View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1681_high_12 (Length: 409)

Name: NF1681_high_12
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1681_high_12
NF1681_high_12
[»] chr1 (30 HSPs)
chr1 (1-409)||(44927885-44928293)
chr1 (27-166)||(44936329-44936468)
chr1 (338-409)||(45999354-45999425)
chr1 (260-313)||(23373266-23373319)
chr1 (238-331)||(29723535-29723628)
chr1 (241-330)||(31517674-31517763)
chr1 (338-403)||(36151571-36151636)
chr1 (113-166)||(45989794-45989847)
chr1 (338-409)||(29793715-29793786)
chr1 (236-330)||(15581301-15581395)
chr1 (327-380)||(44936645-44936698)
chr1 (342-406)||(7028228-7028292)
chr1 (241-284)||(14737660-14737703)
chr1 (338-409)||(15360827-15360898)
chr1 (363-405)||(3887723-3887765)
chr1 (241-331)||(32515375-32515465)
chr1 (360-409)||(289173-289222)
chr1 (339-380)||(4200191-4200232)
chr1 (249-326)||(15579533-15579610)
chr1 (340-405)||(23544708-23544773)
chr1 (241-330)||(37593618-37593707)
chr1 (338-403)||(48830142-48830207)
chr1 (351-404)||(50319230-50319283)
chr1 (243-307)||(4118807-4118871)
chr1 (241-313)||(4549475-4549547)
chr1 (241-313)||(24279813-24279885)
chr1 (338-402)||(37842421-37842485)
chr1 (261-313)||(40485727-40485779)
chr1 (261-313)||(43338180-43338232)
chr1 (340-404)||(49888705-49888769)
[»] chr3 (22 HSPs)
chr3 (241-331)||(37273180-37273270)
chr3 (241-294)||(36189712-36189765)
chr3 (241-330)||(45541618-45541707)
chr3 (239-310)||(2620853-2620924)
chr3 (338-404)||(40122819-40122884)
chr3 (340-409)||(41028919-41028988)
chr3 (261-330)||(43115103-43115172)
chr3 (241-333)||(24603686-24603778)
chr3 (241-293)||(25459564-25459616)
chr3 (261-328)||(2923527-2923594)
chr3 (241-312)||(11253566-11253637)
chr3 (338-409)||(12923391-12923462)
chr3 (338-409)||(20192672-20192743)
chr3 (342-409)||(27792805-27792872)
chr3 (338-409)||(36139811-36139882)
chr3 (338-409)||(38462214-38462285)
chr3 (340-398)||(49586984-49587042)
chr3 (340-409)||(1395604-1395673)
chr3 (338-403)||(32703077-32703142)
chr3 (360-409)||(33307668-33307717)
chr3 (337-405)||(8007760-8007828)
chr3 (361-409)||(42039092-42039140)
[»] chr6 (19 HSPs)
chr6 (338-406)||(29274295-29274363)
chr6 (245-330)||(32976025-32976110)
chr6 (241-316)||(2455871-2455946)
chr6 (342-409)||(32386169-32386236)
chr6 (241-331)||(2460085-2460175)
chr6 (337-394)||(3785859-3785916)
chr6 (342-409)||(20671935-20672002)
chr6 (365-409)||(32917159-32917203)
chr6 (338-381)||(3785766-3785809)
chr6 (338-405)||(9093622-9093689)
chr6 (338-409)||(21959661-21959732)
chr6 (267-330)||(34939560-34939623)
chr6 (338-408)||(10452426-10452496)
chr6 (360-409)||(4248891-4248940)
chr6 (338-403)||(24836265-24836330)
chr6 (241-282)||(33080512-33080553)
chr6 (361-409)||(1669877-1669924)
chr6 (261-313)||(24973981-24974033)
chr6 (245-313)||(32917261-32917329)
[»] chr5 (16 HSPs)
chr5 (241-313)||(32172717-32172789)
chr5 (27-166)||(27404096-27404235)
chr5 (338-409)||(9202814-9202885)
chr5 (338-409)||(36539679-36539750)
chr5 (241-307)||(14599306-14599372)
chr5 (345-403)||(38831529-38831587)
chr5 (328-405)||(42569036-42569113)
chr5 (340-380)||(29116998-29117038)
chr5 (338-409)||(35135728-35135799)
chr5 (278-329)||(38766516-38766567)
chr5 (338-380)||(14295468-14295510)
chr5 (360-409)||(7096215-7096264)
chr5 (245-330)||(34117486-34117570)
chr5 (290-330)||(10272414-10272454)
chr5 (345-409)||(12595524-12595588)
chr5 (345-409)||(20982208-20982272)
[»] chr7 (14 HSPs)
chr7 (220-330)||(48157032-48157143)
chr7 (338-408)||(21453228-21453298)
chr7 (344-406)||(45593791-45593853)
chr7 (338-409)||(3610806-3610877)
chr7 (339-409)||(7244635-7244703)
chr7 (338-409)||(27548196-27548267)
chr7 (338-409)||(31002694-31002765)
chr7 (342-409)||(33894556-33894622)
chr7 (261-328)||(36537957-36538024)
chr7 (241-294)||(2825170-2825223)
chr7 (338-407)||(45813246-45813315)
chr7 (241-313)||(10079273-10079345)
chr7 (242-330)||(24967108-24967196)
chr7 (345-397)||(28440464-28440516)
[»] chr4 (13 HSPs)
chr4 (338-409)||(54325103-54325174)
chr4 (241-331)||(27123286-27123376)
chr4 (241-331)||(46019563-46019653)
chr4 (241-294)||(25487491-25487544)
chr4 (261-312)||(21157833-21157884)
chr4 (267-313)||(12816999-12817045)
chr4 (241-294)||(19429404-19429457)
chr4 (261-310)||(25717660-25717709)
chr4 (338-407)||(30338658-30338727)
chr4 (343-408)||(32724053-32724118)
chr4 (338-403)||(44119228-44119293)
chr4 (241-282)||(46797109-46797150)
chr4 (241-285)||(4663679-4663723)
[»] chr2 (22 HSPs)
chr2 (243-329)||(9878618-9878704)
chr2 (261-330)||(44606064-44606133)
chr2 (338-409)||(25609729-25609800)
chr2 (241-331)||(9996784-9996874)
chr2 (345-407)||(13630354-13630416)
chr2 (241-330)||(32821856-32821945)
chr2 (338-409)||(2416246-2416317)
chr2 (241-316)||(4661321-4661396)
chr2 (338-409)||(10143105-10143176)
chr2 (338-409)||(18962104-18962175)
chr2 (342-409)||(34339056-34339123)
chr2 (243-294)||(34927046-34927097)
chr2 (338-396)||(44438905-44438963)
chr2 (340-409)||(14209210-14209279)
chr2 (338-403)||(29430695-29430759)
chr2 (353-409)||(5045238-5045294)
chr2 (338-406)||(13866825-13866893)
chr2 (241-313)||(15780141-15780213)
chr2 (341-405)||(17952770-17952834)
chr2 (290-330)||(30538156-30538196)
chr2 (341-409)||(35459843-35459911)
chr2 (365-409)||(41039739-41039783)
[»] chr8 (11 HSPs)
chr8 (351-409)||(35298557-35298615)
chr8 (339-400)||(3537098-3537159)
chr8 (261-330)||(4560549-4560618)
chr8 (246-330)||(4511075-4511159)
chr8 (234-313)||(30191068-30191147)
chr8 (338-409)||(34770825-34770896)
chr8 (241-295)||(31884874-31884928)
chr8 (237-294)||(24326114-24326171)
chr8 (333-398)||(31862437-31862502)
chr8 (338-398)||(11000627-11000687)
chr8 (345-405)||(26215433-26215493)
[»] scaffold0590 (1 HSPs)
scaffold0590 (338-409)||(1140-1211)
[»] scaffold0275 (1 HSPs)
scaffold0275 (338-409)||(2764-2835)


Alignment Details
Target: chr1 (Bit Score: 401; Significance: 0; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Original strand, 44927885 - 44928293
Alignment:
Q  1 tgtaaagctaagtaataacattaaccaccacttatttcagaaaaagaagaaaaaggaggcagaagttgaaaaatcagaagatgtttccaatactggagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44927885 tgtaaagctaagtaataacattaaccaccacttatttcagaaaaagaagaaaaaggaggcagaagttgaaaaatcagaagatgtttccaatactggagat 44927984  T
Q  101 gaagaaaaaagtgatcaagtgattgccctcaggcctctaaacatggaagacatgagacaggcaaaggaaaaggtatatttgactttaaacactattcatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44927985 gaagaaaaaagtgatcaagtgattgccctcaggcctctaaacatggaagacatgagacaggcaaaggaaaaggtatatttgactttaaacactattcatg 44928084  T
