View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1631-INSERTION-7 (Length: 351)

Name: NF1631-INSERTION-7
Description: NF1631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1631-INSERTION-7
NF1631-INSERTION-7
[»] chr8 (48 HSPs)
chr8 (114-256)||(22781890-22782032)
chr8 (126-256)||(2339298-2339428)
chr8 (130-256)||(33642466-33642592)
chr8 (113-256)||(29563666-29563809)
chr8 (113-256)||(34028391-34028534)
chr8 (126-265)||(41569106-41569245)
chr8 (113-256)||(2229067-2229210)
chr8 (126-253)||(25847978-25848105)
chr8 (126-257)||(27793204-27793335)
chr8 (126-249)||(42189818-42189941)
chr8 (113-236)||(43135072-43135195)
chr8 (114-236)||(8242251-8242373)
chr8 (126-256)||(37564641-37564771)
chr8 (115-236)||(30923920-30924041)
chr8 (127-236)||(40465249-40465358)
chr8 (126-266)||(11293197-11293337)
chr8 (127-256)||(43295074-43295202)
chr8 (126-253)||(32159044-32159171)
chr8 (130-256)||(12270070-12270196)
chr8 (126-256)||(41915602-41915732)
chr8 (114-250)||(25878170-25878305)
chr8 (126-253)||(34157671-34157799)
chr8 (126-253)||(7668202-7668329)
chr8 (113-258)||(3799713-3799859)
chr8 (127-229)||(40834171-40834273)
chr8 (126-256)||(45145877-45146003)
chr8 (112-256)||(42351194-42351338)
chr8 (126-256)||(33837588-33837719)
chr8 (115-254)||(29916537-29916676)
chr8 (115-216)||(16928840-16928941)
chr8 (126-256)||(36366033-36366162)
chr8 (115-171)||(10839762-10839818)
chr8 (113-236)||(35011209-35011331)
chr8 (201-258)||(32159040-32159097)
chr8 (127-171)||(8453687-8453731)
chr8 (199-234)||(6197905-6197940)
chr8 (200-267)||(6354731-6354798)
chr8 (201-256)||(41915679-41915734)
chr8 (126-256)||(35149676-35149806)
chr8 (202-256)||(45145951-45146005)
chr8 (201-258)||(11293193-11293250)
chr8 (199-256)||(25848050-25848107)
chr8 (196-256)||(7693113-7693173)
chr8 (201-265)||(24915254-24915318)
chr8 (201-265)||(29563743-29563807)
chr8 (201-265)||(30923920-30923984)
chr8 (201-253)||(40465249-40465301)
chr8 (201-265)||(43135129-43135193)
[»] chr1 (42 HSPs)
chr1 (126-265)||(28359081-28359220)
chr1 (126-256)||(2352317-2352447)
chr1 (126-256)||(14281598-14281728)
chr1 (126-255)||(2961114-2961243)
chr1 (130-267)||(28989269-28989406)
chr1 (115-255)||(10380389-10380529)
chr1 (126-253)||(10065265-10065392)
chr1 (114-265)||(29312438-29312589)
chr1 (130-256)||(45536177-45536303)
chr1 (126-265)||(9548671-9548810)
chr1 (126-256)||(9301929-9302059)
chr1 (126-256)||(38830491-38830621)
chr1 (115-236)||(26545025-26545146)
chr1 (129-253)||(24594932-24595055)
chr1 (126-249)||(6784674-6784797)
chr1 (146-256)||(23398088-23398198)
chr1 (114-236)||(26550285-26550407)
chr1 (126-250)||(33325347-33325471)
chr1 (126-253)||(1673982-1674109)
chr1 (130-250)||(40161187-40161307)
chr1 (126-256)||(26733793-26733923)
chr1 (127-265)||(30264785-30264923)
chr1 (126-265)||(7796100-7796239)
chr1 (130-229)||(15289808-15289907)
chr1 (167-256)||(34718899-34718988)
chr1 (176-253)||(23537381-23537458)
chr1 (130-253)||(46320171-46320286)
chr1 (142-229)||(24463324-24463411)
chr1 (126-276)||(43929334-43929483)
chr1 (126-256)||(49944843-49944973)
chr1 (113-171)||(50155391-50155449)
chr1 (201-265)||(10380389-10380453)
chr1 (115-171)||(29256691-29256747)
chr1 (199-258)||(1673978-1674037)
chr1 (201-256)||(9301927-9301982)
chr1 (201-256)||(33325418-33325473)
chr1 (115-258)||(38040282-38040425)
chr1 (130-256)||(44939074-44939200)
chr1 (201-265)||(25021316-25021380)
chr1 (201-257)||(27422992-27423048)
chr1 (133-256)||(29892149-29892270)
chr1 (127-171)||(34146897-34146941)
[»] chr6 (28 HSPs)
chr6 (126-256)||(390815-390945)
chr6 (114-256)||(766425-766567)
chr6 (113-258)||(7405450-7405595)
chr6 (126-253)||(885612-885739)
chr6 (113-256)||(24949628-24949771)
chr6 (113-256)||(31971027-31971170)
chr6 (129-265)||(6801564-6801700)
chr6 (126-256)||(6047806-6047936)
chr6 (113-258)||(33859496-33859641)
chr6 (142-253)||(17225269-17225380)
chr6 (115-258)||(34639039-34639182)
chr6 (126-256)||(6045691-6045821)
chr6 (114-272)||(8558912-8559069)
chr6 (129-254)||(30686554-30686679)
chr6 (127-251)||(13144220-13144344)
chr6 (146-256)||(14931266-14931371)
chr6 (169-256)||(22898861-22898948)
chr6 (151-229)||(36351-36429)
chr6 (170-256)||(22880926-22881012)
chr6 (196-254)||(1158325-1158383)
chr6 (126-256)||(2810089-2810218)
chr6 (114-258)||(5483867-5484011)
chr6 (126-254)||(28630763-28630891)
chr6 (201-256)||(24949639-24949694)
chr6 (126-231)||(1158278-1158383)
chr6 (201-254)||(8558924-8558977)
chr6 (133-206)||(28863337-28863410)
chr6 (196-256)||(2943322-2943382)
[»] scaffold0002 (1 HSPs)
scaffold0002 (126-254)||(492315-492443)
[»] chr2 (52 HSPs)
chr2 (126-254)||(42263480-42263608)
chr2 (113-256)||(29866090-29866233)
chr2 (113-256)||(13775719-13775862)
chr2 (129-265)||(32880906-32881042)
chr2 (130-254)||(43657939-43658063)
chr2 (126-253)||(32197387-32197514)
chr2 (126-256)||(16241277-16241407)
chr2 (114-256)||(41260033-41260175)
chr2 (115-256)||(20427009-20427150)
chr2 (127-256)||(25891955-25892084)
chr2 (127-256)||(40430677-40430806)
chr2 (126-256)||(6761473-6761603)
chr2 (113-255)||(7765791-7765933)
chr2 (127-256)||(2100025-2100154)
chr2 (130-251)||(11363012-11363133)
chr2 (125-251)||(45065589-45065715)
chr2 (112-233)||(32750338-32750459)
chr2 (114-250)||(1944532-1944668)
chr2 (113-236)||(42341646-42341769)
chr2 (113-256)||(44737280-44737422)
chr2 (146-256)||(11711354-11711464)
chr2 (129-251)||(3264935-3265053)
chr2 (115-256)||(38598464-38598605)
chr2 (126-254)||(18452579-18452706)
chr2 (130-256)||(4740718-4740844)
chr2 (130-255)||(41205504-41205629)
chr2 (158-250)||(30864717-30864809)
chr2 (127-227)||(33913188-33913288)
chr2 (129-193)||(20360515-20360579)
chr2 (196-265)||(39377911-39377980)
chr2 (196-256)||(39377844-39377904)
chr2 (127-187)||(42470922-42470982)
chr2 (146-229)||(22857834-22857917)
chr2 (151-265)||(3037758-3037874)
chr2 (126-219)||(20555268-20555361)
chr2 (150-255)||(44736813-44736918)
chr2 (120-256)||(38983007-38983143)
chr2 (113-256)||(4063269-4063411)
chr2 (196-255)||(12486072-12486131)
chr2 (146-256)||(9152387-9152497)
chr2 (115-165)||(34447602-34447652)
chr2 (110-256)||(45034392-45034537)
chr2 (151-246)||(22857822-22857917)
chr2 (196-231)||(27596729-27596764)
chr2 (196-250)||(27182089-27182143)
chr2 (196-250)||(27831631-27831685)
chr2 (196-266)||(38598536-38598606)
chr2 (113-171)||(41205583-41205641)
chr2 (118-171)||(28249026-28249079)
chr2 (201-265)||(11711323-11711387)
chr2 (127-171)||(41153204-41153248)
chr2 (201-265)||(42341703-42341767)
[»] scaffold0123 (1 HSPs)
scaffold0123 (126-256)||(29252-29382)
[»] chr4 (64 HSPs)
chr4 (111-256)||(36099495-36099640)
chr4 (126-265)||(31227270-31227409)
chr4 (113-256)||(23125654-23125797)
chr4 (126-256)||(5970289-5970419)
chr4 (126-256)||(31854389-31854519)
chr4 (130-256)||(38687925-38688051)
chr4 (126-254)||(19485582-19485710)
chr4 (127-254)||(47948949-47949076)
chr4 (126-256)||(39877411-39877541)
chr4 (113-258)||(18430250-18430397)
chr4 (8-116)||(22453534-22453642)
chr4 (113-253)||(55292109-55292249)
chr4 (128-255)||(2279533-2279660)
chr4 (113-256)||(4758774-4758917)
chr4 (126-256)||(35328947-35329077)
chr4 (126-255)||(2385205-2385334)
chr4 (126-256)||(53621338-53621468)
chr4 (115-256)||(18135310-18135453)
chr4 (132-254)||(2411856-2411978)
chr4 (126-256)||(6246616-6246746)
chr4 (127-256)||(580422-580551)
chr4 (130-251)||(56216247-56216368)
chr4 (126-254)||(21221128-21221255)
chr4 (130-250)||(38046624-38046744)
chr4 (129-256)||(44199985-44200112)
chr4 (130-256)||(52535965-52536091)
chr4 (264-350)||(22453447-22453535)
chr4 (113-225)||(20688455-20688567)
chr4 (134-250)||(21229239-21229355)
chr4 (129-256)||(49122534-49122660)
chr4 (153-265)||(51833011-51833123)
chr4 (129-265)||(53303735-53303871)
chr4 (152-255)||(7350242-7350345)
chr4 (146-256)||(39834282-39834392)
chr4 (126-256)||(3085883-3086012)
chr4 (126-236)||(32517780-32517892)
chr4 (113-250)||(15170880-15171017)
chr4 (126-217)||(29833275-29833366)
chr4 (146-253)||(4698634-4698741)
chr4 (183-254)||(27006515-27006586)
chr4 (113-253)||(4698620-4698760)
chr4 (113-171)||(7350184-7350242)
chr4 (130-236)||(54612002-54612098)
chr4 (113-256)||(30191893-30192036)
chr4 (202-260)||(2643612-2643670)
chr4 (158-256)||(43413584-43413681)
chr4 (201-258)||(31227356-31227413)
chr4 (8-69)||(51194674-51194735)
chr4 (126-255)||(55190676-55190804)
chr4 (196-256)||(6246688-6246748)
chr4 (127-171)||(21554201-21554245)
chr4 (196-256)||(53225724-53225784)
chr4 (196-271)||(14785009-14785084)
chr4 (126-236)||(3043802-3043911)
chr4 (126-236)||(20745360-20745469)
chr4 (150-248)||(31240876-31240974)
chr4 (199-256)||(29833273-29833330)
chr4 (209-254)||(29834554-29834598)
chr4 (126-171)||(45828508-45828553)
chr4 (113-254)||(48361049-48361190)
chr4 (126-171)||(53225737-53225782)
chr4 (115-171)||(16412233-16412289)
chr4 (201-265)||(31854378-31854442)
chr4 (199-231)||(55466115-55466147)
[»] chr5 (44 HSPs)
chr5 (125-265)||(41989563-41989703)
chr5 (113-256)||(13144888-13145031)
chr5 (126-256)||(31802968-31803098)
chr5 (113-253)||(18353205-18353345)
chr5 (113-258)||(36418982-36419127)
chr5 (126-275)||(37699790-37699939)
chr5 (114-265)||(20578653-20578804)
chr5 (113-256)||(25027702-25027845)
chr5 (126-256)||(7749926-7750056)
chr5 (130-256)||(41046836-41046962)
chr5 (127-256)||(21610312-21610441)
chr5 (129-265)||(15569344-15569480)
chr5 (127-254)||(6338326-6338453)
chr5 (126-256)||(903976-904106)
chr5 (126-256)||(1108291-1108421)
chr5 (126-256)||(9601603-9601733)
chr5 (113-255)||(36417044-36417186)
chr5 (113-254)||(26898201-26898342)
chr5 (127-277)||(16089097-16089249)
chr5 (113-253)||(29374181-29374321)
chr5 (151-256)||(7945845-7945950)
chr5 (113-233)||(23411196-23411316)
chr5 (126-265)||(2959249-2959388)
chr5 (126-265)||(2967718-2967857)
chr5 (113-256)||(7053656-7053798)
chr5 (126-253)||(41815196-41815323)
chr5 (113-256)||(1643352-1643495)
chr5 (127-229)||(2825895-2825997)
chr5 (126-253)||(42311820-42311947)
chr5 (126-236)||(21090386-21090496)
chr5 (142-250)||(6910726-6910834)
chr5 (151-255)||(14338824-14338928)
chr5 (149-265)||(38393788-38393904)
chr5 (126-255)||(15968321-15968449)
chr5 (130-256)||(1138226-1138351)
chr5 (126-256)||(22731267-22731396)
chr5 (126-256)||(27488357-27488486)
chr5 (199-256)||(42311818-42311875)
chr5 (201-256)||(21090384-21090439)
chr5 (200-229)||(7272241-7272270)
chr5 (201-258)||(7750003-7750060)
chr5 (201-253)||(2825945-2825997)
chr5 (126-166)||(29299367-29299407)
chr5 (127-171)||(38394439-38394483)
[»] chr3 (61 HSPs)
chr3 (126-256)||(14768106-14768236)
chr3 (114-256)||(18765256-18765398)
chr3 (127-256)||(335386-335515)
chr3 (113-256)||(42605824-42605967)
chr3 (126-256)||(9465081-9465211)
chr3 (126-256)||(19202260-19202390)
chr3 (126-256)||(25846521-25846651)
chr3 (126-236)||(40464550-40464660)
chr3 (126-256)||(49122952-49123082)
chr3 (115-256)||(25113348-25113489)
chr3 (126-254)||(21653354-21653482)
chr3 (113-256)||(26999029-26999172)
chr3 (126-256)||(6086911-6087041)
chr3 (126-271)||(9440138-9440283)
chr3 (137-254)||(52114045-52114162)
chr3 (130-253)||(23825160-23825283)
chr3 (125-256)||(29019743-29019874)
chr3 (126-253)||(47449927-47450054)
chr3 (126-256)||(10049676-10049806)
chr3 (127-265)||(9190027-9190165)
chr3 (126-258)||(28564945-28565077)
chr3 (113-253)||(51698111-51698251)
chr3 (113-256)||(8243679-8243822)
chr3 (126-256)||(28945664-28945794)
chr3 (126-256)||(40214910-40215040)
chr3 (126-256)||(379078-379211)
chr3 (126-256)||(42225572-42225702)
chr3 (115-256)||(13826120-13826261)
chr3 (126-234)||(1122305-1122413)
chr3 (130-251)||(44593215-44593336)
chr3 (115-265)||(22003794-22003945)
chr3 (115-265)||(22011311-22011462)
chr3 (151-233)||(8825762-8825844)
chr3 (172-265)||(40141930-40142023)
chr3 (126-253)||(39341382-39341512)
chr3 (126-208)||(26123046-26123128)
chr3 (132-254)||(3484342-3484460)
chr3 (152-217)||(42841635-42841700)
chr3 (151-236)||(55139201-55139286)
chr3 (170-235)||(16660334-16660401)
chr3 (149-231)||(8987762-8987844)
chr3 (149-267)||(22003829-22003947)
chr3 (149-267)||(22011346-22011464)
chr3 (126-256)||(28406475-28406605)
chr3 (151-256)||(48593177-48593282)
chr3 (113-265)||(8243681-8243833)
chr3 (8-80)||(25376318-25376390)
chr3 (127-258)||(54537454-54537585)
chr3 (8-65)||(54392226-54392283)
chr3 (199-247)||(19880869-19880917)
chr3 (127-171)||(43448969-43449013)
chr3 (127-171)||(51723389-51723433)
chr3 (201-256)||(10049753-10049808)
chr3 (113-171)||(21662883-21662941)
chr3 (202-256)||(28406553-28406607)
chr3 (126-256)||(53441915-53442045)
chr3 (201-258)||(1122360-1122417)
chr3 (201-254)||(29019820-29019873)
chr3 (129-254)||(29457850-29457974)
chr3 (7-51)||(26250524-26250568)
chr3 (129-213)||(49885392-49885475)
[»] chr7 (41 HSPs)
chr7 (126-272)||(5347733-5347878)
chr7 (126-256)||(23248678-23248808)
chr7 (113-258)||(12763235-12763380)
chr7 (127-274)||(3411322-3411469)
chr7 (113-256)||(30866253-30866396)
chr7 (126-236)||(29770350-29770460)
chr7 (115-256)||(7463457-7463599)
chr7 (129-250)||(32050093-32050214)
chr7 (114-249)||(19979491-19979627)
chr7 (126-250)||(34281679-34281803)
chr7 (126-265)||(5909481-5909620)
chr7 (130-265)||(12426544-12426679)
chr7 (126-256)||(20397823-20397953)
chr7 (126-256)||(35427669-35427799)
chr7 (126-253)||(10599325-10599453)
chr7 (113-256)||(7107638-7107781)
chr7 (127-255)||(46680840-46680968)
chr7 (126-234)||(12085034-12085142)
chr7 (152-256)||(15074630-15074729)
chr7 (126-265)||(6173938-6174072)
chr7 (130-272)||(17351486-17351627)
chr7 (126-253)||(26563932-26564059)
chr7 (143-251)||(46449805-46449913)
chr7 (114-256)||(4826760-4826901)
chr7 (126-231)||(8566114-8566219)
chr7 (130-187)||(36655436-36655493)
chr7 (125-265)||(18672102-18672241)
chr7 (201-256)||(7107715-7107770)
chr7 (126-213)||(10007627-10007714)
chr7 (146-253)||(22055760-22055867)
chr7 (151-254)||(26563956-26564059)
chr7 (113-171)||(29365714-29365772)
chr7 (126-256)||(36245384-36245514)
chr7 (126-171)||(2523863-2523908)
chr7 (200-265)||(12085023-12085088)
chr7 (199-256)||(23248676-23248733)
chr7 (130-171)||(23870993-23871034)
chr7 (127-256)||(28677325-28677454)
chr7 (130-171)||(41850610-41850651)
chr7 (142-214)||(32903572-32903644)
chr7 (199-231)||(46449811-46449843)
[»] scaffold2107 (2 HSPs)
scaffold2107 (113-254)||(453-594)
scaffold2107 (201-256)||(528-583)
[»] scaffold0144 (1 HSPs)
scaffold0144 (113-256)||(38833-38976)
[»] scaffold0221 (1 HSPs)
scaffold0221 (126-256)||(11038-11168)
[»] scaffold0246 (1 HSPs)
scaffold0246 (126-254)||(15165-15292)
[»] scaffold0024 (1 HSPs)
scaffold0024 (126-256)||(35962-36092)
[»] scaffold0592 (1 HSPs)
scaffold0592 (127-236)||(407-516)
[»] scaffold0007 (1 HSPs)
scaffold0007 (126-229)||(77355-77458)
[»] scaffold0009 (1 HSPs)
scaffold0009 (126-250)||(3641-3774)
[»] scaffold0067 (1 HSPs)
scaffold0067 (129-251)||(5229-5351)
[»] scaffold0018 (1 HSPs)
scaffold0018 (152-250)||(183828-183926)
[»] scaffold0005 (1 HSPs)
scaffold0005 (196-271)||(54646-54721)
[»] scaffold0242 (1 HSPs)
scaffold0242 (114-171)||(16505-16562)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 6e-56; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 22782032 - 22781890
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  22782032 atacttcctccggtcctatttataagagaaagttgattttttggatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattat 22781933  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  22781932 ttaatgtatctaaaaagtaaattgtttcttgtaaataggaccg 22781890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 2339428 - 2339298
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2339428 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 2339329  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  2339328 aaaagtaaattgtctcttgtaaataggaccg 2339298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 33642592 - 33642466
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33642592 tatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 33642493  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    ||||||||  |||||||||||||||||    
T  33642492 gtaaattatctcttgtaaataggaccg 33642466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 29563809 - 29563666
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||||||||  |||||||||| |||| |||||||| |||||||||||||| |||||||||| |||||||| ||||||||| |||||||||||||||||    
T  29563809 aatacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagttaagaacctaaaccaaatacataaatta 29563710  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  29563709 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 29563666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 34028534 - 34028391
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  34028534 aatactccctccggtcctatttacaagagaaagttgaccttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 34028435  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||  | ||||||||||||||||    
T  34028434 tttaatgtatctaaaaagtaaattgttacttgtaaataggaccg 34028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 41569106 - 41569245
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  41569106 gtcctatttacaagagaaagttgattttttagatatattgaataatgtatgtatctagtcaagaacctcaaccaaatacataaattatttaatatatcta 41569205  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||  ||||||||||||||| || ||||||||    
T  41569206 aaaagtaaattgtttcttgtaaataggatcggatgaagta 41569245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 2229067 - 2229210
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | |||||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  2229067 aatactccctccggtcctatttacaagagacagttgactttttagatacaatgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 2229166  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||||||||||||||||||||   |||||||||||||||||    
T  2229167 ttcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 2229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 25848105 - 25847978
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  25848105 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 25848006  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||||||||   ||||||||||||||    
T  25848005 aaaagtaaattgtctcttgtaaatagga 25847978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 27793335 - 27793204
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||||||| ||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  27793335 gtcctatttacaagagaaagttgactttttagatatattcaataatgtatatatctggtcaagaacctaaaccaaatacataaattatttaatgcatcta 27793236  T
Q  226 aaaagtaaattaattcttgtaaataggaccga 257  Q
    ||||||||||||  ||||||||||||||||||    
T  27793235 aaaagtaaattatctcttgtaaataggaccga 27793204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 42189941 - 42189818
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| ||    
T  42189941 gtcctatttatatgataaagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaattatttaatatattta 42189842  T
Q  226 aaaagtaaattaattcttgtaaat 249  Q
    |||||||||||   ||||||||||    
T  42189841 aaaagtaaattgtctcttgtaaat 42189818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 43135195 - 43135072
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||||||||  |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  43135195 aatacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 43135096  T
Q  213 tttaatgtatctaaaaagtaaatt 236  Q
    || |||||||||||||||||||||    
T  43135095 ttcaatgtatctaaaaagtaaatt 43135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 8242373 - 8242251
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||    
T  8242373 atactccctctagtcctatttataaaagaaatttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatcat 8242274  T
Q  214 ttaatgtatctaaaaagtaaatt 236  Q
    ||||||||| |||||||||||||    
T  8242273 ttaatgtatttaaaaagtaaatt 8242251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 37564641 - 37564771
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||    
T  37564641 gtcctatttataagagaaagttgactttttaaatacattgaataatgtatgcatctagttaagaacctaaaccaaatacataaattatttaatgtattta 37564740  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  37564741 aaaagtaaattgtctcttgtaaataggaccg 37564771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 30923920 - 30924041
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  30923920 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatt 30924019  T
Q  215 taatgtatctaaaaagtaaatt 236  Q
    ||||||||||||||||||||||    
T  30924020 taatgtatctaaaaagtaaatt 30924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 40465249 - 40465358
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40465249 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 40465348  T
Q  227 aaagtaaatt 236  Q
    ||||||||||    
T  40465349 aaagtaaatt 40465358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 11293197 - 11293337
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||| ||||||||||| ||    
T  11293197 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccatttacataaatgatttaatgtattta 11293296  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagtaa 266  Q
    |||||||||||   ||||||||||||||||| | |||||||    
T  11293297 aaaagtaaattgtctcttgtaaataggaccggaggaagtaa 11293337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 43295074 - 43295202
