View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1681-Insertion-13 (Length: 594)

Name: NF1681-Insertion-13
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1681-Insertion-13
NF1681-Insertion-13
[»] chr4 (44 HSPs)
chr4 (345-594)||(10125761-10126010)
chr4 (130-346)||(10125263-10125479)
chr4 (462-590)||(52983677-52983811)
chr4 (462-557)||(25969545-25969639)
chr4 (456-557)||(45787747-45787849)
chr4 (462-557)||(20566408-20566504)
chr4 (468-557)||(13716493-13716583)
chr4 (462-590)||(34844763-34844897)
chr4 (462-590)||(40058857-40058991)
chr4 (456-531)||(18875586-18875661)
chr4 (462-531)||(12500128-12500197)
chr4 (462-590)||(27528800-27528934)
chr4 (462-528)||(37455635-37455700)
chr4 (367-456)||(25852215-25852304)
chr4 (462-557)||(32990493-32990589)
chr4 (462-557)||(34723857-34723953)
chr4 (358-407)||(52983611-52983660)
chr4 (476-524)||(9646293-9646341)
chr4 (462-556)||(20078028-20078123)
chr4 (367-443)||(42245747-42245823)
chr4 (464-557)||(13584297-13584391)
chr4 (462-528)||(25852272-25852338)
chr4 (464-527)||(41085086-41085149)
chr4 (462-531)||(9517711-9517780)
chr4 (462-531)||(32942428-32942497)
chr4 (462-590)||(32986255-32986389)
chr4 (458-531)||(33992680-33992753)
chr4 (462-524)||(39288917-39288978)
chr4 (480-557)||(55961797-55961874)
chr4 (370-407)||(4911926-4911963)
chr4 (8-52)||(10125175-10125217)
chr4 (371-456)||(13550213-13550298)
chr4 (358-407)||(46714384-46714433)
chr4 (370-407)||(51535617-51535654)
chr4 (462-557)||(54127385-54127481)
chr4 (367-456)||(54127449-54127538)
chr4 (367-407)||(5609358-5609398)
chr4 (367-407)||(20566350-20566390)
chr4 (368-456)||(27528902-27528990)
chr4 (367-407)||(32986198-32986238)
chr4 (367-407)||(34722171-34722211)
chr4 (367-407)||(34844914-34844954)
chr4 (367-407)||(40059008-40059048)
chr4 (367-407)||(41621752-41621792)
[»] chr5 (43 HSPs)
chr5 (463-557)||(19145455-19145549)
chr5 (462-594)||(38684266-38684403)
chr5 (462-590)||(19456216-19456348)
chr5 (462-590)||(27498736-27498870)
chr5 (462-557)||(15641148-15641244)
chr5 (462-557)||(32059483-32059579)
chr5 (462-556)||(15931117-15931211)
chr5 (462-528)||(2499251-2499317)
chr5 (462-590)||(8484666-8484800)
chr5 (370-456)||(31288053-31288139)
chr5 (367-452)||(4603778-4603863)
chr5 (463-590)||(7085631-7085764)
chr5 (462-590)||(11926506-11926641)
chr5 (462-557)||(24158209-24158305)
chr5 (367-407)||(25750767-25750807)
chr5 (464-557)||(4603837-4603931)
chr5 (464-558)||(36895485-36895580)
chr5 (480-522)||(10824038-10824080)
chr5 (462-590)||(18207265-18207399)
chr5 (370-456)||(33709608-33709694)
chr5 (462-531)||(34310200-34310269)
chr5 (367-404)||(19145570-19145607)
chr5 (462-557)||(30485886-30485982)
chr5 (367-456)||(32059547-32059636)
chr5 (462-530)||(37495105-37495173)
chr5 (367-456)||(38684209-38684298)
chr5 (513-590)||(41351109-41351191)
chr5 (367-407)||(1827686-1827726)
chr5 (367-407)||(8484817-8484857)
chr5 (501-568)||(10813882-10813950)
chr5 (462-557)||(11464951-11465046)
chr5 (367-407)||(13108605-13108645)
chr5 (367-407)||(22392702-22392742)
chr5 (464-535)||(23270588-23270659)
chr5 (367-407)||(23270678-23270718)
chr5 (367-407)||(25586933-25586973)
chr5 (462-529)||(25586990-25587057)
chr5 (367-423)||(28614624-28614679)
chr5 (469-528)||(31206307-31206367)
chr5 (367-407)||(36954819-36954859)
chr5 (367-407)||(38631117-38631157)
chr5 (367-407)||(42006794-42006834)
chr5 (462-553)||(42193543-42193633)
[»] chr8 (48 HSPs)
chr8 (458-557)||(2618244-2618344)
chr8 (456-590)||(8765531-8765671)
chr8 (462-590)||(34237660-34237794)
chr8 (462-590)||(4718707-4718841)
chr8 (458-557)||(24999292-24999392)
chr8 (456-557)||(25248405-25248505)
chr8 (462-557)||(39349318-39349414)
chr8 (458-557)||(18128571-18128671)
chr8 (368-456)||(28088292-28088380)
chr8 (465-557)||(20305973-20306066)
chr8 (465-557)||(21092606-21092699)
chr8 (462-590)||(21603292-21603426)
chr8 (462-568)||(14633016-14633124)
chr8 (462-531)||(28908885-28908954)
chr8 (368-456)||(41070767-41070855)
chr8 (462-551)||(15259455-15259545)
chr8 (462-531)||(3734693-3734762)
chr8 (462-590)||(28193536-28193670)
chr8 (367-456)||(3734730-3734819)
chr8 (513-557)||(4698766-4698811)
chr8 (462-557)||(6953050-6953146)
chr8 (464-557)||(12312910-12313003)
chr8 (462-557)||(20469979-20470075)
chr8 (367-456)||(27746442-27746531)
chr8 (367-456)||(42643225-42643314)
chr8 (477-528)||(589089-589140)
chr8 (477-528)||(624782-624833)
chr8 (462-531)||(24018444-24018513)
chr8 (462-528)||(26168922-26168987)
chr8 (462-550)||(34610737-34610826)
chr8 (462-531)||(42328066-42328135)
chr8 (367-456)||(264506-264595)
chr8 (367-456)||(651326-651415)
chr8 (367-456)||(837061-837150)
chr8 (462-499)||(11714921-11714958)
chr8 (358-407)||(18532103-18532152)
chr8 (480-557)||(20505633-20505710)
chr8 (462-535)||(22200626-22200699)
chr8 (367-456)||(28193479-28193568)
chr8 (367-456)||(34237762-34237851)
chr8 (471-524)||(34639284-34639337)
chr8 (367-407)||(2618191-2618231)
chr8 (367-407)||(4718650-4718690)
chr8 (367-407)||(8387600-8387640)
chr8 (367-407)||(19471614-19471654)
chr8 (367-407)||(19542538-19542578)
chr8 (367-407)||(19590118-19590158)
chr8 (367-407)||(34694732-34694772)
[»] chr6 (28 HSPs)
chr6 (462-557)||(9208310-9208406)
chr6 (464-590)||(21148516-21148647)
chr6 (462-590)||(3222641-3222774)
chr6 (462-557)||(654189-654285)
chr6 (462-557)||(21982363-21982459)
chr6 (462-590)||(1344993-1345127)
chr6 (462-586)||(11448929-11449059)
chr6 (462-590)||(15360103-15360237)
chr6 (462-590)||(34147404-34147538)
chr6 (462-590)||(34160020-34160154)
chr6 (462-557)||(12390483-12390579)
chr6 (462-557)||(17149499-17149595)
chr6 (367-407)||(28672068-28672108)
chr6 (462-531)||(12591695-12591764)
chr6 (458-590)||(28672121-28672259)
chr6 (462-557)||(5360114-5360210)
chr6 (367-456)||(15360205-15360294)
chr6 (482-557)||(22721775-22721851)
chr6 (358-456)||(9238967-9239065)
chr6 (367-404)||(8479313-8479350)
chr6 (462-531)||(10377773-10377842)
chr6 (367-456)||(12591638-12591727)
chr6 (480-557)||(17225743-17225820)
chr6 (480-528)||(6383948-6383996)
chr6 (367-407)||(11448872-11448912)
chr6 (367-407)||(22576068-22576108)
chr6 (367-407)||(34147347-34147387)
chr6 (367-407)||(34159963-34160003)
[»] chr3 (50 HSPs)
chr3 (462-557)||(1178230-1178325)
chr3 (462-590)||(46576406-46576540)
chr3 (467-568)||(1242036-1242139)
chr3 (462-590)||(8456155-8456289)
chr3 (462-557)||(35492969-35493065)
chr3 (462-590)||(52821641-52821774)
chr3 (462-590)||(53424182-53424315)
chr3 (462-557)||(15566543-15566638)
chr3 (464-557)||(34492618-34492712)
chr3 (367-456)||(7470322-7470411)
chr3 (462-557)||(18176930-18177026)
chr3 (462-557)||(21363001-21363097)
chr3 (501-558)||(24165757-24165813)
chr3 (462-557)||(25289757-25289853)
chr3 (462-557)||(40133492-40133588)
chr3 (462-557)||(45529797-45529893)
chr3 (462-557)||(7470259-7470354)
chr3 (367-407)||(18177043-18177083)
chr3 (462-556)||(26108350-26108445)
chr3 (367-454)||(21362944-21363031)
chr3 (462-557)||(30807195-30807292)
chr3 (462-557)||(50583050-50583145)
chr3 (462-590)||(8097284-8097418)
chr3 (370-456)||(15566606-15566692)
chr3 (367-457)||(30257625-30257715)
chr3 (465-557)||(45272459-45272552)
chr3 (462-590)||(49258267-49258401)
chr3 (501-590)||(54475779-54475873)
chr3 (367-456)||(7485632-7485721)
chr3 (367-456)||(40133556-40133645)
chr3 (367-456)||(48977389-48977478)
chr3 (462-557)||(48977446-48977542)
chr3 (462-557)||(53233953-53234049)
chr3 (367-456)||(53424283-53424372)
chr3 (367-407)||(4462634-4462674)
chr3 (367-450)||(25344170-25344253)
chr3 (462-590)||(10190747-10190881)
chr3 (462-590)||(30257682-30257816)
chr3 (370-456)||(32151428-32151514)
chr3 (462-557)||(2511340-2511436)
chr3 (367-404)||(4252555-4252592)
chr3 (367-456)||(25289821-25289910)
chr3 (367-456)||(30807260-30807349)
chr3 (367-456)||(35492912-35493001)
chr3 (380-457)||(49167070-49167147)
chr3 (367-407)||(25379762-25379802)
chr3 (367-407)||(34492731-34492771)
chr3 (367-407)||(45529910-45529950)
chr3 (367-407)||(46576349-46576389)
chr3 (367-407)||(52821791-52821831)
[»] chr2 (25 HSPs)
chr2 (462-557)||(8192395-8192490)
chr2 (462-590)||(33827578-33827712)
chr2 (462-529)||(3405224-3405291)
chr2 (462-557)||(19174821-19174916)
chr2 (464-549)||(45271444-45271530)
chr2 (462-590)||(35171858-35171992)
chr2 (367-456)||(15037960-15038049)
chr2 (462-557)||(15038017-15038113)
chr2 (462-557)||(10582035-10582129)
chr2 (462-557)||(24196062-24196156)
chr2 (462-556)||(17324824-17324918)
chr2 (462-557)||(44976196-44976293)
chr2 (462-528)||(4618758-4618824)
chr2 (462-557)||(5394075-5394171)
chr2 (462-531)||(18708535-18708604)
chr2 (501-590)||(11941215-11941309)
chr2 (462-590)||(44946058-44946192)
chr2 (501-568)||(3943838-3943906)
chr2 (358-407)||(18976581-18976630)
chr2 (458-511)||(28194223-28194276)
chr2 (462-557)||(30466873-30466969)
chr2 (462-557)||(36242355-36242451)
chr2 (367-456)||(41313993-41314082)
chr2 (367-456)||(44946160-44946249)
chr2 (367-407)||(14946780-14946820)
[»] chr7 (47 HSPs)
chr7 (462-557)||(654748-654843)
chr7 (456-557)||(21835207-21835309)
chr7 (462-590)||(22119950-22120084)
chr7 (462-590)||(40542915-40543049)
chr7 (462-557)||(7175905-7176001)
chr7 (462-590)||(2751333-2751467)
chr7 (462-590)||(7275339-7275473)
chr7 (462-531)||(23330809-23330878)
chr7 (462-557)||(29861732-29861828)
chr7 (462-557)||(28647031-28647127)
chr7 (367-410)||(1469117-1469160)
chr7 (456-527)||(8435769-8435840)
chr7 (464-557)||(17196993-17197087)
chr7 (462-531)||(21217903-21217972)
chr7 (462-557)||(2103117-2103213)
chr7 (367-456)||(2751276-2751365)
chr7 (462-557)||(10091250-10091346)
chr7 (462-557)||(22703548-22703644)
chr7 (367-407)||(28089821-28089861)
chr7 (464-557)||(9718030-9718124)
chr7 (462-528)||(1469174-1469240)
chr7 (462-531)||(18044169-18044238)
chr7 (367-409)||(38864600-38864642)
chr7 (358-456)||(40543017-40543115)
chr7 (367-456)||(7175969-7176058)
chr7 (367-456)||(7275282-7275371)
chr7 (371-456)||(9683835-9683920)
chr7 (462-557)||(11997911-11998007)
chr7 (367-456)||(22119893-22119982)
chr7 (513-557)||(22638401-22638446)
chr7 (458-568)||(22643373-22643485)
chr7 (462-557)||(27312214-27312310)
chr7 (367-456)||(32849596-32849685)
chr7 (462-530)||(41907584-41907652)
chr7 (367-407)||(2103060-2103100)
chr7 (367-407)||(2344304-2344344)
chr7 (468-528)||(7262285-7262345)
chr7 (367-407)||(8435851-8435891)
chr7 (367-407)||(13332579-13332619)
chr7 (367-407)||(17212058-17212098)
chr7 (367-407)||(18044112-18044152)
chr7 (367-407)||(21217989-21218029)
chr7 (367-407)||(22638297-22638337)
chr7 (367-407)||(23854401-23854441)
chr7 (367-407)||(25333424-25333464)
chr7 (367-407)||(27312157-27312197)
chr7 (367-407)||(42814869-42814909)
[»] chr1 (36 HSPs)
chr1 (462-568)||(32729603-32729710)
chr1 (462-590)||(4621242-4621376)
chr1 (462-590)||(24122081-24122215)
chr1 (462-557)||(24674451-24674547)
chr1 (367-456)||(46607811-46607900)
chr1 (462-520)||(1486476-1486534)
chr1 (462-586)||(7766736-7766866)
chr1 (462-535)||(9500421-9500494)
chr1 (462-557)||(8077705-8077801)
chr1 (462-557)||(15059445-15059541)
chr1 (462-530)||(7197318-7197385)
chr1 (367-407)||(47091691-47091731)
chr1 (462-557)||(16539666-16539761)
chr1 (462-521)||(16899561-16899620)
chr1 (513-590)||(8254757-8254840)
chr1 (462-520)||(19034467-19034525)
chr1 (462-531)||(23734174-23734243)
chr1 (462-531)||(23741366-23741435)
chr1 (462-520)||(25237070-25237128)
chr1 (462-531)||(27454936-27455005)
chr1 (371-456)||(1378903-1378988)
chr1 (367-456)||(4621344-4621433)
chr1 (462-557)||(17935827-17935923)
chr1 (367-456)||(24674394-24674483)
chr1 (462-557)||(30677234-30677330)
chr1 (462-557)||(46607868-46607964)
chr1 (367-407)||(2272345-2272385)
chr1 (367-407)||(7197402-7197442)
chr1 (367-407)||(8077648-8077688)
chr1 (379-407)||(10059068-10059096)
chr1 (367-407)||(18533880-18533920)
chr1 (367-459)||(20487294-20487386)
chr1 (480-520)||(20907342-20907382)
chr1 (367-407)||(34778343-34778383)
chr1 (367-407)||(37349524-37349564)
chr1 (367-407)||(52135131-52135171)
[»] scaffold0070 (1 HSPs)
scaffold0070 (462-557)||(40383-40479)
[»] scaffold0217 (1 HSPs)
scaffold0217 (456-557)||(7352-7454)
[»] scaffold0160 (1 HSPs)
scaffold0160 (458-541)||(29202-29285)
[»] scaffold0576 (2 HSPs)
scaffold0576 (462-590)||(5087-5221)
scaffold0576 (367-456)||(5189-5278)
[»] scaffold0019 (1 HSPs)
scaffold0019 (462-590)||(161867-162001)
[»] scaffold0026 (2 HSPs)
scaffold0026 (462-557)||(97409-97505)
scaffold0026 (367-456)||(97473-97562)
[»] scaffold0157 (1 HSPs)
scaffold0157 (462-531)||(20280-20349)
[»] scaffold0102 (1 HSPs)
scaffold0102 (464-590)||(39152-39284)
[»] scaffold0068 (1 HSPs)
scaffold0068 (367-407)||(41800-41840)
[»] scaffold0209 (1 HSPs)
scaffold0209 (477-528)||(30219-30270)
[»] scaffold0717 (1 HSPs)
scaffold0717 (462-531)||(28-97)
[»] scaffold0051 (1 HSPs)
scaffold0051 (462-531)||(52941-53010)
[»] scaffold1175 (1 HSPs)
scaffold1175 (501-557)||(2469-2525)
[»] scaffold0623 (1 HSPs)
scaffold0623 (367-407)||(1212-1252)
[»] scaffold0460 (1 HSPs)
scaffold0460 (367-459)||(8283-8375)
[»] scaffold0459 (2 HSPs)
scaffold0459 (462-557)||(10737-10832)
scaffold0459 (367-407)||(10849-10889)
[»] scaffold0366 (3 HSPs)
scaffold0366 (367-407)||(9455-9495)
scaffold0366 (462-557)||(12044-12139)
scaffold0366 (367-407)||(12156-12196)
[»] scaffold0199 (1 HSPs)
scaffold0199 (367-407)||(8563-8603)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 1e-95; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 345 - 594
Target Start/End: Original strand, 10125761 - 10126010
Alignment:
Q  345 taattattatttggcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgt 444  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  10125761 taataattatttggcaaccgagttggagttggcctagtggttgacttgggatcttggagtttgttcgtctcaagatctcgagcacgattccctctagtgt 10125860  T
Q  445 caatttcggtggatcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtg 544  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||  |||||||    
T  10125861 caatttcggtgggtcttaggtttgattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccctgcaagtg 10125960  T
Q  545 agcggtgggattgtccccttggatcgattcttgaatcagataccgatttt 594  Q
     || |||||||||||||||||||||| |||||||||||||||||||||||    
T  10125961 ggcagtgggattgtccccttggatcggttcttgaatcagataccgatttt 10126010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 130 - 346
Target Start/End: Original strand, 10125263 - 10125479
Alignment:
Q  130 aagtatattatggatagtgtcgtaaaaatagtaaggaatttttacaataattttggacgcaacacatttgagaatgtcatagnnnnnnnnagggggagaa 229  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||        ||||||||||    
T  10125263 aagtatattatgggtagtgtcgtaaaaatagtaaggaatttttacaataattttggacacaacaaatttgagaatgtcatagttttttttagggggagaa 10125362  T
Q  230 tgtcatagttaaaatacaatttgtatagaatatctaataatttgagaatgtcgtagttaaacctttttgtgtccgaaaattccaaaatttacaccaaaat 329  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10125363 tgtcatacttaaaatacaatttgtatagaatatctaataatttgagaatgtcgtagttagaccttttggtgtccgaaaattccaaaatttacaccaaaat 10125462  T
