View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_high_24 (Length: 350)
Name: NF1681_high_24
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1681_high_24 |
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[»] scaffold0549 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 333
Target Start/End: Original strand, 37681898 - 37682213
Alignment:
Q |
18 |
taaatctagtgcggctgagggatctattggtagctgcattggactttagaaagnnnnnnntagcatagtactcatgagttctatgtgccacattgcttag |
117 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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T |
37681898 |
taaatctagtgcggctgagggatctattggtagctgcattggactttagaaagaaaaaaatagcatagtactcatgagttctatgtgccacattgcttag |
37681997 |
T |
|
Q |
118 |
ttgaaacaacaagtaccgatgctttgtgatataaaacaagagtttattctcttcacaaatcatacatttctcggccttttggctaagatcaagtgtagta |
217 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
37681998 |
ttgaaacaacaagtaccgatgctttgtgatataaaacaagagtttattctcttcacaaatcatacatttctcggccttttggctaagatcaagtgtagta |
37682097 |
T |
|
Q |
218 |
tctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatttgnnnnnnnagggtgagagtccaccaaaatagcttgctatt |
317 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
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T |
37682098 |
tctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatttgtttttttaggatgagagtccaccaaaatagcttgctatt |
37682197 |
T |
|
Q |
318 |
aggtctctcaagtgtc |
333 |
Q |
|
|
|||||||||||||||| |
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|
T |
37682198 |
aggtctctcaagtgtc |
37682213 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 86 - 277
Target Start/End: Original strand, 37679666 - 37679855
Alignment:
Q |
86 |
tactcatgagttctatgtgccacattgcttagttgaaacaacaagtaccgatgctttgtgatataaaacaagagtttattctcttcacaaatcatacatt |
185 |
Q |
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|
|||||||||||| ||||| |||||||| |||| |||| ||||||||| || |||||| ||||||| ||||||| | | | | |||| | |||| || |
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|
T |
37679666 |
tactcatgagttttatgtcccacattggttagaagaaataacaagtactgaagctttgc--tataaaataagagttcaattacataacaatttatacctt |
37679763 |
T |
|
Q |
186 |
tctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaattt |
277 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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|
T |
37679764 |
tctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacttgatattaaattt |
37679855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 41841259 - 41841160
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
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|
T |
41841259 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggtccaatgggtcacacgatattaaatt |
41841160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 40054312 - 40054411
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |
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|
T |
40054312 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatgggtcatacgatattaaatt |
40054411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 10944506 - 10944407
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||| |
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|
T |
10944506 |
tcatacctttctcgaccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatcttatatgtggacaaatggttcacacgatattaaatt |
10944407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 44878983 - 44879082
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |
|
|
T |
44878983 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaatgggtcacatgatattaaatt |
44879082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 44880938 - 44880839
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |
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T |
44880938 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaatgggtcacatgatattaaatt |
44880839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 44582870 - 44582924
Alignment:
Q |
194 |
ttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgt |
248 |
Q |
|
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
44582870 |
ttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgt |
44582924 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 42220952 - 42220880
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgg |
250 |
Q |
|
|
|||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
T |
42220952 |
tcatacatttttcggtcttttggctaagatcaagtgtagtatct-ttcttattagtttaatatctgatatgtgg |
42220880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 42555174 - 42555091
Alignment:
Q |
193 |
cttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||||||||||||||||| || ||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||| |
|
|
T |
42555174 |
cttttggctaagatcaagtgcagaatctgtttttatcagtttaatatttgatatgtggttcaatgaatcacacgatattaaatt |
42555091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 42092021 - 42092093
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgg |
250 |
Q |
|
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|||||| ||||| |||||||| |||| || ||||||| ||| ||||||||||||||||||||||||||||||| |
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|
T |
42092021 |
tcatacctttctttgccttttg-ctaaaattaagtgtaatatttgttcttatcagtttaatatctgatatgtgg |
42092093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 42872557 - 42872514
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatct |
220 |
Q |
|
|
|||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
T |
42872557 |
tcatacctttctcggccttttggctaagattaagtgtagtatct |
42872514 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 37677755 - 37677799