Q  201 tcatttgctgtaacgttaggggcttgtttatattaagctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44928085 tcatttgctgtaacgttaggggcttgtttatattaagctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagaaac 44928184  T
Q  301 aacttatgacatgcccgtaagttgttttcaagacatattatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttataca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44928185 aacttatgacatgcccgtaagttgttttcaagacatattatagcttatatgaaaacagcttgactttatcttatcttttgcaactgaaatagcttataca 44928284  T
Q  401 taagcactt 409  Q
    |||||||||    
T  44928285 taagcactt 44928293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 44936329 - 44936468
Alignment:
Q  27 accacttatttcagaaaaagaagaaaaaggaggcagaagttgaaaaatcagaagatgtttccaatactggagatgaagaaaaaagtgatcaagtgattgc 126  Q
    |||| |||||| ||| |||||||||||||| | ||||||||||||  | |||||| | ||||| | ||   || ||||| |||   ||||||||||||||    
T  44936329 accatttattttagacaaagaagaaaaaggtgacagaagttgaaatcttagaagaagcttccattgctaccgaagaagataaagaagatcaagtgattgc 44936428  T
Q  127 cctcaggcctctaaacatggaagacatgagacaggcaaag 166  Q
    |||||||||| |||||||||| ||||||||| ||||||||    
T  44936429 cctcaggcctttaaacatggaggacatgagagaggcaaag 44936468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 45999354 - 45999425
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| |||| ||| |||||||||||||||||||||  |  |||||||||||||||| |||||||    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcactt 45999425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 23373266 - 23373319
Alignment:
Q  260 tataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    ||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||    
T  23373266 tataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatg 23373319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 29723628 - 29723535
Alignment:
Q  238 ctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    |||||||||||||||||||||| |||||||||||| | |  ||||| ||||||| || || ||| ||||||||||| || |||  |||||||||    
T  29723628 ctaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgttttcaa 29723535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 31517674 - 31517763
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||  | |||||| ||||||||  | |||| ||||||||    
T  31517674 atttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttca 31517763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 36151571 - 36151636
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    ||||| ||||||||||||||  |||||||||| ||||||||||  | |||||||||||||||||||    
T  36151571 ttataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 45989794 - 45989847
Alignment:
Q  113 gatcaagtgattgccctcaggcctctaaacatggaagacatgagacaggcaaag 166  Q
    |||||||||||| ||||| ||||| | |||||||||||||||||||||||||||    
T  45989794 gatcaagtgatttccctccggcctttgaacatggaagacatgagacaggcaaag 45989847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 29793786 - 29793715
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||     |||||||||| |||||||||||||    
T  29793786 ttatagcttatacgaaaacaacttaactttatgttatcttttgttgtagaaatagcttgtacataagcactt 29793715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 15581395 - 15581301
Alignment:
Q  236 agctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||| |||| ||||||| ||||   |||||||||||| ||||||||||||||| || || || ||||||||||||||| |  |||| ||||||||    
T  15581395 agcttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttca 15581301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 44936645 - 44936698
Alignment:
Q  327 ttcaagacatattatagcttatacgaaaacagcttgactttatcttatcttttg 380  Q
    ||||||| | ||||||||||||| ||||| || |||||||||||||||||||||    
T  44936645 ttcaagatagattatagcttatatgaaaatagtttgactttatcttatcttttg 44936698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 7028292 - 7028228
Alignment:
Q  342 agcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagca 406  Q
    ||||||||| |||||| ||| ||||||| ||||||||||| |  ||||||| |||||||||||||    
T  7028292 agcttatacaaaaacaacttaactttattttatcttttgctatagaaatagtttatacataagca 7028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 14737660 - 14737703
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttgg 284  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  14737660 atttgagcttatttactagaataagcacttgtgagactgtttgg 14737703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 15360898 - 15360827
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| |||||||| |||||||||| ||||||||||  |  |||||| || |||||||| |||||    
T  15360898 ttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 3887723 - 3887765
Alignment:
Q  363 actttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    ||||||| ||||||||||| | |||||||||||||||||||||    
T  3887723 actttattttatcttttgctattgaaatagcttatacataagc 3887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 32515375 - 32515465
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    ||||||| |||| |||||  |||||||||||| ||| ||||||| ||| ||||| || ||| | ||||||||| |  ||||||||||||||    
T  32515375 atttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaa 32515465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 289222 - 289173
Alignment:
Q  360 ttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| ||||||||||| ||  ||||||||||||| |||||||||    
T  289222 ttgactttattttatcttttgctacaaaaatagcttatacttaagcactt 289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 4200232 - 4200191
Alignment:
Q  339 tatagcttatacgaaaacagcttgactttatcttatcttttg 380  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  4200232 tatagcttatatgaaaacaacttgactttattttatcttttg 4200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 15579610 - 15579533
Alignment:
Q  249 ttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgtt 326  Q
    |||| |||||| ||||| ||||| |||| ||||||| ||| ||| | || ||||||||||||||| || |||||||||    
T  15579610 ttatctactagcataagaacttgcaagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgtt 15579533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 405
Target Start/End: Original strand, 23544708 - 23544773
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    |||||||||| |||||||  ||||||| || ||||||||| | |  ||||||||||||||||||||    
T  23544708 atagcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagc 23544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 37593618 - 37593707