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  43295074 tcctatttataagagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataa 43295173  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    |||||  |||  || |||||||||||||||    
T  43295174 aaagt-tatttgtttttgtaaataggaccg 43295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 32159044 - 32159171
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| |||||||||||||| |||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  32159044 gtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtatcta 32159143  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||||||||   ||||||||||||||    
T  32159144 aaaagtaaattgtctcttgtaaatagga 32159171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 12270070 - 12270196
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| ||||||||||||| ||||||| ||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  12270070 tatttacaagagaaagttgactttttagatacatcgaataatatatatatttagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 12270169  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    |||||||   |||||||||||||||||    
T  12270170 gtaaattgtctcttgtaaataggaccg 12270196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 41915732 - 41915602
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  41915732 gtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaataatctaaaccaaatacataaattatttaatgtatcta 41915633  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| ||||||   |||| ||||||||||||    
T  41915632 aaaattaaattgtctcttataaataggaccg 41915602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 25878170 - 25878305
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||| |||| |||||||||||||||| ||| |||| |||||| |||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||    
T  25878170 atactccctccagtcctatttataagagaaaattgactttttaaatacattgaagaatgtatgtatctagtcaagaacctaaatcaaatacataaattat 25878269  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
     |||||||||| |||||||||||  ||||||||||||    
T  25878270 ataatgtatct-aaaagtaaattgtttcttgtaaata 25878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 34157799 - 34157671
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||| ||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  34157799 gtcctatttacaagagaaatttgaatttttggatacatcgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 34157700  T
Q  226 -aaaagtaaattaattcttgtaaatagga 253  Q
     ||||||||||||  ||||||||||||||    
T  34157699 aaaaagtaaattatctcttgtaaatagga 34157671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 7668329 - 7668202
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||  |||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  7668329 gtcctatttacaagagaaaattgtctttttaaatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 7668230  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||| ||||||   ||||||||||||||    
T  7668229 aaaaataaattgtctcttgtaaatagga 7668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 3799713 - 3799859
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||| |||||||||| ||||| |  ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  3799713 aatactccctccggtcccatttataagagaaagtcggctttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaatta 3799812  T
Q  213 tttaatgtatct-aaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    |||||||||| | ||||||||||||   | |||||||||||||||||    
T  3799813 tttaatgtatttaaaaaagtaaattgtctattgtaaataggaccgaa 3799859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 40834273 - 40834171
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| ||| |||  ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  40834273 tcctatttataagagaaaattgtctttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 40834174  T
Q  227 aaa 229  Q
    |||    
T  40834173 aaa 40834171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 45146003 - 45145877
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||    |||||||||||| |||||| |||||||||||||||||||||||    
T  45146003 gtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta----gtcaagaacctaaaccaaaaacataaattatttaatgtatcta 45145908  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  45145907 aaaagtaaattgtctcttgtaaataggaccg 45145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 256
Target Start/End: Original strand, 42351194 - 42351338
Alignment:
Q  112 gaatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatt 211  Q
    ||||||| ||||  ||| |||||| |||| || ||||| |||||||||||||| |||||| ||| |||||||||||||||||| | |||||| |||||||    
T  42351194 gaatactccctccggtcttatttacaagagaatgttgactttttagatacattaaataatatatgtatctagtcaagaacctaaatcaaatatataaatt 42351293  T
Q  212 atttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||||||| ||||||   |||||||||||||||||    
T  42351294 atttaatgtatctaaaaaataaattgtctcttgtaaataggaccg 42351338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 33837719 - 33837588
Alignment:
Q  126 gtcctatttataagataaagttgatttttt-agatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct 224  Q
    |||||||||| |||| |||||||||||||| | |||||||||||||| ||| |||||||||||||| ||| || |||| |||||||||||||||||||||    
T  33837719 gtcctatttacaagagaaagttgatttttttaaatacattgaataatttatgtatctagtcaagaatctaaactaaatgcataaattatttaatgtatct 33837620  T
Q  225 aaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||   |||||||||||| ||||    
T  33837619 aaaaagtaaattgtctcttgtaaatagaaccg 33837588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 254
Target Start/End: Complemental strand, 29916676 - 29916537
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||| ||||||||| ||||||||||| ||  |||| |||||| |||||||||||| |||| | || ||||||||||| || |||||||||||||||||||    
T  29916676 tactccctctagtcttatttataagagaagattgactttttatatacattgaatattgtagt-atttagtcaagaacttaaaccaaatacataaattatt 29916578  T
Q  215 taatgtatcta-aaaagtaaattaattcttgtaaataggac 254  Q
    ||||||||||| |||||||||||  ||||||||||||||||    
T  29916577 taatgtatctaaaaaagtaaattgtttcttgtaaataggac 29916537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 16928840 - 16928941
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||| |||| ||||||||||| |||| || |||||  ||||||||| |||||||||| ||| |||||| ||||||| ||| |||||||||||||||||||    
T  16928840 tactccctccagtcctatttacaagagaatgttgacattttagataaattgaataatttatgtatctactcaagaatctaaaccaaatacataaattatt 16928939  T
Q  215 ta 216  Q
    ||    
T  16928940 ta 16928941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 36366162 - 36366033
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| |||| ||| |    
T  36366162 gtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattgaatgaatcaa 36366064  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  ||||| || |||||||||    
T  36366063 aaaagtaaattgtttcttatatataggaccg 36366033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 10839762 - 10839818
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  10839762 tacttcctccagtcctatttataagaaaaaattgactttttagattcattgaataat 10839818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 236
Target Start/End: Original strand, 35011209 - 35011331
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||||||||||||||| |||||| ||||||||||| |||| ||||||  || || |||| | ||||  || ||||||||||| || ||    
T  35011209 aatactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaa-atagaccaaatacatcaacta 35011307  T
Q  213 tttaatgtatctaaaaagtaaatt 236  Q
    || |||| ||| ||||||||||||    
T  35011308 ttcaatgaatcaaaaaagtaaatt 35011331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 32159097 - 32159040
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||| ||||||||||||||||||||||| || |   |||||||||||||||||||    
T  32159097 atacatacattatttaatgtatctaaaaagtcaaatttctcttgtaaataggaccgaa 32159040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 8453731 - 8453687
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||    
T  8453731 tcctatttataagaaaaatttgattttttagatacattgagtaat 8453687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 234
Target Start/End: Original strand, 6197905 - 6197940
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaa 234  Q
    |||||||| |||||||||||||||||||||||||||    
T  6197905 aaatacattaattatttaatgtatctaaaaagtaaa 6197940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 6354731 - 6354798
Alignment:
Q  200 aatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagtaat 267  Q
    ||||||||||||||| |||| ||||||||| | ||||| ||||| |||||||||  | ||||||||||    
T  6354731 aatacataaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaagtaat 6354798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 41915679 - 41915734
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||||    
T  41915679 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccg 41915734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 35149806 - 35149676
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||||||||||||||||||  ||||  ||||  || ||||| ||| ||||  || ||||||||||| | ||||  |||  ||| |    
T  35149806 gtcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaattaatcaa 35149707  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| || |  ||||| ||||||||||||    
T  35149706 aaaagtcaaatgtttcttataaataggaccg 35149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 45145951 - 45146005
Alignment:
Q  202 tacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| |||||| |||||||||||||||| ||||   |||||||||||||||||    
T  45145951 tacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccg 45146005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 11293250 - 11293193
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||| |||||| |||||||||||||||| || |   |||||||||||||||||||    
T  11293250 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccgaa 11293193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 25848050 - 25848107
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||| |||||| |||||||||||||||| || |   |||||||||||||||||    
T  25848050 aaatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccg 25848107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 7693113 - 7693173
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||| ||||| | |||| ||||||||||| ||||  ||||| ||||||||||||    
T  7693113 accaaatacattaattactcaatgaatctaaaaagtcaattttttcttataaataggaccg 7693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 24915254 - 24915318
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||| |||||||||||| ||||||||||| ||||  ||| | |||||||||||| ||| ||||    
T  24915254 atacatcaattatttaatgaatctaaaaagttaattttttcatataaataggaccggatgtagta 24915318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 29563743 - 29563807
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| |||||||||||||||| || |   ||||||||||||||||| | ||||||    
T  29563743 atacatacattattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggaggaagta 29563807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 30923984 - 30923920
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| |||||||||||||||| || |   ||||||||||||||||| | ||||||    
T  30923984 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 40465301 - 40465249
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    ||||||| |||||| |||||||||||||||| ||||   ||||||||||||||    
T  40465301 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatagga 40465249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 43135129 - 43135193
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| |||||||||||||||| || |   ||||||||||||||||| | ||||||    
T  43135129 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagta 43135193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 28359081 - 28359220
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  28359081 gtcctatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaaccaaaaccaaatacataaattatttaatgtatcta 28359180  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||  |||||||||||||||||| ||||||||    
T  28359181 aaaagtaaattgtttcttgtaaataggaccggatgaagta 28359220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 2352447 - 2352317
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  2352447 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatatatcta 2352348  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  2352347 aaaagtaaattgtctcttgtaaataggaccg 2352317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 14281728 - 14281598
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  14281728 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 14281629  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  14281628 aaaagtaaattgtctcttgtaaataggaccg 14281598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 255
Target Start/End: Original strand, 2961114 - 2961243
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  2961114 gtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatcta 2961213  T
Q  226 aaaagtaaattaattcttgtaaataggacc 255  Q
    |||||||||||   ||||||||||||||||    
T  2961214 aaaagtaaattgtctcttgtaaataggacc 2961243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 28989406 - 28989269
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| || |||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  28989406 tatttacaagagaaagttgacttattagatacattgaataatgtacgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatctaaaaa 28989307  T
Q  230 gtaaattaattcttgtaaataggaccgaatgaagtaat 267  Q
    |||||||  |||||||||||||||||||| | ||||||    
T  28989306 gtaaattgtttcttgtaaataggaccgaagggagtaat 28989269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 115 - 255
Target Start/End: Original strand, 10380389 - 10380529
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  |||||||||| |||| ||| |||| |||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  10380389 tacttcctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatt 10380488  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggacc 255  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  10380489 taatgtatctaaaaagtaaattgtctcttgtaaataggacc 10380529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 10065265 - 10065392
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  10065265 gtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctcgtcaagaacctaaatcaaatacataaattatttaatgtatcta 10065364  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||||||||  || ||||||||||||    
T  10065365 aaaagtaaattgttttttgtaaatagga 10065392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 114 - 265
Target Start/End: Complemental strand, 29312589 - 29312438
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||  |||||||||| || | |||||||| |||||| |||||||||||||||||  |||||||||||||||||| | ||||||||||||||||    
T  29312589 atacttcctccggtcctatttacaacagaaagttgactttttaaatacattgaataatgtacgtatctagtcaagaacctaaatcaaatacataaattat 29312490  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||||||||||||||   ||||||||||||||||| | ||||||    
T  29312489 ttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 29312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 45536177 - 45536303
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| ||| |||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  45536177 tatttacaagagaaaattgactttttagatacattcaataatgtatttatcaagtcaagaacctaaaccaaatacataaattatttgatgtatctaaaaa 45536276  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    ||||||||  |||||||||||||||||    
T  45536277 gtaaattatctcttgtaaataggaccg 45536303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 9548810 - 9548671
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||||||||||| ||||| | |||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  9548810 gtcctatttacaagagaaaattgactttttagatacattgaagaatgtgtgtatctaatcaagaacctaaatcaaatacataaattatttaatgtatcta 9548711  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||  |||||||||||||||||| | ||||||    
T  9548710 aaaagtaaattgtttcttgtaaataggaccggaggaagta 9548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 9301929 - 9302059
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||| | |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9301929 gtcctatttacaagagacagttaactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 9302028  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||| ||||||||||||    
T  9302029 aaaagtaaattgtctcttataaataggaccg 9302059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 38830621 - 38830491
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| |||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  38830621 gtcctatttacaagagacagttgactttttaaatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 38830522  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  38830521 aaaagtaaattgtctcttgtaaataggaccg 38830491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 26545146 - 26545025
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  ||| |||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  26545146 tacttcctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatt 26545047  T
Q  215 taatgtatctaaaaagtaaatt 236  Q
    ||||| ||||||||||||||||    
T  26545046 taatgaatctaaaaagtaaatt 26545025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 24594932 - 24595055
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    |||||||||| |||||||||| ||||||||| |||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  24594932 ctatttataaaataaagttgactttttagat-cattgaattatgtatgtatctagtcaagaacctaaaccaaatatataaattatttaatgtatctaaaa 24595030  T
Q  229 agtaaattaattcttgtaaatagga 253  Q
    ||||||||   ||||||||||||||    
T  24595031 agtaaattgtctcttgtaaatagga 24595055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 6784797 - 6784674
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||||||||  | |||||| |||||||||||||||||||||    
T  6784797 gtcctatttataatagaaagttgattttttagatacattgaataatgtatgtatctaatcaagaacctgaatcaaatatataaattatttaatgtatcta 6784698  T
Q  226 aaaagtaaattaattcttgtaaat 249  Q
    |||||||||||  ||| |||||||    
T  6784697 aaaagtaaattgtttcctgtaaat 6784674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 23398198 - 23398088
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||   ||||||    
T  23398198 ttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaagttgtctcttgt 23398099  T
Q  246 aaataggaccg 256  Q
    |||||||||||    
T  23398098 aaataggaccg 23398088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 26550285 - 26550407
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||   ||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||||||||    
T  26550285 atacttcctccgatcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaagcaaatacataaattat 26550384  T
Q  214 ttaatgtatctaaaaagtaaatt 236  Q
    ||||||| |||||||||||||||    
T  26550385 ttaatgtttctaaaaagtaaatt 26550407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 33325471 - 33325347
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||| || ||| |||| |||||||||||||||||||||||||    
T  33325471 gtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccagatacataaattatttaatgtatcta 33325372  T
Q  226 aaaagtaaattaattcttgtaaata 250  Q
    |||| ||||||   |||||||||||    
T  33325371 aaaaataaattgtctcttgtaaata 33325347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 1673982 - 1674109
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||| |||||||||| |||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  1673982 gtcctatttacaagagaaagttgactttctagatacattaaataatatatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 1674081  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||| ||||||   ||||||||||||||    
T  1674082 aaaaataaattgtctcttgtaaatagga 1674109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 40161187 - 40161307
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| ||| |||| |||||| |||||||||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  40161187 tatttacaagagaaaattgactttttaaatacattgaataatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaa 40161286  T
Q  230 gtaaattaattcttgtaaata 250  Q
    |||||||   |||||||||||    
T  40161287 gtaaattgtctcttgtaaata 40161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 26733923 - 26733793
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||| ||| |||||| | | |||||| ||| ||||||||||||||  || |||||||||||| |||||||||||||||||    
T  26733923 gtcctatttataagagaaagttgactttatagataaaataaataatttatgtatctagtcaagaatataaaccaaatacatagattatttaatgtatcta 26733824  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| ||||  ||||||||||||||||||    
T  26733823 aaaagttaattgtttcttgtaaataggaccg 26733793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 30264785 - 30264923
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||  ||| ||||||||||| || ||||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  30264785 tcctatttacgagagaaagttgatttgttggatacattgaataatatatgtatctagtcaagaacctaaaccaaatatataaattatttaatatatctaa 30264884  T
Q  227 aaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||  |  || ||||||||||||||| | ||||||    
T  30264885 aaagtaacatgtttattgtaaataggaccggaggaagta 30264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 7796100 - 7796239
