgcattctccact 27698869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 46363361 - 46363485
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctctt-attaagtattggtacattctccactgtcata 161  Q
    ||||||| |||| |||||||||||| ||||||| | |  |||||||| |||||  ||| | ||| ||| || || ||||||| |||||| |  | |||||    
T  46363361 ctcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttatcaactattggtgcattcttctttatcata 46363460  T
Q  162 aatgcaaagtagaatatattgaatt 186  Q
    ||||||||||| |||||||||||||    
T  46363461 aatgcaaagtaaaatatattgaatt 46363485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 565263 - 565138
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||  | || |||| |||||||||||||||| || |||| |||||||||||| |    
T  565263 gattaactgagccatttgcttattttacacattttaagaaaaatgtatatatgaaggagaaagaaaaatgattttaagtgttcttgttaagtattggtgc 565164  T
Q  146 attctccactgtcataaatgcaaagt 171  Q
    |||||||||| |||||||||||||||    
T  565163 attctccactatcataaatgcaaagt 565138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 28572380 - 28572242
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| ||||| |||||  |||||| ||||||||||||| |||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||||||| ||    
T  28572380 attagctgagccattttttcatttcacacatattaagacaaatgtataaataaaggagagagaaaa-tgattttaagtgctcttgttaagtattggtgca 28572282  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| ||||||||||||| |  |||||||||||||    
T  28572281 ttctccactatcataaatgcaaaatgaaatatattgaatt 28572242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 44534443 - 44534556
Alignment:
Q  73 cacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagta 172  Q
    |||||||||||| |||||||||| | || || ||| |||||||||||||| || |||| |||||||||||||||||||||||| |||||||||||||||     
T  44534443 cacatattaagacaaatgtataaatgaaggacagaaaaaaatgattttaaatgttcttgttaagtattggtacattctccactatcataaatgcaaagtg 44534542  T
Q  173 gaatatattgaatt 186  Q
    ||||||||||||||    
T  44534543 gaatatattgaatt 44534556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 2882159 - 2882023
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| |||||||||||| |   ||||||||||||| ||||||| | || |||| |||||||||||||||| ||||||| |||||||||||| |    
T  2882159 attaactgagttatttgctcatttcatgtatattaagaaaaaatgtataaatgaaagagatagaaaaatgattttaagtgctcttgttaagtattggtgc 2882060  T
Q  146 attctccactgtcataaatgcaaagtagaatatattg 182  Q
    |||||||||| |||||||||||||||  |||||||||    
T  2882059 attctccactatcataaatgcaaagtgaaatatattg 2882023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 3123835 - 3123687
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||||||||||| ||||||||||||| |  || |||||| |||||||||||||||||||||||| | ||  |||||||||||| ||||||| |||| |     
T  3123835 actccatctgtcccagattaactgagttaaatgttcatttcacacatattaagaaaaatgtataactgaagtagagagaaaaataattttaagtgctttc 3123736  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatata 179  Q
    ||||||||||||| |||||| |||| |||||||| |||| | |||||||    
T  3123735 attaagtattggtgcattcttcactatcataaatacaaaatggaatata 3123687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 9725067 - 9724912
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || ||||||  |||| |||||||||| ||||||| |||||||||||||||| ||||||| | || |||||||| |||||||||| | |||| ||    
T  9725067 actccctccgtcctaatttaattgagtcattttctcatttcacacatattaagaaaagtgtataaatgaaagagagagagaaatgattttgagtgctttt 9724968  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |||||||||| |||||| |  | ||||||||| ||||||||||||||||||||    
T  9724967 atcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 9724912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 28527137 - 28526998
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | || |||| | ||||||| |||||| ||||||| ||||||||| || ||    
T  28527137 attaactgagtcatttgctcatttcacacatattaagaaaaatgtataaatgaaggagaaaaaaaaatggttttaagtgctcttgttaagtattcgtgca 28527038  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| ||||  |||| ||| ||||| || |||||||||||    
T  28527037 ttcttcactaccatatatgtaaagtggactatattgaatt 28526998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 28301608 - 28301468
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||| || ||||||||||  | ||| ||||||||| |||||||||| | || || ||||||||||| |||||| ||||||| ||||||||||||      
T  28301608 gattaactaagccatttgctcaaatcacatatattaagacaaatgtataaatgaaggaaagagaaaaatggttttaagtgctcttgttaagtattggtct 28301509  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| |||||||||||||||  |||||||||||||    
T  28301508 attctccactatcataaatgcaaagtgaaatatattgaatt 28301468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 7649902 - 7650048
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagta 138  Q
    ||||| |||||||| |||||||||||||||  ||||||||||| ||||| ||||||| | || ||||| | ||||| ||||||| ||||||| |||||||    
T  7649902 gtcctggattaactcagtcatttgctcattccacacatattaataaaaaatgtataaatgaaggagagcgcaaaat-attttaagtgctcttgttaagta 7650000  T
Q  139 ttggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     || | ||||||||||| ||||||||||||||| ||||||||||||||    
T  7650001 ctgatgcattctccactatcataaatgcaaagtggaatatattgaatt 7650048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 33602169 - 33602292
Alignment:
Q  56 gtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccact 155  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||  | ||||||| |||||| ||||||| ||| ||||| || |||||| |||     
T  33602169 gtcatttgctcattttacacatattaagaaaaatgtataaataaaagaggaaaaaaaatggttttaagtgctcttgttatgtattagtgcattcttcacc 33602268  T
Q  156 gtcataaatgcaaagtagaatata 179  Q
     ||||||||||||||| |||||||    
T  33602269 atcataaatgcaaagtggaatata 33602292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 43077644 - 43077799
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| ||||||| |||||||||||||||   | |||||| |||| |||||||| |||||||||| | ||||||||||||||||  |||||| ||  |||    
T  43077644 actccctctgtcccagattaactgagtcaaaagttcatttcacacgtattaagacaaatgtataaatgaatgagagagaaaaatagttttaaatgtactt 43077743  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||| ||||||| |||| |||||||||||||||| |||||  |||||||||||||    
T  43077744 gttaactattggtgcattttccactgtcataaatgtaaagtgaaatatattgaatt 43077799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 45464149 - 45464239
