View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1637_low_18 (Length: 254)
Name: NF1637_low_18
Description: NF1637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1637_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 51415126 - 51414898
Alignment:
| Q |
12 |
aaaggtaagaaaataaaagaaaaatcaaacaaactagaaagagaacatataaggtggaagatgatgagaagtcgaaagaacaagtgtcacactctcatnn |
111 |
Q |
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| T |
51415126 |
aaaggtaagaaaataaaagaaaaatcaaacaaactagaaagagaacatataaggtggaagatgatgagaagtcgaaagaacaagtgtcacactctcataa |
51415027 |
T |
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| Q |
112 |
nnnnnnntgataaacttgaattgagtattcaccacaagaataagaatgttcttaattaaatctaaagattgaattctcaatttgattgaaagcttatgnn |
211 |
Q |
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| T |
51415026 |
aaaaaatt-ataaatttgaattgagtattcaccacaagaataagaatgttcttaattaaatctaaagattgaattctcaatttgattgaaagcttatgaa |
51414928 |
T |
|
| Q |
212 |
nnnnnttaagactataaaaatgttatttat |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
51414927 |
aaaaattaagactataaaaatgttatttat |
51414898 |
T |
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