View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1631-INSERTION-10 (Length: 417)
Name: NF1631-INSERTION-10
Description: NF1631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1631-INSERTION-10 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 9 - 393
Target Start/End: Original strand, 38937946 - 38938329
Alignment:
| Q |
9 |
ggacaagttaggatgatagtgttccttttagtccacagttggtgaggttgagatattcaagcattcctaaattaccataaaggaattctggtatggtacc |
108 |
Q |
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| T |
38937946 |
ggacaagtt-ggatgatagtgttccttctagtccacagttggtgaggttgagatattcaagcattcctaaattaccataaaggaattctggtatggtacc |
38938044 |
T |
|
| Q |
109 |
attccaactgttctcagagaggtcaagatatgttaaattcttgcactcatgtatgaaacttggaatgtcaccagtgaattcattttcctccaaaccaagg |
208 |
Q |
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| T |
38938045 |
attccaactgttctcagagaggtcaagatatgttaaattcttgcactcatgtatgaaacttggaatgtcaccagtgaattcattttcctccaaaccaagg |
38938144 |
T |
|
| Q |
209 |
taatttaatgaaagcatgtttgaatattgagaccaatcaacggaagatacaaaaaagtttgatccaagatcaaggtaacttaccttggagagattagtga |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38938145 |
taatttaatgaaagcatgtttgaatattgagaccaatcaacggaagatacaaaaaagtttgatccaagatcaaggtaacttaccttggagagattagtga |
38938244 |
T |
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| Q |
309 |
gctgatagggaatggtaccattgagattattgaagtaaaaactaacatattgaagttcttttagatggcctagctcggatggtag |
393 |
Q |
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| T |
38938245 |
gctgatagggaatggtaccattgagattattgaagtaaaaactaacatattgaagttcctttagatggcctagctcggatggtag |
38938329 |
T |
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