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagt 137  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||    
T  45464149 attaagtgagtcatttgctcatttcacacatattaagaaaaatgtataagtgaatgagagaaaaaaatgattttaaatgctcttgttaagt 45464239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 23685116 - 23684993
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| || ||||||||||||||||||||| |||| ||||||||||| |  |||||| || | || ||||||||| || ||||||||||| ||||||    
T  23685116 gctcatttcacgcatattaagaaaaatgtataaataaaggagagagaaaattagttttaagtgtttttgttaagtattagtgcattctccactatcataa 23685017  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    |||||||||  |||||||||||||    
T  23685016 atgcaaagtgaaatatattgaatt 23684993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 18181172 - 18181286
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||| |||||||||| ||||||| | |  |||||||||||||| |||||| |||| || ||| |||||||| ||||||||||| |||||||||||||||    
T  18181172 acacagattaagaaaagtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgcaaagt 18181271  T
Q  172 agaatatattgaatt 186  Q
    ||||||| |||||||    
T  18181272 agaatattttgaatt 18181286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 28925799 - 28925921
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||| ||||||||||||||||||| |||| |||||||||||||  |||||| ||| ||| |||||||||| | ||||||||||| ||||||     
T  28925799 ctcatttcacacgtattaagaaaaatgtataaataaaggagagagaaaaatagttttaagtgcacttgttaagtattgatgcattctccactatcataat 28925898  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    || |||||  |||||||||||||    
T  28925899 tgtaaagtgaaatatattgaatt 28925921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 41436258 - 41436113
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    |||| ||||||||| |||||   |||||||| |||||||||||||||||||||||| | ||| |||||| ||||| ||||||| || | || ||||||||    
T  41436258 gtcccagattaactcagtcaaaagctcatttcacacatattaagaaaaatgtataaatgaattagagag-aaaataattttaagtgtttttgttaagtat 41436160  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || |  ||||| |||| ||||||||||||||| ||||||||||||||    
T  41436159 tgatgtattcttcactatcataaatgcaaagtggaatatattgaatt 41436113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 13375106 - 13375263
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    |||||||| |||| |||||||||||||||    ||||||| |||| ||||||||||||||||||| | || |||||||| |||| ||||||| |||  ||    
T  13375106 actccatccgtcccagattaactgagtcaaaatctcatttcacacgtattaagaaaaatgtataaatgaaggagagagataaataattttaagtgcagtt 13375205  T
Q  131 attaa-gtattggtacattctccactgtcataaatgcaaagt-agaatatattgaatt 186  Q
     |||| |||||||| ||||||||||| ||||||||| ||||| | |||||||||||||    
T  13375206 gttaaggtattggtgcattctccactatcataaatgtaaagtgaaaatatattgaatt 13375263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 2048464 - 2048326
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||||||||| |||  ||||||| |||| |||||| |||||||||||| | || |||||||||||||| || | | ||||||||| || ||||||| |||    
T  2048464 ttaactgagttattgactcatttcacacttattaaaaaaaatgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcat 2048365  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||    | ||||||||||||||||||||||||||||||    
T  2048364 tcttgtttatcataaatgcaaagtagaatatattgaatt 2048326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 6213785 - 6213923
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||| |||||| ||||||||||| |||| |||||||||||||| || | | ||||| |||||||||||||||||| || |||  | |||||||| | |||    
T  6213785 ttaagtgagtcttttgctcatttcacacttattaagaaaaatgaattagtgaatgaaagagaaaaatgattttaagtgttctcgtcaagtattgcttcat 6213884  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  ||| | ||||||||||||||||||||||||| ||||    
T  6213885 ttaccattatcataaatgcaaagtagaatatattcaatt 6213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 24775762 - 24775881
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||||||||  ||||||||||||| | || ||||||||||||| ||||||| ||| ||| ||||||||||||  |||||||||| ||||||||    
T  24775762 tcatttcacacatatt--gaaaaatgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgtattctccactatcataaat 24775859  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | |||||  |||||||||||||    
T  24775860 gtaaagtgaaatatattgaatt 24775881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 28108326 - 28108448
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| |||| ||||||||||||  ||||| | || |||||||||||||  |||||| ||| ||| |||||||||||| ||||||||||| ||||| |    
T  28108326 ctcatttcacacgtattaagaaaaaattataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataca 28108425  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    || ||||| ||||||||||||||    
T  28108426 tgtaaagtggaatatattgaatt 28108448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 44737030 - 44736939
Alignment:
Q  56 gtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattc 149  Q
    ||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  || |||||||||| |||||    
T  44737030 gtcatttgctcatttcacacatattaagaaaaatgtataagttaatgagagataaaaatgattttaagtgctc--atcaagtattggtgcattc 44736939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 3100543 - 3100434
Alignment:
Q  77 tattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaat 176  Q
    |||||| | |||| ||||| | || ||||||||||||||||||||| || |||| |||||||||| | ||||||||||| ||||||||||||||| ||||    
T  3100543 tattaaaacaaatatataaatgaaggagagagaaaaatgattttaagtgatcttgttaagtattgctgcattctccactatcataaatgcaaagtggaat 3100444  T
Q  177 atattgaatt 186  Q
    ||||| ||||    
T  3100443 atattaaatt 3100434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 4282952 - 4283092
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa--tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||| ||||||||||||||   ||||||||||||  ||||||| |||| |||||||||||||| |||| | ||| ||||| |||||||||| |    
T  4282952 ttaactgagtcttttgctcattttacgtttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgaatgcccttatcaagtattggtgc 4283051  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||  |  | ||||||||| ||| ||||||||||||||||    
T  4283052 attcctctttatcataaatgtaaaatagaatatattgaatt 4283092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 8550582 - 8550715