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||||||| |||| | |||| ||||||| ||| ||||||| | |||| ||  |||||||||||||||||  | |||| ||||||||    
T  37593618 atttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttca 37593707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 48830142 - 48830207
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    |||||||||||| ||||| || |||||||||| |||||||| | ||  |||||| |||||||||||    
T  48830142 ttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataa 48830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 50319283 - 50319230
Alignment:
Q  351 gaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataag 404  Q
    ||||||| ||||||||||| ||||||||||  |  |||||||||||||||||||    
T  50319283 gaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 4118807 - 4118871
Alignment:
Q  243 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttat 307  Q
    |||||||||| ||||||||||| ||||| | ||| | |||| |||| |||||||| |||||||||    
T  4118807 ttgagcttatctactagtataaacacttttgagactctttgaaagagcttatagaaacaacttat 4118871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 4549475 - 4549547
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    ||||||| |||| |||| | ||||||| || | ||| ||||||| ||| |||||||| |||||||||||||||    
T  4549475 atttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatg 4549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 24279885 - 24279813
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||| |||||||||||| |||| ||||||| ||| || ||||  |||| ||| || |||||||||||||||    
T  24279885 atttgaacttatttactagcataaacacttgtgagactgattgggggaacctatggaaacaacttatgacatg 24279813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 402
Target Start/End: Original strand, 37842421 - 37842485
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacata 402  Q
    ||||||||||| |||| |||| || ||||||| | ||||||||| |  |||||||||||||||||    
T  37842421 ttatagcttattcgaacacagtttaactttatttcatcttttgctatagaaatagcttatacata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 40485727 - 40485779
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||||||||| ||| ||||||| ||||||||| || ||| |||||||||||    
T  40485727 ataagcacttgtgagactgtttgggagaacttattgaaacatcttatgacatg 40485779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 43338232 - 43338180
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    ||||||| |||||||||| ||| ||||||||||| || ||| |||||||||||    
T  43338232 ataagcatttgtaagattatttagaagaacttatggaaacagcttatgacatg 43338180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 49888769 - 49888705
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataag 404  Q
    ||||||||||||||||||  |  ||||||| ||||||||| | |  |||||||||||||||||||    
T  49888769 atagcttatacgaaaacaattaaactttattttatctttttccaaagaaatagcttatacataag 49888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 37273270 - 37273180
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    |||||| |||||||| ||| ||||||||| || ||| ||||||| ||| ||||| || ||||||||||||||| || ||||||||||||||    
T  37273270 atttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaa 37273180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 36189765 - 36189712
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 294  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  36189765 atttgagcttatttactagtataagcacttgtgagactgtttggaggaacttat 36189712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 45541707 - 45541618
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    ||||||||||||||| | |||||| ||||||||||| ||||| |||||||||||  | ||| |||||||||||  | |||| ||||||||    
T  45541707 atttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctgttttca 45541618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 2620853 - 2620924
Alignment:
Q  239 taatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgac 310  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| |||| ||| ||| ||  ||||||||    
T  2620853 taatttgagcttatttactagtataagaacttttaatattgtttgggagaatttacagaaactgcttatgac 2620924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 404
Target Start/End: Original strand, 40122819 - 40122884
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataag 404  Q
    ||||||||| || |||||||| |||||||||| ||||||||||  | ||||||||||||||||||||    
T  40122819 ttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 41028919 - 41028988
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||  |||||||| |||||||||| || |||||||  |  ||||||||||||||||||||||||    
T  41028919 atagcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcactt 41028988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 43115172 - 43115103
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||| ||||||| |||||||||||||||  |||| || ||||||||||||||| || ||| |||||||||    
T  43115172 ataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttca 43115103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 24603686 - 24603778
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaaga 333  Q
    ||||||| || | |||||| |||||||| | | ||| ||||||| ||||||||| || |||  ||||||||||||| |||| |||||||||||    
T  24603686 atttgaggttttctactagcataagcacctctgagactgtttgggagaacttattgaaacagtttatgacatgcccataagctgttttcaaga 24603778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 25459564 - 25459616
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaactta 293  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||||||| ||||    
T  25459564 atttgagcttatcaactagcataagcacttgtgagattgtttggaagagctta 25459616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 2923594 - 2923527
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgtttt 328  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||||||  ||||| || |||||| ||||    
T  2923594 ataagtacttgaaagactgtttggaagaacttatagaaacaacttactacatgtccataagttatttt 2923527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 11253637 - 11253566
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacat 312  Q
    ||||||| |||| |||||| |||||||||||  ||| ||||||| |||| ||||| | ||||||||||||||    
T  11253637 atttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatgacat 11253566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 12923391 - 12923462
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| |||| ||| |||||||||| |||||||||   || | ||||||||||||| ||||||||    
