View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1637-INSERTION-6 (Length: 629)

Name: NF1637-INSERTION-6
Description: NF1637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1637-INSERTION-6
NF1637-INSERTION-6
[»] chr3 (49 HSPs)
chr3 (391-629)||(31157433-31157671)
chr3 (121-311)||(31157750-31157940)
chr3 (396-497)||(44413283-44413384)
chr3 (396-496)||(24256660-24256760)
chr3 (396-497)||(19149072-19149173)
chr3 (396-500)||(27541387-27541491)
chr3 (389-497)||(36670902-36671010)
chr3 (396-499)||(44813218-44813321)
chr3 (401-499)||(46623994-46624092)
chr3 (401-497)||(16969454-16969550)
chr3 (396-500)||(38926710-38926814)
chr3 (407-498)||(55151604-55151695)
chr3 (399-497)||(32924169-32924267)
chr3 (403-497)||(47472418-47472512)
chr3 (396-498)||(52939733-52939835)
chr3 (396-497)||(26014894-26014995)
chr3 (396-499)||(52326101-52326204)
chr3 (424-498)||(41309227-41309301)
chr3 (396-494)||(42358529-42358627)
chr3 (421-499)||(44383296-44383374)
chr3 (396-498)||(52254025-52254127)
chr3 (396-493)||(5244311-5244408)
chr3 (396-497)||(42356972-42357073)
chr3 (424-500)||(5114188-5114264)
chr3 (396-500)||(13348019-13348123)
chr3 (421-497)||(37503635-37503711)
chr3 (413-500)||(44856052-44856139)
chr3 (421-499)||(21217619-21217697)
chr3 (407-501)||(37302639-37302733)
chr3 (401-494)||(8847197-8847289)
chr3 (424-497)||(13735840-13735913)
chr3 (451-500)||(33939375-33939424)
chr3 (433-497)||(7934093-7934157)
chr3 (396-496)||(35597244-35597344)
chr3 (421-496)||(23592565-23592640)
chr3 (413-500)||(25641468-25641555)
chr3 (401-496)||(35201323-35201418)
chr3 (396-499)||(37056943-37057046)
chr3 (413-499)||(35376967-35377053)
chr3 (401-498)||(39630504-39630601)
chr3 (451-500)||(42478094-42478145)
chr3 (396-496)||(50559101-50559200)
chr3 (413-500)||(44445393-44445480)
chr3 (396-499)||(51982181-51982284)
chr3 (430-496)||(23600709-23600775)
chr3 (396-497)||(288808-288909)
chr3 (451-500)||(7668073-7668122)
chr3 (396-472)||(20547903-20547979)
chr3 (396-496)||(28539629-28539729)
[»] chr2 (29 HSPs)
chr2 (396-505)||(9990773-9990882)
chr2 (396-499)||(22888703-22888806)
chr2 (396-499)||(1248768-1248871)
chr2 (413-497)||(7698270-7698354)
chr2 (396-496)||(9207672-9207772)
chr2 (407-494)||(6049236-6049323)
chr2 (396-500)||(18254094-18254198)
chr2 (396-500)||(42421783-42421887)
chr2 (430-497)||(3838768-3838835)
chr2 (396-500)||(9760100-9760204)
chr2 (396-499)||(8848583-8848686)
chr2 (407-497)||(19633375-19633466)
chr2 (407-497)||(19830276-19830367)
chr2 (396-500)||(9194323-9194427)
chr2 (396-500)||(9647214-9647318)
chr2 (396-500)||(32477414-32477518)
chr2 (421-499)||(2076676-2076754)
chr2 (396-498)||(41195666-41195768)
chr2 (401-499)||(43487466-43487564)
chr2 (396-500)||(41042336-41042440)
chr2 (389-494)||(42091393-42091500)
chr2 (425-500)||(21611540-21611615)
chr2 (421-496)||(41056636-41056711)
chr2 (421-499)||(13333056-13333134)
chr2 (421-499)||(25270468-25270546)
chr2 (396-498)||(37737858-37737960)
chr2 (430-499)||(3097747-3097816)
chr2 (430-498)||(27490617-27490685)
chr2 (457-497)||(42434262-42434302)
[»] chr4 (40 HSPs)
chr4 (401-498)||(36177993-36178090)
chr4 (396-494)||(24575742-24575840)
chr4 (396-498)||(26724859-26724961)
chr4 (396-500)||(26732307-26732411)
chr4 (396-499)||(26492089-26492192)
chr4 (407-500)||(51986135-51986228)
chr4 (396-499)||(23369218-23369321)
chr4 (430-499)||(2575676-2575745)
chr4 (389-498)||(5622533-5622642)
chr4 (396-497)||(53801647-53801748)
chr4 (424-500)||(31641450-31641526)
chr4 (413-497)||(38376378-38376462)
chr4 (396-499)||(44539816-44539919)
chr4 (407-497)||(43175077-43175167)
chr4 (424-497)||(39440594-39440667)
chr4 (396-499)||(39195139-39195242)
chr4 (396-499)||(42853659-42853762)
chr4 (396-498)||(27050973-27051075)
chr4 (421-499)||(34616668-34616746)
chr4 (421-499)||(38382428-38382506)
chr4 (421-499)||(47181948-47182026)
chr4 (421-499)||(48402083-48402161)
chr4 (436-497)||(26907970-26908031)
chr4 (407-500)||(29175318-29175411)
chr4 (413-497)||(15175645-15175729)
chr4 (396-500)||(37997336-37997440)
chr4 (389-497)||(46213045-46213153)
chr4 (411-499)||(56363931-56364019)
chr4 (396-499)||(10250401-10250504)
chr4 (396-499)||(37297131-37297233)
chr4 (396-497)||(38510661-38510760)
chr4 (396-494)||(42395928-42396026)
chr4 (430-499)||(11672009-11672078)
chr4 (389-500)||(19473841-19473952)
chr4 (451-498)||(27965122-27965169)
chr4 (397-464)||(31995836-31995903)
chr4 (435-497)||(5233558-5233620)
chr4 (430-500)||(11068804-11068874)
chr4 (413-499)||(20692249-20692335)
chr4 (430-491)||(45083088-45083149)
[»] chr1 (39 HSPs)
chr1 (396-500)||(19055644-19055748)
chr1 (396-494)||(45333793-45333891)
chr1 (396-497)||(48470721-48470822)
chr1 (396-499)||(27464943-27465046)
chr1 (396-502)||(15469940-15470045)
chr1 (396-498)||(33100890-33100992)
chr1 (407-493)||(40861154-40861240)
chr1 (396-501)||(23645493-23645598)
chr1 (396-500)||(649851-649955)
chr1 (396-499)||(31088263-31088366)
chr1 (396-499)||(45121367-45121469)
chr1 (424-498)||(30735180-30735254)
chr1 (396-497)||(19947632-19947733)
chr1 (406-499)||(21401490-21401583)
chr1 (424-497)||(26469469-26469542)
chr1 (424-493)||(35369810-35369879)
chr1 (396-497)||(50726136-50726237)
chr1 (396-500)||(18434877-18434981)
chr1 (435-499)||(30467419-30467483)
chr1 (396-491)||(3851240-3851335)
chr1 (401-500)||(37274918-37275017)
chr1 (396-498)||(10627697-10627799)
chr1 (421-499)||(46907302-46907380)
chr1 (396-497)||(3981914-3982015)
chr1 (396-497)||(44519039-44519140)
chr1 (421-505)||(18512223-18512307)
chr1 (413-497)||(37619643-37619727)
chr1 (396-500)||(43775288-43775392)
chr1 (456-500)||(45640443-45640487)
chr1 (396-498)||(8828011-8828110)
chr1 (421-491)||(50932411-50932481)
chr1 (396-497)||(8350087-8350187)
chr1 (424-497)||(37685439-37685512)
chr1 (424-497)||(37700006-37700079)
chr1 (413-464)||(4776855-4776906)
chr1 (396-498)||(52576188-52576291)
chr1 (424-497)||(44914459-44914533)
chr1 (441-497)||(26207968-26208024)
chr1 (461-505)||(41677216-41677260)
[»] chr7 (20 HSPs)
chr7 (407-502)||(3937006-3937101)
chr7 (389-498)||(43025415-43025524)
chr7 (401-498)||(24614203-24614300)
chr7 (396-497)||(38956506-38956607)
chr7 (396-496)||(32529745-32529845)
chr7 (396-499)||(48062139-48062242)
chr7 (421-499)||(7701651-7701729)
chr7 (396-498)||(40112841-40112943)
chr7 (396-498)||(41189428-41189532)
chr7 (396-497)||(44895460-44895561)
chr7 (396-500)||(25192802-25192906)
chr7 (396-497)||(41989628-41989731)
chr7 (421-499)||(46022153-46022231)
chr7 (425-502)||(43942743-43942820)
chr7 (390-496)||(47391214-47391320)
chr7 (396-497)||(46578023-46578124)
chr7 (396-491)||(1504254-1504349)
chr7 (400-498)||(35627907-35628005)
chr7 (413-497)||(9428515-9428599)
chr7 (421-497)||(40417881-40417957)
[»] chr5 (30 HSPs)
chr5 (401-499)||(1671629-1671727)
chr5 (407-501)||(18258677-18258771)
chr5 (396-499)||(26791130-26791233)
chr5 (396-498)||(14051202-14051304)
chr5 (396-501)||(22972199-22972304)
chr5 (396-496)||(1764306-1764406)
chr5 (389-497)||(33037595-33037703)
chr5 (396-499)||(36739030-36739133)
chr5 (396-497)||(7287077-7287178)
chr5 (396-497)||(15479551-15479652)
chr5 (396-497)||(28306020-28306121)
chr5 (399-499)||(8686976-8687076)
chr5 (401-500)||(28467338-28467437)
chr5 (396-494)||(2972406-2972504)
chr5 (396-498)||(5168265-5168367)
chr5 (421-499)||(17626093-17626171)
chr5 (430-500)||(39591796-39591866)
chr5 (430-500)||(39592188-39592258)
chr5 (407-497)||(41321348-41321438)
chr5 (407-496)||(13168615-13168704)
chr5 (396-497)||(14923155-14923256)
chr5 (396-498)||(35634722-35634825)
chr5 (430-496)||(42175035-42175101)
chr5 (396-489)||(7076464-7076557)
chr5 (396-497)||(18660841-18660941)
chr5 (396-499)||(1274440-1274542)
chr5 (401-458)||(1079879-1079936)
chr5 (451-500)||(7552852-7552901)
chr5 (396-489)||(27487969-27488062)
chr5 (401-500)||(33655298-33655398)
[»] chr6 (20 HSPs)
chr6 (396-497)||(14818014-14818115)
chr6 (396-505)||(18737447-18737556)
chr6 (396-497)||(552875-552976)
chr6 (413-494)||(30423443-30423524)
chr6 (407-498)||(1156813-1156904)
chr6 (396-498)||(32316815-32316917)
chr6 (421-497)||(13689882-13689958)
chr6 (407-503)||(33430244-33430340)
chr6 (430-500)||(15974724-15974794)
chr6 (421-499)||(16199557-16199635)
chr6 (396-501)||(34047469-34047574)
chr6 (389-497)||(5694039-5694147)
chr6 (396-500)||(26595431-26595535)
chr6 (396-499)||(4820449-4820552)
chr6 (413-496)||(11612287-11612370)
chr6 (396-501)||(24900856-24900961)
chr6 (421-485)||(11014890-11014954)
chr6 (401-497)||(31077881-31077977)
chr6 (396-497)||(17551267-17551367)
chr6 (440-496)||(32442537-32442593)
[»] scaffold0056 (1 HSPs)
scaffold0056 (396-500)||(76504-76608)
[»] chr8 (18 HSPs)
chr8 (396-499)||(27325840-27325943)
chr8 (401-500)||(37449310-37449409)
chr8 (396-497)||(4054174-4054275)
chr8 (396-497)||(42768286-42768387)
chr8 (396-496)||(36660339-36660439)
chr8 (396-499)||(12898815-12898918)
chr8 (407-498)||(34186700-34186791)
chr8 (424-491)||(36251436-36251503)
chr8 (421-498)||(24479330-24479407)
chr8 (401-499)||(10839368-10839466)
chr8 (396-498)||(11253429-11253531)
chr8 (396-498)||(29025342-29025444)
chr8 (424-494)||(32501087-32501157)
chr8 (396-497)||(22719522-22719623)
chr8 (441-494)||(36816507-36816560)
chr8 (396-497)||(7271932-7272033)
chr8 (396-489)||(44415774-44415867)
chr8 (396-468)||(27854685-27854757)
[»] scaffold0199 (1 HSPs)
scaffold0199 (407-505)||(8761-8859)
[»] scaffold0098 (1 HSPs)
scaffold0098 (401-497)||(49382-49478)
[»] scaffold0519 (1 HSPs)
scaffold0519 (396-498)||(11864-11966)
[»] scaffold0148 (1 HSPs)
scaffold0148 (413-502)||(20784-20873)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 391 - 629
Target Start/End: Complemental strand, 31157671 - 31157433
Alignment:
Q  391 ttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataac 490  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||| ||||| ||| || |||||| ||||||||||||| || ||||||||||||||    
T  31157671 ttttcctccttattgttttgatttttgtaccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataac 31157572  T
Q  491 acaactctttcttttccatattccatcaccaatgtttccaccaccgtcattcaccgacaaaaacaacaaaaatcacaacaatattggaaacaattgtttg 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31157571 acaactctttcttttccatattccatcaccaatgtttccaccaccgtcattcaccgacaaaaacaacaaaaatcacagcaatattggaaacaattgtttg 31157472  T
Q  591 aggaaaacacggtaatgacacggccaccatagatagaat 629  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  31157471 aggaaaacacggtaatgacacggccaccataaatagaat 31157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 121 - 311
Target Start/End: Complemental strand, 31157940 - 31157750
Alignment:
Q  121 tatctaacaattatgaaacgaaggtactacattaataatccaatctagttaacgaggaacatgtcttattgttctgcgggtgagagacggtgtgtcgggg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31157940 tatctaacaattatgaaacgaaggtactacattaataatccaatctagttaacgaggaacatgtcttattgttctgcgggagagagacggtgtgtcgggg 31157841  T
Q  221 aactctgttttagaagattctttgaaaagtggagttccattttcacaaacaaaatagaatctttcaccgttttgaccaaactcatttctct 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31157840 aactctgttttagaagattctttgaaaagtggagttccattttcacaaacaaaatagaatctttcaccgttttgaccaaactcatttctct 31157750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 44413384 - 44413283