Q  330 gactagaatatctaata 346  Q
    |||||||||||||||||    
T  10125463 gactagaatatctaata 10125479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 52983677 - 52983811
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  52983677 aggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 52983775  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  52983776 cccctcggattagtcgattcttggatcggataccga 52983811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 25969639 - 25969545
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||| ||||||||||| ||||||||||  ||| |||| ||||||||| ||| |||||||||||||||||  || || ||||||||||||||||||    
T  25969639 aggttggattccccctggtgccaatttcggtggccaagtccatacagaactt-gctctggctttaaacgggcccccgtaagtgagcggtgggattg 25969545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 45787849 - 45787747
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtggg 553  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| ||  || ||||||||  |||||||    
T  45787849 gatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtggacggtggg 45787751  T
Q  554 attg 557  Q
    ||||    
T  45787750 attg 45787747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 20566408 - 20566504
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaagg-ccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||||| | ||||||||||||| ||||||||||||||||||| || |||||||| ||| ||||||||    
T  20566408 aggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcgctgggattg 20566504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 13716583 - 13716493
Alignment:
Q  468 gattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||  ||||||||||| |||||||| |||||| || ||||||| || |||||||| ||  ||||||||||| ||||||||||||    
T  13716583 gattccccctagtgccaatttcagtgggcaagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattg 13716493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 34844897 - 34844763
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  34844897 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 34844799  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  34844798 cccctcggattagtcgattcttggatcggataccga 34844763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 40058991 - 40058857
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  40058991 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 40058893  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  40058892 cccctcggattagtcgattcttggatcggataccga 40058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 456 - 531
Target Start/End: Complemental strand, 18875661 - 18875586
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||| ||||||||||||| |||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||||    
T  18875661 gatctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg 18875586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 12500197 - 12500128
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||| ||||||| ||| ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||    
T  12500197 aggtttgattccctctggtgccaatttcaatgggctaagtccatacatagc-ttgctctggctttaaacgg 12500128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 27528934 - 27528800
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||||||||| |||| | || |||||||| |||||| |||| ||    
T  27528934 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttatacggggcccccgcaagtgggcggtgagattggt 27528836  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  27528835 cccctcggattagtcgattcttggatcggataccga 27528800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 37455635 - 37455700
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    |||||||||||||| || ||||||||||||||||| |  ||||| |||| |||||||||||||||||    
T  37455635 aggttcgattcccc-tggtgccaatttcaatgggctaatccatatagagatttgctctggctttaaa 37455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 25852215 - 25852304
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  25852215 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 25852304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 32990493 - 32990589
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    |||||||||||||  |  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  32990493 aggttcgattccctttagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 32990589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 34723857 - 34723953
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||| ||| ||||||||||||||||||| | || |||||||| | ||||||||||    
T  34723857 aggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagc-ttgctctggctttaaacggggcccccgcaagtgggtggtgggattg 34723953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 52983611 - 52983660
Alignment:
Q  358 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  52983611 gcaacccatttggggttggcctagtggttggcttgagatcttggagtttg 52983660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 524
Target Start/End: Complemental strand, 9646341 - 9646293
Alignment:
Q  476 ctgatgccaatttcaatgggcaaggccatacagagctttgctctggctt 524  Q
    |||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  9646341 ctgatgacaatttcaatgggcaagttcatacagtgctttgctctggctt 9646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 20078123 - 20078028
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt 556  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || || ||||| |||||||||||    
T  20078123 aggtttgattcccactggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgtaagtgggcggtgggatt 20078028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 443
Target Start/End: Original strand, 42245747 - 42245823
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtg 443  Q
    ||||||||||| |||||||||||||| |||||| ||||||| || || |||| ||||| |  ||||||||| |||||    
T  42245747 ttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccctctagtg 42245823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 13584391 - 13584297
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| ||| || ||||||| |||||| ||| ||||| ||||||| ||||||||||||||||| | |||| ||| |||||||||| ||||    
T  13584391 gttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt-gctctggctttaaacggggccctcacaaatgagcggtggaattg 13584297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 25852272 - 25852338
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaa 528  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||    
T  25852272 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaa 25852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 41085086 - 41085149
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaa 527  Q
    ||||||||| | |||||||| ||||| |||| |||| ||||| ||||||||||||| |||||||    
T  41085086 gttcgattctctctgatgccgatttcgatggacaagtccatatagagctttgctctagctttaa 41085149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 9517780 - 9517711
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||| | ||| ||||||||||| ||||| ||| ||||||||||| |||||||| ||||||||||    
T  9517780 aggttcgattctctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctgactttaaacgg 9517711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 32942428 - 32942497
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||| | ||||||||||||||  ||||| ||| ||||||||||| || ||||||||||||||||    
T  32942428 aggttcgattctctctgatgccaatttcggtgggctaagtccatacagagc-ttactctggctttaaacgg 32942497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 32986255 - 32986389
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 558  Q
    |||||| |||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||| ||||||| || ||| | ||||||| ||||||||||| ||    
T  32986255 aggttcaattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattggt 32986353  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  32986354 cccctcggaatagtcgattcttggatcggataccga 32986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 33992680 - 33992753
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||||| | ||| ||||||||||  ||||| ||| ||||||| ||| |||||||||||||||||||    
T  33992680 tcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaacgg 33992753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 524
Target Start/End: Original strand, 39288917 - 39288978
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctt 524  Q
    |||||| |||||| |||||| |||||||  |||||||| ||||||||||| ||||||||||||    
T  39288917 aggttcaattcccactgatgtcaatttcggtgggcaagtccatacagagc-ttgctctggctt 39288978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 55961874 - 55961797
Alignment:
Q  480 tgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||  ||||| ||| ||||||||||||| |||||| |||||||||| ||| | |||||| ||||||||||||    
T  55961874 tgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggccccacaagtgggcggtgggattg 55961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 407
Target Start/End: Original strand, 4911926 - 4911963
Alignment:
Q  370 gggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  4911926 gggttggcttagtggttgacttaagatcttggagtttg 4911963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 10125175 - 10125217
Alignment:
Q  8 attttaggctcaaatcccagaatctctcattaactaacaacaaaa 52  Q
    |||||||||||||||||||||| |||||  |||||||||||||||    
T  10125175 attttaggctcaaatcccagaacctctc--taactaacaacaaaa 10125217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 13550213 - 13550298
Alignment:
Q  371 ggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||| |||||||||||||||||||| |||||||| || || | || ||||  ||   ||||||| ||||| ||||||||||||    
T  13550213 ggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgg 13550298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 46714384 - 46714433
Alignment:
Q  358 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  46714384 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttg 46714433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 407
Target Start/End: Original strand, 51535617 - 51535654
Alignment:
Q  370 gggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  51535617 gggttggcctagtggttgacttgggatcttggagtttg 51535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 54127481 - 54127385
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    |||||| |||||| ||  ||||||||||  ||||| ||| | ||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  54127481 aggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 54127385  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 54127538 - 54127449
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  | ||||||| | ||| ||||||||||||    
T  54127538 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgg 54127449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 5609398 - 5609358
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  5609398 ttggggttggcctagtggttggcttgggatcttggagtttg 5609358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 20566350 - 20566390
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  20566350 ttggggttggcctagtggttggcttgggatcttggagtttg 20566390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 456
Target Start/End: Complemental strand, 27528990 - 27528902
Alignment:
Q  368 tggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  27528990 tggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 27528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 32986198 - 32986238
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  32986198 ttggggttggcctagtggttggcttgggatcttggagtttg 32986238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 34722171 - 34722211
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  34722171 ttggggttggcttagtggttggcttgggatcttggagtttg 34722211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 34844954 - 34844914
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  34844954 ttggggttggcctagtggtttgcttgagatcttggagtttg 34844914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 40059048 - 40059008
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  40059048 ttggggttggcctagtggttggcttgggatcttggagtttg 40059008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 41621792 - 41621752
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| || |||||| |||||||||||||||||||    
T  41621792 ttggggttggcctaatggttggcttgagatcttggagtttg 41621752  T

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Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 557
Target Start/End: Complemental strand, 19145549 - 19145455
Alignment:
Q  463 ggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||||| ||| ||||||||||  |||||||| |||||||||||||||||||||||||||| ||  || |||||||| ||||||||||||    
T  19145549 ggttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattg 19145455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 594
Target Start/End: Original strand, 38684266 - 38684403
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 559  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||||||||||||||| |||    
T  38684266 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgagcggtgggattggtc 38684364  T
Q  560 cccttgga----tcgattcttgaatcagataccgatttt 594  Q
    |||| |||    |||||||||| ||| ||||||||||||    
T  38684365 ccctcggattagtcgattcttggatcggataccgatttt 38684403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 19456348 - 19456216
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 559  Q
    ||||||||| ||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||| |||    
T  19456348 aggttcgat-ccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattggtc 19456251  T
Q  560 cccttgga----tcgattcttgaatcagataccga 590  Q
    |||| |||    |||||||||| ||| ||||||||    
T  19456250 ccctcggattagtcgattcttggatcggataccga 19456216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 27498870 - 27498736
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||| ||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  27498870 aggttcgattccctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 27498772  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  27498771 cccctcggattagtcgattcttggatcggataccga 27498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 15641244 - 15641148
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| |||  |||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  15641244 aggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 15641148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 32059579 - 32059483
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||  ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  32059579 aggttcgattccttctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 32059483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 15931117 - 15931211