T  12923391 ttatagcttataagaaagcagtttgactttattttatcttttattacagcaatagcttatacacaagcactt 12923462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 20192672 - 20192743
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||| ||||| |||||| | |||||||||| ||||||||||  |   |||||||||||||||||||||||    
T  20192672 ttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactt 20192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 27792872 - 27792805
Alignment:
Q  342 agcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||| ||||| || ||||| |||| ||||||||||    |||||||||||||||||||||||||    
T  27792872 agcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcactt 27792805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 36139882 - 36139811
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||||||||| ||| |||||||||| ||||||| |   || |||||||||||| ||||| |||||    
T  36139882 ttatagcttatacgaaatcagtttgactttattttatcttatattacagaaatagcttattcataaccactt 36139811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 38462285 - 38462214
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||| |||| |||||||| |||||||||| ||||||||||  |  ||||||||||||| |||| |||||    
T  38462285 ttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacactt 38462214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 49586984 - 49587042
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttata 398  Q
    |||||||||| |||||||| |||||||||| ||||||||||  |  |||||||||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 1395673 - 1395604
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| ||||| |  |||||||||| ||||||||||  |  ||||||||||||||||| ||||||    
T  1395673 atagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 32703142 - 32703077
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    |||||||||||| |||||||  |||| ||||| |||||||||  ||  ||||||||||||||||||    
T  32703142 ttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataa 32703077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 33307668 - 33307717
Alignment:
Q  360 ttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| | || |||||  |||||||||||||||||||||||||||    
T  33307668 ttgactttatttcatattttgttactgaaatagcttatacataagcactt 33307717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 8007760 - 8007828
Alignment:
Q  337 attatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    ||||||||||||| || ||||| |||||||||  ||||||||||  |  |||| |||||||||||||||    
T  8007760 attatagcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataagc 8007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 42039140 - 42039092
Alignment:
Q  361 tgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||| |||| |||||  || ||||||||||||||||||||||||    
T  42039140 tgactttattttattttttgttacagaaatagcttatacataagcactt 42039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 29274295 - 29274363
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagca 406  Q
    |||||||||||| |||||||  |||||||||| ||||||||||| |  |||||||||||||||||||||    
T  29274295 ttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 32976110 - 32976025
Alignment:
Q  245 gagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    ||||||||||||| | ||||| |||||| ||| ||||||||||| |||||||| ||| ||||||||||  || |||| ||||||||    
T  32976110 gagcttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgttttca 32976025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 2455946 - 2455871
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgccc 316  Q
    |||||||||||| |||  | |||||||||||  ||||||||| ||||| ||||| || ||||||||||||||||||    
T  2455946 atttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgccc 2455871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 32386169 - 32386236
Alignment:
Q  342 agcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||  ||||||| || ||||||| |||||||||  || |||||||||||||||||||||||||    
T  32386169 agcttatataaaaacagttttactttattttatcttttctaagtgaaatagcttatacataagcactt 32386236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 2460085 - 2460175
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    ||||||||||||  ||||| ||||| |||||| ||| ||||||  ||| ||||| || ||||||||||||||| |  ||||||||||||||    
T  2460085 atttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaa 2460175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 3785859 - 3785916
Alignment:
Q  337 attatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagct 394  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||| || |||||||||    
T  3785859 attatagcttgtacgaaaacagtttaactttattttatcttttgctaccgaaatagct 3785916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 20671935 - 20672002
Alignment:
Q  342 agcttatacgaaaacagcttgactttatcttatcttttgcaact-gaaatagcttatacataagcactt 409  Q
    ||||||||||||||||  |||||||||| |||||||||| | || |||||||||||||||||| |||||    
T  20671935 agcttatacgaaaacaatttgactttattttatcttttg-atctagaaatagcttatacataatcactt 20672002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 32917203 - 32917159
Alignment:
Q  365 tttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  32917203 tttattttatcttttgctattgaaatagcttatacataagcactt 32917159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 3785766 - 3785809
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgc 381  Q
    ||||||||||||||||||||| || ||||||| |||||||||||    
T  3785766 ttatagcttatacgaaaacagtttaactttattttatcttttgc 3785809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 9093622 - 9093689
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    ||||||||||||||||||||  || ||||||| ||||||||||  |  |||||||||||| |||||||    
T  9093622 ttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagc 9093689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 21959732 - 21959661
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| | |||||  |||||||||| ||||||||||  |  |||||||||||||| |||||||||    
T  21959732 ttatagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcactt 21959661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 34939623 - 34939560
Alignment:
Q  267 acttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||| ||||||||  ||| ||||| || ||||||||||||| | ||||||||||||||||    
T  34939623 acttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttca 34939560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 10452426 - 10452496
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcact 408  Q