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||| || || |||||| ||||||||| ||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  44413384 ctctttattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaac 44413285  T
Q  496 tc 497  Q
    ||    
T  44413284 tc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 24256760 - 24256660
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||||||||  ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  24256760 ctctttattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaac 24256661  T
Q  496 t 496  Q
    |    
T  24256660 t 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 19149072 - 19149173
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||||||||| |||||| ||| || || ||||||||| ||||| ||| |||||||||||| || ||||||| || |||||||||||||||||||    
T  19149072 ctctttattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaac 19149171  T
Q  496 tc 497  Q
    ||    
T  19149172 tc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 27541491 - 27541387
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  27541491 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 27541392  T
Q  496 tcttt 500  Q
    |||||    
T  27541391 tcttt 27541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 36671010 - 36670902
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| ||||| ||||| |||||| ||| ||||| ||||| ||| ||||| |||  |||||||||||||||||||||| || ||||||||||||    
T  36671010 actttttctctctattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaata 36670911  T
Q  489 acacaactc 497  Q
    |||||||||    
T  36670910 acacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 44813218 - 44813321
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| || || |||||| ||| ||||||||||||||| ||||| ||| |||| |||||||||| ||||||| |||||||||||||| |||||||    
T  44813218 ctctctattgcttgggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaac 44813317  T
Q  496 tctt 499  Q
    ||||    
T  44813318 tctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 46623994 - 46624092
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||||||||| ||||||  || ||||| |||| |||| ||||| ||| ||||||||||||||||||||||  || |||||||||||||||||||||||    
T  46623994 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 16969550 - 16969454
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||||||||  |||| | ||| ||||| ||||||||| ||||| |||| |||||||||||||| ||||||| || |||||||||||||||||||||    
T  16969550 tattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 38926710 - 38926814
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||| ||||| |||  ||||||| |||||| ||||||| ||||||||||||||||||||||    
T  38926710 ctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaac 38926809  T
Q  496 tcttt 500  Q
    |||||    
T  38926810 tcttt 38926814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 407 - 498
Target Start/End: Complemental strand, 55151695 - 55151604
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| ||||||  |||||| | ||||||||| ||||| ||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||    
T  55151695 tttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 32924267 - 32924169
Alignment:
Q  399 tttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||||| ||||| ||||||  || ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||||    
T  32924267 tttattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 497
Target Start/End: Original strand, 47472418 - 47472512
Alignment:
Q  403 ttgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||||| | |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| |||||||||||||||||| |||||    
T  47472418 ttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 52939733 - 52939835
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  ||||||| |||||| ||||||| || |||||||||||||||||||    
T  52939733 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaac 52939832  T
Q  496 tct 498  Q
    |||    
T  52939833 tct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 26014894 - 26014995
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||| ||  ||||| ||||||||| ||||| |||  |||||||||||||| ||||||  ||||||||| ||||||||||||    
T  26014894 ctctctattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaac 26014993  T
Q  496 tc 497  Q
    ||    
T  26014994 tc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 52326101 - 52326204
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||| |   ||||| ||||||||| ||||| ||| ||||||| ||||||| ||| ||| || |||||||||||||||||||    
T  52326101 ctctctattgttttggtttttgtgcacttacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaac 52326200  T
Q  496 tctt 499  Q
    ||||    
T  52326201 tctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 498
Target Start/End: Original strand, 41309227 - 41309301
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| |||| |||| ||||| ||| |||||||||||||||||| |||| || ||||||||||||||||||||||    
T  41309227 tacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 494
Target Start/End: Complemental strand, 42358627 - 42358529
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||| ||||| ||||  ||||||  |||||||| |||||||||  |||| ||| ||||||||||||||| ||||||| || ||||||||||||||||||    
T  42358627 ctctctattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 44383296 - 44383374
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| ||| |||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  44383296 caatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 52254127 - 52254025
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||| ||||| |||| ||||||||||| || ||||||| || ||||||||||| |||||||    
T  52254127 ctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaac 52254028  T
Q  496 tct 498  Q
    |||    
T  52254027 tct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 493
Target Start/End: Original strand, 5244311 - 5244408
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacaca 493  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  ||||||||||| || ||||||| ||| ||||||||||||||||    
T  5244311 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 42357073 - 42356972
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||| ||||| |||  ||||||||||| || ||||||| || |||||||||||||||||||    
T  42357073 ctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaac 42356974  T
Q  496 tc 497  Q
    ||    
T  42356973 tc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 424 - 500
Target Start/End: Original strand, 5114188 - 5114264
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||| |||| |||| ||||| ||| ||||||| |||| || ||||||| |||||||||||||||||||||||||||    
T  5114188 tacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactcttt 5114264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 13348123 - 13348019
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||| |||||||| |||| |||| ||||| |||  ||||| |||||||| ||| ||| || ||||||||||||||| |||    
T  13348123 ctctctattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataac 13348024  T
Q  496 tcttt 500  Q
    |||||    
T  13348023 tcttt 13348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 421 - 497
Target Start/End: Complemental strand, 37503711 - 37503635
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| || |||||||||  |||| |||  |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  37503711 caatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 44856052 - 44856139
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||||| ||| ||||| ||||||||| ||||| |||  |||||| | ||||| ||||||| || ||||||||||||||||||||||||    
T  44856052 ttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactcttt 44856139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 21217619 - 21217697
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  21217619 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 501
Target Start/End: Original strand, 37302639 - 37302733
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttc 501  Q
    ||||| |||||| ||| ||||| |||||||||  |||| ||| ||||||||||||||| ||| ||  || ||||||||||||| |||||||||||    
T  37302639 tttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactctttc 37302733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 494
Target Start/End: Original strand, 8847197 - 8847289
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    ||||||||||| |||||| ||||||||| ||||  ||| ||||| ||| ||| ||||||||||| | ||||| || ||||||||||||||||||    
T  8847197 tattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 13735840 - 13735913
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| |||||||||  |||| |||  |||||||||||||| ||||||| || |||||||||||||||||||||    
T  13735840 tacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 500
Target Start/End: Original strand, 33939375 - 33939424
Alignment:
Q  451 ttgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  33939375 ttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 33939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 497
Target Start/End: Original strand, 7934093 - 7934157
Alignment:
Q  433 tcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||| ||||| |||| ||||||||||| || ||||||| || |||||||||||||||||||||    
T  7934093 tcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 35597244 - 35597344
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  || |||||  |||||||| ||||| |||  |||||||||||||| ||||||| ||  || |||||||||||||||    
T  35597244 ctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaac 35597343  T
Q  496 t 496  Q
    |    
T  35597344 t 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 496
Target Start/End: Original strand, 23592565 - 23592640
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || ||||||||||||||||||||    
T  23592565 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 25641555 - 25641468
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||||| ||||||||| |||| || | |||||||||  ||||| |||||||| ||| ||| || ||||||||||||| ||||||||||    
T  25641555 ttttgtgccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactcttt 25641468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 401 - 496
Target Start/End: Complemental strand, 35201418 - 35201323
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    ||||||||||| ||||||  ||||| || |||| |||| || || |||||||||| |||||||| |||  || || ||||||||||||||||||||    
T  35201418 tattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 37057046 - 37056943
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||| | ||||||  |||||||| |||| |||| |||||  ||  ||||| |||||||| ||| ||| || |||||||||||||||||||    
T  37057046 ctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 37056947  T
Q  496 tctt 499  Q
    ||||    
T  37056946 tctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 499
Target Start/End: Complemental strand, 35377053 - 35376967
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||| ||||||| | |||| |||| ||||| |||  |||||||||||||| |||  || || |||||||||||||||||||||||    
T  35377053 ttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 35376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 498
Target Start/End: Complemental strand, 39630601 - 39630504