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| | |  ||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  7796100 gtcctatttacaagagaaaatagtctttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaattatttaatgtatcta 7796199  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||| ||||||    |||||||||| ||||| | ||||||    
T  7796200 aaaaataaattgtcacttgtaaatatgaccggaggaagta 7796239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 15289907 - 15289808
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||| || |||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  15289907 tatttacaagagaaagttgactttttagatacattgaataatgtatgtacctagtcaataacctaaaccaaatatataaattatttaatgtatctaaaaa 15289808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 34718988 - 34718899
Alignment:
Q  167 ataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||  ||||||||||| || ||| |||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||    
T  34718988 ataatgtacgtatctagtcaaaaatctaaaccaaatacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccg 34718899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 23537381 - 23537458
Alignment:
Q  176 ttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||   ||||||||||||||    
T  23537381 ttatttagtcaagaacctaaaccaaatacataaattatttaatttatctaaaaaataaattgtctcttgtaaatagga 23537458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 46320171 - 46320286
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| || ||||| |||||||||   ||||||||| ||| ||||||||||| ||     |||||||||||||||||||| |||||||||||||    
T  46320171 tatttataagagaaggttgactttttagat---ttgaataatatatgtatctagtcaataa-----accaaatacataaattatttgatgtatctaaaaa 46320262  T
Q  230 gtaaattaattcttgtaaatagga 253  Q
    |||||||   ||||||||||||||    
T  46320263 gtaaattgtctcttgtaaatagga 46320286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 24463411 - 24463324
Alignment:
Q  142 aaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||||||| || |||| |||||||||| ||| |  |||||||| || |||||||| |||||||||||||| ||||||||||    
T  24463411 aaagttgattttttaaattcattcaataatgtatgtatttgatcaagaacataaaccaaatatataaattatttaatatatctaaaaa 24463324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 276
Target Start/End: Complemental strand, 43929483 - 43929334
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||| | ||||||||| |||| ||||||  || || ||||   ||||  || ||||||||||| || ||||||||| ||| |    
T  43929483 gtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaa-tagaccaaatacatcaactatttaatgaatcaa 43929385  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagtaattttttattt 276  Q
    |||||||||||  ||||| || ||||||||| | | ||||| |||||||||    
T  43929384 aaaagtaaattgtttcttatatataggaccggagggagtaactttttattt 43929334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 49944843 - 49944973
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||| || | ||||||||| |||||||||||  || ||||| ||| ||||  || ||||||||||| | ||||  |||| ||| |    
T  49944843 gtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatcaa 49944942  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| | || |  ||||||||||||||||||    
T  49944943 aaaaatcaaatgtttcttgtaaataggaccg 49944973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 50155449 - 50155391
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||  ||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  50155449 aatacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 50155391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 10380453 - 10380389
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| |||||||||||||||| ||||   ||||||||||||||||| | ||||||    
T  10380453 atacatacattattgaatgtatctaaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 29256747 - 29256691
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||  ||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 29256691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 1674037 - 1673978
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||||| ||||||||||||||||| ||||| || |   |||||||||||||||||||    
T  1674037 aaatacatatattatttaatgtatctagaaagtcaactttctcttgtaaataggaccgaa 1673978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 9301982 - 9301927
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| ||||||||||||||||||||||| || |   |||||||||||||||||    
T  9301982 atacatacattatttaatgtatctaaaaagttaactgtctcttgtaaataggaccg 9301927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 33325418 - 33325473
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| |||||| |||||||||||||||| || |  ||||||||||||||||||    
T  33325418 atacatacattattcaatgtatctaaaaagtcaactttttcttgtaaataggaccg 33325473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 258
Target Start/End: Complemental strand, 38040425 - 38040282
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  ||||||||||||||| ||| |||| ||||||||| |||||| ||||  || ||||| ||| ||||  || | |||||| || | ||||     
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 38040326  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
     |||| ||| ||||||| || |  ||||| ||||||||||||||    
T  38040325 caatgaatcaaaaaagtcaaatgtttcttataaataggaccgaa 38040282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 44939200 - 44939074
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| ||| |||||||||||||| |||||| ||||  || |||||| || ||||  || ||||||||||| | ||||  |||| ||  |||||    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaa 44939101  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    || || |  ||||| ||||||||||||    
T  44939100 gtcaaatgtttcttataaataggaccg 44939074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 25021316 - 25021380
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||| ||||||| |||  ||||||||||| ||||  ||||||||||||| |||| ||||||||    
T  25021316 atacatcaattattcaataaatctaaaaagtcaattgtttcttgtaaatagaaccggatgaagta 25021380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 27422992 - 27423048
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccga 257  Q
    |||||||||||||| ||||||| |||||||| |||| ||| || ||||| |||||||    
T  27422992 atacataaattattcaatgtatttaaaaagtcaattgatttttataaatgggaccga 27423048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 29892149 - 29892270
Alignment:
Q  133 ttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagta 232  Q
    |||||||| | |||||| ||||||||||  ||||||||| ||| ||||  ||| | || ||| |||| ||| || ||||||| |||| |||||||||||     
T  29892149 ttataagaaacagttgactttttagata--ttgaataatttatgtatccggtctaaaatctaaaccagatatatcaattattgaatgaatctaaaaagtc 29892246  T
Q  233 aattaattcttgtaaataggaccg 256  Q
    ||||  ||| | ||||||||||||    
T  29892247 aattgtttcctataaataggaccg 29892270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 34146941 - 34146897
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| ||| |||||||||| ||| |||||||||||    
T  34146941 tcctatttataagaaaaaattgatttttttgattcattgaataat 34146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 390815 - 390945
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  390815 gtccaatttataagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 390914  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  390915 aaaagtaaattgtctcttgtaaataggaccg 390945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 766425 - 766567
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||   |||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||    
T  766425 atacttcctccgatcctatttataagagaaagtcgattttttagatacattgaataatgtatgtatttagtcaataacctaaaccaaatacataaattat 766524  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||||| |||||||  |||||||||||||||||    
T  766525 ttaatgtatctaaaaaataaattatctcttgtaaataggaccg 766567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 7405595 - 7405450
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7405595 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 7405496  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||||||||||||||||||||   |||||||||||||||||||    
T  7405495 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaa 7405450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 885612 - 885739
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  885612 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 885711  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||||||||   ||||||||||||||    
T  885712 aaaagtaaattctctcttgtaaatagga 885739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 24949628 - 24949771
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  24949628 aatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaatta 24949727  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  24949728 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 24949771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 31971027 - 31971170
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  31971027 aatactccctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 31971126  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||||| |||||||   |||||||||||||||||    
T  31971127 tttaatgtatctaaaatgtaaattgtctcttgtaaataggaccg 31971170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 6801564 - 6801700
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    |||||||||  |||| ||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  6801564 ctatttatataataaggttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacatgaattatttaatgtatctaaaa 6801663  T
Q  229 agtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||||  |||||||||||||||| | ||||||||    
T  6801664 agtaaattgtttcttgtaaataggactggatgaagta 6801700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 6047806 - 6047936
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| || | |||||| | ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  6047806 gtcctatttacaacagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatcta 6047905  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||  ||||||||||| |||||    
T  6047906 aaaagtaaattatctcttgtaaatatgaccg 6047936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 33859641 - 33859496
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| |||||| | ||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  33859641 aatactccctccggtcctatttacaagagaaagttaactttttagatacatcgaataatgtatgtatctagtcaagaaactaaaccaaatacataaatta 33859542  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||||||||||||||||||||   | |||||||||||||||||    
T  33859541 tttaatgtatctaaaaagtaaattgtctattgtaaataggaccgaa 33859496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 17225269 - 17225380
Alignment:
Q  142 aaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattc 241  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||   ||    
T  17225269 aaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatatataaattatttaatgtatctaaaaagtaaattgtctc 17225368  T
Q  242 ttgtaaatagga 253  Q
    ||||||||||||    
T  17225369 ttgtaaatagga 17225380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 34639039 - 34639182
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    ||||||||| ||||||||||| |||| | |||||| |||||||||||||  |||||||||| |||||||||||||||||| |||||||||||||||| ||    
T  34639039 tacttcctccagtcctatttacaagagacagttgactttttagatacatgcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattttt 34639138  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
     |||||||||||||||||||||   |||| ||||||||||||||    
T  34639139 caatgtatctaaaaagtaaattgtctcttataaataggaccgaa 34639182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 6045691 - 6045821
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||| ||| |||||||||||||| ||| | ||||||||||||||||||||| ||||||    
T  6045691 gtcctatttataagagaaagttgaccttttagatacattgaataatctatgtatctagtcaagaatctaaatcaaatacataaattatttaatctatcta 6045790  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  6045791 aaaagtaaattgtctcttgtaaataggaccg 6045821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 114 - 272
Target Start/End: Original strand, 8558912 - 8559069
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||| |||| ||||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  8558912 atactccctccagtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaacctaaaccaaatacataaattat 8559011  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagtaatttttt 272  Q
    || ||||||||||||| ||||||   ||||||||||| || || | | |||||||||||    
T  8559012 tt-atgtatctaaaaaataaattgtctcttgtaaataagatcggagggagtaatttttt 8559069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 30686679 - 30686554
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| |||| ||| |||| |||||| |||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  30686679 ctatttacaagagaaaattgactttttaaatacattgaataatgtatgtatctagtcaaaaacctaaacgaaatacataaattatttaatgtatctaaaa 30686580  T
Q  229 agtaaattaattcttgtaaataggac 254  Q
    ||||||||   |||||||||||||||    
T  30686579 agtaaattgtctcttgtaaataggac 30686554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 13144220 - 13144344
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| || |||||||||| |||||||||||||| ||| |||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  13144220 tcctatttacaaaataaagttgactttttagatacattcaattatgtatgtatcaagtcaagaacctaaacaaaatacataaattatttaatgtatctaa 13144319  T
Q  227 aaagtaaattaattcttgtaaatag 251  Q
    |||||||  ||  ||||||||||||    
T  13144320 aaagtaatctatctcttgtaaatag 13144344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 14931371 - 14931266
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    |||| ||||||||||||||||||||||||| ||||     || |||||| |||||||||||||||||||||||||||||||||||||||||   |||| |    
T  14931371 ttgactttttagatacattgaataatgtatgtatc-----aaaaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttat 14931277  T
Q  246 aaataggaccg 256  Q
    |||||||||||    
T  14931276 aaataggaccg 14931266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 22898948 - 22898861
Alignment:
Q  169 aatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||   |||||||||||||||||    
T  22898948 aatgtatgtatatagtcaagaacctaaaccaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 22898861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 36351 - 36429
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||||||| |||||||||| ||| ||||||||||| || ||| ||||||||||||||||||||||| ||||||||||    
T  36351 tttttagatatattgaataatttatatatctagtcaaaaatctaaaccaaatacataaattatttaatatatctaaaaa 36429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 22881012 - 22880926
Alignment:
Q  170 atgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| ||| |||||||||||||| || ||||| |||||||||| |||||||||||||||||||||   |||||||||||||||||    
T  22881012 atgtatgtatatagtcaagaacctaaactaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 22880926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 1158325 - 1158383
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||| ||||||||||||||||    
T  1158325 accaaatacatcaattattcaatgtatttaaaaagtcaattatttcttgtaaataggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 2810089 - 2810218
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||| | |||||| ||||||||||| |||| ||||||  || || |||||| ||||  ||  |||||||||| || |||| |||| ||  |    
T  2810089 gtcctatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaa-atagtccaaatacatcaactattcaatgaatgaa 2810187  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||| ||||| || |||||||||    
T  2810188 aaaagtaaattatttcttatatataggaccg 2810218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 258
Target Start/End: Complemental strand, 5484011 - 5483867
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    |||||||||||  ||||||||  |||| | | |||| ||||||||| | |||||||||  || ||| ||||| | ||  || || |||||||| ||||||    
T  5484011 atacttcctctgctcctatttgcaagaaacaattgactttttagattcgttgaataattaatgtatttagtctaaaatatagacaaaatacatcaattat 5483912  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    |||||  || |||||||| || || || |||||||||||||||||    
T  5483911 ttaataaatttaaaaagtcaaatatttattgtaaataggaccgaa 5483867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 28630763 - 28630891
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||| |||| |||||  || |||||| ||||  || ||||| ||| | ||  || ||||||||||||| ||||  |||| |||||    
T  28630763 gtcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatcta 28630862  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||| ||||  ||||| ||||||||||    
T  28630863 aaaagtcaattgtttcttataaataggac 28630891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 24949694 - 24949639
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||||    
T  24949694 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccg 24949639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 1158383 - 1158278
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | | |||| |||||| ||||||||||||||  || ||| | ||| ||||  || ||| ||||||| ||||||| |||| |||||    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatcta 1158284  T
Q  226 aaaagt 231  Q
    ||||||    
T  1158283 aaaagt 1158278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 8558977 - 8558924
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||    
T  8558977 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggac 8558924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 28863337 - 28863410
Alignment:
Q  133 ttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacat 206  Q
    |||||||||||| |||||||||||| | ||||| ||||| ||| ||||| ||| ||||  || |||||||||||    
T  28863337 ttataagataaaattgattttttagtttcattgtataatttatgtatcttgtctagaatataaaccaaatacat 28863410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 2943322 - 2943382
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||| || ||||||||| ||| ||||||||||||  ||||| || |||||||||    
T  2943322 accaaatacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggaccg 2943382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 492315 - 492443
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  492315 gtcctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 492414  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||||  ||||||||||||||||    
T  492415 aaaagtaaattgtttcttgtaaataggac 492443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 42263480 - 42263608
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  42263480 gtcctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 42263579  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||||  ||||||||||||||||    
T  42263580 aaaagtaaattgtttcttgtaaataggac 42263608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 29866233 - 29866090
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  29866233 aatactccctccggtcctatttacaagataaagttgactttttaggtacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 29866134  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  29866133 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 29866090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 13775862 - 13775719
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||||||||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||    
T  13775862 aatactccctccggtcctatttataagagaaagttgactttttagatacattaaataatgtatgtatctagtcaaaaacctaaaccaaatacataaatta 13775763  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  13775762 tttaatatatctaaaaagtaaattatctcttgtaaataggaccg 13775719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 32881042 - 32880906
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| ||||||||||||| |||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  32881042 ctatttacaagataaagttgactttttagatatattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaa 32880943  T
Q  229 agtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||||   |||||||||||||| |||||||||||    
T  32880942 agtaaattgtctcttgtaaataggatcgaatgaagta 32880906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 43657939 - 43658063
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  43657939 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaa 43658038  T
Q  230 gtaaattaattcttgtaaataggac 254  Q
    ||||||||  |||||||||||||||    
T  43658039 gtaaattatctcttgtaaataggac 43658063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 32197514 - 32197387
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  32197514 gtcctatttacaagagaaagttgattttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatcta 32197415  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||| ||||||  ||| |||||||||||    
T  32197414 aaaaataaattgtttcatgtaaatagga 32197387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 16241277 - 16241407
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16241277 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 16241376  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  16241377 aaaagtaaattgtctcttgtaaataggaccg 16241407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 41260175 - 41260033
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||  |||||||||| |||| ||||| || |||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  41260175 atacttcctccggtcctatttacaagagaaagtcgactttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattat 41260076  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||| ||||||||||||   |||||||||||||||||    