    |||||||||||| ||||| || |||| ||||| |||| |||||  |  |||||||||||||||||||||||    
T  10452426 ttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcact 10452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 4248940 - 4248891
Alignment:
Q  360 ttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| ||||||||||  | |||||||||||||| ||||||||||    
T  4248940 ttgactttattttatcttttgttattgaaatagcttatatataagcactt 4248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 24836265 - 24836330
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    |||||| |||||||||||||  |||||||||| ||||||||||  |  |||||| |||||||||||    
T  24836265 ttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataa 24836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 33080512 - 33080553
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgttt 282  Q
    ||||||||||||||||| | |||||||||||| |||||||||    
T  33080512 atttgagcttatttactggcataagcacttgtgagattgttt 33080553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 1669877 - 1669924
Alignment:
Q  361 tgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||| |||||||  || |||||||||||||||||||||||||    
T  1669877 tgactttatct-atcttttataattgaaatagcttatacataagcactt 1669924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 24973981 - 24974033
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||||||||||||||||||||| ||| |||||||  | ||||||| |||||    
T  24973981 ataagcacttgtaagattgtttggtagagcttataggaataacttataacatg 24974033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 32917329 - 32917261
Alignment:
Q  245 gagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||||  |||||| |||| ||||||| ||| ||||||| ||| ||||| || |||||||||||||||    
T  32917329 gagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatg 32917261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 32172789 - 32172717
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||||||||| |||||| |||||||||||| |||| |||||| ||| ||||| || |||||||||||||||    
T  32172789 atttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatg 32172717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 27404096 - 27404235
Alignment:
Q  27 accacttatttcagaaaaagaagaaaaaggaggcagaagttgaaaaatcagaagatgtttccaatactggagatgaagaaaaaagtgatcaagtgattgc 126  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||   ||||||||| |||  |||||  ||| ||| | |    |||||||| |||| |    
T  27404096 accacttatttcaggaaaagaagaaagaggaggcagaatttgaaatcgcagaagatgcttctgatactatagaagaacatatcgatgatcaagggatttc 27404195  T
Q  127 cctcaggcctctaaacatggaagacatgagacaggcaaag 166  Q
    |||   |||| |||||||||||||||||||||| ||||||    
T  27404196 ccttgcgcctttaaacatggaagacatgagacatgcaaag 27404235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 9202814 - 9202885
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||| ||||||| |||||||  || ||||||| ||||||||||| || ||||||||||||| ||||||||||    
T  9202814 ttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcactt 9202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 36539750 - 36539679
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| |||||||| |||||||||| ||||||||||  |   |||||||||| ||||||||||||    
T  36539750 ttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcactt 36539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 14599306 - 14599372
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttat 307  Q
    |||||| |||||||||||| |||| ||||||||||||||||||  ||| ||||| || |||||||||    
T  14599306 atttgaacttatttactagcataaacacttgtaagattgtttgagagagcttatcgaaacaacttat 14599372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 403
Target Start/End: Original strand, 38831529 - 38831587
Alignment:
Q  345 ttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    |||||||||||||| |||||||||| |||||||||  ||| ||||||||||||| ||||    
T  38831529 ttatacgaaaacagtttgactttattttatcttttataacagaaatagcttatatataa 38831587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 42569036 - 42569113
Alignment:
Q  328 tcaagacatattatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    |||| ||| |||||||||||||||||||||  | |||||||| ||||||||||| |  |||||||||| | |||||||    
T  42569036 tcaaaacagattatagcttatacgaaaacaattagactttattttatcttttgctatagaaatagctttttcataagc 42569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 380
Target Start/End: Original strand, 29116998 - 29117038
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttg 380  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatcttttg 29117038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 35135728 - 35135799
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| ||||| || |||||||||| ||||||||||  |  |||||| ||||||||||| |||||    
T  35135728 ttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacactt 35135799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 38766516 - 38766567
Alignment:
Q  278 tgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttc 329  Q
    ||||||||||||||||| || ||||||||||||| | || ||||||||||||    
T  38766516 tgtttggaagaacttatggaaacaacttatgacacgtccataagttgttttc 38766567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 380
Target Start/End: Complemental strand, 14295510 - 14295468
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttg 380  Q
    |||||||||||| |||||||| |||||||||| ||||||||||    
T  14295510 ttatagcttatatgaaaacagtttgactttattttatcttttg 14295468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 7096215 - 7096264
Alignment:
Q  360 ttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| ||||||||||  |  ||||||||||||||||||||||||    
T  7096215 ttgactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 34117486 - 34117570
Alignment:
Q  245 gagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||| |||| | |||| ||||||| ||| ||| |||| || ||||| || |||||||||||||||||| |||| ||||||||    
T  34117486 gagcttatctactggcataaacacttgttagactgtctgga-gagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 10272414 - 10272454
Alignment:
Q  290 cttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||| ||||||||||||||| | ||||||||||||||    
T  10272414 cttatagaaacaacttatgacatgtctgtaagttgttttca 10272454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 12595524 - 12595588
Alignment:
Q  345 ttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||||   |||| ||||| ||||||||||| |  ||||||||||||||| ||||||||    
T  12595524 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 12595588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 20982208 - 20982272