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    |||| |||||| |||||| | || ||||||||| |||| ||||| ||| ||||||  |||| |||| | ||| |||||||||||||||||| ||||||    
T  39630601 tattattttggtttttgtgctaacacctaattttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 500
Target Start/End: Original strand, 42478094 - 42478145
Alignment:
Q  451 ttgtcacaaaagttatcacatagata--gatgttcaaataacacaactcttt 500  Q
    |||||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  42478094 ttgtcacaaaagttatcatatatatatggatgttcaaataacacaactcttt 42478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 50559200 - 50559101
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||  |||| |||||||||||  |||| ||||||||  | |  |||||| |||| |||||||||| |||| |||||||||||||||||    
T  50559200 ctctctattgttttgatttttataccaataccttttttc-tttataaatttatggttgtcataaaaattatcacataaatagttgttcaaataacacaac 50559102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 44445393 - 44445480
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||||| | |||| || |||| |||||||||| |||  |||||| ||||||| | ||||| || ||||||||||||||| ||||||||    
T  44445393 ttttgtgcaaatatctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactcttt 44445480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 51982181 - 51982284
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||| | ||||||  |||||||| |||| |||||||||| |||| ||||| ||||| || | | ||| || ||| |||||||||||||||    
T  51982181 ctctctattgctttagtttttgtgtcaataccttattttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaac 51982280  T
Q  496 tctt 499  Q
    ||||    
T  51982281 tctt 51982284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 496
Target Start/End: Original strand, 23600709 - 23600775
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    |||| |||||||||| |||  ||||| |||||||| ||| ||| || ||||||||||||||||||||    
T  23600709 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 288808 - 288909
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || || || ||||| ||| ||||| ||| ||||| |||| |||| ||||||| || ||| |||||||||||||||    
T  288808 ctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaac 288907  T
Q  496 tc 497  Q
    ||    
T  288908 tc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 500
Target Start/End: Complemental strand, 7668122 - 7668073
Alignment:
Q  451 ttgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||||||||||||| ||||||  || |||||||||||||||||| |||||    
T  7668122 ttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattcttt 7668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 472
Target Start/End: Complemental strand, 20547979 - 20547903
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacata 472  Q
    |||| ||||| ||||  |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| |||||||    
T  20547979 ctctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacata 20547903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 28539729 - 28539629
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| |||| ||||||| |||| || | |||| ||||  |||| |||  || |||||||||||||||  || || |||||||||||||||||||    
T  28539729 ctctctattgctttgacttttgtgccaaaacatcattttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaac 28539630  T
Q  496 t 496  Q
    |    
T  28539629 t 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 9990773 - 9990882
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||||||| ||| | ||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  9990773 ctctctattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaac 9990872  T
Q  496 tctttctttt 505  Q
    ||||||||||    
T  9990873 tctttctttt 9990882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 22888806 - 22888703
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||| ||||| |||||| ||||||||| ||||||||| ||||| ||| ||||||||||||||| ||||||| || |||||||||||||||||||    
T  22888806 ctctttattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaac 22888707  T
Q  496 tctt 499  Q
    ||||    
T  22888706 tctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 1248768 - 1248871
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| ||||||| ||||||||||| ||||||| || |||||||||||||||||||    
T  1248768 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaac 1248867  T
Q  496 tctt 499  Q
    ||||    
T  1248868 tctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 7698270 - 7698354
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||| ||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||  |||||||||| |||||||||||||    
T  7698270 ttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 9207672 - 9207772
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||    
T  9207672 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaac 9207771  T
Q  496 t 496  Q
    |    
T  9207772 t 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 407 - 494
Target Start/End: Complemental strand, 6049323 - 6049236
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    ||||| |||||| ||||||||| ||||||||| ||||| ||| ||||||||||||||| ||||||| || ||||||||||||||||||    
T  6049323 tttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 18254198 - 18254094
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| || || ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  18254198 ctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 18254099  T
Q  496 tcttt 500  Q
    |||||    
T  18254098 tcttt 18254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 42421887 - 42421783
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||| |||||  ||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| ||  ||||||||||||||||||    
T  42421887 ctctttattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 42421788  T
Q  496 tcttt 500  Q
    |||||    
T  42421787 tcttt 42421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 430 - 497
Target Start/End: Complemental strand, 3838835 - 3838768
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||||||| ||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  3838835 atttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 9760100 - 9760204
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||| | |||||| ||| ||||| ||||||||   |||| |||  |||||||||||||| ||||||| ||||||||||||||||||||||    
T  9760100 ctctctattgctttagattttgtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaac 9760199  T
Q  496 tcttt 500  Q
    |||||    
T  9760200 tcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 8848686 - 8848583
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  |||||||||||||| | |||| ||||  |||| ||| |||||||||||| ||||||  || ||||||||||||||||||||||    
T  8848686 ctctctattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaac 8848587  T
Q  496 tctt 499  Q
    ||||    
T  8848586 tctt 8848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 497
Target Start/End: Original strand, 19633375 - 19633466
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatc-acatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||| || ||||| ||||||||| ||||| ||| |||||||||||||||||| ||||| ||| |||||||||||| |||||||    
T  19633375 tttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19633466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 497
Target Start/End: Original strand, 19830276 - 19830367
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatc-acatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||| || ||||| ||||||||| ||||| ||| |||||||||||||||||| ||||| ||| |||||||||||| |||||||    
T  19830276 tttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19830367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 9194323 - 9194427
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||| ||| ||||| ||||| ||| ||||| |||  ||||||||||| || | ||||| ||  ||||||||||||||||||    
T  9194323 ctctctattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaac 9194422  T
Q  496 tcttt 500  Q
    |||||    
T  9194423 tcttt 9194427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 9647214 - 9647318
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||| | ||||||||| ||||| |||  ||||||||||||||||| |||| ||  ||||||||||||||||||    
T  9647214 ctctctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaac 9647313  T
Q  496 tcttt 500  Q
    |||||    
T  9647314 tcttt 9647318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 32477414 - 32477518
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  |||||||  ||||||| ||||||||| | ||| |||  |||||||||||||| ||||||| ||  ||||||||||||||||||    
T  32477414 ctctatattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 32477513  T
Q  496 tcttt 500  Q
    |||||    
T  32477514 tcttt 32477518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 2076676 - 2076754
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||| ||||| |||  |||||||||||||| ||||||  || |||||||||||||||||||||||    
T  2076676 caatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 41195666 - 41195768
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  ||||| || ||||||||| ||||| |||  |||||||||||||| | ||||| ||  ||||||||||||||||||    
T  41195666 ctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaac 41195765  T
Q  496 tct 498  Q
    |||    
T  41195766 tct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 43487466 - 43487564
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||| ||||| ||||||  || ||||| ||||||||| ||||| |||  |||| |||||| || ||||||| || |||||||||||||||||||||||    
T  43487466 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 41042336 - 41042440
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||| |  ||||| || ||||||||||||||| |||  |||||| |||| || ||||||| || ||||||||||||||| |||    
T  41042336 ctctctattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaac 41042435  T
Q  496 tcttt 500  Q
    |||||    
T  41042436 tcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 494
Target Start/End: Complemental strand, 42091500 - 42091393
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcac--atagatagatgttcaaa 486  Q
    ||||||||||| ||||| ||||| ||||||  || |||||  |||||||| ||||| |||  ||||||||||| || ||||  ||| |||||||||||||    
T  42091500 acttttcctctctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaa 42091401  T
Q  487 taacacaa 494  Q
    ||||||||    
T  42091400 taacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 21611615 - 21611540
Alignment:
Q  425 acctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||| ||||| ||| ||||| |||  |||||| ||||||| ||||||| || ||||||||||||||||||||||||    
T  21611615 accttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactcttt 21611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 496
Target Start/End: Complemental strand, 41056711 - 41056636
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || ||||||||||||||||||||    
T  41056711 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 13333134 - 13333056
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||| | |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  13333134 caatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 25270546 - 25270468
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| | |||||| ||| ||| || |||||||||||||||||||||||    
T  25270546 caatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 37737960 - 37737858