T  41260075 ttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccg 41260033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 20427150 - 20427009
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  20427150 tactccctctggtcttatttataagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatt 20427051  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| |||||||||||||||||   |||||||||||||||||    
T  20427050 taatctatctaaaaagtaaattgtctcttgtaaataggaccg 20427009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 25891955 - 25892084
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| | |||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  25891955 tcctatttataagagacagttgactttttagataaattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaa 25892054  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||   |||||||||||||||||    
T  25892055 aaagtaaattgtctcttgtaaataggaccg 25892084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 40430677 - 40430806
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| ||| |||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40430677 tcctatttataagagaaaattgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 40430776  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||   |||| ||||||||||||    
T  40430777 aaagtaaattgtctcttataaataggaccg 40430806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 6761603 - 6761473
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  6761603 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattattcaatgtatcta 6761504  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  6761503 aaaagtaaattgtctcttgtaaataggaccg 6761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 7765791 - 7765933
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||    
T  7765791 aatactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataattta 7765890  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggacc 255  Q
    ||||||||||||||||||||||||   |||| |||||||||||    
T  7765891 tttaatgtatctaaaaagtaaattgtctcttataaataggacc 7765933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 2100154 - 2100025
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2100154 tcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 2100055  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||| |||  |   |||||||||||||||||    
T  2100054 aaaataacatgtctcttgtaaataggaccg 2100025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 11363012 - 11363133
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11363012 tatttacaagagaaagttgactttttagatgcattgaataatgtatctatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 11363111  T
Q  230 gtaaattaattcttgtaaatag 251  Q
    |||||||   ||||||||||||    
T  11363112 gtaaattgtctcttgtaaatag 11363133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 45065589 - 45065715
Alignment:
Q  125 agtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct 224  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||| |||| ||| |  ||||||||||||||||||||||||||    
T  45065589 agtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtctagaatctaaattaaatacataaattatttaatgtatct 45065688  T
Q  225 aaaaagtaaattaattcttgtaaatag 251  Q
    ||||||||||||   ||||||||||||    
T  45065689 aaaaagtaaattgtctcttgtaaatag 45065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 32750338 - 32750459
Alignment:
Q  112 gaatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatt 211  Q
    ||||||| ||||  |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||||||||    
T  32750338 gaatactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaatcaaatacataaatt 32750437  T
Q  212 atttaatgtatctaaaaagtaa 233  Q
    || |||||||||||||||||||    
T  32750438 atgtaatgtatctaaaaagtaa 32750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 1944532 - 1944668
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||| |||||  ||||||||| || | |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||    
T  1944532 atactccctctgatcctatttacaaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaattcatatattat 1944631  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    |||||||||||||||||||| ||   |||||||||||    
T  1944632 ttaatgtatctaaaaagtaacttgtctcttgtaaata 1944668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 42341769 - 42341646
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||||| ||  |||||||||| |||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||    
T  42341769 aatacttcatccggtcctatttacaagagaaaattgattttttaaatacattgaataatgtatgtatctaatcaagaatctaaaccaaatacataaatta 42341670  T
Q  213 tttaatgtatctaaaaagtaaatt 236  Q
    |||||||||| |||||||||||||    
T  42341669 tttaatgtatttaaaaagtaaatt 42341646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 44737280 - 44737422
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||    
T  44737280 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaatcta-accaaatacataaatta 44737378  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||||||||||||||||||||   |||||||||||||||||    
T  44737379 ttcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 44737422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 11711354 - 11711464
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||   ||||||    
T  11711354 ttgactttttagatacattgaataatgtatgtatctagtcaagaacctaagtcaaatacataaattatttaatgtatcttaaaagtaaattgtctcttgt 11711453  T
Q  246 aaataggaccg 256  Q
    |||||||||||    
T  11711454 aaataggaccg 11711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 3265053 - 3264935
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||    ||||||||||||||||||||||||    
T  3265053 ctatttataagataatgttgattttttagatacattgaataatgtatgtatttagtcaagaacttaaaccaa----ataaattatttaatgtatctaaaa 3264958  T
Q  229 agtaaattaattcttgtaaatag 251  Q
    ||||||||   ||||||||||||    
T  3264957 agtaaattgtctcttgtaaatag 3264935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 38598605 - 38598464
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  |||||||||| || | |||||| | ||||||||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||    
T  38598605 tacttcctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggtcaagaacctaaaccaaatacataaattatt 38598506  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| ||| |||||||||||||   ||||||||||| |||||    
T  38598505 taatatatataaaaagtaaattgtctcttgtaaataagaccg 38598464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 18452706 - 18452579
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| |||||| ||| |||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  18452706 gtcctatttacaagagacagttgacttttta-atatattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatcta 18452608  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||||   |||||||||||||||    
T  18452607 aaaagtaaattgtctcttgtaaataggac 18452579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 4740844 - 4740718
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||| | |||||| |||||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||| ||| ||||||    
T  4740844 tatttacaagagaaagttaactttttaaatacattgaataatgtatgtatctaatcaagaacctataccaaatatataaattatttaatatatataaaaa 4740745  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    || ||||  ||||||||||||||||||    
T  4740744 gttaattgtttcttgtaaataggaccg 4740718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 41205504 - 41205629
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||| || ||  || ||||||||||||||||||||||| ||||||||||    
T  41205504 tatttataagagaaagttgattttttagatatattgaataatttatgtatctagtaaaaaatataaaccaaatacataaattatttaatatatctaaaaa 41205603  T
Q  230 gtaaattaattcttgtaaataggacc 255  Q
     | |||||  |||| |||||||||||    
T  41205604 attaattatctcttataaataggacc 41205629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 30864717 - 30864809
Alignment:
Q  158 atacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    |||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  30864717 atacattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 30864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 33913288 - 33913188
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| || ||||||||||||||||| ||| ||| ||||| |||| ||||||||| |||| ||| ||||||||||||||||||||||| |||||||    
T  33913288 tcctatttacaatataaagttgattttttaaatatattaaataacgtatgtatctagtcgagaatctaaaccaaatacataaattatttaatatatctaa 33913189  T
Q  227 a 227  Q
    |    
T  33913188 a 33913188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 20360579 - 20360515
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacct 193  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  20360579 ctatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacct 20360515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 39377911 - 39377980
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||| | ||||||    
T  39377911 accaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggaagaagta 39377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 39377904 - 39377844
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||    
T  39377904 accaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccg 39377844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 42470922 - 42470982
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaa 187  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||    
T  42470922 tcctatttataaaagaaagttgattttgtagatacattgaataatgtatatatctagtcaa 42470982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 22857834 - 22857917
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||| ||||||||||||||||||||| ||| |||||  || |||| ||| ||||||||||||||||||| | ||||||||||||    
T  22857834 ttgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattcattgtatctaaaaa 22857917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 265
Target Start/End: Original strand, 3037758 - 3037874
Alignment:
Q  151 tttttagatacattgaata--atgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaa 248  Q
    |||||||||||||||||||  ||  || ||||  ||| ||||  |||||||||||||||||||||| |||| ||||||||| | | ||  |||||||| |    
T  3037758 tttttagatacattgaatataattgatgtatccggtctagaatatacaccaaatacataaattattcaatgaatctaaaaaatcatttgtttcttgtata 3037857  T
Q  249 taggaccgaatgaagta 265  Q
    |||||||||||||||||    
T  3037858 taggaccgaatgaagta 3037874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 20555268 - 20555361
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatg 219  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||  || ||||| ||| ||||  || ||||||||||| | |||| |||||    
T  20555268 gtcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatg 20555361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 44736813 - 44736918
Alignment:
Q  150 ttttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaat 249  Q
    ||||||||||| ||||| |||| |||  |||||| | |||| |||  |||||||||||| |||| ||| ||||||||||||| ||||  ||||||||||     
T  44736813 ttttttagatatattgattaatttatgcatctagactagaatctaagccaaatacataatttatctaacgtatctaaaaagtcaattgtttcttgtaaaa 44736912  T
Q  250 aggacc 255  Q
    ||||||    
T  44736913 aggacc 44736918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 38983143 - 38983007
Alignment:
Q  120 cctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatg 219  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||  ||||  || ||||| ||| ||||  || || |||||||| | ||||  ||||    
T  38983143 cctctagtcctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatg 38983044  T
Q  220 tatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
     ||| ||||||| || || || || ||||||||||||    
T  38983043 aatcaaaaaagtcaaatattttttataaataggaccg 38983007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 4063269 - 4063411
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||| || |||||||||||| |||||| ||||||||||| |||| ||||||  || || ||| || ||||  || || |||||||| || ||    
T  4063269 aatactacctctggttctatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaa-atagacaaaatacatcaacta 4063367  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||| ||| ||||||||||||  ||||| || |||||||||    
T  4063368 ttcaatgaatcaaaaaagtaaattgtttcttatatataggaccg 4063411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 12486072 - 12486131
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggacc 255  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||  |||||||||||||||||    
T  12486072 accaaatacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggacc 12486131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 9152497 - 9152387
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    |||| ||||||||| |||||| ||||  || ||||||||| | ||  || ||||||||||| ||||||||||||  || ||||||| || |  |||||||    
T  9152497 ttgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactcaaaaaagtcaaatgtttcttgt 9152398  T
Q  246 aaataggaccg 256  Q
    |||||||||||    
T  9152397 aaataggaccg 9152387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 34447652 - 34447602
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattg 165  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||| |||||    
T  34447652 tactccctctggtcctatttataagaaaaagttgattttttagattcattg 34447602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 45034392 - 45034537
Alignment:
Q  110 tagaatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaa 209  Q
    ||||||||| ||||  ||||||||||||||| |||||| | ||||||||| |||| ||||||  || || |||  | ||||  || ||||||||||| ||    
T  45034392 tagaatactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaa 45034490  T
Q  210 ttatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
     |||| |||| ||| ||||||||||||  ||||| || |||||||||    
T  45034491 ctattcaatgaatcaaaaaagtaaattgtttcttatatataggaccg 45034537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 246
Target Start/End: Complemental strand, 22857917 - 22857822
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgta 246  Q
    |||||||||||| |||||||| ||| ||| | ||  |||  ||| | || |||||||||||||| |||||||||||||||| ||||  ||||||||    
T  22857917 tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaattgtttcttgta 22857822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 27596729 - 27596764
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagt 231  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27596729 accaaatacataaattattcaatgtatctaaaaagt 27596764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 27182143 - 27182089
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    ||||||||||||||||||| ||||||||| |||| | ||||  ||||||||||||    
T  27182143 accaaatacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaata 27182089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 27831685 - 27831631
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    ||||||||||||||||||| ||||||||| |||| | ||||  ||||||||||||    
T  27831685 accaaatacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaata 27831631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 38598536 - 38598606
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagtaa 266  Q
    |||| ||||||| |||||| ||||||||||||||||||| |   | ||||||||||||||| | |||||||    
T  38598536 accagatacatatattattcaatgtatctaaaaagtaaactttcttttgtaaataggaccggaggaagtaa 38598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 41205641 - 41205583
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||| ||||||||||||||| | | || |||||||||||| ||| ||||||    
T  41205641 aatacttcctctggtcctatttataagagataattaattttttagatatattaaataat 41205583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 28249079 - 28249026
Alignment:
Q  118 ttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||| ||| |||||||||||| |||||||| ||||||||| |||| ||||||    
T  28249079 ttcctccagttctatttataagaaaaagttgactttttagattcattaaataat 28249026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 11711387 - 11711323
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| |||||||||||||||| ||||   | | ||||||||||||||||| ||||    
T  11711387 atacatacattattcaatgtatctaaaaagtcaattttctttcgtaaataggaccgaatggagta 11711323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 41153248 - 41153204
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| |||||||| ||||||||| |||||| ||||    
T  41153248 tcctatttataagaaaaagttgactttttagattcattgagtaat 41153204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 42341703 - 42341767
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| ||||||| |||||| | ||||   ||||||||||||||||| ||||||||    
T  42341703 atacatacattattcaatgtatttaaaaaatcaattttctcttgtaaataggaccggatgaagta 42341767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 29382 - 29252
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29382 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 29283  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  ||||||||||||||||||    
T  29282 aaaagtaaattgtttcttgtaaataggaccg 29252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 36099640 - 36099495
Alignment:
Q  111 agaatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaat 210  Q
    |||||||| ||||  |||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36099640 agaatactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaat 36099541  T
Q  211 tatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||||   |||||||||||||||||    
T  36099540 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 36099495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 31227409 - 31227270
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31227409 gtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 31227310  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||  |||||||||||||||||| ||| ||||    
T  31227309 aaaagtaaattgtttcttgtaaataggaccggatggagta 31227270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 23125797 - 23125654
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| |||| |||| |||||| |||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  23125797 aatactccctccagtcttatttacaagagaaagttgatattttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 23125698  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  23125697 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 23125654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 5970289 - 5970419
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  5970289 gtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtgtcta 5970388  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  5970389 aaaagtaaattgtctcttgtaaataggaccg 5970419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 31854389 - 31854519
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||| ||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  31854389 gtcctaattacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatcta 31854488  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  ||||||||||||||||||    
T  31854489 aaaagtaaattgtttcttgtaaataggaccg 31854519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 38687925 - 38688051
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38687925 tatttacaagagaaagttgactttttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 38688024  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    |||||||  ||||||||||||||||||    
T  38688025 gtaaattgtttcttgtaaataggaccg 38688051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 19485710 - 19485582
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||    
T  19485710 gtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtattta 19485611  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||||  ||||||||||||||||    
T  19485610 aaaagtaaattgtttcttgtaaataggac 19485582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 47949076 - 47948949
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  47949076 tcctaattataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 47948977  T
Q  227 aaagtaaattaattcttgtaaataggac 254  Q
    ||||||||||   |||||||| ||||||    
T  47948976 aaagtaaattgtctcttgtaagtaggac 47948949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 39877541 - 39877411
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  39877541 gtcctatttacaagagaaagttgactttttaggtacattgaataatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatcta 39877442  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||   ||||||||||||||||||    
T  39877441 aaaagtaaatcgtttcttgtaaataggaccg 39877411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 18430250 - 18430397
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgatt--ttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaat 210  Q
    |||||| ||||| |||||||||| |||| |||||||| |  ||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  18430250 aatactccctctggtcctatttacaagagaaagttgactctttttaaatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaat 18430349  T
Q  211 tatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||    
T  18430350 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaa 18430397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 22453642 - 22453534
Alignment:
Q  8 gtattggtccagattggaccaagatttctaaccattagattatacaagtttatagatcctataatacattcaccacactacattttaattagttatacta 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  22453642 gtattggtccagattggaccaagatttatgaccattagattatacaagtttatagatcctataatgcattcaccacgctacattttaattagttctacta 22453543  T
Q  108 gttagaata 116  Q
    |||||||||    
T  22453542 gttagaata 22453534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 55292109 - 55292249
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||||||||  |||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||    
T  55292109 aatacttcctccggtcctatttacaagagaaatttgactttttagatacattgaataatgtatatatctagtcgagaacctaaatcaaatacataaatta 55292208  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    ||||||||||||||||| ||||||  |||||||||||||||    
T  55292209 tttaatgtatctaaaaaataaattgtttcttgtaaatagga 55292249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 128 - 255
Target Start/End: Complemental strand, 2279660 - 2279533
Alignment:
Q  128 cctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaa 227  Q
    |||||||| |||| |||||||| |||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  2279660 cctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatctaaa 2279561  T
Q  228 aagtaaattaattcttgtaaataggacc 255  Q
    |||||||||   ||||||||||||||||    
T  2279560 aagtaaattgtctcttgtaaataggacc 2279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 4758774 - 4758917
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||||    
T  4758774 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaatcaaatacataaatta 4758873  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  4758874 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 4758917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 35329077 - 35328947
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||| |||| |||| |||| | | |||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35329077 gtcctgtttacaagagaaaggtcactttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 35328978  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||| || |||||||||||||||    
T  35328977 aaaagtaaattattttttgtaaataggaccg 35328947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 126 - 255
Target Start/End: Original strand, 2385205 - 2385334
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||||    
T  2385205 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatttaatgtatcta 2385304  T
Q  226 aaaagtaaattaattcttgtaaataggacc 255  Q
    |||| ||||||   ||||||||||||||||    
T  2385305 aaaattaaattgtctcttgtaaataggacc 2385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 53621338 - 53621468
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||| ||||||||||    
T  53621338 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatgaagaacctaaaccaaatacataaattattcaatgtatcta 53621437  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  53621438 aaaagtaaattgtctcttgtaaataggaccg 53621468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 18135310 - 18135453
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgatt--ttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||| ||||| |||||||||| |||| |||||||| |  ||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  18135310 tactccctctggtcctatttacaagagaaagttgactctttttaaatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatta 18135409  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||||||||||||||||||||   |||||||||||||||||    
T  18135410 ttcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 18135453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 2411856 - 2411978
Alignment:
Q  132 tttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagt 231  Q
    ||||||||| |||| | | |||||| |||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  2411856 tttataagagaaagatcactttttaaatacattgaataatgtatgtatctagtcaagaatctaaactaaatacataaattatttaatgtatctaaaaagt 2411955  T
Q  232 aaattaattcttgtaaataggac 254  Q
    |||||  ||||||||||||||||    
T  2411956 aaattgtttcttgtaaataggac 2411978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 6246746 - 6246616
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||||||||||| |||||| ||| ||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  6246746 gtcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggtcaagaacctaaaccaaatacataaattatttaatgtatcta 6246647  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||| ||||    
T  6246646 aaaagtaaattgtctcttgtaaatagaaccg 6246616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 580422 - 580551
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| |||| ||| |||| ||||||||||| ||||||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  580422 tcctatttacaagagaaaattgactttttagatacgttgaataatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaatgtatctaa 580521  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||| ||||||   |||||||||||||||||    
T  580522 aaaataaattgtctcttgtaaataggaccg 580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 56216368 - 56216247
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||| ||||| | | ||||||||||||||||||||||||||||||||||    
T  56216368 tatttataagagaaagttgactttttagatacattgaataatgtatgtatttagttaagaatccaaaccaaatacataaattatttaatgtatctaaaaa 56216269  T
Q  230 gtaaattaattcttgtaaatag 251  Q
    |||||||   ||||||||||||    
T  56216268 gtaaattgtctcttgtaaatag 56216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 21221255 - 21221128
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  21221255 gtcctgtttataagagaaagatcactttttagatacattgaataatatatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatcta 21221156  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||||  || |||||||||||||    
T  21221155 aaaagtaaatt-gtttttgtaaataggac 21221128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 250
Target Start/End: Complemental strand, 38046744 - 38046624
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||| |||||||||||||||||||| || ||||| ||||    
T  38046744 tatttataagataaagttgattttttagatacattgaataatgtatgtatttagtcaaaaatctaaaccaaatacataaattattttatatatctgaaaa 38046645  T
Q  230 gtaaattaattcttgtaaata 250  Q
     |||||||  |||||||||||    
T  38046644 ataaattatctcttgtaaata 38046624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 44199985 - 44200112
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| |||| |||||||||||||| |||| |||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||| |||||||||||    
T  44199985 ctatttacaagagaaagttgatttttttgatatattgaataatgtatatatctagtcaggaatctaaaccaaatacataaattatttagtgtatctaaaa 44200084  T
Q  229 agtaaattaattcttgtaaataggaccg 256  Q
    ||||||||   ||||||||||| |||||    
T  44200085 agtaaattgtctcttgtaaataagaccg 44200112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 52535965 - 52536091
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||| |||||||| || |||||| | ||||||||||||||||||||||||| ||||||    
T  52535965 tatttataagaaaaagttaactttttagatacattgaataatgtatgtatctagttaaaaacctaaatcaaatacataaattatttaatgtatataaaaa 52536064  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    || ||||   |||||||||||||||||    
T  52536065 gttaattgtatcttgtaaataggaccg 52536091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 22453535 - 22453447
Alignment:
Q  264 taattttttatttctctttctctctcctttaggaaatttattgctggaa--cccttctcctcctccactttctccctccatccttcttg 350  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  22453535 taattttttatttccctttctctctcctttaggaaatttattgctggaaaccccttctcctcctccactttctccctccatccttcttg 22453447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 20688567 - 20688455
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  20688567 aatactacctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 20688468  T
Q  213 tttaatgtatcta 225  Q
    || ||||||||||    
T  20688467 ttcaatgtatcta 20688455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 21229355 - 21229239
Alignment:
Q  134 tataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaa 233  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| ||||   |||    
T  21229355 tataagataaagatcattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatttaaatgataa 21229256  T
Q  234 attaattcttgtaaata 250  Q
    |||  ||||||||||||    
T  21229255 attgtttcttgtaaata 21229239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 49122534 - 49122660
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| |||| | |||||| |||||||| |||||||||||||||| |||||||| ||||||||| |||||||| |||||||||| |||||||||||||    
T  49122534 ctatttacaagagacagttgactttttaga-acattgaataatgtatgtatctagttaagaacctaaaccaaatatataaattattcaatgtatctaaaa 49122632  T
Q  229 agtaaattaattcttgtaaataggaccg 256  Q
    ||||||||   |||||||||||||||||    
T  49122633 agtaaattgtctcttgtaaataggaccg 49122660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 265
Target Start/End: Complemental strand, 51833123 - 51833011
Alignment:
Q  153 tttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaatagg 252  Q
    |||||||||| |||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||   |||||||||||||    
T  51833123 tttagatacaatgaataatgtatatatttattcaagaacctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaatagg 51833024  T
Q  253 accgaatgaagta 265  Q
    |||| ||| ||||    
T  51833023 accggatggagta 51833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 53303871 - 53303735
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| |||| ||| | | |||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  53303871 ctatttacaagagaaaatggtttttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaattatttagtgtatctaaaa 53303772  T
Q  229 agtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    | ||||||    |||||||||||||||| ||| ||||    
T  53303771 aataaattgtcacttgtaaataggaccggatggagta 53303735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 152 - 255
Target Start/End: Original strand, 7350242 - 7350345
Alignment:
Q  152 ttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaatag 251  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||     
T  7350242 ttttaaatatattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatat 7350341  T
Q  252 gacc 255  Q
    ||||    
T  7350342 gacc 7350345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 39834392 - 39834282
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| || ||||| ||||||||||||||||||||||||| ||||||   ||||||    
T  39834392 ttgattttttaaatacattgaataatgtatgtatctaatcaagaacctaaacaaaatatataaattatttaatgtatctaaaaaataaattgtctcttgt 39834293  T
Q  246 aaataggaccg 256  Q
    ||||| |||||    
T  39834292 aaataagaccg 39834282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 3085883 - 3086012
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||  | | |||||||| |||||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||||||||||||    
T  3085883 gtcctatttacaagagaaaaataactttttaga-acattgaataatgtatgtatttagtcaataacataaaccaaatacataaattatttaatgtatcta 3085981  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| ||||||   |||||||||||||||||    
T  3085982 aaaaataaattgtctcttgtaaataggaccg 3086012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 32517780 - 32517892
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacat-aaattatttaatgtat-c 223  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||| ||| |    
T  32517780 gtcctatttataagagaaagttgactttttagatacattgaataatatatgtatctagtcaagaatctaaatcaaatacataaaattatttaatatatac 32517879  T
Q  224 taaaaagtaaatt 236  Q
    |||||| ||||||    
T  32517880 taaaaaataaatt 32517892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 15170880 - 15171017
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| ||| |||| |||||| |||||||||||||| ||| || ||| |||||||| || | |||||||||||||||    
T  15170880 aatactccctccggtcttatttacaagagaaaattgactttttaaatacattgaataatatatgtaactaatcaagaacataaatcaaatacataaatta 15170979  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    || |||||||||||||||||||||  || |||||||||    
T  15170980 ttcaatgtatctaaaaagtaaattgttttttgtaaata 15171017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 29833275 - 29833366
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaa 217  Q
    |||||||||| |||||||| |||| ||||||||||||||||| ||| ||| ||| |||||||||||||| | ||||||||||||||||||||    
T  29833275 gtcctatttacaagataaaattgactttttagatacattgaagaatatatgtatttagtcaagaacctaaatcaaatacataaattatttaa 29833366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 4698741 - 4698634
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    |||||||||||||||||||||||||| ||| ||| | ||| |||| ||| |||| |||||||||||||| |||||||||||||| | ||||  |||||||    
T  4698741 ttgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaaaaattcaattgtttcttgt 4698642  T
Q  246 aaatagga 253  Q
    ||| ||||    
T  4698641 aaaaagga 4698634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 27006586 - 27006515
Alignment:
Q  183 gtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    |||||||| ||| | |||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  27006586 gtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 27006515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 4698620 - 4698760
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| |||||  |||| |||| |||| | | |||| ||||||||||||||||||||| ||| ||||| ||  |||  ||| |||| ||||||||||||    
T  4698620 aatactccctctgatcctttttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaatta 4698719  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    || |||||||||||||| | ||||  || ||||||||||||    
T  4698720 ttcaatgtatctaaaaaatcaattgtttattgtaaatagga 4698760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 7350184 - 7350242
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  7350184 aatacttcctctggtcctatttataagagaaagttgacattttagatacattgaataat 7350242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 54612098 - 54612002
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||| ||| ||| |||         |||||||||||||||||||||||||||||||||    
T  54612098 tatttataagagaaagttgaccttttaaatacattgaataatgtatgtatttag-caa---------ccaaatacataaattatttaatgtatctaaaaa 54612009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 30191893 - 30192036
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| | ||||||||||||||||||| ||| |||||||||||||| |||||| ||||  || ||| | ||| ||||  || ||||||||||| | |||    
T  30191893 aatactccgtctagtcctatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcattta 30191992  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |  |||| ||| ||||||| || |  ||||| |||||| |||||    
T  30191993 tgcaatgaatcaaaaaagttaaatgtttcttataaatacgaccg 30192036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 2643670 - 2643612
Alignment:
Q  202 tacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatg 260  Q
    ||||||||||||| |||| | ||||||||| ||||| ||||| ||||||||||||||||    
T  2643670 tacataaattattcaatgaaactaaaaagtcaattatttcttataaataggaccgaatg 2643612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 43413584 - 43413681
Alignment:
Q  158 atacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  ||| |||||||||| | ||||  ||||||||||||| ||||    
T  43413584 atacattgaataatgtatgtatgtagtcatgaatctaaaccagatacataaa-tatccaatatatctaaaaaatcaattgtttcttgtaaatagaaccg 43413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 31227356 - 31227413
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||| ||||||||||||||||||||||| || |   |||||||||||||||||||    
T  31227356 atacatacattatttaatgtatctaaaaagtcaactttctcttgtaaataggaccgaa 31227413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 51194674 - 51194735
Alignment:
Q  8 gtattggtccagattggaccaagatttctaaccattagattatacaagtttatagatcctat 69  Q
    ||||||||||| | ||||||||||||||| |||||||| ||  |||| ||||||||||||||    
T  51194674 gtattggtccatactggaccaagatttcttaccattagcttgaacaaatttatagatcctat 51194735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 255
Target Start/End: Complemental strand, 55190804 - 55190676
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||| ||||||||||| || |||| ||||||  || ||||||| | ||||  || ||||||||||| ||||||  | || ||| |    
T  55190804 gtcctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaa-atagaccaaatacatcaattatccactgaatcaa 55190706  T
Q  226 aaaagtaaattaattcttgtaaataggacc 255  Q
    |||||||||||  ||||| || ||||||||    
T  55190705 aaaagtaaattgtttcttatatataggacc 55190676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 6246688 - 6246748
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||| |||||| |||||||||||||||| || |   |||||||||||||||||    
T  6246688 accaaatacatatattattgaatgtatctaaaaagtcaactttctcttgtaaataggaccg 6246748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 21554245 - 21554201
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||    
T  21554245 tcctatttataagaaaaagttgattttttagattcattgagtaat 21554201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 53225724 - 53225784
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||  ||||| ||||||||||||    
T  53225724 accaaatacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccg 53225784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 14785084 - 14785009
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagtaattttt 271  Q
    |||| |||| ||||||||| ||||||||| |||||| ||||| ||| ||||||||||| || | |||||| |||||    
T  14785084 accatatacttaaattattcaatgtatctgaaaagtcaattatttcctgtaaataggatcggaggaagtatttttt 14785009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 3043802 - 3043911
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||  || || |||||| | ||  || ||||||||||| || |||| |||| ||| |    
T  3043802 gtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtcta-aaaatagaccaaatacatcaactattcaatgaatcaa 3043900  T
Q  226 aaaagtaaatt 236  Q
    |||| ||||||    
T  3043901 aaaaataaatt 3043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 20745469 - 20745360
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||  || || |||| | ||||  || | ||||||||| || |||| |||| ||| |    
T  20745469 gtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatcaactattcaatgaatcaa 20745371  T
Q  226 aaaagtaaatt 236  Q
    |||||||||||    
T  20745370 aaaagtaaatt 20745360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 31240876 - 31240974
Alignment:
Q  150 ttttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaa 248  Q
    |||||||||||  ||||||||| ||| ||||| ||  | || ||| || |||||||||| ||||| ||||||| |||||||| ||||  ||||||||||    
T  31240876 ttttttagatattttgaataatttatgtatctggtttaaaatctaaactaaatacataatttattcaatgtatttaaaaagttaattgtttcttgtaaa 31240974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 29833330 - 29833273
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||| ||| || |||||||||||||||| ||||   |||||||||||||||||    
T  29833330 aaatacatatattcttcaatgtatctaaaaagtcaattttatcttgtaaataggaccg 29833273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 29834554 - 29834598
Alignment:
Q  209 attatttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  29834554 attatttaatgtatctagaaagtaaatt-tttcttgtaaataggac 29834598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 45828553 - 45828508
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||||||||||||| ||| |||||||||||||| |||||| ||||    
T  45828553 gtcctatttataagaaaaaattgattttttagattcattgagtaat 45828508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 48361049 - 48361190
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||||||||||||||| ||| |||| ||||||||| |||||| ||||  || ||| | ||| ||||  || ||||||||||| | |||    
T  48361049 aatactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcattta 48361148  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    |  |||| ||| ||||||| || |  ||||| ||||||||||    
T  48361149 tgcaatgaatcaaaaaagtcaaatgtttcttataaataggac 48361190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 53225782 - 53225737
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  53225782 gtcctatttataagaaaaaattgactttttagattcattgaataat 53225737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 16412233 - 16412289
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||  || |||||||||||| ||| |||| ||||||||| |||||||||||    
T  16412233 tacttcctccggttctatttataagaaaaaattgactttttagattcattgaataat 16412289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 31854442 - 31854378
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||| |||||| |||||||||||||||| || |   |||||||| |||||||| ||||||||    
T  31854442 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaattaggaccggatgaagta 31854378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 55466115 - 55466147
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagt 231  Q
    |||||||||||||||||||| ||||||||||||    
T  55466115 aaatacataaattatttaatatatctaaaaagt 55466147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 265
Target Start/End: Complemental strand, 41989703 - 41989563
Alignment:
Q  125 agtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct 224  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  41989703 agtcctatttaaaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 41989604  T
Q  225 aaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||||||||   ||||||||||||||||| | ||||||    
T  41989603 aaaaagtaaattgtctcttgtaaataggaccggaggaagta 41989563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 13145031 - 13144888