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt 556  Q
    ||||||||||||| ||| ||||||||||  |||  ||| |||||||||||  |||||||||||||||| | || |||||||||| |||||||||||    
T  15931117 aggttcgattccctctggtgccaatttcggtggctaagtccatacagagc-ctgctctggctttaaacagggctctcgcaagtgggcggtgggatt 15931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 2499317 - 2499251
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||||||||| ||||| || ||||||| ||||||||| ||||| ||||| || |||||||||||||    
T  2499317 aggttcgattctccctgttgtcaatttcgatgggcaagtccatatagagccttactctggctttaaa 2499251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 8484800 - 8484666
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||| ||||||| ||| ||||||||||  ||||| |||  |||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  8484800 aggtttgattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 8484702  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  8484701 cccctcggattagtcgattcttggatcggataccga 8484666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 456
Target Start/End: Complemental strand, 31288139 - 31288053
Alignment:
Q  370 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||||| ||| ||||||||||||    
T  31288139 gggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgg 31288053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 452
Target Start/End: Original strand, 4603778 - 4603863
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcg 452  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || ||||||||| ||  ||||||| | | ||| ||||||||    
T  4603778 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcg 4603863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 590
Target Start/End: Complemental strand, 7085764 - 7085631
Alignment:
Q  463 ggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-tc 559  Q
    |||||||||||| ||  || |||||||  ||||| ||| ||||||||||||| |||||| |||||||||| | || |||||||| |||||||||||| ||    
T  7085764 ggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggtccccgcaagtgggcggtgggattggtc 7085666  T
Q  560 cccttggat----cgattcttgaatcagataccga 590  Q
    |||| ||||    ||||||||||||| ||||||||    
T  7085665 ccctcggattagtcgattcttgaatcggataccga 7085631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 11926641 - 11926506
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag--cctcgcaagtgagcggtgggatt-g 557  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| |  || |||||||| | ||||||||| |    
T  11926641 aggttagattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggtggtgggattgg 11926543  T
Q  558 tccccttgga----tcgattcttgaatcagataccga 590  Q
    |||||| |||    |||||||||| ||| ||||||||    
T  11926542 tcccctcggattagtcgattcttggatcggataccga 11926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 24158305 - 24158209
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||||||  ||| || ||||||| ||||| ||| ||||||| |||||| |||||||||  ||||| ||||| ||||||| |||||| |||||    
T  24158305 aggttcgattccttctggtgtcaatttcgatgggtaagtccatacatagctttactctggcttagaacggggcctctgcaagtgggcggtgagattg 24158209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 25750807 - 25750767
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  25750807 ttggggttggcctagtggttgacttgggatcttggagtttg 25750767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 557
Target Start/End: Original strand, 4603837 - 4603931
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||||  ||| |||||||||| |||||| ||| ||||||||||||  ||||||||||||||||| ||| | |||||||  |||||||||||    
T  4603837 gttcgattccttctggtgccaatttcgatgggctaagtccatacagagctc-gctctggctttaaacggggcccctgcaagtggacggtgggattg 4603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 558
Target Start/End: Original strand, 36895485 - 36895580
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcc-tcgcaagtgagcggtgggattgt 558  Q
    ||||||||||| ||| | ||||||||  ||| |||| ||||||| ||||||||||||||||  |||| ||||  |||||||| |||| ||||||||    
T  36895485 gttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaacgtagccgccgcaagtgggcggggggattgt 36895580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 10824080 - 10824038
Alignment:
Q  480 tgccaatttcaatgggcaaggccatacagagctttgctctggc 522  Q
    |||||||||| ||||||||| || |||||||||||||||||||    
T  10824080 tgccaatttcgatgggcaagtccttacagagctttgctctggc 10824038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 18207265 - 18207399
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| | | ||||||||||  ||||| ||| ||||||||||||| | ||||||||||||||  ||| | ||||||| ||||||||||| ||    
T  18207265 aggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacgaggcccccgcaagtgggcggtgggattggt 18207363  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  18207364 cccctcggattagtcgattcttggatcggataccga 18207399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 456
Target Start/End: Complemental strand, 33709694 - 33709608
Alignment:
Q  370 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||| ||||||||| |||| |||||||||||||| || || | || |||| ||  ||||||||| | ||| ||||||||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 33709608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 34310200 - 34310269
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||| |||||||||   ||||| ||| ||||||||||| |||||||||||||||||||    
T  34310200 aggttcgattccctctggtgccaattttggtgggctaagtccatacagagc-ttgctctggctttaaacgg 34310269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 19145607 - 19145570
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagt 404  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  19145607 ttggggttggcctagtggttgacttgggatcttggagt 19145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 30485886 - 30485982
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| | ||| || |||||||  ||||| ||| ||||||||||||| ||||||||||||||||  | || |||||||| ||||||||||||    
T  30485886 aggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgatgcccccgcaagtgggcggtgggattg 30485982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 32059636 - 32059547
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||| | | ||| ||||||||||||    
T  32059636 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgg 32059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 530
Target Start/End: Original strand, 37495105 - 37495173
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacg 530  Q
    ||||||||||||| ||| |||||||||   ||||| ||| ||||||||||| ||||||||||||||||||    
T  37495105 aggttcgattccctctggtgccaattttggtgggctaagtccatacagagc-ttgctctggctttaaacg 37495173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 38684209 - 38684298
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||||||  ||||||||||||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  38684209 ttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 38684298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 590
Target Start/End: Complemental strand, 41351191 - 41351109
Alignment:
Q  513 ttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||||||||||||||||| ||  |||||||| ||||||||||| ||||||| |||    |||||||||| ||| ||||||||    
T  41351191 ttgctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 41351109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 1827726 - 1827686
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||| | ||||||||| |||||||||||||||||||    
T  1827726 ttggggttgacctagtggttggcttgagatcttggagtttg 1827686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 8484857 - 8484817
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  8484857 ttggggttggcctagtggttggcttgggatcttggagtttg 8484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 568
Target Start/End: Complemental strand, 10813950 - 10813882
Alignment:
Q  501 ccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtggga-ttgtccccttggat 568  Q
    |||||| |||||||||||||||||||||| | ||| | |||||  | ||||||| ||||||||||||||    
T  10813950 ccatacggagctttgctctggctttaaacagggccccacaagtaggtggtgggatttgtccccttggat 10813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 11465046 - 11464951
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||| || ||| |||||||||   ||||| |||  ||||||||||||  |||||||||||||||| ||| |||||||| | ||||||||||    
T  11465046 aggttcgatttcctctggtgccaattttggtgggctaagttcatacagagctta-ctctggctttaaacggggccccgcaagtgggtggtgggattg 11464951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 13108645 - 13108605
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  13108645 ttggggttggcctagtggttggcttgggatcttggagtttg 13108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 22392702 - 22392742
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  22392702 ttggggttggcctagtggttggcttgggatcttggagtttg 22392742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 535
Target Start/End: Complemental strand, 23270659 - 23270588
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc 535  Q
    |||||||| || | ||||||||||||  ||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  23270659 gttcgatttcctccgatgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcc 23270588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 23270718 - 23270678
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  23270718 ttggggttggcctagtggttggcttgggatcttggagtttg 23270678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 25586933 - 25586973
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  25586933 ttggggttggcctagtggttggcttgggatcttggagtttg 25586973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 25586990 - 25587057
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac 529  Q
    |||||||||| || ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||    
T  25586990 aggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaac 25587057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 28614679 - 28614624
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctc 423  Q
    |||||||||| | |||||||| ||||||||||| |||||||||| || |||||||||    
T  28614679 ttggggttggtg-agtggttggcttgagatcttagagtttgttcctccaaagatctc 28614624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 31206307 - 31206367
Alignment:
Q  469 attccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaa 528  Q
    |||||||||| ||||||||||| ||| | ||| |||||||||||| |||||| ||||||||    
T  31206307 attccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaa 31206367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 36954819 - 36954859
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  36954819 ttggggttggcctagtggttgccttgggatcttggagtttg 36954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 38631157 - 38631117
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  38631157 ttggggttggcctagtggttggcttgggatcttggagtttg 38631117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 42006794 - 42006834
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||  ||||||||| |||||||||||||||||||    
T  42006794 ttggggttgggctagtggttggcttgagatcttggagtttg 42006834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 553
Target Start/End: Original strand, 42193543 - 42193633
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtggg 553  Q
    |||||||||| || ||||||||||||||  ||||| ||| | |||||||| |||||| |||||||||| ||| || |||||||| ||||||||    
T  42193543 aggttcgatttcctctgatgccaatttcggtgggctaagtctatacagag-tttgctttggctttaaatgga-ccccgcaagtgggcggtggg 42193633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 458 - 557
Target Start/End: Original strand, 2618244 - 2618344
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggat 555  Q
    |||| |||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||    
T  2618244 tcttgggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcggtgggat 2618342  T
Q  556 tg 557  Q
    ||    
T  2618343 tg 2618344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 590
Target Start/End: Complemental strand, 8765671 - 8765531
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtggg 553  Q
    ||||| ||||||||||||| ||| |||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| || | |||||||| ||||||||    
T  8765671 gatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtggg 8765573  T
Q  554 att-gtccccttgga----tcgattcttgaatcagataccga 590  Q
    ||| ||||||| |||    |||||||||| ||| ||||||||    
T  8765572 attggtcccctcggattagtcgattcttggatcggataccga 8765531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 34237794 - 34237660
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||| ||    
T  34237794 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgagcggtgggattggt 34237696  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  34237695 cccctcggattagtcgattcttggatcggataccga 34237660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 4718707 - 4718841
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  4718707 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 4718805  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  4718806 cccctcggattagtcgattcttggatcggataccga 4718841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 557
Target Start/End: Original strand, 24999292 - 24999392
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggat 555  Q
    ||||||||||||||||| |||||||||||||  |||||| |||  |||| ||||| ||||||||||||||||||| | || |||||||| ||||||||||    
T  24999292 tcttaggttcgattccctctgatgccaattttgatgggctaagttcatatagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggat 24999390  T
Q  556 tg 557  Q
    ||    
T  24999391 tg 24999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 557
Target Start/End: Original strand, 25248405 - 25248505
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggat 555  Q
    ||||| ||||||||||||| ||| || |||||||  | ||| | | ||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||    
T  25248405 gatctcaggttcgattccctctggtgtcaatttcggtaggctaagtcatacagag-tttgctctggctttaaacgggccctcgcaagtgggcggtgggat 25248503  T
Q  556 tg 557  Q
    ||    
T  25248504 tg 25248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 39349318 - 39349414
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  39349318 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 39349414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 557
Target Start/End: Original strand, 18128571 - 18128671
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt 556  Q
    |||||| |||||||| | ||| ||||||||||  ||||| |  ||||| ||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  18128571 tcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 18128670  T
Q  557 g 557  Q
    |    
T  18128671 g 18128671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 28088292 - 28088380
Alignment:
Q  368 tggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||||| |||||||||||||| ||||||||||||||||| || | || ||||     ||||||||||| ||||||||||||||||    