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  ||||||  ||||| || ||||||||| ||||  |||  |||||||||||||| ||||||| || || ||||||||||||||||    
T  37737960 ctctctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaac 37737861  T
Q  496 tct 498  Q
    |||    
T  37737860 tct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 3097816 - 3097747
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  3097816 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 498
Target Start/End: Complemental strand, 27490685 - 27490617
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    |||| |||| ||||| ||| ||||||||||||||| |||   | || ||||||||||||||||||||||    
T  27490685 attttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 42434262 - 42434302
Alignment:
Q  457 caaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||||| ||| ||| ||||||||||||||||||||||||    
T  42434262 caaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 401 - 498
Target Start/End: Original strand, 36177993 - 36178090
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| ||||| |||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  36177993 tattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 494
Target Start/End: Complemental strand, 24575840 - 24575742
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||| |||  |||||||||||||| ||||||| |||||||||||||||||||||    
T  24575840 ctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 26724961 - 26724859
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  || ||||| ||||||||| ||||| |||| |||| ||||||||||||||||| || |||||||||||||||||||    
T  26724961 ctctctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaac 26724862  T
Q  496 tct 498  Q
    |||    
T  26724861 tct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 26732307 - 26732411
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||| ||| ||||| |||| |||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  26732307 ctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 26732406  T
Q  496 tcttt 500  Q
    |||||    
T  26732407 tcttt 26732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 26492089 - 26492192
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||| | ||||||||| ||||| ||| |||||||||||| || ||||||| ||||||||||||||||||||||    
T  26492089 ctctctattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaac 26492188  T
Q  496 tctt 499  Q
    ||||    
T  26492189 tctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 407 - 500
Target Start/End: Original strand, 51986135 - 51986228
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  51986135 tttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 51986228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 23369321 - 23369218
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||| | |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  23369321 ctctctattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 23369222  T
Q  496 tctt 499  Q
    ||||    
T  23369221 tctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 2575745 - 2575676
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||| |||| |||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  2575745 attttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 5622533 - 5622642
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| ||||| ||||| |||||| | | ||||| ||||||||| ||||| |||| || ||||||||||| | ||||| |||||| ||||||||    
T  5622533 actttttctctctattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaata 5622632  T
Q  489 acacaactct 498  Q
    ||||||||||    
T  5622633 acacaactct 5622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 53801748 - 53801647
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||| | ||||||  |||||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  53801748 ctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 53801649  T
Q  496 tc 497  Q
    ||    
T  53801648 tc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 424 - 500
Target Start/End: Complemental strand, 31641526 - 31641450
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||| ||||||||||||||| |||  ||||||||||||||||||| || ||  |||||||||||||||||||||||    
T  31641526 taccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactcttt 31641450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 413 - 497
Target Start/End: Complemental strand, 38376462 - 38376378
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||| ||| || || |||| |||| ||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  38376462 ttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 44539816 - 44539919
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| ||  ||||||||||||||||||    
T  44539816 ctctctattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 44539915  T
Q  496 tctt 499  Q
    ||||    
T  44539916 tctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 497
Target Start/End: Original strand, 43175077 - 43175167
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||  || ||||| ||||||||| ||||| ||| ||| ||||||||||| ||||||| || |||||||||||||||||||||    
T  43175077 tttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 39440594 - 39440667
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||||| ||||| ||| ||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  39440594 tacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 39195139 - 39195242
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| || ||| |||||  || |||| |||| ||||||||| ||| ||||||| ||| ||| ||| ||||||||||||||||||||||    
T  39195139 ctctatattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaac 39195238  T
Q  496 tctt 499  Q
    ||||    
T  39195239 tctt 39195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 42853659 - 42853762
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  |||||||| |||| |||||||||| ||| |||||| ||||| || ||||  | || |||||||||||||||||||    
T  42853659 ctctctattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaac 42853758  T
Q  496 tctt 499  Q
    ||||    
T  42853759 tctt 42853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 27051075 - 27050973
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||||||||| ||||||  ||||| || |||| |||| ||||| |||  |||||||||||||| ||||||  ||  |||||||||||||||| |    
T  27051075 ctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatc 27050976  T
Q  496 tct 498  Q
    |||    
T  27050975 tct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 34616668 - 34616746
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||| || |||| |||||||||| |||  ||||| |||||||| ||| ||| ||||||||||||||||||||||||||    
T  34616668 caatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 38382428 - 38382506
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  38382428 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 47181948 - 47182026
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  47181948 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 48402161 - 48402083
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  48402161 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 26908031 - 26907970
Alignment:
Q  436 tttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||||||| ||||||||||| |||| |||||||||| || ||| |||||||||||||||||    
T  26908031 tttataaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 407 - 500
Target Start/End: Original strand, 29175318 - 29175411
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||| ||||||  ||||| || |||| |||| ||||| |||  |||||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  29175318 tttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 29175411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 15175645 - 15175729
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||| | ||||||| ||||||||| ||||| |||  |||| ||||||||| ||||||| || ||||||||||||| |||||||    
T  15175645 ttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 37997336 - 37997440
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  ||||||  |||||||| |||| |||| ||||| |||  |||| |||||| |||||||||| ||||||||||||||| |||| |    
T  37997336 ctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagc 37997435  T
Q  496 tcttt 500  Q
    |||||    
T  37997436 tcttt 37997440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 497
Target Start/End: Original strand, 46213045 - 46213153
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| | ||| ||||| |||||| | | ||||| ||||||||| ||||| |||  |||| ||||||||| ||||||| || ||| ||||||||    
T  46213045 actttttctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaata 46213144  T
Q  489 acacaactc 497  Q
    |||||||||    
T  46213145 acacaactc 46213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 56364019 - 56363931
Alignment:
Q  411 gcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||||||  |||||||| |||| |||||||||| |||  ||||| |||||||| |||  || || |||||||||||||||||||||||    
T  56364019 gcttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctt 56363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 10250504 - 10250401
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||| | |||| |||| ||||| |||  |||||||||||||| || |||| || ||||||||||||||||||     
T  10250504 ctctctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaat 10250405  T
Q  496 tctt 499  Q
    ||||    
T  10250404 tctt 10250401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 37297131 - 37297233
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||  ||||| |||  |||||||||||||| ||| ||| || |||||||||||||||||||    
T  37297131 ctctctattgctttggtttttgtgtcactacctcatttccttg-taaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaac 37297229  T
Q  496 tctt 499  Q
    ||||    
T  37297230 tctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 38510760 - 38510661
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||| | |||||||| |  |||| ||||||||||||||| ||| |||||||||||| ||||  |||| ||| ||||| ||||||||||||    
T  38510760 ctctctattgctttagtttttgtactaccaccttatttcctttataaaattttgattgtcacaaaaattat--catatataaatgttgaaataacacaac 38510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 494
Target Start/End: Complemental strand, 42396026 - 42395928
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||| ||||| ||||  |||||| | ||||||| ||||  ||| ||||||||||||| || ||||| |||||| |||  ||||||||||||||||||||    
T  42396026 ctctctattgctttgatttttgtgcaaatacctcattttttttgtaaaactttaattatctcaaaaattatcatataagtagatgttcaaataacacaa 42395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 11672078 - 11672009
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||| |||||||||| ||||| ||||||||||||| | | ||| |||||| ||||||||||||| |||||    
T  11672078 attttctttataaaattttaagtgtcacaaaagttgtaatataaatagattttcaaataacacatctctt 11672009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 19473952 - 19473841
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| || |||||||| ||||||  |||||| | |||| |||| ||||| ||| |||||| |||||||| ||| ||| ||  || ||||||||    
T  19473952 actttttctctctaatgttttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaata 19473853  T
Q  489 acacaactcttt 500  Q
    |||||| |||||    
