View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1637_high_18 (Length: 244)
Name: NF1637_high_18
Description: NF1637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1637_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 40514437 - 40514235
Alignment:
| Q |
19 |
agtatgacataacatttataagaaaatgaatcaatgaatgaatatacttctgcattacctatcttttgcttttcaatagcctccataggtgtggaggata |
118 |
Q |
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| T |
40514437 |
agtatgacataacatttataagaaaatgaatcaatgaatgaatatacttctgcattacctatcttttgcttttcaatagcctccataggtgtggaggata |
40514338 |
T |
|
| Q |
119 |
agttgcttgcagcagagggaaatgctttggaatatttctcactttaattggtgctccttccattttttgttggtgtatatatgtaagaaacttattttgt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40514337 |
agttgcttgcagcagagggaaatgctttggaatatttctcactttaattggtgctccttccattttttgttggtgtatatatgtaagaaacttattttgt |
40514238 |
T |
|
| Q |
219 |
tgt |
221 |
Q |
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||| |
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| T |
40514237 |
tgt |
40514235 |
T |
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