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  13145031 aatactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 13144932  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  13144931 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 13144888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 31802968 - 31803098
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  31802968 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatatatctagtcaataacctaaaccaaatacataaattatttaatgtatcta 31803067  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  ||||||||||||||||||    
T  31803068 aaaagtaaattgtttcttgtaaataggaccg 31803098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 18353205 - 18353345
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  18353205 aatactccctcatgtcctatttacaagagaaagttgattttttacatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaatta 18353304  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  18353305 tttaatgtatctaaaaagtaaattgtttcttgtaaatagga 18353345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 36418982 - 36419127
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  36418982 aatactccctccggtcctatttacaagataaagttgatttttttgatacattgaataatgtatgtatctagtcaagaacctaaactaaatacataaatta 36419081  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||| ||||||||||||||||||||   ||||||||||||| |||||    
T  36419082 ttttatgtatctaaaaagtaaattgtctcttgtaaataggtccgaa 36419127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 37699790 - 37699939
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  37699790 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 37699889  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagtaattttttatt 275  Q
    |||||||||||   ||||||||||||||||| ||| ||||  ||||||||    
T  37699890 aaaagtaaattgtctcttgtaaataggaccggatgtagtatctttttatt 37699939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 20578653 - 20578804
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||| ||||| || |||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||    
T  20578653 atactccctctggttctatttataagagaaagttgactttttagatacattgaataatatatctatctagtcaataacctaaaccaaatacataaattat 20578752  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||||| |||||||||||||   | ||||||||||||||||| ||||||    
T  20578753 ttaatgtatataaaaagtaaattgtctattgtaaataggaccgaaggaagta 20578804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 25027845 - 25027702
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  25027845 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaatta 25027746  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||||||||||||||||||||   |||||||||||||||||    
T  25027745 ttcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 25027702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 7750056 - 7749926
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7750056 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatcta 7749957  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| ||||||   |||||||||||||||||    
T  7749956 aaaattaaattgtctcttgtaaataggaccg 7749926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 41046962 - 41046836
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  41046962 tatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 41046863  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    ||| |||   |||||||||||||||||    
T  41046862 gtagattgtctcttgtaaataggaccg 41046836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 21610312 - 21610441
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||    
T  21610312 tcctatttacaagataaagttaactttttagatacattgaataatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatataa 21610411  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||||| ||||  ||||||||||||||||||    
T  21610412 aaagttaattgtttcttgtaaataggaccg 21610441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 15569344 - 15569480
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  15569344 ctatttacaagagaaagttgactttttagatacattgaataatgtatatatctaatcaagaacataaaccaaatacataaattatttaatgtatctaaaa 15569443  T
Q  229 agtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||||||   ||||||||||||||||| | ||||||    
T  15569444 agtaaattgtctcttgtaaataggaccggaggaagta 15569480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 6338326 - 6338453
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6338326 tcctatttataagaggaagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatctaa 6338425  T
Q  227 aaagtaaattaattcttgtaaataggac 254  Q
    ||||||||||   | |||||||||||||    
T  6338426 aaagtaaattgtcttttgtaaataggac 6338453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 903976 - 904106
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||||||| |||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  903976 gtcctatttacaagagaaagttgactttttagatatattgaataatgtgtgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 904075  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  || |||||||||| ||||    
T  904076 aaaagtaaattgtttattgtaaatagaaccg 904106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 1108421 - 1108291
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||  ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||    
T  1108421 gtcctatttacgagataaagttgatcttttagatgcattgaataatgtatgtatctagtcaagaacctaaactaaatacataaattattttatgtatcta 1108322  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  1108321 aaaagtaaattgtctcttgtaaataggaccg 1108291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 9601603 - 9601733
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||| |||||||||    
T  9601603 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccaaatacataaattatttgatgtatcta 9601702  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  9601703 aaaagtaaattgtctcttgtaaataggaccg 9601733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 36417044 - 36417186
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| ||| |||| |||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  36417044 aatactccctccggtcctatttacaagagaaatttgactttttaaatacattgaataatgtatgtatctagtcaagaacctaatccaaatacataaatta 36417143  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggacc 255  Q
    ||||||||||||||||||||||||  ||||| |||||||||||    
T  36417144 tttaatgtatctaaaaagtaaattgtttcttataaataggacc 36417186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 26898342 - 26898201
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| |||||||| ||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  26898342 aatactccctccggtcctatttacaagagaaagttgactttttagatgcattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 26898243  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||| |||||||||||||   |||||||||||||||    
T  26898242 tttaatgtatttaaaaagtaaattgtctcttgtaaataggac 26898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 16089097 - 16089249
Alignment:
Q  127 tcctatttataagataaagttgatttttt-agatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct- 224  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||     
T  16089097 tcctatttataagataaagttgatttttttaggtacattgaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatatatcta 16089196  T
Q  225 aaaaagtaaattaattcttgtaaataggaccgaatgaagtaattttttatttc 277  Q
    ||||| ||||||   |||||||||||||||||||  ||||| |||| ||||||    
T  16089197 aaaaaataaattgtctcttgtaaataggaccgaaaaaagtacttttctatttc 16089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 29374321 - 29374181
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  29374321 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctcgtcaagaacctaaaccaaatacataaatta 29374222  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    || |||||||||||||||||||||   ||||||||||||||    
T  29374221 ttcaatgtatctaaaaagtaaattgtctcttgtaaatagga 29374181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 7945950 - 7945845
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  7945950 tttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatatataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 7945851  T
Q  251 ggaccg 256  Q
    ||||||    
T  7945850 ggaccg 7945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 23411316 - 23411196
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  23411316 aatactccctccggtcttatttacaagagaaaattgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaatta 23411217  T
Q  213 tttaatgtatctaaaaagtaa 233  Q
    |||||||||||||||||||||    
T  23411216 tttaatgtatctaaaaagtaa 23411196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 2959249 - 2959388
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||  || | |||||||||| |||||||||||||||||    
T  2959249 gtcctatttacaagagaaaattgactttttagatacattgaagaatgtatatatctagtcaagaatttaaatcaaatacatatattatttaatgtatcta 2959348  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||  |||||||||||||||||| ||| ||||    
T  2959349 aaaagtaaattgtttcttgtaaataggaccggatggagta 2959388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 2967718 - 2967857
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||  || | |||||||||| |||||||||||||||||    
T  2967718 gtcctatttacaagagaaaattgactttttagatacattgaagaatgtatatatctagtcaagaatttaaatcaaatacatatattatttaatgtatcta 2967817  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||  |||||||||||||||||| ||| ||||    
T  2967818 aaaagtaaattgtttcttgtaaataggaccggatggagta 2967857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 7053798 - 7053656
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| || ||||| |||||| |||||||||||||||||| ||||||||||||| |||| | |||||||||||||||    
T  7053798 aatactccctccggtcctatttacaagagaa-gttgactttttaaatacattgaataatgtatgtatctagtcaagagcctaaatcaaatacataaatta 7053700  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  7053699 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 7053656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 41815323 - 41815196
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||  ||| |||||||||||||  ||||||||||||||||||||||||||| ||    
T  41815323 gtcctatttacaagagaaagttgactttttagatacattgaataatgtacgtatttagtcaagaacctgaaccaaatacataaattatttaatgtattta 41815224  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||||||||  || ||||||||||||    
T  41815223 aaaagtaaattgtttattgtaaatagga 41815196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 1643495 - 1643352
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||||||||||||||| | |||||| |||||||||||||| |||||||||| |||||||||||||| ||| | ||||||||||||||     
T  1643495 aatactccctccggtcctatttataagagacagttgactttttagatacattcaataatgtatgtatctagtcaagaatctaaatcaaatacataaattt 1643396  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||||||||||||||||||||   | |||||||||||||||    
T  1643395 ttcaatgtatctaaaaagtaaattgtctattgtaaataggaccg 1643352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 2825997 - 2825895
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  2825997 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatctaa 2825898  T
Q  227 aaa 229  Q
    |||    
T  2825897 aaa 2825895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 42311820 - 42311947
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| |||||| |||||||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||||||||||||    
T  42311820 gtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtatttagtcaaaaacttaaaccaaatacataaattatttaatgtatcta 42311919  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||| ||||||   ||||||||||||||    
T  42311920 aaaaataaattgtctcttgtaaatagga 42311947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 21090386 - 21090496
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| || | ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||| ||    
T  21090386 gtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacatacattatttaatgtattta 21090485  T
Q  226 aaaagtaaatt 236  Q
    |||||||||||    
T  21090486 aaaagtaaatt 21090496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 6910834 - 6910726
Alignment:
Q  142 aaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattc 241  Q
    |||||||| |||||||||| ||||||||||||||  ||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||  |||    
T  6910834 aaagttgactttttagatatattgaataatgtatgcatctagtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaaataaattgtttc 6910735  T
Q  242 ttgtaaata 250  Q
    |||||||||    
T  6910734 ttgtaaata 6910726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 14338928 - 14338824
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    ||||||||||||||||||||| ||| |||||| |||||||  || ||||||||||||||||||||||| |||||||||| | ||||   |||||||||||    
T  14338928 tttttagatacattgaataatttatgtatctattcaagaatttaaaccaaatacataaattatttaatttatctaaaaaattaattgtctcttgtaaata 14338829  T
Q  251 ggacc 255  Q
     ||||    
T  14338828 agacc 14338824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 38393788 - 38393904
Alignment:
Q  149 attttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaa 248  Q
    |||||| | |||||||||||||| ||| ||| |||||||||| ||| | ||||| ||||||||||| ||| ||| |||||||| ||||  ||||||||||    
T  38393788 atttttaaaatacattgaataatttatgtatatagtcaagaatctaaatcaaattcataaattattcaatatatttaaaaagtcaattgtttcttgtaaa 38393887  T
Q  249 taggaccgaatgaagta 265  Q
    ||| |||| | ||||||    
T  38393888 tagaaccggaggaagta 38393904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 255
Target Start/End: Original strand, 15968321 - 15968449
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||  || ||||||| | ||||  || ||||||||||| || |||| |||| ||| |    
T  15968321 gtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactattcaatgaatcaa 15968419  T
Q  226 aaaagtaaattaattcttgtaaataggacc 255  Q
    |||||||||||  ||||| || ||||||||    
T  15968420 aaaagtaaattgtttcttatatataggacc 15968449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 1138351 - 1138226
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| ||| ||||||||||| || |||| ||||||  || ||||||| | ||||  || ||||||||||| ||||||| |||  ||| |||||    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaaa-tagaccaaatacattaattattcaataaatcaaaaaa 1138253  T
Q  230 gtaaattaattcttgtaaataggaccg 256  Q
    |||||||  ||||| ||||||||||||    
T  1138252 gtaaattgtttcttataaataggaccg 1138226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 22731396 - 22731267
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| |||| ||| |    
T  22731396 gtcctatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaa 22731298  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  ||||| || |||||||||    
T  22731297 aaaagtaaattgtttcttatatataggaccg 22731267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 27488357 - 27488486
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||| || ||||||||||| |||| ||||||  || ||||||| | ||||  || |||||||| || || |||| |||| ||| |    
T  27488357 gtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactattgaatgaatcaa 27488455  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  ||||| || |||||||||    
T  27488456 aaaagtaaattgtttcttatatataggaccg 27488486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 42311875 - 42311818
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||| |||||| ||||||| |||||||| ||||  ||||||||||||||||||    
T  42311875 aaatacatacattattcaatgtatttaaaaagtcaattttttcttgtaaataggaccg 42311818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 21090439 - 21090384
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||||    
T  21090439 atacatacattattcaatgtatctaaaaagttaattttctcttgtaaataggaccg 21090384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 7272270 - 7272241
Alignment:
Q  200 aatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||||||||||||||||||||||    
T  7272270 aatacataaattatttaatgtatctaaaaa 7272241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 7750003 - 7750060
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||| |||||| |||||||||||||||| || |   |||||||||||||||||||    
T  7750003 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccgaa 7750060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 2825945 - 2825997
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    ||||||| |||||| |||||||||||||||| ||||   ||||||||||||||    
T  2825945 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatagga 2825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 29299367 - 29299407
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattga 166  Q
    ||||||||||||||| ||| |||||||||||||| ||||||    
T  29299367 gtcctatttataagaaaaatttgattttttagattcattga 29299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 38394439 - 38394483
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| ||| |||| ||||||||| |||||||||||    
T  38394439 tcctatttataagaaaaaattgactttttagattcattgaataat 38394483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 8e-49; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 14768236 - 14768106
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14768236 gtcctatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 14768137  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  14768136 aaaagtaaattgtctcttgtaaataggaccg 14768106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 18765256 - 18765398
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||  ||| |||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  18765256 atacttcctccggtcatatttacaagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattat 18765355  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| ||||||||||||||||  ||||||||||||||||||    
T  18765356 ttaatgcatctaaaaagtaaattgtttcttgtaaataggaccg 18765398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 335386 - 335515
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  335386 tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 335485  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||  || |||||||||||||||    
T  335486 aaagtaaattgttttttgtaaataggaccg 335515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 42605824 - 42605967
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||    
T  42605824 aatactccctccagtcctatttacaagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacttaaactaaatacataaatta 42605923  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||| ||||||||||||||||||||   |||||||| ||||||||    
T  42605924 ttttatgtatctaaaaagtaaattgtctcttgtaagtaggaccg 42605967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 9465081 - 9465211
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||    
T  9465081 gtcctatttacaagataaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattattttatgtatcta 9465180  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  9465181 aaaagtaaattgtctcttgtaaataggaccg 9465211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 19202260 - 19202390
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19202260 gtcctatttacaagagaaagttgactttttagatacattgaataaggtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 19202359  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  || |||||||||||||||    
T  19202360 aaaagtaaattgttttttgtaaataggaccg 19202390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 25846521 - 25846651
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  25846521 gtcctatttataaaagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtattta 25846620  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  25846621 aaaagtaaattgtctcttgtaaataggaccg 25846651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 40464660 - 40464550
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  40464660 gtcctatttataagataaagttgattttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatttatcta 40464561  T
Q  226 aaaagtaaatt 236  Q
    |||||||||||    
T  40464560 aaaagtaaatt 40464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 49123082 - 49122952
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  49123082 gtcctatttataggataaatttgactttttagatacattgaataatgtatgtatctagtcaagagcctaaaccaaatacataaattatttaatgtatcta 49122983  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  49122982 aaaagtaaattgtctcttgtaaataggaccg 49122952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 25113348 - 25113489
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  25113348 tacttcctccggtcctatttataagagaaagttgactttttagatacattgaataatgtatgtatttaatcaagaacctaaaccaaatacataaattatt 25113447  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||| ||||||||||||   |||||||||||||||||    
T  25113448 taatgtatcgaaaaagtaaattgtctcttgtaaataggaccg 25113489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 21653354 - 21653482
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21653354 gtcctatttacaagagaaatttgattttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatgcataaattatttaatgtatcta 21653453  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    |||||||||||   |||||||||||||||    
T  21653454 aaaagtaaattgtctcttgtaaataggac 21653482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 26999172 - 26999029