T  19473852 acacaaatcttt 19473841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 27965122 - 27965169
Alignment:
Q  451 ttgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    |||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  27965122 ttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 31995903 - 31995836
Alignment:
Q  397 tctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagtt 464  Q
    ||||||||||||| | ||||||  |||||||| |||| |||| ||||| |||||||||| ||||||||    
T  31995903 tctttattgttttagtttttgtgtcaatacctcattttctttctaaaattttaattgtctcaaaagtt 31995836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 435 - 497
Target Start/End: Complemental strand, 5233620 - 5233558
Alignment:
Q  435 ctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||| ||||| ||| |||||  |||||||| | ||||| ||||||||||||||||||||||||    
T  5233620 ctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 11068804 - 11068874
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||||||| ||||| |||  ||| |||||||||| ||||||| ||  ||||||||||||||||| |||||    
T  11068804 atttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattcttt 11068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 499
Target Start/End: Complemental strand, 20692335 - 20692249
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||||| |||||||| ||||  ||||||||| |||||||| |  |||| |||||  ||| ||| |||||||||||||| |||||||    
T  20692335 ttttgtatcaatacctcattttttttataaaattttaattggcttaaaaattatcttataaatacatgttcaaataacaaaactctt 20692249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 491
Target Start/End: Original strand, 45083088 - 45083149
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataaca 491  Q
    |||| |||||||||| ||| ||||| | ||||||| ||||||| || |||||||||||||||    
T  45083088 attttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 19055748 - 19055644
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  ||||| || ||||||||| ||||| |||| |||||||||||||| ||||||| || |||||||||||||||||||    
T  19055748 ctctctattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 19055649  T
Q  496 tcttt 500  Q
    |||||    
T  19055648 tcttt 19055644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 45333793 - 45333891
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||||||||| ||||  ||||||  || ||||| ||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  45333793 ctctttattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 48470721 - 48470822
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| || ||| |||||| || ||||||||| ||||| ||| ||||||||||||||| ||||||| || |||||||||||||||||||    
T  48470721 ctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaac 48470820  T
Q  496 tc 497  Q
    ||    
T  48470821 tc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 27465046 - 27464943
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  27465046 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 27464947  T
Q  496 tctt 499  Q
    ||||    
T  27464946 tctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 502
Target Start/End: Complemental strand, 15470045 - 15469940
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||  | | ||||| ||||||||||||||| |||||||||||||||| |||||||||| ||  ||||||||||||||||||    
T  15470045 ctctctattgttttggtttttgcgctactacctcatttcctttataaaattttaattgtcacaaaa-ttatcacatatatgaatgttcaaataacacaac 15469947  T
Q  496 tctttct 502  Q
    || ||||    
T  15469946 tcattct 15469940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 33100890 - 33100992
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||  ||||||  || ||||| ||||||||||||||| |||  |||||||||||||| ||||||| ||  ||||||||||||||||||    
T  33100890 ctctctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 33100989  T
Q  496 tct 498  Q
    |||    
T  33100990 tct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 493
Target Start/End: Complemental strand, 40861240 - 40861154
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacaca 493  Q
    ||||| |||||| ||| || || ||||||||||||||| |||| ||||||||||||||  |||||| ||||||||||||||||||||    
T  40861240 tttggtttttgtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 23645493 - 23645598
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| | ||||| ||  |||||||||||||| |||    
T  23645493 ctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataac 23645592  T
Q  496 tctttc 501  Q
    ||||||    
T  23645593 tctttc 23645598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 649851 - 649955
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||| ||||| |||  |||||||||||||| |||||||  | |||||||||||||||||||    
T  649851 ctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaac 649950  T
Q  496 tcttt 500  Q
    |||||    
T  649951 tcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 31088263 - 31088366
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||  ||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  31088263 ctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 31088362  T
Q  496 tctt 499  Q
    ||||    
T  31088363 tctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 45121469 - 45121367
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||| | ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  45121469 ctctctattgctttggtttttgtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 45121371  T
Q  496 tctt 499  Q
    ||||    
T  45121370 tctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 30735254 - 30735180
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| |||| |||||||||| ||| |||||||||||| |||||||||| || ||| ||||||||||||||||||    
T  30735254 tacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 19947733 - 19947632
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| |||||||||  ||| |||||||||| |||  ||||| |||||||| ||| ||| ||| ||||||||||||||||||    
T  19947733 ctctctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaac 19947634  T
Q  496 tc 497  Q
    ||    
T  19947633 tc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 499
Target Start/End: Original strand, 21401490 - 21401583
Alignment:
Q  406 ttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||| ||||||  |||||||| |||| |||| ||||| ||| |||||  |||||||| ||||||| || |||||||||||||||||||||||    
T  21401490 ttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 26469469 - 26469542
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||||    
T  26469469 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 35369810 - 35369879
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacaca 493  Q
    ||||| ||||||||||||||| |||  |||||||||||||| ||||||| || |||||||||||||||||    
T  35369810 tacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 50726237 - 50726136
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||  |||||| ||| ||||| |||| ||||  |||| |||  ||||||||||| |||||||||| || |||||||||||||||||||    
T  50726237 ctctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaac 50726138  T
Q  496 tc 497  Q
    ||    
T  50726137 tc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 18434877 - 18434981
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||||||||  |||||| ||||||| | |||| ||||  |||| |||  |||||||||||||| |||  || |||||| |||||||||||||||    
T  18434877 ctctttattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaac 18434976  T
Q  496 tcttt 500  Q
    |||||    
T  18434977 tcttt 18434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 435 - 499
Target Start/End: Complemental strand, 30467483 - 30467419
Alignment:
Q  435 ctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||| |||||||||| |||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  30467483 ctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctt 30467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 491
Target Start/End: Original strand, 3851240 - 3851335
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataaca 491  Q
    |||| ||||||||||| |||| |  || ||||| ||||||||||||||| |||  |||||| ||||||| ||||||| || |||||||||||||||    
T  3851240 ctctctattgttttggtttttctgtcactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 37275017 - 37274918
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||| ||||| ||||||  || ||||| |||||||||  |||| ||| ||||||||||||||| ||||||  |  ||||||||||||||||||||||||    
T  37275017 tattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 10627799 - 10627697
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||  ||||||| |||||||  |||| |||||||||| |||  ||||| ||||| || ||||||||||| ||||| |||||||| |||    
T  10627799 ctctctattgttttgatttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgtcacatagatatatgttgaaataacagaac 10627700  T
Q  496 tct 498  Q
    |||    
T  10627699 tct 10627697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 46907302 - 46907380
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| ||| |||||| |||||||| ||  ||| || |||||||||||||||||||||||    
T  46907302 caatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctt 46907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 3982015 - 3981914
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| | ||||  ||||| || |||| |||| ||||| ||| ||||||||||| ||| ||||||  || |||||||||||||||||||    
T  3982015 ctctctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaac 3981916  T
Q  496 tc 497  Q
    ||    
T  3981915 tc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 44519140 - 44519039
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  |||||| | ||||||| ||||||||| ||||| |||  || ||||||||||| ||||||| ||  ||||||||||||||||||    
T  44519140 ctctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaac 44519041  T
Q  496 tc 497  Q
    ||    
T  44519040 tc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 505
Target Start/End: Complemental strand, 18512307 - 18512223
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttctttt 505  Q
    |||||||| |||| |||||||||| |||| |||||  |||| |||||| ||| || |||||| ||||||||||||||||| ||||    
T  18512307 caatacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactctttttttt 18512223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 37619643 - 37619727
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||| ||||||||| ||||||||| ||||| |||  |||| | ||||||| ||||||| || ||||||||||||||| |||||    
T  37619643 ttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 43775288 - 43775392
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||| | ||||||| ||||| || |||| |||| ||||| ||| ||||||| ||||||| ||||||| ||  || ||||||||||||||     
T  43775288 ctctctattgttttagtttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaag 43775387  T
Q  496 tcttt 500  Q
    |||||    
T  43775388 tcttt 43775392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 456 - 500
Target Start/End: Original strand, 45640443 - 45640487
Alignment:
Q  456 acaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  45640443 acaaaagttgtcacatatatagatgttcaaataacacaactcttt 45640487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 8828110 - 8828011
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||||||||| ||||| ||||||||| |||  ||||| ||||| || |||||| ||||  |||||||||||||||||    
