View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1637_low_15 (Length: 312)
Name: NF1637_low_15
Description: NF1637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1637_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 41308330 - 41308617
Alignment:
| Q |
9 |
gagatgaacacacatagatattgaaatggaacagagtaattatgcaaaaggggtgttttattgggggtgttggaagaaaacaccatgttctttgcatgca |
108 |
Q |
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| T |
41308330 |
gagaagaacacacatagatattgaaatggaacagagtaattatgcaaaaggggtgttttattgggggtgttggaagaaaacaccatgttctttgcatgca |
41308429 |
T |
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| Q |
109 |
acaaacactagtgaaagtgtgattagagagaaagaaggtacaaatcaagaacatgatttggaattaggtgttgatggaaaagatttgcttttgaaatcca |
208 |
Q |
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| T |
41308430 |
acaaacactagtgaaagtgtgattagagagaaagaaggtacaaatcaagaacatgatttggaattaggtgttgatggaaaagatttgcttttgaaatcca |
41308529 |
T |
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| Q |
209 |
atggtgaagaaagtttggaagtggaattgatgaggttgcataatctccctggtccaccaaggtttttgttcacaatcacagaagaaac |
296 |
Q |
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| T |
41308530 |
atggtgaagaaagtttggaagtagaattgatgaggttgcataatctccctggtccaccaaggtttttgttcacaatcacagaagaaac |
41308617 |
T |
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