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctcc 152  Q
    |||||| ||| ||||||| ||||| ||| |||||||||||||| | || ||||||||||| || |||||| || |||| | ||||||| || ||||||||    
T  8550582 tgagtcgttttctcatttcacacacatttagaaaaatgtataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattctcc 8550681  T
Q  153 actgtcataaatgcaaagtagaatatattgaatt 186  Q
    | | |||||||||||||||  |||||||||||||    
T  8550682 attatcataaatgcaaagtctaatatattgaatt 8550715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 11726666 - 11726795
Alignment:
Q  57 tcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactg 156  Q
    |||||||||||||| |||| |||||| |||||||||||  | || |||||||||||||  |||||| | || || ||| |||||  | |||||||||||     
T  11726666 tcatttgctcatttaacacgtattaacaaaaatgtatagatgaaggagagagaaaaatagttttaagtactattgttatgtattaatgcattctccacta 11726765  T
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    |||||| |||||||||||||||||||||||    
T  11726766 tcataattgcaaagtagaatatattgaatt 11726795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 37247816 - 37247957
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||| ||||||||| ||||  | ||| ||||||||| ||||||||||   || || ||| ||||||  |||||| ||||||| ||||||||||||     
T  37247816 agattaaccgagtcatttactcaaatcacatatattaagacaaatgtataaaagaaggaaagaaaaaaatagttttaagtgctcttgttaagtattggtc 37247915  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     |||||||||| |||||||||||||||  |||||||||||||    
T  37247916 tattctccactatcataaatgcaaagtgaaatatattgaatt 37247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 10069519 - 10069658
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| |||||| ||||||||||| ||||  |||||||||||| ||||| | || |||||| |||||||||||||| | || || | ||||||| || ||    
T  10069519 attaagtgagtcttttgctcatttcacactcattaagaaaaatatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgca 10069618  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||  ||| | ||||||||||||||| ||||||||||||||    
T  10069619 tttaccattatcataaatgcaaagtcgaatatattgaatt 10069658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 43950390 - 43950521
Alignment:
Q  55 agtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccac 154  Q
    |||||||| ||||||| |||| |||||| |||||||||||| | || |||||||||||||  |||||| || | || |||||||||| |  ||| ||||     
T  43950390 agtcatttactcatttcacacttattaaaaaaaatgtataagtgaaagagagagaaaaatagttttaaatgtttttgttaagtattgatgtattttccat 43950489  T
Q  155 tgtcataaatgcaaagtagaatatattgaatt 186  Q
    |  |||||||||||||||||||||||||||||    
T  43950490 taacataaatgcaaagtagaatatattgaatt 43950521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 33755431 - 33755293
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||| ||||||| ||||||||  | |||| |||||||| |||||||||| | || ||||||||||||||||||||| || | || ||||||||||||      
T  33755431 gattatctgagtcttttgctcaaatcacacgtattaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttattgttaagtattggtct 33755332  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaa 184  Q
    |||||   || ||||||||||||| | ||||||||||||    
T  33755331 attcttttctatcataaatgcaaaatggaatatattgaa 33755293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 5211910 - 5212031
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||||||||||| | |||||||||| | ||  |||| |||||||  |||||| ||||||| ||||||||| || |||| || ||| ||||||||    
T  5211910 tcatttcacacatattaaaacaaatgtataaatgaagaagagggaaaaatagttttaagtgctcttgttaagtatttgtgcattatcaactatcataaat 5212009  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||    
T  5212010 gcaaagtggaatatattgaatt 5212031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 30757520 - 30757641
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| | |||||||||||||||||||||| | || |||||||||||||  |||||| ||| ||| |||||||||  | |||| |||||| ||||||||    
T  30757520 tcatttaatacatattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattaatgcattttccactatcataaat 30757619  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | ||| | ||||||||||||||    
T  30757620 gtaaattggaatatattgaatt 30757641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 39095794 - 39095665
Alignment:
Q  57 tcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactg 156  Q
    |||||| ||||||||||| ||||| |||||||||||||| | ||  ||||| |||||| |||| || || |||    |||||||| ||||||||||| |     
T  39095794 tcattttctcattttacatatattgagaaaaatgtataaatgaagtagagaaaaaaatcatttgaagtgttctcgagaagtattgatacattctccatta 39095695  T
Q  157 tcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||| ||||||||||||||    
T  39095694 tcataaatgcaaagtggaatatattgaatt 39095665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 31545950 - 31546086
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    ||||||| ||| |||||||||||||| ||| ||||||| |||||||||||| | || ||||  ||||| || |||||| || |||| |||| ||||| |     
T  31545950 agattaagtgaatcatttgctcatttcacatatattaaaaaaaatgtataaatgaaggagaaggaaaagtggttttaagtgatcttgttaaatattgatg 31546049  T
Q  145 cattctccactgtcataaatgcaaagtagaatatatt 181  Q
    || |||||||| ||| ||||||||||| |||||||||    
T  31546050 cactctccactatcacaaatgcaaagtggaatatatt 31546086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 36396431 - 36396531
Alignment:
Q  86 aaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaat 185  Q
    |||||||||| ||||  | ||||||||||| |||||| |||||||  | |||||| || |||||||||||||||||||||||||||| |||||||| |||    
T  36396431 aaatgtataaataaagtatagagaaaaatggttttaagtgctcttgatgagtattagtgcattctccactgtcataaatgcaaagtataatatattaaat 36396530  T
Q  186 t 186  Q
    |    
T  36396531 t 36396531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 7213664 - 7213509
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctt 130  Q
    ||||| || |||| || |||| |||| ||||| ||||||| ||||| |||||||||||||||||| | ||  |||||||||||||||||| | |||  ||    
T  7213664 actccctcggtcccagtttaattgagccattttctcatttcacacagattaagaaaaatgtataaatgaaatagagagaaaaatgattttgagtgccttt 7213565  T
Q  131 attaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || || ||||||| |||||| |  | | ||||||| ||||| ||||||||||||||    
T  7213564 atcaaatattggtgcattcttctttattataaatgtaaagtggaatatattgaatt 7213509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 36155687 - 36155580