T  28088292 tggggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgg 28088380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 465 - 557
Target Start/End: Original strand, 20305973 - 20306066
Alignment:
Q  465 ttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||  ||| |||||||||| |||||| ||| ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  20305973 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattg 20306066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 465 - 557
Target Start/End: Original strand, 21092606 - 21092699
Alignment:
Q  465 ttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||  ||| |||||||||| |||||| ||| ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  21092606 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattg 21092699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 21603292 - 21603426
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    |||||||||||||  || ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  21603292 aggttcgattccctatggtgccaatttcggtgggctaagcccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 21603390  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  21603391 cccctcggattagtcgattcttggatcggataccga 21603426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 568
Target Start/End: Original strand, 14633016 - 14633124
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcct-cgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| | ||||||||| ||||||||||||| |||||||| | | |||||| ||||||||||| ||    
T  14633016 aggttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctggctttgaacggagcgtccacaagtgggcggtgggattggt 14633114  T
Q  559 ccccttggat 568  Q
    ||||||||||    
T  14633115 ccccttggat 14633124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 28908885 - 28908954
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 531  Q
    |||||| |||||| ||| || ||||| || |||||||| ||||||||||||||| |||||||||||||||    
T  28908885 aggttcaattccctctggtgtcaattacagtgggcaagtccatacagagctttgttctggctttaaacgg 28908954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 41070767 - 41070855
Alignment:
Q  368 tggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||||| |||||||||||||| ||||||||||| || |  ||  ||| |||| ||  ||||||||||| ||||||||||||||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgg 41070855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 551
Target Start/End: Complemental strand, 15259545 - 15259455
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtg 551  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||    
T  15259545 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtg 15259455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 3734762 - 3734693
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||||||||||||||    
T  3734762 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg 3734693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 28193536 - 28193670
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatggg-caaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||  ||| ||||||||||| ||||||||||||||||||| ||| |  |||||| ||||||||||| ||    
T  28193536 aggttcgattccctctggtgccaatttcggtgggttaagtccatacagagc-ttgctctggctttaaacggggcccctacaagtgggcggtgggattggt 28193634  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  28193635 cccctcggattagtcgattcttggatcggataccga 28193670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 3734819 - 3734730
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  3734819 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 3734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 4698811 - 4698766
Alignment:
Q  513 ttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  4698811 ttgctctggctttaaacggagcccccgcaagtgagcggtgggattg 4698766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 6953146 - 6953050
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||  ||||||||||||    
T  6953146 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagttggcggtgggattg 6953050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 557
Target Start/End: Original strand, 12312910 - 12313003
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||| || ||| |||||||||  ||||||||||||| ||| ||||||| | |||||||||| ||  || | |||||| ||||||||||||    
T  12312910 gttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttgatttggctttaaatgggcccccacaagtgggcggtgggattg 12313003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 20469979 - 20470075
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||   ||||||||  |||||| ||| ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  20469979 aggttcgattccctctagagccaatttagatgggctaagtccatacagagctt-gctctggctttaaacagagcccccgcaagtgggcggtgggattg 20470075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 27746531 - 27746442
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| |||||||||  ||| |||||||||||||| || || |||| ||||  |  ||||||||||| ||| ||||||||||||    
T  27746531 ttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgg 27746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 42643314 - 42643225
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || | || ||||     ||||||||| ||||| ||||||||||||    
T  42643314 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgg 42643225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 528
Target Start/End: Complemental strand, 589140 - 589089
Alignment:
Q  477 tgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  589140 tgatgtcaatttcaatggacaagtccatatagagctttgctctggctataaa 589089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 528
Target Start/End: Original strand, 624782 - 624833
Alignment:
Q  477 tgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  624782 tgatgtcaatttcaatggacaagtccatatagagctttgctctggctataaa 624833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 24018444 - 24018513
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    |||||||||| || || ||| |||||||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  24018444 aggttcgatttcctctaatgtcaatttcagtgggctaagtccatacagagctt-gctctggctttaaacgg 24018513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 26168987 - 26168922
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||| |||||| |||||||||||||||  ||||||||  |||||||||| ||| ||||||||||||    
T  26168987 aggtttgattcctcctgatgccaatttcggtgggcaagttcatacagagc-ttgttctggctttaaa 26168922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 34610826 - 34610737
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacg-gagcctcgcaagtgagcggt 550  Q
    ||||||||||||| ||||||||||||||  ||| | ||| | ||||||||| |||||||||||||||||| |  ||||||||||| |||||    
T  34610826 aggttcgattccctctgatgccaatttcggtggtctaagtctatacagagc-ttgctctggctttaaacgagcccctcgcaagtgggcggt 34610737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 42328066 - 42328135
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||    
T  42328066 aggtttgattccctctgttgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgg 42328135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 264595 - 264506
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||| |||||| ||||||||| |||| |||||| ||||||| || || | |||||||  |  ||||||||| ||||| ||||||||||||    
T  264595 ttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgg 264506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 651326 - 651415
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||| |||||| ||||||||| |||| |||||| ||||||| || || | |||||||  |  ||||||||| ||||| ||||||||||||    
T  651326 ttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgg 651415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 837061 - 837150
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||| |||||| ||||||||| |||| |||||| ||||||| || || | |||||||  |  ||||||||| ||||| ||||||||||||    
T  837061 ttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgg 837150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 11714958 - 11714921
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaag 499  Q
    |||||||||||||||||||||||||||||  |||||||    
T  11714958 aggttcgattccccctgatgccaatttcagcgggcaag 11714921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 18532103 - 18532152
Alignment:
Q  358 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  18532103 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttg 18532152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 20505633 - 20505710
Alignment:
Q  480 tgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||||  ||||||| ||||||| ||||||| | ||||||||||  | ||  |||||||| ||||||||||||    
T  20505633 tgccaatttcagcgggcaagtccatacaaagctttgttttggctttaaatagggcaccgcaagtgggcggtgggattg 20505710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 22200699 - 22200626
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcc 535  Q
    ||||||||||||| ||  |||||||||| | ||  |||  |||||||||||||||||||||||  |||||||||    
T  22200699 aggttcgattccctctagtgccaatttcgagggaaaagttcatacagagctttgctctggcttagaacggagcc 22200626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 28193479 - 28193568
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  28193479 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 28193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 34237851 - 34237762
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  34237851 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 34237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 524
Target Start/End: Complemental strand, 34639337 - 34639284
Alignment:
Q  471 tccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctt 524  Q
    |||| ||| ||||||||||  |||| ||| ||||||||||||||||||||||||    
T  34639337 tccctctggtgccaatttcggtgggtaagtccatacagagctttgctctggctt 34639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 2618191 - 2618231
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  2618191 ttggggttggcctagtggttggcttgggatcttggagtttg 2618231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 4718650 - 4718690
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  4718650 ttggggttggcctagtggttggcttgggatcttggagtttg 4718690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 8387640 - 8387600
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| ||||||||||| |||||||    
T  8387640 ttggggttggcctagtggttgtcttgagatcttagagtttg 8387600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 19471614 - 19471654
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  19471614 ttggggttggcctagtggttggcttgggatcttggagtttg 19471654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 19542538 - 19542578
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  19542538 ttggggttggcctagtggttggcttgggatcttggagtttg 19542578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 19590158 - 19590118
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  19590158 ttggggttggcctagtggttggcttgggatcttggagtttg 19590118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 34694772 - 34694732
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||  |||||||||||||| ||||||||||||||    
T  34694772 ttggggttggtctagtggttgacttgtgatcttggagtttg 34694732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 9208310 - 9208406
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||||||| ||||||||||  |||||||| ||||||||||| ||||| |||||||||| || | || |||||||| ||||||||||||    
T  9208310 aggttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattg 9208406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 464 - 590
Target Start/End: Complemental strand, 21148647 - 21148516
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtccc 561  Q
    ||||||||||| ||  |||||||||| |||||| ||| ||||||||||||| |||||| |||||||||| ||| |||||||| ||||||||||| |||||    
T  21148647 gttcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacggggccccgcaagtgggcggtgggattggtccc 21148549  T
Q  562 cttgga----tcgattcttgaatcagataccga 590  Q
    || |||    |||||||||||||| ||||||||    
T  21148548 ctcggattagtcgattcttgaatcggataccga 21148516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 3222774 - 3222641
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 559  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||| |||||||||| ||| |||||||| ||||||||||| |||    
T  3222774 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgtctttaaacggggccccgcaagtgggcggtgggattggtc 3222676  T
Q  560 cccttgga----tcgattcttgaatcagataccga 590  Q
    |||| |||    |||||||||| ||| ||||||||    
T  3222675 ccctcggattagtcgattcttggatcggataccga 3222641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 654285 - 654189
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| || | |||||||| ||||||||||||    
T  654285 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtgggattg 654189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 21982459 - 21982363
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    |||||||||||||  || ||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  21982459 aggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 21982363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 1344993 - 1345127
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||| ||||| ||| ||||||| ||| ||||||||||||||||| ||  || ||||||||  |||||||||| ||    
T  1344993 aggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagc-ttgctctggctttaaacgggccccccgcaagtggacggtgggattggt 1345091  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    |||||||||    |||||||||| ||| ||||||||    
T  1345092 ccccttggattagtcgattcttggatcggataccga 1345127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 586
Target Start/End: Original strand, 11448929 - 11449059
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  11448929 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 11449027  T
Q  559 ccccttgga----tcgattcttgaatcagata 586  Q
    ||||| |||    |||||||||||||| ||||    
T  11449028 cccctcggattagtcgattcttgaatcggata 11449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 15360237 - 15360103
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || ||||| || ||||||||||| ||    
T  15360237 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggt 15360139  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  15360138 cccctcggattagtcgattcttggatcggataccga 15360103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 34147404 - 34147538
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  34147404 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggccccccgcaagtgggcggtgggattggt 34147502  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  34147503 cccctcggattagtcgattcttggatcggataccga 34147538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 34160020 - 34160154