Alignment:
Q |
89 |
tcatgagttctatgtgccacattgcttagttgaaacaacaagtac |
133 |
Q |
|
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||||||||||||||| |||||||| || | ||||||||||||||| |
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T |
37677755 |
tcatgagttctatgtcccacattggttggatgaaacaacaagtac |
37677799 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 14652522 - 14652624
Alignment:
Q |
174 |
aaatcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
14652522 |
aaatcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaa |
14652621 |
T |
|
Q |
274 |
att |
276 |
Q |
|
|
||| |
|
|
T |
14652622 |
att |
14652624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 14662313 - 14662415
Alignment:
Q |
174 |
aaatcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
14662313 |
aaatcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaa |
14662412 |
T |
|
Q |
274 |
att |
276 |
Q |
|
|
||| |
|
|
T |
14662413 |
att |
14662415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 14654447 - 14654348
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14654447 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14654348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 14664238 - 14664139
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14664238 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14664139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 14669816 - 14669717
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14669816 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14669717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 14683750 - 14683849
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14683750 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14683849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 14706088 - 14706187
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14706088 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14706187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 14708578 - 14708677
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14708578 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14708677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 14681601 - 14681698
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
14681601 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
14681698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 14674481 - 14674580
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |
|
|
T |
14674481 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacatgatattaaatt |
14674580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 14676632 - 14676727
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatatta |
272 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
T |
14676632 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatatta |
14676727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 14679859 - 14679958
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |
|
|
T |
14679859 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacatgatattaaatt |
14679958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 14716291 - 14716390
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| |
|
|
T |
14716291 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctaatatgtggaccaatggttcacacgatattaaatt |
14716390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 38175637 - 38175538
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
T |
38175637 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgttccaatgggtcacacgatattaaatt |
38175538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 14667218 - 14667119
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| |||| ||||||||||| |
|
|
T |
14667218 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgatacgtggaccaatggttcacatgatattaaatt |
14667119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 33988070 - 33988169
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
33988070 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaatgagtcacacgatattaaatt |
33988169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 28366306 - 28366206
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtg-ggccaatggtccacacgatattaaat |
275 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
T |
28366306 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgaccccaatgggtcacacgatattaaat |
28366207 |
T |
|
Q |
276 |
t |
276 |
Q |
|
|
| |
|
|
T |
28366206 |
t |
28366206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 11872581 - 11872489
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| |
|
|
T |
11872581 |
tttctcggccttttgactaagatcaagtgtactatctgttcttatcagtttaatatatgatatgtggttcaatgggtcacacgatattaaatt |
11872489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 37422176 - 37422247
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaa |
255 |
Q |
|
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| |
|
|
T |
37422176 |
tttctcggccttttggctaagatcaagtgtagcatatgttcttatcagtttaatatctgatatgtggtccaa |
37422247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 28698553 - 28698625
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtg |
249 |
Q |
|
|
||||||||||||||| ||||||||||||||||| |||||||| | || |||||| |||||||| ||||||||| |
|
|
T |
28698553 |
tcatacatttctcggtcttttggctaagatcaaatgtagtatatatttttatcaatttaatatttgatatgtg |
28698625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 14703133 - 14703179
Alignment:
Q |
230 |
agtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||||||| |||||||||| ||||| ||||||||||||||||||| |
|
|
T |
14703133 |