Alignment:
Q  345 ttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||| |||||| | |||||||||| ||||| ||||  |  ||||||||||||||||||||||||    
T  20982208 ttatatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcactt 20982272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 48157032 - 48157143
Alignment:
Q  220 gggcttgtttatattaag-ctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgt 318  Q
    ||||||||||  |||||| || |||||||||||||||||  | |||||| |||| ||| ||||||| ||| |||||||| |||||||||| |||| || |    
T  48157032 gggcttgtttggattaagacttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccat 48157131  T
Q  319 aagttgttttca 330  Q
    ||| ||||||||    
T  48157132 aagctgttttca 48157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 21453298 - 21453228
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcact 408  Q
    |||||||||||| || |||| ||||||||||||||||||||||  || |||||||||| || |||| ||||    
T  21453298 ttatagcttatatgagaacaacttgactttatcttatcttttgttacagaaatagcttgtatataaacact 21453228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 406
Target Start/End: Original strand, 45593791 - 45593853
Alignment:
Q  344 cttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagca 406  Q
    |||||| |||||||| |||||||||| |||| |||||  || |||||||||||||||||||||    
T  45593791 cttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagca 45593853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 3610806 - 3610877
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||||| ||||||| ||| ||| || ||||||||||     ||||||||||||||||||||||||    
T  3610806 ttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagcactt 3610877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 409
Target Start/End: Complemental strand, 7244703 - 7244635
Alignment:
Q  339 tatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||  |||||||| |||||||| | ||||||||||  |  ||||||||||||||||||||||||    
T  7244703 tatagcttat--gaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcactt 7244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 27548267 - 27548196
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| | |||||||  | |||||||| ||||||||||| |  ||||||||||||| ||||||||||    
T  27548267 ttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcactt 27548196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 31002765 - 31002694
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| ||||| |  |||||||||| ||||||||||    |||||||| ||||||||||||||||    
T  31002765 ttatagcttatatgaaaatattttgactttattttatcttttgtggttgaaatagtttatacataagcactt 31002694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 33894622 - 33894556
Alignment:
Q  342 agcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||| |||||||| ||||||| || ||||||||||  |  ||||||||||||||||||||||||    
T  33894622 agcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcactt 33894556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 36538024 - 36537957
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgtttt 328  Q
    |||| ||||||| ||||||||||  ||||||||| || |||||||||||||||  | |||||||||||    
T  36538024 ataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 2825170 - 2825223
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 294  Q
    |||||||||||| ||||  ||||||||||||| ||| | |||||||||||||||    
T  2825170 atttgagcttatctacttatataagcacttgtgagactctttggaagaacttat 2825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 45813246 - 45813315
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcac 407  Q
    |||||| ||||| |||||||  |||||||||| ||||||||||  |  ||||||||||||| ||||||||    
T  45813246 ttatagattatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 10079273 - 10079345
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||||||||||||| || |||| ||||| | || |||||||| ||| |||||||| ||| || ||||||||    
T  10079273 atttgagcttatttacgagcataaacacttatgaggttgtttgggagagcttatagaaacagctgatgacatg 10079345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 24967196 - 24967108
Alignment:
Q  242 tttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    ||||||||||| ||||||||||| || || | ||| |||||||||||  |||| || ||||||||| ||||  ||  ||||||||||||    
T  24967196 tttgagcttatctactagtataaacatttatgagactgtttggaagagattatggaaacaacttataacatatccagaagttgttttca 24967108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 28440516 - 28440464
Alignment:
Q  345 ttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttat 397  Q
    ||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  28440516 ttatacgaaaaccatttgactttattttatcttttgttactgaaatagcttat 28440464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 54325103 - 54325174
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| |||||||| |||||||||| |||||||||| ||  ||||||| ||||||| ||||||||    
T  54325103 ttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcactt 54325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 27123286 - 27123376
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    ||||||||||||  ||||| ||||| |||||| ||| ||||||  ||| ||||| || ||||||||||||||| |  ||||||||||||||    
T  27123286 atttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaa 27123376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 46019563 - 46019653
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    |||||||||||| |||||||||||  |||||| ||||||| || ||||  ||||| ||| |||||||||||||    ||||||||||||||    
T  46019563 atttgagcttatgtactagtataaaaacttgtgagattgtctgaaagagtttataaacagaacttatgacatgttgataagttgttttcaa 46019653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 25487491 - 25487544
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 294  Q
    ||||||| |||| || ||| |||||||||||||||||||||||||||| |||||    
T  25487491 atttgagtttatctattagcataagcacttgtaagattgtttggaagagcttat 25487544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 21157884 - 21157833
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacat 312  Q
    |||||||||||||||| ||||||||||| |||| ||| ||| ||||||||||    
T  21157884 ataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacat 21157833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 313
Target Start/End: Complemental strand, 12817045 - 12816999
Alignment:
Q  267 acttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  12817045 acttgtgagattgtttgaaagaacttagagaaacaacttatgacatg 12816999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 19429404 - 19429457
