View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1681_high_31 (Length: 313)

Name: NF1681_high_31
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1681_high_31
NF1681_high_31
[»] chr4 (6 HSPs)
chr4 (18-299)||(3637377-3637658)
chr4 (212-284)||(11158366-11158438)
chr4 (260-291)||(1312878-1312909)
chr4 (187-285)||(35290195-35290293)
chr4 (253-293)||(28406942-28406982)
chr4 (182-270)||(52735081-52735169)
[»] chr6 (3 HSPs)
chr6 (186-277)||(31671090-31671181)
chr6 (232-293)||(4420652-4420713)
chr6 (185-283)||(9093566-9093664)
[»] chr5 (4 HSPs)
chr5 (182-277)||(36639481-36639576)
chr5 (230-299)||(37611209-37611278)
chr5 (230-299)||(37787939-37788008)
chr5 (155-286)||(9202755-9202887)
[»] chr8 (5 HSPs)
chr8 (253-299)||(4055610-4055656)
chr8 (223-293)||(37353249-37353319)
chr8 (229-293)||(11813105-11813169)
chr8 (248-299)||(43704370-43704421)
chr8 (209-293)||(11795078-11795162)
[»] chr2 (3 HSPs)
chr2 (253-299)||(39621981-39622027)
chr2 (253-293)||(5781699-5781739)
chr2 (183-291)||(22681187-22681295)
[»] chr1 (5 HSPs)
chr1 (153-217)||(49560635-49560700)
chr1 (211-277)||(12564515-12564581)
chr1 (183-293)||(31517740-31517850)
chr1 (223-293)||(34290236-34290306)
chr1 (232-292)||(5047155-5047215)
[»] chr3 (3 HSPs)
chr3 (186-242)||(3182413-3182469)
chr3 (255-299)||(41644439-41644483)
chr3 (253-293)||(50952363-50952403)
[»] scaffold0159 (1 HSPs)
scaffold0159 (253-293)||(27031-27071)
[»] chr7 (2 HSPs)
chr7 (253-289)||(26935561-26935597)
chr7 (183-291)||(38010674-38010782)


Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 3637658 - 3637377
Alignment:
Q  18 atgtcaagtatgatattttggctattttgttcatgaatagagtggacactaagcactcttggaagaggctaatttcagactggtcacatttggataaaca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3637658 atgtcaagtatgatattttggctattttgttcatgaatagagtggacactaagcactcttggaagaggctaatttcagactggtcacgtttggataaaca 3637559  T
Q  118 actcaattaggcgcttataacttaagcatttcgcaatataagtgcttatatgtaattattcctttaacaaaagataaaccaaatttaaatggttttcata 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3637558 actcaattaggcgcttataacttaagcatttcgcaatataagtgcttatatgtaattattcctttaacaaaagataaaccaaattcaaatggttttcata 3637459  T
Q  218 caagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3637458 caagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 3637377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 11158438 - 11158366
Alignment:
Q  212 ttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatg 284  Q
    ||||||||||||||| | ||||||| ||||| |||||  | |||||  |||||||||||||||||||||||||    
T  11158438 ttcatacaagttataagttgttttcataagctatcttagagagcttgtggaaataagctgaaaacagtttatg 11158366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 291
Target Start/End: Original strand, 1312878 - 1312909
Alignment:
Q  260 ggaaataagctgaaaacagtttatgaatatgt 291  Q
    ||||||||||||||||||||||||||||||||    
T  1312878 ggaaataagctgaaaacagtttatgaatatgt 1312909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 35290293 - 35290195
Alignment:
Q  187 aaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatga 285  Q
    |||||||||  ||| |||||| || |||||| |||||| | ||| ||||| ||||| ||||| || ||||||   ||||||||||||||||| ||||||    
T  35290293 aaagataaaataaagttaaattgtattcatataagttagaagcttttttcataagctatctttaagagcttactaaaataagctgaaaacagcttatga 35290195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 28406942 - 28406982
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||||| |||||||||||| ||| |||||||||||||||||    
T  28406942 agcttatggaaataagctgcaaatagtttatgaatatgtca 28406982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 52735081 - 52735169
Alignment:
Q  182 taacaaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagct 270  Q
    ||||||||||||||  ||| | ||||   ||||||| |||||||| | ||||||| ||||| ||||| || |||||| |||||||||||    
T  52735081 taacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagct 52735169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 31671181 - 31671090
Alignment:
Q  186 aaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaaca 277  Q
    |||||||||| |||| |||||| ||||||||| ||| |||| ||||||||| ||| | ||| |  |||||||| | ||||||||||||||||    
T  31671181 aaaagataaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaaca 31671090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 4420652 - 4420713
Alignment:
Q  232 ttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    ||||||||||| |||||  | |||||| ||||||||||||||||||| ||||||| ||||||    
T  4420652 ttttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtca 4420713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 9093664 - 9093566
Alignment:
Q  185 caaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttat 283  Q
    |||||||||||  ||| |||||| |||||| || ||| |||| ||||||||| |||||  ||||  | | |||||| ||||||||||||||||| ||||    
T  9093664 caaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttat 9093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 36639481 - 36639576
Alignment:
Q  182 taacaaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaaca 277  Q
    ||||||||||||||  ||| | |||  ||||||||||||||||||| |||||||| ||||| ||||| || |||||| | |||||||  |||||||    
T  36639481 taacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagagcttatgaaaataagaggaaaaca 36639576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 37611278 - 37611209
Alignment:
Q  230 tgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    ||||||| ||||| |||||  | |||||| |||||||| |||||||||| ||||||| ||||||||||||    
T  37611278 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagtt 37611209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 37788008 - 37787939
Alignment:
Q  230 tgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    ||||||| ||||| |||||  | |||||| |||||||| |||||||||| ||||||| ||||||||||||    
T  37788008 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagtt 37787939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 286
Target Start/End: Complemental strand, 9202887 - 9202755
Alignment:
Q  155 ataagtgcttatatgtaat-tattcctttaacaaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaata 253  Q