agtttaatatttgatatgtggaccaatagtccacacgatattaaatt |
14703179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 23)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 32918080 - 32918179
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
32918080 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatt |
32918179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 30732008 - 30732107
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| |
|
|
T |
30732008 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctaatatgtggaccaatggttcacacgatattaaatt |
30732107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 30733990 - 30734087
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |
|
|
T |
30733990 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacatgatattaaatt |
30734087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 2841124 - 2841025
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
T |
2841124 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggttcaatggatcacacgatattaaatt |
2841025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 43850049 - 43850147
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaat |
275 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| |
|
|
T |
43850049 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatgagtcacatgatattaaat |
43850147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 9020847 - 9020928
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |
|
|
T |
9020847 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatatctgagatgtggcccaatgg |
9020928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 9008021 - 9008102
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
T |
9008021 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgattagtggcccaatgg |
9008102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 9026786 - 9026867
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
T |
9026786 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgattagtggcccaatgg |
9026867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 9032053 - 9032126
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgg |
250 |
Q |
|
|
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
9032053 |
tcatacctttctcggccttttggttaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgg |
9032126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 10763978 - 10763886
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |
|
|
T |
10763978 |
tttctcggtcttttgactaagatcaagtgtagtatatgttcttatcagtttaatatctgatatgtggatcaatggtccatacaatattaaatt |
10763886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 8973312 - 8973393
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |
|
|
T |
8973312 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgattagtggcccaatgg |
8973393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 9023447 - 9023528
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |
|
|
T |
9023447 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgattagtggcccaatgg |
9023528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 8979322 - 8979389
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat |
244 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
8979322 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatttgat |
8979389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 19232504 - 19232408
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||| ||||| |||||||||| |
|
|
T |
19232504 |
atacctttctcggccttttggctaagatcaagtgtaatatctgttcttatcagtttaata-ctgatatgtgacccattgggtcacacaatattaaatt |
19232408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 8984693 - 8984760
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat |
244 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |
|
|
T |
8984693 |
tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttattagtttaatatttgat |
8984760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 9030405 - 9030497
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| | |||| |||||| ||||| ||||||||| |
|
|
T |
9030405 |
tttcttggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatatttgagaagtggctcaatgggtcacacagtattaaatt |
9030497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 8988463 - 8988522
Alignment:
Q |
185 |
ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat |
244 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
T |
8988463 |
ttcttggccttttggcgaagatcaagtgtagtatttgttcttatcagtttaatatttgat |
8988522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 8992155 - 8992229
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||| | |||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||| ||||||| |
|
|
T |
8992155 |
tttctcagtcttttggctaagatcaagtgtagtatatgttcttatgagttcaatatctgattagtggcccaatgg |
8992229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 35701906 - 35701967
Alignment:
Q |
194 |
ttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaa |
255 |
Q |
|
|
|||||||||||||||||||| |||| |||| |||| |||||||||| ||||||||||||||| |
|
|
T |
35701906 |
ttttggctaagatcaagtgtggtatttgtttttattagtttaatatttgatatgtgggccaa |
35701967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 6471813 - 6471747
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatat |
246 |
Q |
|
|
|||| ||| ||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |
|
|
T |
6471813 |
atacctttttcgaccttttggctaagat-aagtgtagtatatgttcttattagtttaatatctgatat |
6471747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 9016508 - 9016577
Alignment:
Q |
192 |
ccttttggctaagatcaagtgtagtatctgttcttatc---agtttaatatctgatatgtgggccaatgg |
258 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||| |