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 294  Q
    ||||||||||||||||| |||||| ||||||| ||| ||||||| ||| |||||    
T  19429404 atttgagcttatttactggtataaacacttgtgagactgtttgggagagcttat 19429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 25717709 - 25717660
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgac 310  Q
    |||||||||||| | ||||||||||||| ||||| || ||||||||||||    
T  25717709 ataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgac 25717660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 30338658 - 30338727
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcac 407  Q
    |||||||||||| |||||||| || |||||||  |||||||||  |  ||||||| ||||||||||||||    
T  30338658 ttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 32724118 - 32724053
Alignment:
Q  343 gcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcact 408  Q
    ||||||| ||||| || |||||||||| |||||||||| ||  ||||||| ||| |||||||||||    
T  32724118 gcttatatgaaaatagtttgactttattttatcttttgtaatagaaatagattagacataagcact 32724053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 44119228 - 44119293
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    |||||||||||| |||||||  |||||||| | ||||||||||| |  |||||| |||||||||||    
T  44119228 ttatagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataa 44119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 46797150 - 46797109
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgttt 282  Q
    ||||||||||||||||| |||||||||||||| ||| |||||    
T  46797150 atttgagcttatttacttgtataagcacttgtgagactgttt 46797109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 4663679 - 4663723
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttgga 285  Q
    ||||||||||||||| |  ||||| ||||||||||||||||||||    
T  4663679 atttgagcttatttagtgatataaacacttgtaagattgtttgga 4663723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 9878618 - 9878704
Alignment:
Q  243 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttc 329  Q
    |||||||||||||||||  ||||||||| | ||| |||  |||||| ||||| || ||||||||||||||| || ||||||||||||    
T  9878618 ttgagcttatttactagcttaagcacttctgagactgtagggaagagcttatggaaacaacttatgacatgtccataagttgttttc 9878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 44606064 - 44606133
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    ||||| ||||||| || |||||||||||||||||  | ||||||||||||||| || |||||||||||||    
T  44606064 ataagtacttgtacgactgtttggaagaacttatgaaaacaacttatgacatgtccataagttgttttca 44606133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 25609800 - 25609729
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||||||||| |  |||||||||| |||||||||   |  ||||||||||||||||||||||||    
T  25609800 ttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcactt 25609729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 9996874 - 9996784
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 331  Q
    ||||||||||||  ||||| ||||| |||||| ||| || |||| ||| |||||||| |||||||||||||| ||| ||| ||||| ||||    
T  9996874 atttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacatacccataaattgttctcaa 9996784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 407
Target Start/End: Original strand, 13630354 - 13630416
Alignment:
Q  345 ttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcac 407  Q
    ||||| |||||||| |||||||||||||||||||||  |  |||||| |||||||||||||||    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataagcac 13630416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 32821945 - 32821856
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||||||| ||| |   |||||| ||| |||| |||||||||||  ||||||| ||||||||||||||| || |||| ||||||||    
T  32821945 atttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttca 32821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 2416317 - 2416246
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||||  ||||||  || |||| || ||||||||||| || |||||| |||||||||||||||||    
T  2416317 ttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactt 2416246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 4661396 - 4661321
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgccc 316  Q
    ||||||| |||| ||||  ||||| | |||||||||||||||  |||||||||| ||  |||||||||||||||||    
T  4661396 atttgagtttatctactcatataaactcttgtaagattgtttcaaagaacttatggaagcaacttatgacatgccc 4661321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 10143176 - 10143105
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||||  ||||||| ||||||| || ||||||||||  |  |||||| |||||||||||||||||    
T  10143176 ttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcactt 10143105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 18962104 - 18962175
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||| |||||||| || ||||||| ||||||||||  |   |||||||| ||||||||||||||    
T  18962104 ttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcactt 18962175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 34339123 - 34339056
Alignment:
Q  342 agcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||||||||  ||||||||| |||||||| || |  |||| || ||||||||||||||||    
T  34339123 agcttatacgaaaacagtctgactttattttatctttagctatagaaaaagtttatacataagcactt 34339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 34927097 - 34927046
Alignment:
Q  243 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 294  Q
    |||||||||||||||   |||||||||| ||||| |||||||||||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttat 34927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 44438905 - 44438963
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagctta 396  Q
    |||| |||| ||| ||||||| |||||||||| ||||||||||| || |||||||||||    
T  44438905 ttatggcttgtacaaaaacagtttgactttattttatcttttgctacggaaatagctta 44438963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 14209279 - 14209210
Alignment:
Q  340 atagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| |||||||| |||| ||||| ||||||||||  | |||||||||||| ||| || |||||    
T  14209279 atagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacactt 14209210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 29430759 - 29430695
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataa 403  Q
    |||||||||||| |||||||| |||||||||| ||| ||||||  |  ||||||||||||||||||    