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  34160020 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggccccccgcaagtgggcggtgggattggt 34160118  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  34160119 cccctcggattagtcgattcttggatcggataccga 34160154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 12390483 - 12390579
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||||    
T  12390483 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattg 12390579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 17149595 - 17149499
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||| ||||||  | |||||| ||||||||||| ||||| |||||||||| || | || ||||||||| |||||||||||    
T  17149595 aggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattg 17149499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 28672068 - 28672108
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28672068 ttggggttggcctagtggttgacttgagatcttggagtttg 28672108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 12591695 - 12591764
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||  ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||    
T  12591695 aggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacgg 12591764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 590
Target Start/End: Original strand, 28672121 - 28672259
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc-tcgcaagtgagcggtgggat 555  Q
    ||||||||||||||||| ||| || ||||||   ||||| ||| ||||||||||||| | | |||||||||||||  || ||||||||| ||||||||||    
T  28672121 tcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagctt-gttttggctttaaacgggcccctcgcaagtgggcggtgggat 28672219  T
Q  556 t-gtccccttgga----tcgattcttgaatcagataccga 590  Q
    | ||||||| |||    |||||||||| ||||||||||||    
T  28672220 tggtcccctcggattagtcgattcttggatcagataccga 28672259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 5360210 - 5360114
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| || |||||||||||  ||||| ||| ||||||||||| |||||||| |||||||||| | || | |||||| ||||||||||||    
T  5360210 aggttcgattccctctaatgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacggaacccccacaagtgggcggtgggattg 5360114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 15360294 - 15360205
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  15360294 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 15360205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 22721775 - 22721851
Alignment:
Q  482 ccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||| |||||| |  |||||| || |||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  22721775 ccaatttcattgggcaggttcatacaaagttttgttctggctttaaacagagcccctgcaagtgagcggtgggattg 22721851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 9238967 - 9239065
Alignment:
Q  358 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||| | ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  9238967 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 9239065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 404
Target Start/End: Original strand, 8479313 - 8479350
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagt 404  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8479313 ttggggttggcctagtggttgacttgggatcttggagt 8479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 10377773 - 10377842
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 531  Q
    |||||| ||||||  || ||||||||||  |||||||| ||||||| |||||||||||| ||| ||||||    
T  10377773 aggttcaattccctatggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacgg 10377842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 12591638 - 12591727
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||| ||||    
T  12591638 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgg 12591727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 17225743 - 17225820
Alignment:
Q  480 tgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||   ||||||| ||||||||||||||||||| | ||  ||||| ||| ||||| || ||||||||||||    
T  17225743 tgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacggggccccgcaaatgggcggtgggattg 17225820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 528
Target Start/End: Complemental strand, 6383996 - 6383948
Alignment:
Q  480 tgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||||||||| ||||| || ||||| ||||||||||| ||||||||||    
T  6383996 tgccaatttcagtgggctagtccataaagagctttgctttggctttaaa 6383948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 11448872 - 11448912
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  11448872 ttggggttggcctagtggttggcttgggatcttggagtttg 11448912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 22576068 - 22576108
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  22576068 ttggggttggcctagtggttggcttgggatcttggagtttg 22576108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 34147347 - 34147387
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  34147347 ttggggttggcctagtggttggcttgggatcttggagtttg 34147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 34159963 - 34160003
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  34159963 ttggggttggcctagtggttggcttgggatcttggagtttg 34160003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 1178230 - 1178325
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| ||||| ||||||||||  |||||||| ||||||||| |||||||||||||||||| || ||| | || ||| ||||||||||||    
T  1178230 aggttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggggccccacacgtgggcggtgggattg 1178325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 46576406 - 46576540
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||| ||||| ||    
T  46576406 aggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtcggattggt 46576504  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    |||||||||    |||||||||| ||| ||||||||    
T  46576505 ccccttggattagtcgattcttggatcggataccga 46576540  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 568
Target Start/End: Original strand, 1242036 - 1242139
Alignment:
Q  467 cgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtcccctt 564  Q
    |||||||| ||| |||||||||   ||||| ||| ||||||||||||||||||||||||||||||| | | |||||||| ||||||| ||| ||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtcccctt 1242135  T
Q  565 ggat 568  Q
    ||||    
T  1242136 ggat 1242139  T

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Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 8456289 - 8456155
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| || |||||||| ||    
T  8456289 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcagtgggattggt 8456191  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||||||| ||||||||    
T  8456190 cccctcggattagtcgattcttgaatcggataccga 8456155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 35492969 - 35493065
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  35492969 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 35493065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 52821774 - 52821641
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 559  Q
    ||||||||||||| ||| ||||||||||  || || ||| ||||||||||||| ||||||||||||||||| ||| || ||||| ||||||||||| |||    
T  52821774 aggttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggccccgtaagtgggcggtgggattggtc 52821676  T
Q  560 cccttgga----tcgattcttgaatcagataccga 590  Q
    |||| |||    |||||||||| ||| ||||||||    
T  52821675 ccctcggattagtcgattcttggatcggataccga 52821641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 53424315 - 53424182
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 559  Q
    |||||||||||||  || ||||||||||  ||||| ||| |||||||||| |||||| |||||||||||||  || |||||||||||||||||||| |||    
T  53424315 aggttcgattccctttggtgccaatttcggtgggctaagtccatacagag-tttgctatggctttaaacgggcccccgcaagtgagcggtgggattggtc 53424217  T
Q  560 cccttgga----tcgattcttgaatcagataccga 590  Q
    |||| |||    |||||||||| ||| ||||||||    
T  53424216 ccctcggattagtcgattcttggatcggataccga 53424182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 15566638 - 15566543
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||| ||||||||||||    
T  15566638 aggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattg 15566543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 34492712 - 34492618
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  34492712 gttcgattccctctgctgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 34492618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 7470411 - 7470322
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||| || ||||||||||||||||||||||||||||| || || |||| ||||  |  ||||||||| || || ||||||||||||    
T  7470411 ttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgg 7470322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 18177026 - 18176930
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||| | ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  18177026 aggttcgattccctctggtgccaatttcggtggactaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 18176930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 21363001 - 21363097
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| || |||||||  | ||| ||| ||||||||||||| ||||||||||||||||||| || |||||||| ||||||||||||    
T  21363001 aggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattg 21363097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 24165813 - 24165757
Alignment:
Q  501 ccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattgt 558  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||    
T  24165813 ccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattgt 24165757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 25289853 - 25289757
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  25289853 aggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 25289757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 40133588 - 40133492
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| || |||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  40133588 aggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 40133492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 45529893 - 45529797
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| |||  ||||||||| |||||| ||| ||||||||||||| ||||||||||||||| ||  || |||||||| ||||||||||||    
T  45529893 aggttcgattccctctggagccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattg 45529797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 7470354 - 7470259
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| || |||||||||||  ||||| |||  |||||||||||| ||||||||||||||||| |||  ||||||| || |||||||||    
T  7470354 aggttcgattccctctaatgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggccctgcaagtgggcagtgggattg 7470259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 18177083 - 18177043
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18177083 ttggggttggcctagtggttgacttgagatcttggagtttg 18177043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 26108350 - 26108445
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt 556  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| || ||||||||    
T  26108350 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 454
Target Start/End: Original strand, 21362944 - 21363031
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggt 454  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || | || ||||  |  ||||||||| | ||||||||||||||    
T  21362944 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggt 21363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 30807292 - 30807195
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag--cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| |  || |||||||| ||||| ||||||    
T  30807292 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcggtaggattg 30807195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 50583050 - 50583145
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||| || ||| ||||||||||  |||| ||| ||||||| | ||||| | || ||||||| |||||| || ||||||||||||||||||    
T  50583050 aggttcgatttcctctgttgccaatttcgttgggtaagtccatacaaaactttgatttgactttaaatggagccccgtaagtgagcggtgggattg 50583145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 8097418 - 8097284
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||  ||| |||||| |||||| ||| ||||||||||| | ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  8097418 aggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 8097320  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  8097319 cccctcggattagtcgattcttggatcggataccga 8097284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 456
Target Start/End: Complemental strand, 15566692 - 15566606
Alignment:
Q  370 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||| ||||||||| ||||||||||||||||||| || || | || ||||  |  ||||||||| ||||| ||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgg 15566606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 457
Target Start/End: Original strand, 30257625 - 30257715
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgga 457  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||||| ||| |||||||| ||||    
T  30257625 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatgga 30257715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 557
Target Start/End: Complemental strand, 45272552 - 45272459
Alignment:
Q  465 ttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    |||||||||| ||| ||||||||||  ||||| ||| |||||| |||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  45272552 ttcgattccctctggtgccaatttcggtgggctaagtccatacggagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 45272459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 49258401 - 49258267
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || | |||||| ||||||||||| ||    
T  49258401 aggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggcggtgggattggt 49258303  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  49258302 cccctcggattagtcgattcttggatcggataccga 49258267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 590
Target Start/End: Original strand, 54475779 - 54475873
Alignment:
Q  501 ccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccga 590  Q
    ||||||||||||| ||| ||||||||||||| ||| | ||||||| |||||||||||| |||||||||||    ||||||||| ||||||||||||    
T  54475779 ccatacagagctt-gctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccga 54475873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 7485721 - 7485632
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || |||| ||||  |  ||||||||| |  || ||||||||||||    
T  7485721 ttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgg 7485632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 40133645 - 40133556