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaaga-aaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||  |||||||||  | ||||||||||||| ||||||||||| | || |||||| |||||||||||||| ||||||| ||||||||||||      
T  36155687 attaactgagctatttgctcagatcacacatattaagataaaatgtataaatgaaggagagaaaaaaatgattttaagtgctcttgttaagtattggtgt 36155588  T
Q  146 attctcca 153  Q
    ||||||||    
T  36155587 attctcca 36155580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 8031911 - 8031775
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||| |||  |||||||||||| ||||||  |||||||||| ||||| | ||  |||||||||||||||||||  || |||| |||||||||| |      
T  8031911 gattaaccgagcaatttgctcatttcacacat--taagaaaaatatataaattaa--agagagaaaaatgattttatgtgttcttgttaagtattgatgt 8031816  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| | |||||||||||||||  |||||||||||||    
T  8031815 attctccattatcataaatgcaaagttaaatatattgaatt 8031775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 10818797 - 10818655
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataatta-aatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    |||||||| |||||||||| |||||| |||| ||| |||||||||||||||    || |||||||||||||| |||||    ||||| ||||||||||||    
T  10818797 agattaaccgagtcatttgttcatttcacacgtatcaagaaaaatgtataaaacgaaggagagagaaaaatggttttatgcactcttgttaagtattggt 10818698  T
Q  144 acattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     ||||||| | | |||||||||||||||  ||| |||||||||    
T  10818697 gcattctctagtatcataaatgcaaagtgaaatgtattgaatt 10818655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 2756829 - 2756708
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| ||||||||||||||||| | | ||  |||||||||||| ||||||| ||||||| | ||||||| || ||||  ||| | ||||||||    
T  2756829 tcatttcacacttattaagaaaaatgtattaatgaagaagagagaaaaattattttaagtgctcttgtcaagtattagtgcatttaccattatcataaat 2756730  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | ||||||||||||||| ||||    
T  2756729 gtaaagtagaatatattaaatt 2756708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 36103265 - 36103374
Alignment:
Q  77 tattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaat 176  Q
    |||||||||||||||| || | || ||||||||||||||||||||| || |||| |||||||| | | ||||||||||| |||| |||  ||| | ||||    
T  36103265 tattaagaaaaatgtacaaatgaaggagagagaaaaatgattttaagtgttcttgttaagtatcgatgcattctccactatcatgaatataaaatggaat 36103364  T
Q  177 atattgaatt 186  Q
    ||||||||||    
T  36103365 atattgaatt 36103374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 18460642 - 18460522
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    ||||| ||||| |||||||||| ||||||| | || |||| |||||||||||||| | ||   || | || |||||||||||||| |  |||||||||||    
T  18460642 catttcacacagattaagaaaagtgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaatg 18460543  T
Q  166 caaagtagaatatattgaatt 186  Q
     ||||||||||||||||||||    
T  18460542 taaagtagaatatattgaatt 18460522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 20027067 - 20027223
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaat-gattttaactgctct 129  Q
    ||||| || |||||||||||| ||||| |||||||||||| | |||||||||||||| | |||||   |||||||||||||||| | |||||| || | |    
T  20027067 actccctccgtcctagattaagtgagttatttgctcatttcagacatattaagaaaagtatataagcgaatgagagagaaaaatagtttttaagtgtttt 20027166  T
Q  130 tattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | | |||||||| | ||||| ||| | |||||||| |||||| ||  ||||||||||    
T  20027167 tgtcaagtattgctgcattcaccattatcataaatacaaagtggaggatattgaatt 20027223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 314584 - 314461
Alignment:
Q  64 ctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    ||||||| |||| |||||||||||| ||||||| | || ||||||| |||||| |||| | ||| ||||| || ||||| | |||||| |  | ||||||    
T  314584 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgcattcttctttatcataa 314485  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||||||||||||    
T  314484 atgcaaagtagaatatattgaatt 314461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 6972475 - 6972613
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||||| ||  ||||||| |||| |||||||||||| ||||||| | || ||||||||||| || |||| | ||| ||||| || |||| || ||    
T  6972475 ttaactgagtctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaa-tggttttgagtgcccttatcaactatttgtgca 6972573  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |  | ||||||||||||||||||||||||||||||    
T  6972574 ttcttctttatcataaatgcaaagtagaatatattgaatt 6972613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 435026 - 435151
Alignment:
Q  63 gctcattttacacatattaagaaaaat--gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcat 160  Q
    |||||||| |||| |||||||||||||  |||||| | || |||||| ||||||  |||||| ||| ||| |||| |||| || ||||||||||| ||||    
T  435026 gctcatttcacacgtattaagaaaaatatgtataaatgaaagagagacaaaaatagttttaagtgcacttgttaaatattagtgcattctccactatcat 435125  T
Q  161 aaatgcaaagtagaatatattgaatt 186  Q
    ||||| |||||  |||||||||||||    
T  435126 aaatgtaaagtgaaatatattgaatt 435151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 26273915 - 26273793
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||| | || ||||||||||| ||||| | | ||  ||||| |||||| ||||||| ||||||| |||| ||||| ||||||   || | |||||||    
T  26273915 ctcatttcatacttattaagaaaagtgtatcaatgaagaagagataaaaataattttaattgctctttttaaatattgatacatttatcattatcataaa 26273816  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||||||    
T  26273815 tgcaaagtagaatatattgaatt 26273793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 37529006 - 37529144
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||||||||||||||| |||||| |||| |||||| |||||| ||| | |||| || ||||||||||| |||| | ||   || ||||||||||||  ||    
T  37529006 ttaactgagtcatttgttcatttcacacttattaaaaaaaatatattagtaaaggatagagaaaaatggttttgagtgtctttgttaagtattggtctat 37529105  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    | | |  | ||||||||| ||||||||||| ||||||||    
T  37529106 ttttctttatcataaatgtaaagtagaataaattgaatt 37529144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 2427475 - 2427394
Alignment:
Q  105 agagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||  ||| | ||| |||||||| ||||||  |||||| |  ||||||||||||||||||||||||||||||||    
T  2427475 agagaaaaatgggtttgaatgcccttattaattattggagcattcttctttgtcataaatgcaaagtagaatatattgaatt 2427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 13222222 - 13222102
Alignment:
Q  67 attttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatg 165  Q
    |||| |||| |||||||||||| ||||||| | || ||||||||||||||  ||| | ||| ||||| || |||||||  ||||| |  | |||||||||    
T  13222222 atttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgtattcttctttatcataaatg 13222123  T
Q  166 caaagtagaatatattgaatt 186  Q
    ||||||| |||||||||||||    
T  13222122 caaagtaaaatatattgaatt 13222102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 15859304 - 15859415
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    ||||||||||||| |||| ||||| | || |||||||||||||  |||||| | || || |||||||||||  ||||||||||    |||||||||||||    
T  15859304 acacatattaagacaaatatataaatgaaggagagagaaaaatagttttaagtacttttgttaagtattggggcattctccac---aataaatgcaaagt 15859400  T
Q  172 agaatatattgaatt 186  Q
      |||||||||||||    
T  15859401 gaaatatattgaatt 15859415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 44194842 - 44194794
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataa 95  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  44194842 attaattgagtcattttctcattttgcacatattaagaaaaatgtataa 44194794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 24589197 - 24589108
Alignment:
Q  46 gattaactgagtcatttgctcattttacac--atattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttatta 134  Q
    |||||||||||||||||| |||||| |||   |||||||||||||||||||| |||| ||||||  |||||| |||||  |||||||||||    
T  24589197 gattaactgagtcatttgttcatttcacatgtatattaagaaaaatgtataaataaaggagaga-taaaatggttttatgtgctcttatta 24589108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 39159791 - 39159653
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| || ||| ||||||||||| |||| ||||| ||||||||||  | | |  ||||||||||||||||||||| ||||||| | || | || |||||    
T  39159791 attaagtgggtcttttgctcatttcacacttatta-gaaaaatgtaatagtgatagagagagaaaaatgattttaagtgctcttgtcaaatgttagtaca 39159693  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||  ||| | || ||||||||||||| |||||| ||||||    
T  39159692 tttaccattatcttaaatgcaaagtaaaatataatgaatt 39159653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 39209403 - 39209541
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| || ||| ||||||||||| |||| ||||| ||||||||||  | | |  ||||||||||||||||||||| ||||||| | || | || |||||    
T  39209403 attaagtgggtcttttgctcatttcacacttatta-gaaaaatgtaatagtgatagagagagaaaaatgattttaagtgctcttgtcaaatgttagtaca 39209501  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||  ||| | || ||||||||||||| |||||| ||||||    
T  39209502 tttaccattatcttaaatgcaaagtaaaatataatgaatt 39209541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 38280148 - 38280258
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||||||||||||||||||||||||   ||  ||||||||||||| |||| | |||  || |||| ||||||| |||||| |  | ||||||||    
T  38280148 tcatttcacacatattaagaaaaatgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaat 38280247  T
Q  165 gcaaagtagaa 175  Q
    | |||||||||    
T  38280248 gtaaagtagaa 38280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 19516050 - 19515915
Alignment:
Q  49 taactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacatt 148  Q
    |||| |||||||||  ||||||||||  |||||| |||||||||| |   || |||||||||||||  |||||  || |||| | |||||||||| ||||    
T  19516050 taacggagtcatttattcattttacatttattaaaaaaaatgtatgaaggaaagagagagaaaaatagttttag-tg-tcttgtcaagtattggttcatt 19515953  T
Q  149 ctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
     | || | |||||||||||||||| |||||||||||||    
T  19515952 tttcattatcataaatgcaaagtaaaatatattgaatt 19515915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 40965170 - 40965093
Alignment:
Q  64 ctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattg 141  Q
    ||||||| |||| ||||||||||||||||||| | || |||||||||||||  |||||| |||  || ||||||||||    
T  40965170 ctcatttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgcatttgttaagtattg 40965093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 10394243 - 10394313
Alignment:
Q  73 cacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    |||| ||||||||||||||||||   || ||||||||||||| ||||||| || | || ||||||||||||    
T  10394243 cacacattaagaaaaatgtataaaagaaggagagagaaaaataattttaaatgtttttgttaagtattggt 10394313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 733958 - 734019
Alignment:
Q  60 tttgctcattttacacatattaaga-aaaatgtataattaaatgagagagaaaaatgatttt 120  Q
    |||| ||||||||||| ||||| || ||||||||||| | || |||||||||||||||||||    
T  733958 tttgttcattttacacgtattacgataaaatgtataaatgaaagagagagaaaaatgatttt 734019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 32556332 - 32556270
Alignment:
Q  58 catttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    |||||| |||||| |||||||||||||||| ||||||| | ||  ||||||||||||| ||||||    
T  32556332 catttgttcatttcacacatattaagaaaagtgtataagtgaa--agagagaaaaatggttttaa 32556270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 16864880 - 16864916
Alignment:
Q  59 atttgctcattttacacatattaagaaaaatgtataa 95  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  16864880 atttgttcatttaacacatattaagaaaaatgtataa 16864916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 31348629 - 31348545
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||||||||  ||| | ||| ||||| || ||||||| ||||||    | ||||||||||| ||||||||||||||||||    
T  31348629 gagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagtagaatatattgaatt 31348545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 39166685 - 39166769
Alignment:
Q  102 gagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||||||||||||| | ||| |||||||| |||  |||||||||    | ||||||||| |||||| |||||||||||||    
T  39166685 gagaaagaaaaatgattttgaatgcccttattaattatgtgtacattcttttttatcataaatgtaaagtataatatattgaatt 39166769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 41365901 - 41365820
Alignment:
Q  39 tgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    ||||| ||| ||| ||||| ||||| |||||| ||||||||||||||||   ||||| | ||||||||||||| ||| ||||||    
T  41365901 tgtccaagaataagtgagttatttgttcatttcacacatattaagaaaa--ttataagtgaatgagagagaaatatggttttaa 41365820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 98999 - 98859
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||  |||||| |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||  ||||||||||| |    
T  98999 gattaactgaaccatttgttcatttcacacatattaagaaaaatgtataaatgaatgagagagaaaaatgattttaagtgctcttgataagtattggtgc 98900  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |||||  | ||||||  ||||| ||||||||||||||    
T  98899 attatccaccataataaatataaagtggaatatattgaatt 98859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 31265932 - 31265813
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgc 166  Q
    |||| ||||||||||||| |||||||||| | || |||||||||||||  |||||| ||||||| |||||||||||| ||||||||||| |||||||||     
T  31265932 atttcacacatattaagacaaatgtataaatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgcattctccactatcataaatgt 31265833  T
Q  167 aaagtagaatatattgaatt 186  Q
    ||||| ||||||||||||||    
T  31265832 aaagtggaatatattgaatt 31265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 3604552 - 3604673
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||||||||||||| |||||||||| |||| |||||||||||||| |||||| | ||||| |||||||||||| ||||||||| | |  |||||    
T  3604552 tcatttcacacatattaagacaaatgtataaataaaagagagagaaaaatggttttaagttctcttgttaagtattggtgcattctccattattgtaaat 3604651  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||||| ||||||||||||||    
T  3604652 gcaaagtggaatatattgaatt 3604673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 34915729 - 34915886
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataa--ttaaatgagagagaaaaatgattttaactgctc 128  Q
    |||||||||||  | |||||||| |||||||||||||||| ||| ||||||||||||||||||||    ||  |||||||| |||||||||||| || |     
T  34915729 actccatctgtgttggattaactaagtcatttgctcatttcacatatattaagaaaaatgtataaacgaaagagagagagagaaatgattttaagtgttt 34915828  T
Q  129 ttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
       |||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||    
T  34915829 acgttaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaatt 34915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 15081580 - 15081457
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataa 162  Q
    |||||||| |||| ||||||||||||||||||| | || | |||||||||||  |||||| ||| ||| ||||||||| || ||||||||||| ||||||    
T  15081580 gctcatttcacacgtattaagaaaaatgtataaatgaaggtgagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactatcataa 15081481  T
Q  163 atgcaaagtagaatatattgaatt 186  Q
    | | ||||| ||||||||||||||    
T  15081480 acgtaaagtggaatatattgaatt 15081457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 9755099 - 9755220
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| |||| ||||||||||||| ||||| | ||  ||||||||||||  |||||| | | | | |||||||||||||||||||||||| ||||||||    
T  9755099 tcatttcacacgtattaagaaaaatatataaatgaagaagagagaaaaatagttttaagttcacgtgttaagtattggtacattctccactatcataaat 9755198  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | | ||||||||||||||||||    
T  9755199 gtagagtagaatatattgaatt 9755220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 33921404 - 33921542
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    ||||||||| |||||||||||||  ||| ||||||||||||| ||| | | || |||||||||||||| |||| | ||   || |||||||||||| |||    
T  33921404 ttaactgagccatttgctcatttcgcacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgtgtttgttaagtattggtccat 33921503  T
Q  148 tctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||| |  | ||||||||| ||||||||||||||||||||    
T  33921504 tcttctttatcataaatgtaaagtagaatatattgaatt 33921542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 4238592 - 4238455
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    |||| |||||||||||  |||||| |||||||| |||| |||||||||| | ||  ||||||||| ||  |||||| ||||||| |||||||||||| ||    
T  4238592 attagctgagtcattttttcatttcacacatatcaagataaatgtataaatgaa--agagagaaatatagttttaagtgctcttgttaagtattggtgca 4238495  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |||| ||||||||| |||||  ||| |||||||||    
T  4238494 ttcttcactatcataaatgtaaagtgaaatctattgaatt 4238455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 33109547 - 33109407
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    ||||||||||||||   |||||||| |||| ||||||||||||||||||  | ||||||||||||||||  |||||| ||| ||| |||| |||| || |    
T  33109547 gattaactgagtcaaaagctcatttcacacgtattaagaaaaatgtatagatgaatgagagagaaaaatagttttaaatgcacttgttaaatatttgtgc 33109448  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| || | |||| ||| |  |||||||||||||    
T  33109447 attctccactatcgttaatgtaaaatgaaatatattgaatt 33109407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 30063911 - 30064022
Alignment:
Q  75 catattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtaga 174  Q
    ||||||||| ||||||||||| | || |||| |||||||   |||||| |||| |||||||||||| ||  |||||||||| | ||||||||||||| ||    
T  30063911 catattaaggaaaatgtataaatgaaggagaaagaaaaaaagttttaagtgcttttattaagtatttgtgtattctccactattataaatgcaaagtgga 30064010  T
Q  175 atatattgaatt 186  Q
    ||||||||||||    
T  30064011 atatattgaatt 30064022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 7301036 - 7301153
Alignment:
Q  67 attttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgc 166  Q
    |||| |||| ||||||||||||||||||| |||||||||  |||||||  |||||| ||   || ||||||||| || ||||||||| | |||||||||     
T  7301036 atttcacacgtattaagaaaaatgtataaataaatgaga--gaaaaatagttttaagtgtgtttgttaagtatttgtgcattctccattatcataaatgt 7301133  T
Q  167 aaagtagaatatattgaatt 186  Q
    ||||| ||||||||||||||    
T  7301134 aaagtggaatatattgaatt 7301153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 7739445 - 7739591
Alignment:
Q  40 gtcctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtat 139  Q
    ||||| |||||| ||| |||||||||||||| |||  || |||||||||||||||| | || |||| ||||||||  ||| || || | || ||||||||    
T  7739445 gtcctcgattaaatgaatcatttgctcatttcacatgtaataagaaaaatgtataagtgaaagagatagaaaaatagtttaaaatgtttttgttaagtat 7739544  T