    |||||||||||||| |||  |||| || || |||||||||||  ||| |||||| ||||||||| |||  ||| ||||||||| ||||  ||||| || |    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaaga 9202788  T
Q  254 gcttaaggaaataagctgaaaacagtttatgaa 286  Q
     |||| | |||||||||| |||||| |||||||    
T  9202787 acttatgaaaataagctggaaacagcttatgaa 9202755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 4055656 - 4055610
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||    
T  4055656 agcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 4055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 37353319 - 37353249
Alignment:
Q  223 tataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||| ||||||||| ||||| |||||  | |||||| | |||||| |||||||||||||||||||||||||    
T  37353319 tataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtca 37353249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 11813169 - 11813105
Alignment:
Q  229 ctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||||||| ||||| |||||||| ||||||  ||||||||||||||||||  |||| ||||||||    
T  11813169 ctgttttcataagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatgtca 11813105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 43704421 - 43704370
Alignment:
Q  248 tcaatagcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    |||| |||||| ||||||||||| ||||||||||||||| |||||| |||||    
T  43704421 tcaaaagcttatggaaataagcttaaaacagtttatgaacatgtcataagtt 43704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 11795078 - 11795162
Alignment:
Q  209 gttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    ||||||||| |||||||| |||| |||| ||||| ||  |  | |||||| ||||||||||||||||||| ||||| | ||||||    
T  11795078 gttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtca 11795162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 39621981 - 39622027
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  39621981 agcttaaggaaataagctgaaaacaatttatgaatttgtcataagtt 39622027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 5781699 - 5781739
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||||| ||||||||||||||||||||||||| | ||||||    
T  5781699 agcttatggaaataagctgaaaacagtttatgcacatgtca 5781739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 22681295 - 22681187
Alignment:
Q  183 aacaaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagttta 282  Q
    ||||||||||||| ||||   |||| ||||||||| ||| |||| ||||||||| ||| | ||| |  | | |||| ||||||||||| ||||||| |||    
T  22681295 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagctta 22681196  T
Q  283 tgaatatgt 291  Q
    |||| ||||    
T  22681195 tgaacatgt 22681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 49560700 - 49560635
Alignment:
Q  153 atataagtgcttatatgtaat-tattcctttaacaaaagataaaccaaatttaaatggttttcata 217  Q
    |||||||||||||||| |||| ||||  | ||||||||||||||||||||| |||| |||||||||    
T  49560700 atataagtgcttatatataatatatttatataacaaaagataaaccaaattcaaattgttttcata 49560635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 12564581 - 12564515
Alignment:
Q  211 tttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaaca 277  Q
    ||||||||||| |||||| ||||||| ||||| |||||  | | |||| ||||||||||||||||||    
T  12564581 tttcatacaaggtataggttgttttcataagctatcttggagaacttatggaaataagctgaaaaca 12564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 31517850 - 31517740
Alignment:
Q  183 aacaaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagttta 282  Q
    |||||||||||||  ||| |||||| | ||||||| ||| |||| ||||| ||| ||| |  ||||  | |||||| | ||||||||||||||||| |||    
T  31517850 aacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagctta 31517751  T
Q  283 tgaatatgtca 293  Q
    |||| ||||||    
T  31517750 tgaacatgtca 31517740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 34290236 - 34290306
Alignment:
Q  223 tataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||| ||||||||| ||||| ||||| || | |||| | ||||||||||||||||  ||||||||||||||    
T  34290236 tataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtca 34290306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 5047155 - 5047215
Alignment:
Q  232 ttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagtttatgaatatgtc 292  Q
    ||||| ||||| ||| | || |||||| |||||||||||||||||||  ||||||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaacagcgtatgaatatgtc 5047215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 3182469 - 3182413
Alignment:
Q  186 aaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagc 242  Q
    ||||||||||  ||| | |||| |||||||||||||||||||||||||||| |||||    
T  3182469 aaaagataaaataaagtcaaattgttttcatacaagttataggctgttttcgtaagc 3182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 41644483 - 41644439
Alignment:
Q  255 cttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 299  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||    
T  41644483 cttaaggaaataagctgaaaacagcttatgaaaatgtcccaagtt 41644439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 50952363 - 50952403
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||||| ||||||||||| ||||||||||||||| ||||||    
T  50952363 agcttatggaaataagcttaaaacagtttatgaacatgtca 50952403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 27031 - 27071
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatatgtca 293  Q
    |||||| ||||||||||||||||||||||||| | ||||||    
T  27031 agcttatggaaataagctgaaaacagtttatgcacatgtca 27071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 26935597 - 26935561
Alignment:
Q  253 agcttaaggaaataagctgaaaacagtttatgaatat 289  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  26935597 agcttatggaaataagctgaaaacagcttatgaatat 26935561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 38010674 - 38010782
Alignment:
Q  183 aacaaaagataaaccaaatttaaatggttttcatacaagttataggctgttttcctaagcgatcttcaatagcttaaggaaataagctgaaaacagttta 282  Q
    ||||||||||||| ||||   |||| ||||||||| ||| |||| ||||||||| ||| | ||| |  | | |||| ||||||||||| ||||||| |||    
T  38010674 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagctta 38010773  T
Q  283 tgaatatgt 291  Q
    |||| ||||    
T  38010774 tgaacatgt 38010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 11141 times since January 2019
Visitors: 8059