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | | |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26999172 aatactccctccggtcctatttacaagagacatttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 26999073  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||||||||||||    
T  26999072 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 26999029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 6086911 - 6087041
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6086911 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 6087010  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  6087011 aaaagtaaattgtctcttgtaaataggaccg 6087041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 271
Target Start/End: Original strand, 9440138 - 9440283
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  9440138 gtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatcta 9440237  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagtaattttt 271  Q
    |||||||||||   ||||||||||||||||| | | ||||||||||    
T  9440238 aaaagtaaattgtctcttgtaaataggaccggaggtagtaattttt 9440283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 52114045 - 52114162
Alignment:
Q  137 aagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaatt 236  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52114045 aagagaaagttgattttttagatacattgaataatgtatgtatctagtaaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 52114144  T
Q  237 aattcttgtaaataggac 254  Q
       |||||||||||||||    
T  52114145 gtctcttgtaaataggac 52114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 23825283 - 23825160
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  23825283 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttgatgtatctaaaaa 23825184  T
Q  230 gtaaattaattcttgtaaatagga 253  Q
    |||||||  |||||||||||||||    
T  23825183 gtaaattgtttcttgtaaatagga 23825160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 29019874 - 29019743
Alignment:
Q  125 agtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct 224  Q
    ||||||||||| |||| ||| |||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  29019874 agtcctatttacaagagaaaattgactttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 29019775  T
Q  225 aaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| |||||||   |||||||||||||||||    
T  29019774 aaaatgtaaattgtctcttgtaaataggaccg 29019743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 47450054 - 47449927
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| || | |||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47450054 gtcctatttacaatagaaagttgagtttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 47449955  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||||||||   ||||||||||||||    
T  47449954 aaaagtaaattgtctcttgtaaatagga 47449927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 10049806 - 10049676
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | | |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  10049806 gtcctatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 10049707  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  10049706 aaaagtaaattgtctcttgtaaataggaccg 10049676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 265
Target Start/End: Complemental strand, 9190165 - 9190027
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||| |    
T  9190165 tcctatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatttaaaccaaatacataaattatttaatgtatctta 9190066  T
Q  227 aaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||    ||||||||||| || |||| ||||||    
T  9190065 aaagtaaatcgtctcttgtaaatatgatcgaaggaagta 9190027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 28564945 - 28565077
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| |||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  28564945 gtcctatttacaagagaaaattgactttttatatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgcatcta 28565044  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaa 258  Q
    |||| ||||||   |||||||||||||||||||    
T  28565045 aaaaataaattgtctcttgtaaataggaccgaa 28565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 51698111 - 51698251
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| |||||||| |||||||||||||| |||||||||| |||||||| | |||| || |||||||||||||||||    
T  51698111 aatactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtaatgaacataaaccaaatacataaatta 51698210  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaatagga 253  Q
    ||||||||||||||||||||||||   ||||||||||||||    
T  51698211 tttaatgtatctaaaaagtaaattgtctcttgtaaatagga 51698251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 8243679 - 8243822
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||||| ||  ||| |||||| |||| | | |||| ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  8243679 aatacttcatccggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaatta 8243778  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    || |||||||||||||||||||||   |||||||||||||||||    
T  8243779 ttcaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 8243822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 28945794 - 28945664
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| |||||||||| ||| |||||||||| | |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  28945794 gtcctatttacaagagaaaattgactttttagatatattcaataatgtatgtttctagttaagaacctaaaccaaatacataaattatttaatgtatcta 28945695  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  28945694 aaaagtaaattgtctcttgtaaataggaccg 28945664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 40214910 - 40215040
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||| ||||||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  40214910 gtcctatttacaagagaaagttgactttttagatacattggataatgtatgtatctagtcaagaatctaaatcaaatacataaattatttaatgtatcta 40215009  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||| ||   |||| ||||||||||||    
T  40215010 aaaagtaacttgtctcttataaataggaccg 40215040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 379211 - 379078
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaag---aacctacaccaaatacataaattatttaatgtat 222  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||||   || ||| |||||||||||||||||||||||||||    
T  379211 gtcctatttataagagaaagttgactttttagatacattgaataatttatgtatctagtcaagatcaatctaaaccaaatacataaattatttaatgtat 379112  T
Q  223 ctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| | ||||   |||||||||||||||||    
T  379111 ctaaaaaattaattgtctcttgtaaataggaccg 379078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 42225572 - 42225702
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||| ||||| |||| ||| || ||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| |    
T  42225572 gtcccatttacaagaaaaaattaattttttagatacattgaataatgtatgtatctagtcaataacctaaactaaatacataaattatttaatgtatcaa 42225671  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||  || ||||||||| |||||    
T  42225672 aaaagtaaattgttttttgtaaataagaccg 42225702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 13826261 - 13826120
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  || ||||||| |||| |||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| | ||||| |||||||||||    
T  13826261 tacttcctccggttctatttacaagagaaagttgactttttagatacattgaagaatgtatgtatttagtcaagaacctaaatcaaattcataaattatt 13826162  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||  ||||||||||||   ||||||||||||||||||    
T  13826161 taatgtaaataaaaagtaaatcgtttcttgtaaataggaccg 13826120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 1122413 - 1122305
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||||||||||| ||||||| |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  1122413 gtcctatttacaagagaaaattgactttttagatacattgaagaatgtatgtatctagtcaagaacctaaaataaatacataaattatttaatgtatcta 1122314  T
Q  226 aaaagtaaa 234  Q
    |||||||||    
T  1122313 aaaagtaaa 1122305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 44593215 - 44593336
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||| |||| |||||||| |||||| |||||||||||||| ||| |||||| |||| ||| || ||||||||||||||||||||||||||||||||||    
T  44593215 tatttacaagaaaaagttgactttttaaatacattgaataatatatgtatctaatcaaaaacttaaaccaaatacataaattatttaatgtatctaaaaa 44593314  T
Q  230 gtaaattaattcttgtaaatag 251  Q
     ||||||| || ||||||||||    
T  44593315 ttaaattactttttgtaaatag 44593336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 22003945 - 22003794
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  ||||||||||||| | ||| |||| ||||||||||||||||||||| ||| |||||||| ||||| ||| || ||||| ||||||||||    
T  22003945 tacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaattatt 22003846  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaat-aggaccgaatgaagta 265  Q
     |||||||||||||| | ||||   ||||||||||  |||||| ||||||||    
T  22003845 caatgtatctaaaaaattaattgtctcttgtaaatggggaccggatgaagta 22003794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 22011462 - 22011311
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||  ||||||||||||| | ||| |||| ||||||||||||||||||||| ||| |||||||| ||||| ||| || ||||| ||||||||||    
T  22011462 tacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaattatt 22011363  T
Q  215 taatgtatctaaaaagtaaattaattcttgtaaat-aggaccgaatgaagta 265  Q
     |||||||||||||| | ||||   ||||||||||  |||||| ||||||||    
T  22011362 caatgtatctaaaaaattaattgtctcttgtaaatggggaccggatgaagta 22011311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 8825844 - 8825762
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaa 233  Q
    ||||||||| ||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  8825844 tttttagatgcattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatatatctaaaaagtaa 8825762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 40141930 - 40142023
Alignment:
Q  172 gtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||| ||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  40141930 gtatgtatttagtcaagaatttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactgaaggaagta 40142023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 39341382 - 39341512
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattg---aataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtat 222  Q
    |||||||||| |||| ||| |||| ||||||||||||||    |||||||||| |||||||||||||| ||| | |||||| |||||||||||||| |||    
T  39341382 gtcctatttacaagagaaaattgactttttagatacattattaaataatgtatgtatctagtcaagaatctaaatcaaatatataaattatttaatatat 39341481  T
Q  223 ctaaaaagtaaattaattcttgtaaatagga 253  Q
    |||||| ||||  || |||||||||||||||    
T  39341482 ctaaaatgtaacgtatttcttgtaaatagga 39341512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 26123128 - 26123046
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataa 208  Q
    |||||||||| |||| |||| ||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||    
T  26123128 gtcctatttacaagagaaagatgactttttagatacattgaataatgtatgtatctagtcaaaaacctaaaccaaatgcataa 26123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 3484460 - 3484342
Alignment:
Q  132 tttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagt 231  Q
    ||||||| | ||||||||||||||||||| ||||||||||    |||  || ||||||| ||| |||||||||||||| ||||||||||||||||||| |    
T  3484460 tttataaaagaaagttgattttttagatatattgaataat----ttacgtactcaagaatctaaaccaaatacataaactatttaatgtatctaaaaaat 3484365  T
Q  232 aaattaattcttgtaaataggac 254  Q
     ||||   |||||||||||||||    
T  3484364 taattgtctcttgtaaataggac 3484342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 42841635 - 42841700
Alignment:
Q  152 ttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaa 217  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| || |||||||||||||||||||    
T  42841635 ttttagatacattgaataatgtatatatctagttaagaatctaaactaaatacataaattatttaa 42841700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 55139286 - 55139201
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaatt 236  Q
    |||||||||| |||||||||| ||| ||| | ||||||||  || | ||||||||||||||||| |||||||||||||||| ||||    
T  55139286 tttttagatatattgaataatttatgtatttggtcaagaatttaaaacaaatacataaattattcaatgtatctaaaaagtcaatt 55139201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 16660334 - 16660401
Alignment:
Q  170 atgtatttatctagtcaagaacctacaccaaatacataaa--ttatttaatgtatctaaaaagtaaat 235  Q
    |||||| ||| ||||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  16660334 atgtatgtatttagtcaacaacctaaaccaaatacataaattttatttaatgtatctaaaaagtaaat 16660401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 8987762 - 8987844
Alignment:
Q  149 attttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagt 231  Q
    ||||||||||| ||||||||||  ||| ||| | ||| ||||  || ||||||||||||||||||| ||||||||||||||||    
T  8987762 attttttagatgcattgaataacttatgtatttggtctagaatttaaaccaaatacataaattattgaatgtatctaaaaagt 8987844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 22003829 - 22003947
Alignment:
Q  149 attttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaa 248  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||  ||  || | |||||||||||||| |||||||||||||||| ||||   | || ||||    
T  22003829 attttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaagtcaattttctgttataaa 22003928  T
Q  249 taggaccgaatgaagtaat 267  Q
    |||||||| | ||||||||    
T  22003929 taggaccggaggaagtaat 22003947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 22011346 - 22011464
Alignment:
Q  149 attttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaa 248  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||  ||  || | |||||||||||||| |||||||||||||||| ||||   | || ||||    
T  22011346 attttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaagtcaattttctgttataaa 22011445  T
Q  249 taggaccgaatgaagtaat 267  Q
    |||||||| | ||||||||    
T  22011446 taggaccggaggaagtaat 22011464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 28406605 - 28406475
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | | |||| ||||||| | ||||||||||| ||| || |  ||| ||||  || ||||||||||| ||||||| || | |||||    
T  28406605 gtcctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattattcaacgaatcta 28406506  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| ||||  ||||||||||||||||||    
T  28406505 aaaagtcaattgtttcttgtaaataggaccg 28406475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 48593177 - 48593282
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    |||||||||||||||||||||  || ||||  ||| ||||  || ||||||||||||||||||| |||| ||||||||| | | ||  |||||||| |||    
T  48593177 tttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaaattacttgtttcttgtatata 48593276  T
Q  251 ggaccg 256  Q
    ||||||    
T  48593277 ggaccg 48593282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 8243833 - 8243681
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | | || | ||||||||||||||||||||| ||| ||| | ||  |||  ||  || | ||||||| ||||    
T  8243833 aatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacatta 8243734  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    || |||||||||||||||| ||||   ||||||||||| ||||| ||||||||    
T  8243733 ttcaatgtatctaaaaagtcaattgtctcttgtaaataagaccggatgaagta 8243681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 25376318 - 25376390
Alignment:
Q  8 gtattggtccagattggaccaagatttctaaccattagattatacaagtttatagatcctataatacattcac 80  Q
    ||||||||||| | |||||||| ||||||| ||||||||||| ||||| |||||||| |||| || |||||||    
T  25376318 gtattggtccatactggaccaacatttctatccattagattaaacaagcttatagattctatcatgcattcac 25376390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 258
Target Start/End: Original strand, 54537454 - 54537585
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| ||| |||| |||| |||| |||||| ||||  || ||||||||| ||||  || | |||||||| || ||||  |||| ||| ||    
T  54537454 tcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatgaatcaaa 54537553  T
Q  227 aaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||| ||| | ||||| ||||||||||||||    
T  54537554 aaagtcaataatttcttataaataggaccgaa 54537585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 54392283 - 54392226
Alignment:
Q  8 gtattggtccagattggaccaagatttctaaccattagattatacaagtttatagatc 65  Q
    ||||||||||| |||||| |||||||||| ||||||| |||| ||||| |||||||||    
T  54392283 gtattggtccatattggatcaagatttctgaccattaaattacacaagcttatagatc 54392226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 19880917 - 19880869
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaa 247  Q
    |||||||||||||||||||||||||||||| || ||||  |||||||||    
T  19880917 aaatacataaattatttaatgtatctaaaacgtcaattgtttcttgtaa 19880869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 43448969 - 43449013
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||    
T  43448969 tcctatttataagaaaaagttgattttttagattcattgagtaat 43449013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 51723389 - 51723433
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||    
T  51723389 tcctatttataagaaaaagttgattttttagattcattgagtaat 51723433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 10049753 - 10049808
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||||    
T  10049753 atacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaataggaccg 10049808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 21662883 - 21662941
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||| ||||  ||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  21662883 aatactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 21662941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 28406553 - 28406607
Alignment:
Q  202 tacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||| |||| | ||||||||| ||||  ||||||||||||||||||    
T  28406553 tacataaattattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccg 28406607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 53442045 - 53441915
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||| |||||| || |||||||||||  || ||  | ||  ||||  || ||||||||||| | ||||  |||| ||| |    
T  53442045 gtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatgaatcaa 53441946  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||| |  ||||| ||||||||||||    
T  53441945 aaaagtaaaatgtttcttataaataggaccg 53441915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 1122360 - 1122417
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||| ||| || |||||||||||||||| ||||   |||||||||||||||||||    
T  1122360 atacatacattcttcaatgtatctaaaaagtcaattttctcttgtaaataggaccgaa 1122417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 29019820 - 29019873
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||    
T  29019820 atacatatattattcaatgtatctaaaaagtcaattttctcttgtaaataggac 29019873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 29457974 - 29457850
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    |||||||||||| |||||| | ||||||||| |||| ||| ||  || || |||||| ||||  || ||||||||||| || |||| |||| ||| ||||    
T  29457974 ctatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaaa-tagaccaaatacatcaactattcaatgaatcaaaaa 29457876  T
Q  229 agtaaattaattcttgtaaataggac 254  Q
    ||||||||  ||||| || |||||||    
T  29457875 agtaaattgtttcttatatataggac 29457850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 26250524 - 26250568
Alignment:
Q  7 agtattggtccagattggaccaagatttctaaccattagattata 51  Q
    |||||||||||| | |||||||| |||| ||||||||||||||||    
T  26250524 agtattggtccataatggaccaatatttataaccattagattata 26250568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 49885392 - 49885475
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    |||||||||||| ||| || ||||||||||| |||| ||||||  || ||||||||| ||||  || ||||||||||| ||||||    
T  49885392 ctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaa-atagaccaaatacatcaattat 49885475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 272
Target Start/End: Original strand, 5347733 - 5347878
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||     
T  5347733 gtcctatttataagagaaagttgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct- 5347831  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagtaatttttt 272  Q
    |||||||||||   ||||||||||||||||| | | |||||||||||    
T  5347832 aaaagtaaattgtctcttgtaaataggaccggagggagtaatttttt 5347878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 23248678 - 23248808
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  23248678 gtcctatttacaagataaagttgactttttagatacattgaataatatatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 23248777  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  23248778 aaaagtaaattgtctcttgtaaataggaccg 23248808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 12763380 - 12763235
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12763380 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 12763281  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaa 258  Q
    ||||||||||||||||||||||||   |||||||||||||||||||    
T  12763280 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaa 12763235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 274
Target Start/End: Complemental strand, 3411469 - 3411322
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3411469 tcctatttataagagaaatttgactttttagatacattgaataatgtatgtacctagtcaagaacctaaaccaaatacataaattatttaatgtatctaa 3411370  T