|
|
T |
9016508 |
ccttttggctaagatcaaatgtagtatctgttcttatcagtagtttaatatctgattagtggcccaatgg |
9016577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 17225743 - 17225671
Alignment:
Q |
205 |
atcaagtgtagtatctgttctt-atcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||||||||||||| || ||| |||||||| ||||||| ||| |||||| || ||||||||||||| |
|
|
T |
17225743 |
atcaagtgtagtatctgttttttatcggtttaataactgatatctggtccaatgaatcatacgatattaaatt |
17225671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 17275862 - 17275930
Alignment:
Q |
208 |
aagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||||| ||||||||||||| ||| | | |||||||| ||||||| ||||||||||| |||| |
|
|
T |
17275862 |
aagtgtagtatacgttcttatcagttcaatctttaatatgtggtccaatggatcacacgatattgaatt |
17275930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 178 - 276
Target Start/End: Complemental strand, 26984773 - 26984675
Alignment:
Q |
178 |
catacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
26984773 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatt |
26984675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 178 - 276
Target Start/End: Complemental strand, 26998846 - 26998748
Alignment:
Q |
178 |
catacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
26998846 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatt |
26998748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 11652499 - 11652400
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
T |
11652499 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatgggtcacacgatattaaatt |
11652400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 49106636 - 49106537
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
T |
49106636 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggtccaatggatcacacgatattaaatt |
49106537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 50077306 - 50077207
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |
|
|
T |
50077306 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgttccaatggttcacatgatattaaatt |
50077207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 3461249 - 3461150
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
T |
3461249 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgactcaatgggtcacacgatattaaatt |
3461150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 49108740 - 49108641
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
T |
49108740 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgactcaatgggtcacacgatattaaatt |
49108641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 48205832 - 48205930
Alignment:
Q |
178 |
catacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||| |||||||||||||| |||||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| |||| ||| ||||||||||| |
|
|
T |
48205832 |
catacctttctcggccttttagctaagattaagtgtagtatctgttcttattaatttaatatcttatatgtggaccattggtttacatgatattaaatt |
48205930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 21503706 - 21503777
Alignment:
Q |
205 |
atcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| |
|
|
T |
21503706 |
atcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaataggtcacacgatattaaatt |
21503777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 41013651 - 41013554
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||| |||||||||||||||| |||||| |||| || ||| |||||||||| |||||||||||||||||||| |||| ||| |||| | ||||||||| |
|
|
T |
41013651 |
atacttttctcggccttttggttaagattaagtataatatatgttcttatccgtttaatatctgatatgtggaccaagggttcacatggtattaaatt |
41013554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 6432010 - 6431957
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaat |
237 |
Q |
|
|
||||||||||| ||||||||||||| || |||||||| ||||||| |||||||| |
|
|
T |
6432010 |
tttctcggcctattggctaagatcaggtttagtatctcttcttattagtttaat |
6431957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 26982549 - 26982637
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaat |
275 |
Q |
|
|
||||||||||| |||||||||||||||||||| ||||| |||| |||||| ||||| |||||||| ||||| | ||| |||||||||| |
|
|
T |
26982549 |
tttctcggcctcttggctaagatcaagtgtagcatctg---ttattagtttagtatctaatatgtggatcaatgatttacatgatattaaat |
26982637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 172 - 343
Target Start/End: Original strand, 30521237 - 30521408
Alignment:
Q |
172 |
acaaatcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatatt |
271 |
Q |
|
|
||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |
|
|
T |
30521237 |
acaaatcatacctttctcgaccttttggctgagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccatcgcctcacacgatatt |
30521336 |
T |
|
Q |
272 |
aaatttgnnnnnnnagggtgagagtccaccaaaatagcttgctattaggtctctcaagtgtcgcctttgctt |
343 |
Q |
|
|
||||| |||| |||||||||| | ||||||||||||| |||||||||||||||| |||||||| |
|
|
T |
30521337 |
caatttattttttgagggggagagtccactactatagcttgctattgggtctctcaagtgtcgtctttgctt |
30521408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 10795997 - 10795898
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
T |
10795997 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgacccaatgggtcacacgatattaaatt |
10795898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 10791759 - 10791660
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |
|
|
T |
10791759 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgatccaatgggtcacatgatattaaatt |
10791660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 8875691 - 8875788
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||| |
|
|
T |
8875691 |
atacatttcccggccttttggctaagatcaagtgtaatatctgttcttatcaatttaatatctgatatgtggtccaatagattacacgatattaaatt |