Q  140 tggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    || | ||||| ||| | | ||||||| ||||||||| ||||||||||    
T  7739545 tgatgcattcaccattattataaatgtaaagtagaagatattgaatt 7739591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 14312580 - 14312721
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||| |||||||||| |||| | |  |||||| ||||||| |||| | || || | ||||||||| |||||| || | || ||||||||||||     
T  14312580 agattaactgtgtcatttgcttatttcataagtattaataaaaatgcataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtg 14312679  T
Q  145 cattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    ||||||||| | ||||||||| |||||  ||| |||||||||    
T  14312680 cattctccattatcataaatgtaaagtgaaatgtattgaatt 14312721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 9354375 - 9354506
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacat 147  Q
    |||||||||||||||||| ||||||||  | ||||||||||| ||| | | ||||||||||||||||| |||| | ||   || |||| ||||||| |||    
T  9354375 ttaactgagtcatttgcttattttacattttttaagaaaaatatattagtgaatgagagagaaaaatggttttgagtgtctttgttaaatattggtccat 9354474  T
Q  148 tctccactgtcataaatgcaaagtagaatata 179  Q
    ||| |  | ||||||||| | |||||||||||    
T  9354475 tcttctttatcataaatgtagagtagaatata 9354506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 15371798 - 15371936
Alignment:
Q  48 ttaactgagtcatttgctcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||||||| | || | |||||| |||  |||||||||||| ||||||| | || | |||||||||||| |||| | || |||||| || |||| || ||    
T  15371798 ttaactgagcccttggttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtg-tcttatcaactattagtgca 15371896  T
Q  147 ttctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| |  | ||||||||||||||||||||||||||||||    
T  15371897 ttcttctttatcataaatgcaaagtagaatatattgaatt 15371936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 8569575 - 8569695
Alignment:
Q  47 attaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtaca 146  Q
    ||||| ||||| | ||| |||||| |||| |||||| |||||||||||| | ||||||| |||||||||||||||| ||   || ||  ||||||||  |    
T  8569575 attaagtgagttaattgttcatttcacacgtattaa-aaaaatgtataagtgaatgagaaagaaaaatgattttaagtg---tttttgtgtattggtgta 8569670  T
Q  147 ttctccactgtcataaatgcaaagt 171  Q
    ||| ||||| |||||||||||||||    
T  8569671 ttcaccactatcataaatgcaaagt 8569695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 14306173 - 14306299
Alignment:
Q  45 agattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||||||| |||||||||| |||| | |  |||||| ||||| | |||| | || || | ||||||||| |||||| || | || ||||||||||||     
T  14306173 agattaactgtgtcatttgcttatttcataagtattaaaaaaaaagcataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtg 14306272  T
Q  145 cattctccactgtcataaatgcaaagt 171  Q
    ||||||||| | ||||||||| |||||    
T  14306273 cattctccattatcataaatgtaaagt 14306299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 15321189 - 15321298
Alignment:
Q  77 tattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaa 175  Q
    |||||||||||| ||||||| | || ||||||||||| || |||| | || |||||| || ||||||| | |||| |  | |||||||||||||||||||    
T  15321189 tattaagaaaaagtgtataactgaaagagagagaaaattggttttcagtg-tcttataaactattggtgcgttcttctttatcataaatgcaaagtagaa 15321287  T
Q  176 tatattgaatt 186  Q
    |||||||||||    
T  15321288 tatattgaatt 15321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 28539131 - 28539030
Alignment:
Q  84 aaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattga 183  Q
    |||||||||||||| || |||| |||||||| ||||| | || |||||||||||||| || || ||| |  | | ||||||||||||||||||||||| |    
T  28539131 aaaaatgtataattgaaagagaaagaaaaataattttgaatg-tcttattaagtattagtgcaatcttccttattataaatgcaaagtagaatatattaa 28539033  T
Q  184 att 186  Q
    |||    
T  28539032 att 28539030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 15355730 - 15355609
Alignment:
Q  65 tcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||||||  |||||||||||| ||||||| | ||  |||||||||| || |||| | || |||||| || ||||||| |||||| |  | |||||||    
T  15355730 tcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtg-tcttatcaactattggtgcattcttctttatcataaa 15355632  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    | |||||||||||||| ||||||    
T  15355631 tccaaagtagaatataatgaatt 15355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 178949 - 178991
Alignment:
Q  78 attaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||    
T  178949 attaagaaaaatgtataaataaa--agagagaaaaatgattttaa 178991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 117193 - 117113
Alignment:
Q  106 gagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| ||||||   ||||| ||||  |||||| |||||||||   |||||||| |||||| ||||||||||||||    
T  117193 gagaaaaatggttttaaggactcttgttaaaaattggtgcattctccatgatcataaatacaaagtggaatatattgaatt 117113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 2658060 - 2657978
Alignment:
Q  64 ctcattttacacatattaagaaaaatgta---taattaaatgagagagaaaaatgattttaactgctcttattaagtattggt 143  Q
    ||||||| |||||| |||| |||||||||   ||| | ||| |||||||||||||||||||| | || || ||||||||||||    
T  2658060 ctcatttcacacattttaataaaaatgtactataaatgaataagagagaaaaatgattttaagtacttttgttaagtattggt 2657978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 25399142 - 25399082
Alignment:
Q  53 tgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaa 113  Q
    ||||||||||| |||| | ||||||||||| |||||||||||| | || |||| |||||||    
T  25399142 tgagtcatttgatcatgtcacacatattaaaaaaaatgtataagtgaaagagaaagaaaaa 25399082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 33017965 - 33018017
Alignment:
Q  134 aagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| |||||| |  | ||||||||| ||||||||||||||||||||    
T  33017965 aagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 33018017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 229970 - 229857
Alignment:
Q  72 acacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagt 171  Q
    |||| |||||||| |||||||||| | || |||| ||||||||| |||||| ||||||| |||||||||||| ||||||||| | |||||||||||||||    
T  229970 acacgtattaagacaaatgtataaatgaaggagatagaaaaatg-ttttaagtgctcttgttaagtattggtgcattctccattatcataaatgcaaagt 229872  T
Q  172 agaatatattgaatt 186  Q