Q  227 aaagtaaattaattcttgtaaataggaccgaatgaagtaattttttat 274  Q
    ||||||||||   ||||||||||| ||||| | |||||| | ||||||    
T  3411369 aaagtaaattgtctcttgtaaataagaccggaagaagtattattttat 3411322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 30866396 - 30866253
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  ||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  30866396 aatactccctccggtcttatttacaagagaaagttgattttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 30866297  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||| ||||||||||||    
T  30866296 tttaatgtatctaaaaagtaaattgtctcttttaaataggaccg 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 29770460 - 29770350
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29770460 gtcctatttataagttaaagttgactttttagatacattgaataatgcatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta 29770361  T
Q  226 aaaagtaaatt 236  Q
    |||||||||||    
T  29770360 aaaagtaaatt 29770350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 7463599 - 7463457
Alignment:
Q  115 tacttcctctagtcctatttataagataaagttga-ttttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    |||| ||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||    
T  7463599 tactccctctggtcctatttataagagaaaattgacttttttagatacattgaataatgtatgtatctaatcaagaatctaaaccaaatacataaattat 7463500  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
     |||||||| |||||||||||||  ||||||||||||||||||    
T  7463499 gtaatgtatttaaaaagtaaattgtttcttgtaaataggaccg 7463457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 32050093 - 32050214
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  32050093 ctatttataagagaaaattgattttttagatatattgaataatgtatgtatctactcaagaacctacaccaaatacataaattatttaatatatctaaaa 32050192  T
Q  229 agtaaattaattcttgtaaata 250  Q
    ||||||||   |||||||||||    
T  32050193 agtaaattgtctcttgtaaata 32050214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 19979491 - 19979627
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttga-ttttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    ||||| ||||||||  ||||||||||| |||||| | |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  19979491 atactccctctagttatatttataagagaaagttaacttttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatta 19979590  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaat 249  Q
    ||||||||||||||||||||||||  || ||||||||    
T  19979591 tttaatgtatctaaaaagtaaattgtttattgtaaat 19979627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 34281679 - 34281803
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| |||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  34281679 gtcctatttacaagagaaagttgactttttacatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 34281778  T
Q  226 aaaagtaaattaattcttgtaaata 250  Q
    |||||||||||   |||||||||||    
T  34281779 aaaagtaaattgtctcttgtaaata 34281803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 5909481 - 5909620
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| ||||  ||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  5909481 gtcctatttacaagagaaaattgaccttttagatacattcaataatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatcta 5909580  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||||||   ||||||||||||||||| | ||||||    
T  5909581 aaaagtaaattgtctcttgtaaataggaccggaggaagta 5909620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 12426544 - 12426679
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  12426544 tatttataagagaaagttaattttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacgtaaattatttaatgtatctaaaaa 12426643  T
Q  230 gtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    ||||| |   ||||||||||| ||||| | ||||||    
T  12426644 gtaaactgtctcttgtaaataagaccggaggaagta 12426679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 20397953 - 20397823
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||||    
T  20397953 gtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatttaatgtatcta 20397854  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||| ||||||   |||| ||||||||||||    
T  20397853 aaaattaaattgtctcttataaataggaccg 20397823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 35427669 - 35427799
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||||||| ||||| ||||| ||||||| |||||||||| ||| ||||||| ||| || ||||||||||||||||||||||||||||||    
T  35427669 gtcctatttataagataaaattgatcttttaaatacattcaataatgtatgtatatagtcaaaaacataaaccaaatacataaattatttaatgtatcta 35427768  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  35427769 aaaagtaaattgtctcttgtaaataggaccg 35427799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 10599325 - 10599453
Alignment:
Q  126 gtcctatttataagataaagttga-ttttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct 224  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||||  ||||||||    
T  10599325 gtcctatttacaagataaagttgacttttttagatacattgaataatgtatgtatctagtcaaacacctaaaccaaatacataaattattgtatgtatct 10599424  T
Q  225 aaaaagtaaattaattcttgtaaatagga 253  Q
    ||||| ||||||   ||||||||||||||    
T  10599425 aaaaaataaattgtctcttgtaaatagga 10599453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 7107781 - 7107638
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| |||||||| ||||||||||||||||||||| ||| ||||||||||| || ||| |||||||||||||||||    
T  7107781 aatactacctccggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtatctagtcaaaaatctaaaccaaatacataaatta 7107682  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||| | ||||   ||||||||||| |||||    
T  7107681 tttaatgtatctaaaaaattaattgtctcttgtaaatatgaccg 7107638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 46680840 - 46680968
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| | |||||| |||| |||||||| |||||||| ||||||| ||||||||||||||| || | |||||| ||||||||||||||||||||||    
T  46680840 tcctatttacatgataaaattgactttttagacacattgaagaatgtatatatctagtcaagaacttaaatcaaatatataaattatttaatgtatctaa 46680939  T
Q  227 aaagtaaattaattcttgtaaataggacc 255  Q
    ||||||||||  |||||||||||| ||||    
T  46680940 aaagtaaattgtttcttgtaaataagacc 46680968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 12085034 - 12085142
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| | ||||||||||||||||||||||| |||  | ||||||||||| | ||||||||||||||||||||||||||||    
T  12085034 gtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtattaaatcaagaacctaaatcaaatacataaattatttaatgtatcta 12085133  T
Q  226 aaaagtaaa 234  Q
    |||| ||||    
T  12085134 aaaaataaa 12085142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 15074729 - 15074630
Alignment:
Q  152 ttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaatag 251  Q
    |||||||||||| ||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||     |||||||||  |||||||||||||    
T  15074729 ttttagatacatcgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtat-----aagtaaattgtttcttgtaaatag 15074635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 6174072 - 6173938
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||  ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||   ||||||||    
T  6174072 gtcctatttataagagaa--ttgtttttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatcctt---tgtatcta 6173978  T
Q  226 aaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||  ||||||   ||||||||||| ||||| ||| ||||    
T  6173977 aaatataaattgtctcttgtaaatatgaccggatggagta 6173938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 130 - 272
Target Start/End: Original strand, 17351486 - 17351627
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaa 229  Q
    |||||||| || ||||||||||| |||||||||||||||||| ||| |||||| ||||||| ||| |  ||||||||||||||||||| |||||||||||    
T  17351486 tatttataggagaaagttgatttgttagatacattgaataatttatgtatctactcaagaatcta-aataaatacataaattatttaacgtatctaaaaa 17351584  T
Q  230 gtaaattaattcttgtaaataggaccgaatgaagtaatttttt 272  Q
     | ||||   |||| |||||||||||| ||| |||| ||||||    
T  17351585 attaattgtctcttttaaataggaccggatggagtattttttt 17351627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 26564059 - 26563932
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| | | |||| |||| |||||||||||||||| ||  ||||| ||| |||| ||| ||||||||||||| ||||| ||| ||||||    
T  26564059 gtcctatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatcta 26563960  T
Q  226 aaaagtaaattaattcttgtaaatagga 253  Q
    |||||| ||||  |||||||||| ||||    
T  26563959 aaaagttaattgcttcttgtaaaaagga 26563932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 46449805 - 46449913
Alignment:
Q  143 aagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattct 242  Q
    ||||||| ||||||||||||||||||||| ||| ||| || | || || ||| |||||||| |||||||||||||||||| |||||| | ||||   |||    
T  46449805 aagttgactttttagatacattgaataatttatgtatttaattaaaaatctaaaccaaatatataaattatttaatgtatttaaaaaattaattgtctct 46449904  T
Q  243 tgtaaatag 251  Q
    |||||||||    
T  46449905 tgtaaatag 46449913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 4826760 - 4826901
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||| |||| |||||||||||||||| |||||| | ||||||||| |||| ||||||  || ||  ||| | ||||  || ||||||||||| || |||    
T  4826760 atactacctccagtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaa-atagaccaaatacatcaactat 4826858  T
Q  214 ttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    | |||| ||| ||||||||||||  ||||| || |||||||||    
T  4826859 tcaatgaatcaaaaaagtaaattgtttcttatatataggaccg 4826901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 8566219 - 8566114
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||| |||||||||||||| |||||| ||||  || ||||| ||| ||||  || ||||||||||| | ||||  |||| ||| |    
T  8566219 gtcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 8566120  T
Q  226 aaaagt 231  Q
    ||||||    
T  8566119 aaaagt 8566114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 36655493 - 36655436
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaa 187  Q
    |||||| |||| ||| |||| ||||||||||||||||| ||||||| |||||||||||    
T  36655493 tatttacaagagaaaattgaatttttagatacattgaacaatgtatgtatctagtcaa 36655436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 18672102 - 18672241
Alignment:
Q  125 agtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatct 224  Q
    ||||||||||| ||||   | ||||||||||||||||||||  |||| ||| ||| | | | |||| ||| |||  |||||||||||||| |||||||||    
T  18672102 agtcctatttacaagaagcaattgattttttagatacattgtttaatttatgtatgt-gcctagaatctaaaccggatacataaattattcaatgtatct 18672200  T
Q  225 aaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||| || ||||  || ||||||| ||||||| | ||||||    
T  18672201 aaaatgtcaatttttttttgtaaaaaggaccggaagaagta 18672241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 7107715 - 7107770
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||||| |||||||||||||||| || |   |||||||||||||||||    
T  7107715 atacataaattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccg 7107770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 10007714 - 10007627
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattat 213  Q
    ||||||||||||||| |||||||| ||||||||| ||||| |||||  || ||||| ||  ||||  || ||||||||||||| ||||    
T  10007714 gtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttat 10007627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 22055760 - 22055867
Alignment:
Q  146 ttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgt 245  Q
    |||| |||||||||| |||||||||| ||| |||  ||| |||||  || |||||||| |||||||||| ||| ||  |||||||| ||||  || ||||    
T  22055760 ttgactttttagatatattgaataatttatgtattcagtaaagaatttaaaccaaataaataaattattcaatatacgtaaaaagtcaattgttttttgt 22055859  T
Q  246 aaatagga 253  Q
    ||||||||    
T  22055860 aaatagga 22055867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 26563956 - 26564059
Alignment:
Q  151 tttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    |||||||||| |||||||||  ||| ||| | ||  |||  ||| |||| |||| ||||||||| ||||||||| |||||| ||||  ||||||||||||    
T  26563956 tttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctgaaaagtcaattgtttcttgtaaata 26564055  T
Q  251 ggac 254  Q
    ||||    
T  26564056 ggac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 29365772 - 29365714
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    |||||| ||||||||||||| ||||||| ||| |||| ||||||||| |||||| ||||    
T  29365772 aatactccctctagtcctatatataagaaaaaattgactttttagattcattgagtaat 29365714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 36245514 - 36245384
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| ||| |||| ||||||||| |||||| ||||  || ||||| ||| ||||  || ||||||||||| | ||||  |||| ||| |    
T  36245514 gtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 36245415  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||| || |  ||||| |||| |||||||    
T  36245414 aaaagtcaaatgtttcttataaacaggaccg 36245384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 2523908 - 2523863
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  2523908 gtcctatttataagaaaaagttgactttttagattcattgagtaat 2523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 12085088 - 12085023
Alignment:
Q  200 aatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagta 265  Q
    |||||||| |||||| |||||||||||| ||| ||||   ||||||||||||||||| ||| ||||    
T  12085088 aatacatacattattcaatgtatctaaacagtcaattttctcttgtaaataggaccggatggagta 12085023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 23248733 - 23248676
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||| |||||| |||||||||||||||| || |   |||||||||||||||||    
T  23248733 aaatacatatattattcaatgtatctaaaaagtcaactttatcttgtaaataggaccg 23248676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 23870993 - 23871034
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  23870993 tatttataagaaaaatttgattttttcgatacattgaataat 23871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 28677454 - 28677325
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    |||||||||||||| ||| |||| |||||||||  ||||| ||||  || ||||| ||| ||||  || ||||||||||| | ||||  |||| ||| ||    
T  28677454 tcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaa 28677355  T
Q  227 aaagtaaattaattcttgtaaataggaccg 256  Q
    ||||| || |  ||||| ||||||||||||    
T  28677354 aaagtcaaatgtttcttataaataggaccg 28677325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 41850610 - 41850651
Alignment:
Q  130 tatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  41850610 tatttataagaaaaagttaattttttagattcattgaataat 41850651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 32903644 - 32903572
Alignment:
Q  142 aaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatt 214  Q
    |||||||||||||||||||||||| | ||| ||| | |||| ||||||| ||| |  | ||||||||||||||    
T  32903644 aaagttgattttttagatacattggacaatttatgtttctaatcaagaatctaaataagatacataaattatt 32903572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 46449843 - 46449811
Alignment:
Q  199 aaatacataaattatttaatgtatctaaaaagt 231  Q
    |||||||||||||||| ||||||||||||||||    
T  46449843 aaatacataaattattcaatgtatctaaaaagt 46449811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 594 - 453
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  594 aatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaacgaaatacataaatta 495  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggac 254  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  494 tttaatgtatctaaaaagtaaattgtttcttgtaaataggac 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 528 - 583
Alignment:
Q  201 atacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||| |||||| |||||||||||||||| ||||   |||||||||||||||||    
T  528 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccg 583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 38976 - 38833
Alignment:
Q  113 aatacttcctctagtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaatta 212  Q
    |||||| ||||  |||||||||| |||| | ||||||  ||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  38976 aatactccctccggtcctatttacaagagacagttgacattttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaatta 38877  T
Q  213 tttaatgtatctaaaaagtaaattaattcttgtaaataggaccg 256  Q
    ||||||||||||||||||||||||   |||||||| ||||||||    
T  38876 tttaatgtatctaaaaagtaaattgtctcttgtaactaggaccg 38833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 11168 - 11038
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||| ||| |||||| |||||||| || ||||||||||||||||||||||||||||||    
T  11168 gtcctatttacaagagaaagttgactttttagatacattgaataatatatgtatctaatcaagaacttaaaccaaatacataaattatttaatgtatcta 11069  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   ||||||||| |||||||    
T  11068 aaaagtaaattgtctcttgtaaaaaggaccg 11038  T

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Target: scaffold0246 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 15292 - 15165
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| |||||| | ||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15292 gtcctatttacaagagaaagttaactttttagatacattgaataatgtacgtat-tagtcaagaacctaaaccaaatacataaattatttaatgtatcta 15194  T
Q  226 aaaagtaaattaattcttgtaaataggac 254  Q
    ||||| |||||  || |||||||||||||    
T  15193 aaaagcaaattgtttattgtaaataggac 15165  T

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Target: scaffold0024 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 36092 - 35962
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    |||||||||| |||| ||| |||| ||||||||| |||| ||||||| || |||||||| ||||||||| || |||||||||||||||||||||||||||    
T  36092 gtcctatttacaagagaaaattgactttttagatgcattcaataatgcatgtatctagttaagaacctaaacaaaatacataaattatttaatgtatcta 35993  T
Q  226 aaaagtaaattaattcttgtaaataggaccg 256  Q
    |||||||||||   |||||||||||||||||    
T  35992 aaaagtaaattgtctcttgtaaataggaccg 35962  T

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Target: scaffold0592 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 516 - 407
Alignment:
Q  127 tcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaa 226  Q
    ||||||||| |||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||| |||||||    
T  516 tcctatttacaagagaaggttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccatatatataaattatttaatatatctaa 417  T
Q  227 aaagtaaatt 236  Q
    ||||||||||    
T  416 aaagtaaatt 407  T

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Target: scaffold0007 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 77355 - 77458
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatcta 225  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  77355 gtcctatttataagagaaagttgacttttcagatacattgaataatttatgtatgtagtcaagaatctaaaccaaatacataaattatttaatgtatcta 77454  T
Q  226 aaaa 229  Q
    ||||    
T  77455 aaaa 77458  T

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Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 3641 - 3774
Alignment:
Q  126 gtcctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatac---------ataaattattta 216  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||         ||||||||||||    
T  3641 gtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatataaattattta 3740  T
Q  217 atgtatctaaaaagtaaattaattcttgtaaata 250  Q
    ||||||||||||||||||||   |||||||||||    
T  3741 atgtatctaaaaagtaaattgtctcttgtaaata 3774  T

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Target: scaffold0067 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 5351 - 5229
Alignment:
Q  129 ctatttataagataaagttgattttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaa 228  Q
    ||||||| |||| ||| || | |||||||||| |||||||||| ||| ||| |||||||||||||| |||||||| |||||||||||||| |||  ||||    
T  5351 ctatttacaagagaaaattaactttttagataaattgaataatatatgtatttagtcaagaacctaaaccaaatatataaattatttaatatattaaaaa 5252  T
Q  229 agtaaattaattcttgtaaatag 251  Q
    ||||||||  |||||||||||||    
T  5251 agtaaattgtttcttgtaaatag 5229  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 183828 - 183926
Alignment:
Q  152 ttttagatacattgaataatgtatttatctagtcaagaacctacaccaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaata 250  Q
    ||||| |||||||||||||| ||| ||| | ||||| || ||| ||   |||||||||||||| ||| ||| |||||||| |||||||| |||||||||    
T  183828 ttttaaatacattgaataatttatgtatttggtcaaaaatctaaacttgatacataaattattcaatatatttaaaaagttaattaatttttgtaaata 183926  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 54646 - 54721
Alignment:
Q  196 accaaatacataaattatttaatgtatctaaaaagtaaattaattcttgtaaataggaccgaatgaagtaattttt 271  Q
    |||| |||| ||||||||| ||||||||| |||||| ||||| ||| ||||||||||| || | |||||| |||||    
T  54646 accatatacttaaattattcaatgtatctgaaaagtcaattatttcctgtaaataggatcggaggaagtatttttt 54721  T

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Target: scaffold0242 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 16505 - 16562
Alignment:
Q  114 atacttcctctagtcctatttataagataaagttgattttttagatacattgaataat 171  Q
    ||||| |||| ||||||||||| |||| |||||| ||||||||||| |||| ||||||    
T  16505 atactacctccagtcctatttacaagaaaaagttaattttttagattcattcaataat 16562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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