T  8828110 ctctctattgctttggtttttgtgccaatacctcatttcttttataaaattttggttgtcgcaaaaattgtcacat-gata--tgttcaaataacacaac 8828014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 50932411 - 50932481
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataaca 491  Q
    |||||||| ||||||||| ||||| |||  |||| ||||||||| ||||||| || |||||||||||||||    
T  50932411 caatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 8350187 - 8350087
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||||||| ||||  |||  ||||||| |||||| ||||||| || |||||||||||||||||||    
T  8350187 ctctctattgctttggtttttgtgtcactaccttatttcctttgtaaat-tttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaac 8350089  T
Q  496 tc 497  Q
    ||    
T  8350088 tc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 37685439 - 37685512
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||| ||| ||||| |||||||||||||||| |||||||||  ||  |||||||||||||| |||||    
T  37685439 tacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37685512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 497
Target Start/End: Complemental strand, 37700079 - 37700006
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||| ||| ||||| |||||||||||||||| |||||||||  ||  |||||||||||||| |||||    
T  37700079 tacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 464
Target Start/End: Original strand, 4776855 - 4776906
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagtt 464  Q
    |||||| ||| ||||| ||||||||||||||| || ||||||||||||||||    
T  4776855 ttttgtgccactacctcatttcctttataaaatttaaattgtcacaaaagtt 4776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 52576291 - 52576188
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagat-agatgttcaaataacacaa 494  Q
    |||| ||||| ||||| |||||| ||  ||||| ||||||||| ||||| |||  |||||||||||||| |||| || || |  ||||||||||||||||    
T  52576291 ctctctattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaa 52576192  T
Q  495 ctct 498  Q
    ||||    
T  52576191 ctct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 497
Target Start/End: Complemental strand, 44914533 - 44914459
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaag-ttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||||| ||||| ||| |||||| |||||  || ||||||| || |||||||||||||||||||||    
T  44914533 tacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 497
Target Start/End: Original strand, 26207968 - 26208024
Alignment:
Q  441 aaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||| ||| ||| ||||||||||||| |  || ||||||||||||||||||||||||    
T  26207968 aaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 41677260 - 41677216
Alignment:
Q  461 agttatcacatagatagatgttcaaataacacaactctttctttt 505  Q
    |||| ||||||| || |||||||||||||||||||||||| ||||    
T  41677260 agttgtcacatatatggatgttcaaataacacaactctttttttt 41677216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 7e-23; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 407 - 502
Target Start/End: Complemental strand, 3937101 - 3937006
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttct 502  Q
    ||||| |||||| ||||||||| ||||||||||||||| |||  |||||||||||||| ||||||  || ||||||||||||||||||||||||||    
T  3937101 tttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactctttct 3937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 43025415 - 43025524
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| ||||| ||||| |||||| ||| || || ||||||||| ||||| |||| |||| ||||||||| ||||||| |||||||||| ||||    
T  43025415 actttttctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaata 43025514  T
Q  489 acacaactct 498  Q
    ||||||||||    
T  43025515 acacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 401 - 498
Target Start/End: Complemental strand, 24614300 - 24614203
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| ||||| ||||||  || ||||| ||||||||| ||||| ||| ||| ||||||||||||||||||| ||  |||||||||||||||||||||    
T  24614300 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 38956607 - 38956506
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  38956607 ctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 38956508  T
Q  496 tc 497  Q
    ||    
T  38956507 tc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 32529845 - 32529745
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||| ||||| |||| || || ||||| ||||||||| ||||| ||| |||||||||||| || ||||||| || |||| ||||||||||||||    
T  32529845 ctctttattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaac 32529746  T
Q  496 t 496  Q
    |    
T  32529745 t 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 48062139 - 48062242
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  |||||||| |||| |||||||||| ||| |||||| ||||| |||||||  | |  |||||||||||||||||||    
T  48062139 ctctctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaac 48062238  T
Q  496 tctt 499  Q
    ||||    
T  48062239 tctt 48062242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 7701651 - 7701729
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| ||||||||||||||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  7701651 caatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 40112943 - 40112841
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| ||| ||||||| | ||||| | ||||| || |||||||||||||||||||    
T  40112943 ctctctattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaac 40112844  T
Q  496 tct 498  Q
    |||    
T  40112843 tct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 41189532 - 41189428
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagata--gatgttcaaataacaca 493  Q
    |||| ||||| ||| | ||||||  |||||||| ||||||||| ||||| ||| ||||||| ||||||||||||||| |||   ||||||||||||||||    
T  41189532 ctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacaca 41189433  T
Q  494 actct 498  Q
    |||||    
T  41189432 actct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 44895561 - 44895460
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| | ||||| || ||||||||||||||| |||    
T  44895561 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataac 44895462  T
Q  496 tc 497  Q
    ||    
T  44895461 tc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 25192906 - 25192802
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  || ||||| |||| |||| ||||| |||| |||||||||||||| ||||||  ||  || |||||||||||||||    
T  25192906 ctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaac 25192807  T
Q  496 tcttt 500  Q
    |||||    
T  25192806 tcttt 25192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 41989731 - 41989628
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttat--aaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacaca 493  Q
    |||||||||| ||||| |||||| ||| ||||| ||||  ||| |  |||| |||  |||||||||||||||||||||| || |||||||||||||||||    
T  41989731 ctctttattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacaca 41989632  T
Q  494 actc 497  Q
    ||||    
T  41989631 actc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 46022231 - 46022153
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  46022231 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 502
Target Start/End: Original strand, 43942743 - 43942820
Alignment:
Q  425 acctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttct 502  Q
    |||| |||| |||| ||||| |||  ||| ||||||| |||||||||| || ||||||||||||||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactctttct 43942820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 496
Target Start/End: Complemental strand, 47391320 - 47391214
Alignment:
Q  390 cttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataa 489  Q
    ||||| |||||||||||||||  ||||||  |||||  | |||||||||||||||  || ||||||  ||||||||| ||||| ||  |||||||| |||    
T  47391320 ctttttctctttattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaactaa 47391221  T
Q  490 cacaact 496  Q
    |||||||    
T  47391220 cacaact 47391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 46578124 - 46578023
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  |||||| |||||||||  |||| ||||||||| |||  |||||| | || |||||||||| || ||||||||||||| |||||    
T  46578124 ctctctattgatttgatttttgtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataagacaac 46578025  T
Q  496 tc 497  Q
    ||    
T  46578024 tc 46578023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 491
Target Start/End: Complemental strand, 1504349 - 1504254
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataaca 491  Q
    |||| ||||||||||| ||| ||| ||||||||| ||| |||||||||  | | |||||| |||||||||||||  | || | |||||||||||||    
T  1504349 ctctctattgttttggttttcgtatcaatacctacttttctttataaatttatgattgtcccaaaagttatcaccaaaatggttgttcaaataaca 1504254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 498
Target Start/End: Complemental strand, 35628005 - 35627907
Alignment:
Q  400 ttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    |||||| ||||| ||||||  ||||||||  ||| |||||||||| | |  || || ||||||||||||   |||||| ||||||||||||||||||||    
T  35628005 ttattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatctcaaaagttatcaatcagatagttgttcaaataacacaactct 35627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 9428515 - 9428599
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||| ||| ||||||| |||| |||||| ||| ||| ||| ||  ||| ||||||| ||| ||| ||||||||||||||||||||    
T  9428515 ttttatacaaatacctcattttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaactc 9428599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 40417881 - 40417957
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||||| | || |||| ||||| |||  ||||| |||||||| ||  ||| ||||||||||||||||||||||||    
T  40417881 caatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 1671629 - 1671727
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||||||||| ||||||  || ||||| ||||||||| ||||| ||| ||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  1671629 tattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 407 - 501
Target Start/End: Complemental strand, 18258771 - 18258677
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttc 501  Q
    ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18258771 tttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttc 18258677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 26791233 - 26791130
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| || || ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  26791233 ctctctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 26791134  T
Q  496 tctt 499  Q
    ||||    
T  26791133 tctt 26791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 14051304 - 14051202
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||| ||| ||||| |||| |||| ||||| |||  |||||||||||||||||||||| || ||||||  |||||||||||    
T  14051304 ctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaac 14051205  T
Q  496 tct 498  Q
    |||    
T  14051204 tct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 22972199 - 22972304
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| |||||||  ||||||| |||| |||| ||||| |||| ||||| |||||||| | | ||| || |||||||||||||||||||    
T  22972199 ctctctattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaac 22972298  T
Q  496 tctttc 501  Q
    ||||||    