     | ||||||||||||    
T  229871 ggtatatattgaatt 229857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 14630 - 14490
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtac 145  Q
    |||||||||| |||   ||| |||| |||| ||||||||||||||||||| | || | |||| ||||||  |||||| ||| |||  ||||||||| | |    
T  14630 gattaactgaatcaaaagcttatttcacacgtattaagaaaaatgtataaatgaaggggagataaaaatagttttaattgcacttgctaagtattgatgc 14531  T
Q  146 attctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  14530 attctccactgtcataaatgtaaagtggaatatattgaatt 14490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 178
Target Start/End: Original strand, 9486 - 9617
Alignment:
Q  46 gattaactgagtcatttgctcattttacacatattaagaaaaat-gtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggta 144  Q
    |||||| |||| |||| ||||||||  ||||||||||||||||  |||||| | || |||||||||||||| |||||| ||||||| |||||||||  |     
T  9486 gattaagtgagccattcgctcattt--cacatattaagaaaaaaagtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattaatg 9583  T
Q  145 cattctccactgtcataaatgcaaagtagaatat 178  Q
     |||||||| | ||||||||||||||| ||||||    
T  9584 tattctccattatcataaatgcaaagtggaatat 9617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 10707 - 10864
Alignment:
Q  31 actccatctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaa--tgtataattaaatgagagagaaaaatgattttaactgctc 128  Q
    |||||||| |||| |  |||||||||||||| |||||||| |||  ||||||||||||  ||| ||| | || ||||||||||||||  ||| | ||  |    
T  10707 actccatccgtcccattttaactgagtcattggctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtcc 10806  T
Q  129 ttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||| || ||||||| |||||| |  | |||||||||||||||| |||||||||||||    
T  10807 ttatcaactattggttcattcttctttatcataaatgcaaagtaaaatatattgaatt 10864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 8971 - 8921
Alignment:
Q  136 gtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||| ||||||||||| | ||||||||||||| ||||||||||||||    
T  8971 gtattggtgcattctccactattataaatgcaaagtggaatatattgaatt 8921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 186
Target Start/End: Complemental strand, 26752 - 26647
Alignment:
Q  74 acatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtag 173  Q
    ||||||||||| |||||||||| | || |||||||||||||| |       |||||  ||||||||||||  |||||||||| ||||||||||||||| |    
T  26752 acatattaagacaaatgtataaatgaaggagagagaaaaatggt-------gctctggttaagtattggtctattctccactatcataaatgcaaagtgg 26660  T
Q  174 aatatattgaatt 186  Q
    |||||||||||||    
T  26659 aatatattgaatt 26647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 352415 - 352534
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||||| |||||||||| ||||||| ||||  |||||||||||| ||||| | ||   || |||||||||||| |||||| |  | ||||||||    
T  352415 tcatttcacacagattaagaaaagtgtataaataaa--agagagaaaaataattttgagtgtctttgttaagtattggtgcattcttctttatcataaat 352512  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | ||||||||||||||||||||    
T  352513 gtaaagtagaatatattgaatt 352534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 5986 - 5852
Alignment:
Q  50 aactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattc 149  Q
    ||||||||||||| || |||| ||||| |||||||||| ||||||| ||||  ||||||||||||||| || | ||   |||| |||||||| | ||||     
T  5986 aactgagtcattttcttatttcacacaaattaagaaaagtgtataaataaa--agagagaaaaatgatcttgagtgtctttatcaagtattgatgcattg 5889  T
Q  150 tccactgtcataaatgcaaagtagaatatattgaatt 186  Q
      |  | ||||||||| ||||||||||||||||||||    
T  5888 ctctttatcataaatgtaaagtagaatatattgaatt 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 9023 - 8964
Alignment:
Q  63 gctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaa 122  Q
    |||||||| |||||||||||||||||||||||| | ||  |||||||||||| |||||||    
T  9023 gctcatttcacacatattaagaaaaatgtataaatgaagaagagagaaaaataattttaa 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 230410 - 230290
Alignment:
Q  65 tcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaat 164  Q
    |||||| ||| ||||||||| || ||||||| | ||  ||||||||||||| |||||| |  |||| ||||| || |||||||||||   | ||||||||    
T  230410 tcatttcacatatattaagacaa-tgtataaatgaagaagagagaaaaatggttttaagtattcttgttaagcatgggtacattctctgttatcataaat 230312  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    ||||| | ||||||||||||||    
T  230311 gcaaaatggaatatattgaatt 230290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 720 - 599
Alignment:
Q  65 tcattttacacatattaagaaaaa-tgtataattaaatgagagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaa 163  Q
    ||||||||||  |||||||||||| ||||||| | ||  |||||||||| || |||| | || |||||| || ||||||| |||||| |  | |||||||    
T  720 tcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtg-tcttatcaactattggtgcattcttctttatcataaa 622  T
Q  164 tgcaaagtagaatatattgaatt 186  Q
    | |||||||||||||| ||||||    
T  621 tccaaagtagaatataatgaatt 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 171342 - 171260
Alignment:
Q  104 gagagaaaaatgattttaactgctcttattaagtattggtacattctccactgtcataaatgcaaagtagaatatattgaatt 186  Q
    |||||||||| | |||||| || |||| | |||||||||| | ||  ||| | ||||||||| ||||||||||||||||||||    
T  171342 gagagaaaaaaggttttaaatgttcttgtcaagtattggtgcgtttaccattatcataaatgtaaagtagaatatattgaatt 171260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 6353 - 6473
Alignment:
Q  66 cattttacacatattaagaaaaatgtataattaaatgagagagaaaaatgattttaactgctctta-ttaagtattggtacattctccactgtcataaat 164  Q
    ||||| ||||| ||||||||||||||||||   || |||||||| | |||||||| | || ||||| | |||||||| | |||||| |  | ||||||||    
T  6353 catttcacacagattaagaaaaatgtataaaggaaagagagagagagatgattttgagtg-tcttagtcaagtattgatgcattcttctttatcataaat 6451  T
Q  165 gcaaagtagaatatattgaatt 186  Q
    | |||||| |||||||||||||    
T  6452 gtaaagtaaaatatattgaatt 6473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 394950 - 394878
Alignment:
Q  43 ctagattaactgagtcatttgctcattttacacatattaagaaaaatgtataattaaatgagagagaaaaatg 115  Q
    ||||||||||||||||||||| | |  | ||| ||||||||| |||||||||| |||| |||  |||||||||    
T  394950 ctagattaactgagtcatttgtttaaatcacatatattaagataaatgtataaataaaggagttagaaaaatg 394878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 2175 times since January 2019
Visitors: 8437