T  29430759 ttatagcttataagaaaacagtttgactttat-ttaacttttgttatagaaatagcttatacataa 29430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 5045238 - 5045294
Alignment:
Q  353 aaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||||||||||||||| ||||||||||  |   ||||||||||||||||| |||||    
T  5045238 aaacagcttgactttattttatcttttgttataaaaatagcttatacataaacactt 5045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 13866893 - 13866825
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagca 406  Q
    |||||| |||||  ||||||| ||||||| || ||||||||||| |  ||||||| |||||||||||||    
T  13866893 ttatagattatataaaaacagtttgacttaattttatcttttgctatagaaatagtttatacataagca 13866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 15780213 - 15780141
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    ||||||||||||  ||||| |||| | |||||||||||||||| |||| || ||||| |||| | ||||||||    
T  15780213 atttgagcttatcgactagcataaccccttgtaagattgtttgaaagatctcatagaaacaattaatgacatg 15780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 405
Target Start/End: Original strand, 17952770 - 17952834
Alignment:
Q  341 tagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    ||||||||| ||||| || |||||||||| ||||||||||  |  ||||||||||||| ||||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagc 17952834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 30538156 - 30538196
Alignment:
Q  290 cttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||| ||||||||||||||| || |||||||||||||    
T  30538156 cttatagaaacaacttatgacatgtccataagttgttttca 30538196  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 35459911 - 35459843
Alignment:
Q  341 tagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||||||||||  |||||||||| ||||||||||  |   |||||||||||||| || |||||    
T  35459911 tagcttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcactt 35459843  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 41039739 - 41039783
Alignment:
Q  365 tttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    ||||| ||||||||||  || ||||||||||||||||||||||||    
T  41039739 tttattttatcttttgtcacagaaatagcttatacataagcactt 41039783  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 35298557 - 35298615
Alignment:
Q  351 gaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||| | ||| |||||| ||||||||||  |||||||||||||||||||||||||||    
T  35298557 gaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcactt 35298615  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 3537098 - 3537159
Alignment:
Q  339 tatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttataca 400  Q
    |||||||||||||||||||  |||||||||| ||||||||||| |  ||||| |||||||||    
T  3537098 tatagcttatacgaaaacaatttgactttattttatcttttgctatagaaattgcttataca 3537159  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 4560618 - 4560549
Alignment:
Q  261 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    |||||||||||| || |||||||||||||||||| || | ||||||| ||||| | ||||| ||||||||    
T  4560618 ataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatgtcagtaagctgttttca 4560549  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 4511159 - 4511075
Alignment:
Q  246 agcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 330  Q
    ||||||| |||| |||||||||||||| ||| | || | ||||||||||  | |||||||| |||||||||||||| | ||||||    
T  4511159 agcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatgcccgtaagctattttca 4511075  T

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Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 30191068 - 30191147
Alignment:
Q  234 taagctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 313  Q
    |||||| ||||||| |||| || | | |||||||||||| ||| ||||||| ||| ||||| || |||||||||||||||    
T  30191068 taagcttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatg 30191147  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 34770896 - 34770825
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||||||||| | |||||||  |||||||||| |||||||||| ||  ||||||| || |||||||||||||    
T  34770896 ttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacataagcactt 34770825  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 31884874 - 31884928
Alignment:
Q  241 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttata 295  Q
    |||||||||||| |||||| |||||||||||| ||| ||||||| | ||||||||    
T  31884874 atttgagcttatctactagcataagcacttgtgagagtgtttgggaaaacttata 31884928  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 24326171 - 24326114
Alignment:
Q  237 gctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 294  Q
    |||||||||||||||| |||| | |||||||||||| ||| ||||||| ||| |||||    
T  24326171 gctaatttgagcttatctactggcataagcacttgtgagactgtttgggagagcttat 24326114  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 31862502 - 31862437
Alignment:
Q  333 acatattatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttata 398  Q
    |||| ||||||||||||||| || || |||||||||| ||||||||||  | ||||||| ||||||    
T  31862502 acatcttatagcttatacgagaatagtttgactttatattatcttttgttattgaaataacttata 31862437  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 11000627 - 11000687
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttata 398  Q
    ||||||||||| ||||||||  |||||||||| ||||||||||  |  |||||||||||||    
T  11000627 ttatagcttattcgaaaacaatttgactttattttatcttttgttatggaaatagcttata 11000687  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 26215493 - 26215433
Alignment:
Q  345 ttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagc 405  Q
    ||||||||||| || || ||||||| ||||||||||  |  ||||||||||||||||||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagc 26215433  T

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Target: scaffold0590 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 1140 - 1211
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||| ||||||| || || || |||||||||| ||||||||||  |  ||||||||||||||||||||||||    
T  1140 ttatggcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcactt 1211  T

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Target: scaffold0275 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 2835 - 2764
Alignment:
Q  338 ttatagcttatacgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcactt 409  Q
    |||| ||||||| || || || |||||||||| ||||||||||  |  ||||||||||||||||||||||||    
T  2835 ttatggcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcactt 2764  T

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