T  22972299 tctttc 22972304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 1764306 - 1764406
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||| ||||| |||| | ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| ||  ||||||||||||||||||    
T  1764306 ctctttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 1764405  T
Q  496 t 496  Q
    |    
T  1764406 t 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 497
Target Start/End: Original strand, 33037595 - 33037703
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| ||||| ||||  ||||||  || ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || ||||||||||||    
T  33037595 actttttctctctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaata 33037694  T
Q  489 acacaactc 497  Q
    |||||||||    
T  33037695 acacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 36739030 - 36739133
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| ||||| ||| ||||| |||  ||||||||||| |||||||||| || |||||||||||||||||||    
T  36739030 ctctctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaac 36739129  T
Q  496 tctt 499  Q
    ||||    
T  36739130 tctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 7287178 - 7287077
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  || ||||| |||| |||| ||||| |||  |||||||||||||| ||||||| ||  ||||||||||||||||||    
T  7287178 ctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaac 7287079  T
Q  496 tc 497  Q
    ||    
T  7287078 tc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 15479551 - 15479652
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| | || |  |||||||| ||||  ||| ||||| ||||||||||||||||||| ||||||  || |||||||||||||||||||    
T  15479551 ctctctattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaac 15479650  T
Q  496 tc 497  Q
    ||    
T  15479651 tc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 28306121 - 28306020
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| |||||  ||||| ||| ||||| |||| |||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  28306121 ctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 28306022  T
Q  496 tc 497  Q
    ||    
T  28306021 tc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 8686976 - 8687076
Alignment:
Q  399 tttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||||||||||| ||||||  |||||||| |||| |||| ||||| ||| ||||| | ||||||| ||||||| ||  ||||||||||||||| |||||    
T  8686976 tttattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactct 8687075  T
Q  499 t 499  Q
    |    
T  8687076 t 8687076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 28467437 - 28467338
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||||||||| ||||||  || | ||| ||||||||||||||| |||  ||||||||||| || ||||||| ||  ||||||| |||||||||||||||    
T  28467437 tattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactcttt 28467338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 2972406 - 2972504
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||| ||||| ||||  ||||||  |||||||| ||||||||  | ||| ||| ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  2972406 ctctctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 5168265 - 5168367
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  |||||| ||| ||||| |||| |||| ||||| |||| |||||||||||||| ||| ||| ||  ||||||||||||||||||    
T  5168265 ctctctattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaac 5168364  T
Q  496 tct 498  Q
    |||    
T  5168365 tct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 17626093 - 17626171
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  17626093 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 39591796 - 39591866
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||| |||| |||||||||  |||||||||| ||| ||| ||| |||||||||||||||||||||||||||    
T  39591796 attttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactcttt 39591866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 39592188 - 39592258
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||| |||| |||||||||  |||||||||| ||| ||| ||| |||||||||||||||||||||||||||    
T  39592188 attttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactcttt 39592258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 497
Target Start/End: Original strand, 41321348 - 41321438
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||| ||||||  |||||||| ||||||||| ||||| |||  ||||||||||| || ||||||| || ||| |||||||||||||||||    
T  41321348 tttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 407 - 496
Target Start/End: Original strand, 13168615 - 13168704
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    ||||| |||||| ||| || || ||||||||| ||||| ||| ||||||||||||||| ||||||| ||  ||||| |||||||||||||    
T  13168615 tttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 14923155 - 14923256
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||| ||| ||||| |||  || |||| |||||| ||||||| || |||||||||||||||||||    
T  14923155 ctctctattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaac 14923254  T
Q  496 tc 497  Q
    ||    
T  14923255 tc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 35634825 - 35634722
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaattt-cctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||| ||||||||||| |||||| ||||||  | |||| ||||| ||||| |||  || ||| ||||||| ||||||| || ||||||||||||||||||    
T  35634825 ctctctattgttttggtttttgtgccaataattcattttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaa 35634726  T
Q  495 ctct 498  Q
    ||||    
T  35634725 ctct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 496
Target Start/End: Original strand, 42175035 - 42175101
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    ||||||||||||||| ||| | ||||| |||||||  |||||| || ||||||||||||||||||||    
T  42175035 atttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 489
Target Start/End: Complemental strand, 7076557 - 7076464
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataa 489  Q
    |||| ||||| ||||| |||||| ||| ||| | ||||||||| ||||| |||  |||||||||||||| ||||||| ||  ||||||||||||    
T  7076557 ctctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 18660841 - 18660941
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||||||| | ||||||||| ||||| ||| ||||| ||||||||||| ||||| ||  |||||| ||||| |||||    
T  18660841 ctctctattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataatacaac 18660939  T
Q  496 tc 497  Q
    ||    
T  18660940 tc 18660941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 1274440 - 1274542
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  ||||| || ||| ||||| ||||| |||  ||| || ||||||| ||||||| || |||||||||||||||||||    
T  1274440 ctctctattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaac 1274538  T
Q  496 tctt 499  Q
    ||||    
T  1274539 tctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 1079936 - 1079879
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcaca 458  Q
    ||||| ||||| |||||| ||||||||| |||| |||| ||||| |||||||||||||    
T  1079936 tattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcaca 1079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 500
Target Start/End: Complemental strand, 7552901 - 7552852
Alignment:
Q  451 ttgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    |||||||||||||| |||  || || ||||||||||||||||||||||||    
T  7552901 ttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttt 7552852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 489
Target Start/End: Original strand, 27487969 - 27488062
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataa 489  Q
    |||| ||||| ||||| |||||| ||||||  |||||| |||| ||||| |||| || || ||||| |||||| | | ||||||||||||||||    
T  27487969 ctctctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttatctcaaaaattatcataaaaatagatgttcaaataa 27488062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 33655398 - 33655298
Alignment:
Q  401 tattgttttggcttttgtaccaa-tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||||||||| ||||||| ||| ||||| |||| |||||||||  | |  ||||  |||||||||||| | | |||| | |||||||||||||||||||    
T  33655398 tattgttttggtttttgtatcaaatacctcattttctttataaatttatggttgtaccaaaagttatcataaaaatagttattcaaataacacaactctt 33655299  T
Q  500 t 500  Q
    |    
T  33655298 t 33655298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 14818014 - 14818115
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||||||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||| ||| ||| ||||||||||||||||||    
T  14818014 ctctttattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaac 14818113  T
Q  496 tc 497  Q
    ||    
T  14818114 tc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 18737556 - 18737447
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||||||||| ||||||  |||||||| |||| |||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||| ||    
T  18737556 ctctttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacactac 18737457  T
Q  496 tctttctttt 505  Q
    | ||||||||    
T  18737456 tgtttctttt 18737447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 552875 - 552976
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  552875 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 552974  T
Q  496 tc 497  Q
    ||    
T  552975 tc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 494
Target Start/End: Complemental strand, 30423524 - 30423443
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    ||||||| |||||||| |||| ||||||||| |||| |||||  |||||||||||||||| |||||||||||||||||||||    
T  30423524 ttttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 407 - 498
Target Start/End: Original strand, 1156813 - 1156904
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| |||||| ||| || || |||||||||| |||| ||| ||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  1156813 tttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 32316917 - 32316815
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || ||||| |||| |||| ||||| |||  |||||||||||||| ||||||| || |||||||||||||||||||    
T  32316917 ctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 32316818  T
Q  496 tct 498  Q
    |||    
T  32316817 tct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 421 - 497
Target Start/End: Complemental strand, 13689958 - 13689882
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||||||| ||||||||||||||| |||| |||||  |||| || ||||||| || |||||||||||||||||||||    
T  13689958 caatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 33430340 - 33430244
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttctt 503  Q
    ||||| ||||||  || ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| ||  |||| |||||||||||||||||||||    
T  33430340 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactctttctt 33430244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 15974724 - 15974794
Alignment:
Q  430 atttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||||||| ||||| |||  |||||||||||||| | ||||| || ||||||||||||||||||||||||    
T  15974724 atttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 16199557 - 16199635
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    |||||||| |||| |||||||||| |||  ||||| |||||||| ||| ||| || |||||||||||||||||||||||    