8875788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 13136607 - 13136653
Alignment:
Q |
230 |
agtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
13136607 |
agtttaatatctgatatgtggaccaatggtccacacgatattaaatt |
13136653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 11333273 - 11333329
Alignment:
Q |
220 |
tgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||||||||||||||||||||||||| |||| || |||||||||||||||| |
|
|
T |
11333273 |
tgttcttatcagtttaatatctgatatgtggtccaacggatcacacgatattaaatt |
11333329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 21216031 - 21216098
Alignment:
Q |
183 |
atttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgg |
250 |
Q |
|
|
|||||| || |||||| ||||||||| || ||| |||| |||||||||||||||||||| |||||||| |
|
|
T |
21216031 |
atttcttggtcttttgactaagatcatgtatagcatctattcttatcagtttaatatcttatatgtgg |
21216098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 3643640 - 3643739
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |
|
|
T |
3643640 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccattgggtcacacgatattaaatt |
3643739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 7524968 - 7525067
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
T |
7524968 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgatccaatggatcacacgatattaaatt |
7525067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 1716559 - 1716459
Alignment:
Q |
177 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggcc-aatggtccacacgatattaaat |
275 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |
|
|
T |
1716559 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggtccaaatgggtcacacgatattaaat |
1716460 |
T |
|
Q |
276 |
t |
276 |
Q |
|
|
| |
|
|
T |
1716459 |
t |
1716459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 4103252 - 4103344
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
T |
4103252 |
tttctcagcattttggttaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatagtccacacgatattaaatt |
4103344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 5350672 - 5350788
Alignment:
Q |
210 |
gtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatttgnnnnnnnagggtgagagtccaccaaaatagc |
309 |
Q |
|
|
||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||| |
|
|
T |
5350672 |
gtgtagtatctattgttatcagtttaatatctgatatgtgggacaatggtccacacgatattaaatttatttcttgaggggtagagtccaccaaagtagc |
5350771 |
T |
|
Q |
310 |
ttgctattaggtctctc |
326 |
Q |
|
|
|||||||| | |||||| |
|
|
T |
5350772 |
ttgctattggatctctc |
5350788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 19261217 - 19261152
Alignment:
Q |
183 |
atttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgt |
248 |
Q |
|
|
||||||| |||||||| |||||||||||||| ||| |||||||||| ||| |||||||||||||| |
|
|
T |
19261217 |
atttctcagccttttgattaagatcaagtgtaatatatgttcttatccgttaaatatctgatatgt |
19261152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 13636365 - 13636411
Alignment:
Q |
230 |
agtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
||||||||||||||||||||| ||| |||||||||| ||||||||| |
|
|
T |
13636365 |
agtttaatatctgatatgtggatcaacggtccacacggtattaaatt |
13636411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 16037861 - 16037956
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
276 |
Q |
|
|
|||| |||||||||| ||| ||||||||||||||||||| ||||||||| | ||||||| ||||| |||| | ||||| || ||||||||||||| |
|
|
T |
16037861 |
atacttttctcggccgtttt-ctaagatcaagtgtagtatttgttcttattatcttaatatttgata-gtggtctaatgggtcaaacgatattaaatt |
16037956 |
T |
|
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Target: scaffold0549 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0549
Description:
Target: scaffold0549; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 341
Target Start/End: Original strand, 5447 - 5560
Alignment:
Q |
228 |
tcagtttaatatctgatatgtgggccaatggtccacacgatattaaatttgnnnnnnnagggtgagagtccaccaaaatagcttgctattaggtctctca |
327 |
Q |
|
|
||||||||||||||||||| ||||||||| || ||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||| |
|
|
T |
5447 |
tcagtttaatatctgatatatgggccaattgttcacacgatattaaatttattttttgaggtggagagtccaccacaatagcttgctattgggtctctca |
5546 |
T |
|
Q |
328 |
agtgtcgcctttgc |
341 |
Q |
|
|
|||||||||||||| |
|
|
T |
5547 |
agtgtcgcctttgc |
5560 |
T |
|
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Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 8128150 - 8128242
Alignment:
Q |
184 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaattt |
277 |
Q |
|
|
||||||| ||||||| |||||| ||||||||||| ||||||| | |||||||||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
T |
8128150 |
tttctcgttcttttggttaagattaagtgtagtatatgttctttttagtttaatatatgatatgtgggccaatggt-cacacaatattaaattt |
8128242 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 27134505 - 27134610
Alignment:
Q |
171 |
cacaaatcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatat |
270 |
Q |
|
|
|||| ||||||| ||| |||||||||| |||||||||| | |||||||||||||||| |||||||||||||||||||| | |||| || ||||||| |
|
|
T |
27134505 |
cacacatcatacctttttcggccttttcactaagatcaaatctagtatctgttcttattggtttaatatctgatatgtggtctaatgagtcaaacgatat |
27134604 |
T |
|
Q |
271 |
taaatt |
276 |
Q |
|
|
|||||| |
|
|
T |
27134605 |
taaatt |
27134610 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 15758608 - 15758562
Alignment:
Q |
179 |
atacatttctcggccttttggctaagatcaagtgtagtatctgttct |
225 |
Q |
|
|
|||| |||||| |||||||||||||||||||||||| |||||||||| |
|
|
T |
15758608 |
atacctttctcagccttttggctaagatcaagtgtaatatctgttct |
15758562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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