View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1647_high_4 (Length: 230)
Name: NF1647_high_4
Description: NF1647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1647_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 2445995 - 2446195
Alignment:
| Q |
4 |
tttttctctagctttaatttaagtgtaaaaactcaagtatttttaaaattaatctaattattgtaacacatccttaatattgtacatctgcctaaacatt |
103 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
2445995 |
tttttctctagctttaatttaagtgtaaaaaatcaagtatttttaaaattaatctaattattgtaacacatccttaatatggtacatctgcctaaacatt |
2446094 |
T |
|
| Q |
104 |
acatttccttctattgatattagagtctccttgatatatccacaaagcttgaagaaaaatatttaggtatagatatgactcattaacaaaattaattaca |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2446095 |
acatttccttctattgatattagagtctccttgatatatccacgaaggttgaagaaaaatatttaggtatagatatgactcattaacaaaattaattaca |
2446194 |
T |
|
| Q |
204 |
t |
204 |
Q |
| |
|
| |
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| T |
2446195 |
t |
2446195 |
T |
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