T  16199557 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 34047469 - 34047574
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| |||||| ||  ||| |||| ||||| |||  |||||||||||||| ||||||  || ||||||||||||||| |||    
T  34047469 ctctctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaac 34047568  T
Q  496 tctttc 501  Q
    ||||||    
T  34047569 tctttc 34047574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 5694147 - 5694039
Alignment:
Q  389 acttttcctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaata 488  Q
    |||||| |||| ||||||||||  ||||||  |||||||| ||||||||| ||||| ||   ||||| |||||||| ||||||| ||  ||||| |||||    
T  5694147 actttttctctctattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaata 5694048  T
Q  489 acacaactc 497  Q
    |||||||||    
T  5694047 acacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 26595431 - 26595535
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  |||||||| |||| |||| ||||| |||  ||||  |||||||| ||| ||| || |||||||||||||||||||    
T  26595431 ctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaac 26595530  T
Q  496 tcttt 500  Q
    |||||    
T  26595531 tcttt 26595535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 4820449 - 4820552
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||  ||||||  |||| ||| |||| |||| ||||| ||| |||||| ||||||||||||  || |||| |||||||||||||||||    
T  4820449 ctctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaac 4820548  T
Q  496 tctt 499  Q
    ||||    
T  4820549 tctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 11612287 - 11612370
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    |||||| | ||||||| |||| |||| ||||| ||| ||| |||||||| |||||||||| ||| || ||||||||||||||||    
T  11612287 ttttgtgcaaatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 24900856 - 24900961
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| |||||  || |||| |||| ||||| |||||||||  |||| ||| ||| ||| |  |||||||||||||||||||    
T  24900856 ctctctattgctttggtttttgtgccaatcactcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaac 24900955  T
Q  496 tctttc 501  Q
    ||||||    
T  24900956 tctttc 24900961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 11014954 - 11014890
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaa 485  Q
    |||||||| |||| ||| |||||| ||| |||||| |||||||||||| ||| ||||||||||||    
T  11014954 caatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 31077881 - 31077977
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    ||||||||||| ||||||  || ||||| | ||||||| ||||| |||  |||||||||||||| ||||||  ||  || |||||||||||||||||    
T  31077881 tattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 17551367 - 17551267
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||||||||| ||||||  |||| ||| |||| |||||||||  |||  |||||||||| | | ||| | | ||||||||||||||||||||||    
T  17551367 ctctctattgttttggtttttgtgtcaatccctcattttctttataaat-tttggttgtcacaaatgctgtcataaaaatagatgttcaaataacacaac 17551269  T
Q  496 tc 497  Q
    ||    
T  17551268 tc 17551267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 32442537 - 32442593
Alignment:
Q  440 taaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaact 496  Q
    ||||| |||||||||| ||||| |||| | |||||| |||||| |||||||||||||    
T  32442537 taaaattttaattgtctcaaaaattatgatatagatggatgttgaaataacacaact 32442593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 76608 - 76504
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| |||  |||||||||||||| ||||||| || |||||| ||||||||||||    
T  76608 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaac 76509  T
Q  496 tcttt 500  Q
    |||||    
T  76508 tcttt 76504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 27325840 - 27325943
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| ||| ||||| ||||||||| ||||| ||| ||| |||| |||||| ||||||| || |||||||||||||||||||    
T  27325840 ctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaac 27325939  T
Q  496 tctt 499  Q
    ||||    
T  27325940 tctt 27325943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 37449409 - 37449310
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactcttt 500  Q
    ||||| ||||| |||||| | | ||||| ||||||||| ||||| ||| ||| ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  37449409 tattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactcttt 37449310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 4054275 - 4054174
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||||||||| ||||| ||||||  || ||||| ||||| ||| ||||  ||| ||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  4054275 ctctttattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaac 4054176  T
Q  496 tc 497  Q
    ||    
T  4054175 tc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 42768286 - 42768387
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || | ||| ||||||||| ||||| |||| ||||||||||| |||||||||| || |||||||||||||||||||    
T  42768286 ctctctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaac 42768385  T
Q  496 tc 497  Q
    ||    
T  42768386 tc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 36660439 - 36660339
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| | ||||  |||||| | |||| |||||||||| ||| ||||||||||||||||||||||  || |||||||||||||||||||    
T  36660439 ctctctattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaac 36660340  T
Q  496 t 496  Q
    |    
T  36660339 t 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 12898918 - 12898815
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||  ||| || || ||||||||| ||||| |||  |||||||||||||| ||||||| || ||||||||||||||| |||    
T  12898918 ctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataac 12898819  T
Q  496 tctt 499  Q
    ||||    
T  12898818 tctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 498
Target Start/End: Original strand, 34186700 - 34186791
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| ||||||  || ||||| |||||||||  |||| ||| ||||||||||||||| ||||||  || ||||||||||||||||||||||    
T  34186700 tttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 491
Target Start/End: Original strand, 36251436 - 36251503
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataaca 491  Q
    ||||| ||||||||| ||||| ||| |||||||| |||||||||||||| || |||||||||||||||    
T  36251436 tacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 498
Target Start/End: Original strand, 24479330 - 24479407
Alignment:
Q  421 caatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactct 498  Q
    ||||| || ||||||||| ||||| |||| |||||||||||||||||| ||| ||  ||| |||||||||||||||||    
T  24479330 caatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 10839466 - 10839368
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctt 499  Q
    ||||| ||||| |||||| ||||||  |||||| |||| ||||| |||| ||||| ||||| |||||| | | || |||||||||||||||| ||||||    
T  10839466 tattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactctt 10839368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 11253531 - 11253429
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  |||||||| |||| |||| ||||| |||  | |||||||||||| ||| ||  |||||||||||||||| |||||    
T  11253531 ctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaac 11253432  T
Q  496 tct 498  Q
    |||    
T  11253431 tct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 29025342 - 29025444
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  |||||||| |||| |||| ||||| |||  ||||| |||||||| ||| ||| || |||||| ||||||||||||    
T  29025342 ctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaac 29025441  T
Q  496 tct 498  Q
    |||    
T  29025442 tct 29025444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 32501157 - 32501087
Alignment:
Q  424 tacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    ||||| ||||||||| ||||| |||  ||||||||||| || ||||||| || ||||||||||||||||||    
T  32501157 tacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 22719522 - 22719623
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| |||||| | | ||||| |||| |||| ||||| |||  || ||||||||||| ||||||| || | |||||||||||||||||    
T  22719522 ctctctattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaac 22719621  T
Q  496 tc 497  Q
    ||    
T  22719622 tc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 494
Target Start/End: Complemental strand, 36816560 - 36816507
Alignment:
Q  441 aaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaa 494  Q
    |||| ||| ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  36816560 aaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 7271932 - 7272033
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  || || || ||||| |||  |||| ||| ||||||||||||||| ||||||  || |||||||| ||||||||||    
T  7271932 ctctctattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaac 7272031  T
Q  496 tc 497  Q
    ||    
T  7272032 tc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 489
Target Start/End: Original strand, 44415774 - 44415867
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataa 489  Q
    |||| ||||||||||| || ||||||||||  |||||| ||| |||||| |||| ||||| |||||||| |||   | || |||||||||||||    
T  44415774 ctctctattgttttggtttctgtaccaatatttaattttcttcataaaattttagttgtctcaaaagttgtcatgaaaattgatgttcaaataa 44415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 27854757 - 27854685
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatca 468  Q
    |||| ||||||||||  |||||| ||||||  |||||| |||| ||||| ||||||||||  |||||||||||    
T  27854757 ctctctattgttttgatttttgtgccaatatttaattttctttgtaaaattttaattgtcttaaaagttatca 27854685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 8761 - 8859
Alignment:
Q  407 tttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttctttt 505  Q
    ||||| ||||||  || ||||| ||||||||| ||||| |||  |||||| ||||||| ||| ||| || |||||||||||||||||||||||| ||||    
T  8761 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctttttttt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 49382 - 49478
Alignment:
Q  401 tattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactc 497  Q
    |||| |||||| ||||||  || ||||| ||||||||| ||||| |||  || ||||||||||| ||||||| || ||||||||||||||| |||||    
T  49382 tattattttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 11864 - 11966
Alignment:
Q  396 ctctttattgttttggcttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaac 495  Q
    |||| ||||| ||||| ||||||  |||||||| |||| |||| ||||| |||  | |||||||||||| ||| ||  |||||||||||||||| |||||    
T  11864 ctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaac 11963  T
Q  496 tct 498  Q
    |||    
T  11964 tct 11966  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 20873 - 20784
Alignment:
Q  413 ttttgtaccaatacctaatttcctttataaaactttaattgtcacaaaagttatcacatagatagatgttcaaataacacaactctttct 502  Q
    |||| ||||||||| |||||| | ||  |||| ||| ||| |||||||| ||||||  || || ||||||||||||||||||||||||||    
T  20873 ttttctaccaatacataattttccttgcaaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactctttct 20784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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