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| ||| |||||||||| || || |||| ||||  |  ||||||||| | ||||||||||||||||    
T  40133645 ttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgg 40133556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 48977389 - 48977478
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || |||| ||||  |  ||||||| | | ||| ||||||||||||    
T  48977389 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgg 48977478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 48977446 - 48977542
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||||||  ||| ||||||||||  ||||  ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||||    
T  48977446 aggttcgattccttctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcggtgggattg 48977542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 53234049 - 53233953
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||| ||||||| ||| | ||||||| ||||||||||||    
T  53234049 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctctaaacggggcccccgcaagtgggcggtgggattg 53233953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 53424372 - 53424283
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||||| ||| ||||||||||||    
T  53424372 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgg 53424283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 4462634 - 4462674
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  4462634 ttggggttggcctagtggttggcttgagatcttggagtttg 4462674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 450
Target Start/End: Complemental strand, 25344253 - 25344170
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaattt 450  Q
    ||||||||||| |||||||||||||| |||||| ||||||| || || | |||||||  |   |||||||||| ||||||||||    
T  25344253 ttggggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaattt 25344170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 10190881 - 10190747
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||| ||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || ||||||||  |||||||||| ||    
T  10190881 aggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgggattggt 10190783  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  10190782 cccctcggattagtcgattcttggatcggataccga 10190747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 30257682 - 30257816
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    |||||||||||||  || |||||||||| |||| | ||| ||||||||||| |||||||||||||||| || | || |||||||| ||||||| ||| ||    
T  30257682 aggttcgattccctttggtgccaatttcgatggactaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtgggcggtggcattggt 30257780  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  30257781 cccctcggattagtcgattcttggatcggataccga 30257816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 456
Target Start/End: Original strand, 32151428 - 32151514
Alignment:
Q  370 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||| |||||||||||||| |||||||||||||| || || |||| | || |   |||||| || ||||| ||||||||||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgg 32151514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 2511436 - 2511340
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcct-cgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| |||  |||||||||| | |||||| ||||||||||  ||| |||||||| ||||||||||||    
T  2511436 aggttcgattccctctggtgccaatttcggtgggctaagttcatacagagc-tcgctctgactttaaacgggacctccgcaagtgggcggtgggattg 2511340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 4252592 - 4252555
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagt 404  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  4252592 ttggggttggcctagtggttggcttgagatcttggagt 4252555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 25289910 - 25289821
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||  ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| ||||| ||||||||||||    
T  25289910 ttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgg 25289821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 30807349 - 30807260
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  30807349 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 30807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 35492912 - 35493001
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  35492912 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 35493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 49167070 - 49167147
Alignment:
Q  380 agtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgga 457  Q
    |||||||| ||||||||||||||||||| || || |||||| ||  |  |||||| || | |||||||||||||||||    
T  49167070 agtggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtgga 49167147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 25379762 - 25379802
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  25379762 ttggggttggcctagtggttggcttgggatcttggagtttg 25379802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 34492771 - 34492731
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  34492771 ttggggttggcctagtggttggcttgggatcttggagtttg 34492731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 45529950 - 45529910
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  45529950 ttggggttggcctagtggttggcttgggatcttggagtttg 45529910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 46576349 - 46576389
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  46576349 ttggggttggcctagtggttggcttgggatcttggagtttg 46576389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 52821831 - 52821791
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  52821831 ttggtgttggcctagtggttgacttgggatcttggagtttg 52821791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 8192490 - 8192395
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||| ||  |||||||| ||||| ||||||||||||||||||  |||||  ||||||||||| ||||||||||||    
T  8192490 aggttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacggcccctcgcaagtgggcggtgggattg 8192395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 33827712 - 33827578
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||| ||  ||||||| ||||||||||| ||    
T  33827712 aggttcgattccctctggtgccaatttcgttgggctaagtccatacagagc-ttgctctggctttaaacgggacccctgcaagtgggcggtgggattggt 33827614  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    |||||||||    |||||||||| ||| ||||||||    
T  33827613 ccccttggattagtcgattcttggatcggataccga 33827578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 529
Target Start/End: Complemental strand, 3405291 - 3405224
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaac 529  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||| |||||| |||| |||||||||    
T  3405291 aggttcgattccctctggtgccaattttaatgggcaagtccatacaaagctttactctagctttaaac 3405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 19174821 - 19174916
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||  ||| ||||||||||  |||| | | ||||||||||||||||||||||||  ||||||||| || || || ||||||||||||    
T  19174821 aggttcgattccttctggtgccaatttcggtgggtaggtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgggattg 19174916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 549
Target Start/End: Original strand, 45271444 - 45271530
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcgg 549  Q
    ||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||| |||| | ||||||||||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacgaagcccctgcaagtgagcgg 45271530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 35171858 - 35171992
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| |||   ||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  35171858 aggttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 35171956  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||||||| ||||||||    
T  35171957 cccctcggattagtcgattcttgaatcggataccga 35171992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 15037960 - 15038049
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| |||||||||||| | |||||||||||||| || || |||| ||||  |  ||||||||||| ||| ||||||||||||    
T  15037960 ttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgg 15038049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 15038017 - 15038113
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    |||||||||||||  || ||||||||||  ||||| ||| ||||||||||||| ||| ||||||||||||||| || |||||||| ||||||||||||    
T  15038017 aggttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaagtgggcggtgggattg 15038113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 10582129 - 10582035
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||| |||||||||||  ||||||||||| || |||||||||    
T  10582129 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctagctttaaacgggccctcgcaagtgggc-gtgggattg 10582035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 24196062 - 24196156
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||| ||||||  ||||| ||| ||||||||| ||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  24196062 aggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgg-gccccgcaagtgggcggtgggattg 24196156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 17324824 - 17324918
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt 556  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||||||||||| ||  || | |||||| |||||||||||    
T  17324824 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgggcccccacaagtgggcggtgggatt 17324918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 44976293 - 44976196
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag--cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| |||||||||   ||||| ||| |||||||||| |||||||||||||||||||| |  || |||||||| ||||||||||||    
T  44976293 aggttcgattccctctggtgccaattttggtgggctaagtccatacagag-tttgctctggctttaaacggggctccccgcaagtgggcggtgggattg 44976196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 4618824 - 4618758
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    |||||||||| |||||| ||||||||||   ||||||| ||||||| | ||||||||||||||||||    
T  4618824 aggttcgatttcccctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctttaaa 4618758  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 5394075 - 5394171
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc-tcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| || ||||||| |||||| ||| |||||||||| ||||||||| ||||||| || |||  |||||||| ||||||||||||    
T  5394075 aggttcgattccctctggtgtcaatttcgatgggctaagtccatacagag-tttgctctgactttaaatggggccgccgcaagtgggcggtgggattg 5394171  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 18708535 - 18708604
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 531  Q
    |||||||| |||| ||||| ||||||||| |||||| |  ||||||||||||||||||| ||| ||||||    
T  18708535 aggttcgactccctctgataccaatttcagtgggcatgttcatacagagctttgctctgacttaaaacgg 18708604  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 590
Target Start/End: Complemental strand, 11941309 - 11941215
Alignment:
Q  501 ccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gtccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||| ||||||| |||    |||||||||| ||| ||||||||    
T  11941309 ccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 11941215  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 44946192 - 44946058
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 558  Q
    |||||||||||||  || ||||||||||  ||||| ||| ||||||||| ||| ||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  44946192 aggttcgattccctttggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggt 44946094  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  44946093 cccctcggattagtcgattcttggatcggataccga 44946058  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 568
Target Start/End: Original strand, 3943838 - 3943906
Alignment:
Q  501 ccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt-gtccccttggat 568  Q
    ||||||||||||| ||||||||||||||||| || | |||||||| | ||||||||| ||||||||||||    
T  3943838 ccatacagagctt-gctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggat 3943906  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 18976630 - 18976581
Alignment:
Q  358 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  18976630 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttg 18976581  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 28194276 - 28194223
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagc 511  Q
    ||||||||||||||| | ||| ||||||||||  |||||||| |||||||||||    
T  28194276 tcttaggttcgattctctctggtgccaatttcggtgggcaagtccatacagagc 28194223  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 30466969 - 30466873
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaa-cggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||| |||  || |||||||| || |||||||||    
T  30466969 aggttcgattctctctgctgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaccgggcccccgcaagtgggcagtgggattg 30466873  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 36242451 - 36242355
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| || |||||||  ||||| ||| |||  |||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  36242451 aggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattg 36242355  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 41313993 - 41314082
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||| |||||||||||  ||| |||||||||||||| || || | || ||||  |  ||||||||| | ||||||||||||||||    
T  41313993 ttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgg 41314082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 44946249 - 44946160
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||  ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||||| ||| ||||||||||||    
T  44946249 ttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgg 44946160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 14946780 - 14946820
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||| |||||| |||||||||||||||||||||| ||||||    
T  14946780 ttggagttggcctagtggttgacttgagatcttgaagtttg 14946820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 654843 - 654748
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||| ||||||||||||    
T  654843 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattg 654748  T

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Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 456 - 557
Target Start/End: Original strand, 21835207 - 21835309
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtggg 553  Q
    ||||| ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||    
T  21835207 gatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtggg 21835305  T
Q  554 attg 557  Q
    ||||    
T  21835306 attg 21835309  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 22119950 - 22120084
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  22119950 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 22120048  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  22120049 cccctcggattagtcgattcttggatcggataccga 22120084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 40543049 - 40542915
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  40543049 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 40542951  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  40542950 cccctcggattagtcgattcttggatcggataccga 40542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 7176001 - 7175905
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||| || |||||||| ||||||||||||    
T  7176001 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacaggacccccgcaagtgggcggtgggattg 7175905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 2751333 - 2751467
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || ||||| || ||||||||||| ||    
T  2751333 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggt 2751431  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  2751432 cccctcggattagtcgattcttggatcggataccga 2751467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 7275339 - 7275473
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  7275339 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattggt 7275437  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  7275438 cccctcggattagtcgattcttggatcggataccga 7275473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 23330878 - 23330809
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 531  Q
    |||||||| |||| | | ||||||||||  |||||||| |||||||||||||||||||||||| ||||||    
T  23330878 aggttcgactccctccggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgg 23330809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 29861732 - 29861828
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||| | ||||||||||||||||||| | || |||||||| ||||||||||||    
T  29861732 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 29861828  T

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Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 28647031 - 28647127
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  |||||||| | |||||||| |||||||||||||  ||||| | || | |||||| ||||||||||||    
T  28647031 aggttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattg 28647127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 410
Target Start/End: Original strand, 1469117 - 1469160
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttc 410  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  1469117 ttggggttggcctagtggttgacttgaaatcttggagtttgttc 1469160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 8435840 - 8435769
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaa 527  Q
    |||||||||||||||| || ||| ||||||||||  |||||||| ||||||| ||||||| | |||||||||    
T  8435840 gatcttaggttcgatttcctctggtgccaatttcggtgggcaagtccatacaaagctttgttttggctttaa 8435769  T

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Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 17197087 - 17196993
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| ||| ||||||||||  || || ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  17197087 gttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 17196993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 21217972 - 21217903
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||||||||||||||  ||||| ||| ||||||||||| ||||||| |||||||||||    
T  21217972 aggttcgattccctctgatgccaatttcggtgggctaagtccatacagagc-ttgctctagctttaaacgg 21217903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 2103117 - 2103213
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||||||| |||  |||||||||  ||||| ||| ||||||||||||| |||||||||||||| || ||| | ||||||| ||||||||||||    
T  2103117 aggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgggattg 2103213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 2751276 - 2751365
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  2751276 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 2751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 10091250 - 10091346
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| |||  |||||||||  ||||| ||| ||||||||||||| |||||||||||||| || | || |||||||| ||||||||||||    
T  10091250 aggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggtccccgcaagtgggcggtgggattg 10091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 22703548 - 22703644
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| || |||||||  ||||| ||| ||||||| ||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  22703548 aggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattg 22703644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 28089821 - 28089861
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  28089821 ttggggttggcctagtggttggcttgagatcttggagtttg 28089861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 9718124 - 9718030
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| ||| || ||||||| |||||| ||| ||||| ||||||| ||||||||||||||||| | |||| ||| |||||||||| ||||    
T  9718124 gttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt-gctctggctttaaacggggccctcacaaatgagcggtggaattg 9718030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 1469174 - 1469240
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    |||||||||| ||  | ||||||||||| ||||||||| ||||||| |||||| || ||||||||||    
T  1469174 aggttcgatttcctttaatgccaatttcgatgggcaagtccatacaaagctttactttggctttaaa 1469240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 18044169 - 18044238
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||    
T  18044169 aggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgg 18044238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 409
Target Start/End: Complemental strand, 38864642 - 38864600
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgtt 409  Q
    ||||||||| | ||||||||||||||||||||| |||||||||    
T  38864642 ttggggttgacctagtggttgacttgagatctttgagtttgtt 38864600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 40543115 - 40543017
Alignment:
Q  358 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||| | ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  40543115 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 40543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 7176058 - 7175969
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  7176058 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 7175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 7275282 - 7275371
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  7275282 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 7275371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 9683835 - 9683920
Alignment:
Q  371 ggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||| |||||||||||||||||||| |||||||| || || | || ||||  ||   ||||||| ||||| ||||||||||||    
T  9683835 ggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgg 9683920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 11997911 - 11998007
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  | ||| ||| ||||||| ||| ||||||||||||||||| ||  || |||||||| ||||||||||||    
T  11997911 aggttcgattccctctggtgccaatttcggttggctaagtccatacatagc-ttgctctggctttaaactgggcccccgcaagtgggcggtgggattg 11998007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 22119893 - 22119982
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  22119893 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 22119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 22638401 - 22638446
Alignment:
Q  513 ttgctctggctttaaacggagcct-cgcaagtgagcggtgggattg 557  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  22638401 ttgctctggctttaaacggggcctccgcaagtgggcggtgggattg 22638446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 568
Target Start/End: Complemental strand, 22643485 - 22643373
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggat 555  Q
    ||||| |||||||| || |||||| |||||||  | ||| ||| ||||||||||||| |||||| |||||||||||| |||||||||||  ||||| |||    
T  22643485 tcttatgttcgatttcctctgatgtcaatttcggtaggctaagtccatacagagctt-gctctgactttaaacggagccctcgcaagtggccggtgtgat 22643387  T
Q  556 t-gtccccttggat 568  Q
    | ||||||| ||||    
T  22643386 tagtcccctcggat 22643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 27312214 - 27312310
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||  |||||||||| ||| || ||| ||||||||||||   ||||| |||||||||||||| | ||||||| ||||||||||||    
T  27312214 aggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctac-ctctgactttaaacggagcccccgcaagtgggcggtgggattg 27312310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 32849596 - 32849685
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    |||||||| || |||||||||||||| |||||||||||||| || || | || ||||| |   |||||||| |||| ||||||| |||||    
T  32849596 ttggggttagcctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgg 32849685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 41907652 - 41907584
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacg 530  Q
    ||||||||||| | ||| ||||||||||| ||||| ||| ||||||||||  ||||||||||||||||||    
T  41907652 aggttcgattctctctggtgccaatttcagtgggctaagtccatacagag-gttgctctggctttaaacg 41907584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 2103060 - 2103100
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  2103060 ttggggttggcctagtggttggcttgggatcttggagtttg 2103100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 2344304 - 2344344
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  2344304 ttggggttggcctagtggttggcttgggatcttggagtttg 2344344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 7262285 - 7262345
Alignment:
Q  468 gattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||| || ||||||||||||| |||| |||  ||||| |||||||| |||||||||||||    
T  7262285 gattctccatgatgccaatttcgatggacaaatccatatagagctttactctggctttaaa 7262345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 8435891 - 8435851
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||  |||||||||||||| ||||||||||||||    
T  8435891 ttggggttggtctagtggttgacttgggatcttggagtttg 8435851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 13332619 - 13332579
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  13332619 ttggggttggcctagtggttggcttgggatcttggagtttg 13332579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 17212058 - 17212098
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  17212058 ttggggttggcttagtggttggcttgggatcttggagtttg 17212098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 18044112 - 18044152
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  18044112 ttggggttggcctagtggttggcttgggatcttggagtttg 18044152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 21218029 - 21217989
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  21218029 ttggggttggcctagtggttggcttgggatcttggagtttg 21217989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 22638297 - 22638337
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||  ||||||||||||||||||||| |||||||    
T  22638297 ttggggttggtctagtggttgacttgagatcttagagtttg 22638337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 23854401 - 23854441
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  23854401 ttggggttggcctagtggttggcttgggatcttggagtttg 23854441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 25333424 - 25333464
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  25333424 ttggggttggcttagtggttggcttgggatcttggagtttg 25333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 27312157 - 27312197
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  27312157 ttggggttggcctagtggttggcttgggatcttggagtttg 27312197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 42814869 - 42814909
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  42814869 ttggagttggcttagtggttgacttgggatcttggagtttg 42814909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 568
Target Start/End: Original strand, 32729603 - 32729710
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-tc 559  Q
    |||||||||||||  || ||||||||||  |||||||| ||||||||||| |||||||||||||||| || | || |||||||| |||||||||||| ||    
T  32729603 aggttcgattccctatggtgccaatttcggtgggcaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatc 32729701  T
Q  560 cccttggat 568  Q
    |||||||||    
T  32729702 cccttggat 32729710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 4621376 - 4621242
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  4621376 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggtccccgcaagtgggcggtgggattggt 4621278  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  4621277 cccctcggattagtcgattcttggatcggataccga 4621242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 24122081 - 24122215
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| || | |||||||| ||||||||||| ||    
T  24122081 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtgggattggt 24122179  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  24122180 cccctcggattagtcgattcttggatcggataccga 24122215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 24674451 - 24674547
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  24674451 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 24674547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 46607811 - 46607900
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  46607811 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 46607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 520
Target Start/End: Original strand, 1486476 - 1486534
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctg 520  Q
    |||||||||||||  || |||||||||| ||||| ||| ||||||||||||||||||||    
T  1486476 aggttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctg 1486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 586
Target Start/End: Complemental strand, 7766866 - 7766736
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||| ||||||  ||||| ||| ||||||||||||| |||||| |||||||||| ||| | ||||||| ||||||||||| ||    
T  7766866 aggttcgattccctctggtgctaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaagtgggcggtgggattggt 7766768  T
Q  559 ccccttgga----tcgattcttgaatcagata 586  Q
    ||||| |||    |||||||||||||| ||||    
T  7766767 cccctcggattagtcgattcttgaatcggata 7766736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 9500494 - 9500421
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc 535  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  9500494 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggagcc 9500421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 8077705 - 8077801
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||| ||  || |||||||| ||||||||||||    
T  8077705 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattg 8077801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 15059541 - 15059445
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| |||||| |||||    
T  15059541 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgagattg 15059445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 7197385 - 7197318
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacg 530  Q
    ||||||||||||| ||||||||||||||  |||| ||| | ||||||| | ||||||||||||||||||    
T  7197385 aggttcgattccctctgatgccaatttcggtgggtaagtcaatacaga-ccttgctctggctttaaacg 7197318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 47091691 - 47091731
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  47091691 ttggggttggcctagtggttggcttgagatcttggagtttg 47091731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 16539666 - 16539761
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    ||||| ||||||| ||| |||||||||   |||||||| |||||||||||||||| |||||||  ||||| |||  | ||||| | ||||||||||    
T  16539666 aggtttgattccctctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtgggattg 16539761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 521
Target Start/End: Original strand, 16899561 - 16899620
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctgg 521  Q
    ||||||||||||| ||| ||||||||||  ||||| || ||||||| |||||||||||||    
T  16899561 aggttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctgg 16899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 590
Target Start/End: Complemental strand, 8254840 - 8254757
Alignment:
Q  513 ttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccga 590  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| |||||||| ||    ||||||||||||| ||||||||    
T  8254840 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccga 8254757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 19034525 - 19034467
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctg 520  Q
    ||||||||||  | ||| ||||||||||  |||||||| ||||||||||||||||||||    
T  19034525 aggttcgattatctctggtgccaatttcggtgggcaagtccatacagagctttgctctg 19034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 23734174 - 23734243
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||||||||||||||  ||||| ||| |||||||||| |||||| || ||||||||||    
T  23734174 aggttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacgg 23734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 23741366 - 23741435
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||||||||||||||  ||||| ||| |||||||||| |||||| || ||||||||||    
T  23741366 aggttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacgg 23741435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 25237128 - 25237070
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctg 520  Q
    ||||||||||||| ||  ||||||||||  |||||||| |||||||||| |||||||||    
T  25237128 aggttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctg 25237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 27455005 - 27454936
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||| | ||||||||||||||  || || ||| ||||||||||| |||||||||||||||||||    
T  27455005 aggttcgattcactctgatgccaatttcggtgagctaagtccatacagagc-ttgctctggctttaaacgg 27454936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 1378903 - 1378988
Alignment:
Q  371 ggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||| |||||||||||||| |||||||||||||| || || |||  ||||  |  ||||| ||| | ||||||||||||||||    
T  1378903 ggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgg 1378988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 4621433 - 4621344
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  4621433 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 4621344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 17935827 - 17935923
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||  ||  ||||||||||  ||||| ||| |||||||||| |||||||||||||||||||| | || |||||||| ||| ||||||||    
T  17935827 aggttcgattccttctagtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacggggcccccgcaagtgggcgatgggattg 17935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 24674394 - 24674483
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  24674394 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 24674483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 30677234 - 30677330
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg 557  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||| |||||||||| || | || |||||||| ||||||||||||    
T  30677234 aggtttgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaatgggacccccgcaagtgggcggtgggattg 30677330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 46607868 - 46607964
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||| ||||||| ||   || |||||||| ||||||||||||    
T  46607868 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaaaggcccccccgcaagtgggcggtgggattg 46607964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 2272345 - 2272385
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  2272345 ttggggttggcctagtggttgacttgggatcttagagtttg 2272385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 7197442 - 7197402
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  7197442 ttggggttggcctagtggttggcttgggatcttggagtttg 7197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 8077648 - 8077688
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  8077648 ttggggttggcctagtggttggcttgggatcttggagtttg 8077688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 10059068 - 10059096
Alignment:
Q  379 tagtggttgacttgagatcttggagtttg 407  Q
    |||||||||||||||||||||||||||||    
T  10059068 tagtggttgacttgagatcttggagtttg 10059096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 18533920 - 18533880
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||| | ||||||||||||||||||||| |||||||    
T  18533920 ttggggttgacatagtggttgacttgagatcttagagtttg 18533880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 20487386 - 20487294
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtggatc 459  Q
    ||||||||||  ||||||||| || | |||||||||||||| || || | || |||| ||  ||||||||| | ||| |||||||||||||||    
T  20487386 ttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtggatc 20487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 520
Target Start/End: Complemental strand, 20907382 - 20907342
Alignment:
Q  480 tgccaatttcaatgggcaaggccatacagagctttgctctg 520  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  20907382 tgccaatttcagtgggtaagtccatacagagctttgctctg 20907342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 34778343 - 34778383
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  34778343 ttggggttggcctagtggttggcttgggatcttggagtttg 34778383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 37349524 - 37349564
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||  ||||||||||||||||||||| |||||||    
T  37349524 ttggggttggtttagtggttgacttgagatcttagagtttg 37349564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 52135131 - 52135171
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||  |||||||||||||| ||||||||||||||    
T  52135131 ttggggttggtctagtggttgacttgggatcttggagtttg 52135171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 40383 - 40479
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  40383 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 40479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 7454 - 7352
Alignment:
Q  456 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtggg 553  Q
    ||||| ||||||||||||| | | ||||||||||  ||||| ||| |||||||||||||| |||||||||||||||| | || |||||||| ||||||||    
T  7454 gatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttt-ctctggctttaaacggggcccccgcaagtgggcggtggg 7356  T
Q  554 attg 557  Q
    ||||    
T  7355 attg 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 29285 - 29202
Alignment:
Q  458 tcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaa 541  Q
    ||||||||||||||||| ||||||||| ||||  | || ||| |||||||||||||||||||||||| ||| ||| || |||||    
T  29285 tcttaggttcgattcccgctgatgccattttcggtcggtaagtccatacagagctttgctctggcttaaaatggacccccgcaa 29202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 5221 - 5087
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || ||||| || ||||||||||| ||    
T  5221 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggt 5123  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||| ||||||||    
T  5122 cccctcggattagtcgattcttggatcggataccga 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 5278 - 5189
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  5278 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 590
Target Start/End: Original strand, 161867 - 162001
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 558  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||| || || | || |||||||| ||||||||||| ||    
T  161867 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggcttttaatggggcccccgcaagtgggcggtgggattggt 161965  T
Q  559 ccccttgga----tcgattcttgaatcagataccga 590  Q
    ||||| |||    |||||||||| ||||||||||||    
T  161966 cccctcggattagtcgattcttggatcagataccga 162001  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 97505 - 97409
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||| |||||||| ||| || |||||||| ||||||||||||    
T  97505 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgggacccccgcaagtgggcggtgggattg 97409  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 97562 - 97473
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 456  Q
    ||||||||||| ||||||||| |||| ||||||| |||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  97562 ttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 97473  T

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Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 20280 - 20349
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||| ||||||| ||| ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||    
T  20280 aggtttgattccctctggtgccaatttcaatgggctaagtccatacatagc-ttgctctggctttaaacgg 20349  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 590
Target Start/End: Original strand, 39152 - 39284
Alignment:
Q  464 gttcgattccccctgatgccaatttcaatgggcaagg-ccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tcc 560  Q
    ||||||||||| ||| ||||||||||  ||||| | | ||||||||| ||| | ||||||||||||||| ||| | ||||||| |||||||||||| |||    
T  39152 gttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 39250  T
Q  561 ccttggat----cgattcttgaatcagataccga 590  Q
    ||| ||||    ||||||||| ||||||||||||    
T  39251 cctcggattagtcgattcttggatcagataccga 39284  T

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Target: scaffold0068 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 41840 - 41800
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  41840 ttggggttggcctagtggttgacttgggatcttggagtttg 41800  T

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Target: scaffold0209 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 528
Target Start/End: Original strand, 30219 - 30270
Alignment:
Q  477 tgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 528  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  30219 tgatgtcaatttcaatggacaagtccatatagagctttgctctggctataaa 30270  T

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Target: scaffold0717 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 97 - 28
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| || ||| ||||||| |||||| ||| |||||||||| |||||||| |||||||||||    
T  97 aggttcgattccctcttatgtcaatttcgatgggctaagtccatacagag-tttgctctagctttaaacgg 28  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 53010 - 52941
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 531  Q
    ||||||||||||| ||| ||||||||||  ||||| ||  ||||||||||| |||||||||||||||||||    
T  53010 aggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagc-ttgctctggctttaaacgg 52941  T

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Target: scaffold1175 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 2525 - 2469
Alignment:
Q  501 ccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 557  Q
    ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  2525 ccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 2469  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 1252 - 1212
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  1252 ttggggttggcctagtggttggcttgggatcttggagtttg 1212  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 8375 - 8283
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtggatc 459  Q
    ||||||||||  ||||||||| || | |||||||||||||| || || | || |||| ||  ||||||||| | ||| |||||||||||||||    
T  8375 ttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtggatc 8283  T

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Target: scaffold0459 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 10832 - 10737
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||| || |||  |||||||||  ||||| ||| ||||||||||||| |||||||||||||| || ||| | ||||||  |||||||||||    
T  10832 aggttcgatttcctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggccccacaagtggacggtgggattg 10737  T

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Target: scaffold0459; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 10889 - 10849
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  10889 ttggggttggcctagtggttggcttgggatcttggagtttg 10849  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000008; HSPs: 3)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 9495 - 9455
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  9495 ttggggttggcctagtggttggcttgggatcttggagtttg 9455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 557
Target Start/End: Complemental strand, 12139 - 12044
Alignment:
Q  462 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 557  Q
    |||||||||| || |||  |||||||||  ||||| ||| ||||||||||||| |||||||||||||| || ||| | ||||||  |||||||||||    
T  12139 aggttcgatttcctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggccccacaagtggacggtgggattg 12044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 12196 - 12156
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  12196 ttggggttggcctagtggttggcttgggatcttggagtttg 12156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 8603 - 8563
Alignment:
Q  367 ttggggttggcgtagtggttgacttgagatcttggagtttg 407  Q
    ||||||||||| ||||||||| |||| ||||||||||||||    
T  8603 ttggggttggcctagtggttggcttgggatcttggagtttg 8563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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