View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_high_44 (Length: 249)
Name: NF1681_high_44
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1681_high_44 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 7328718 - 7328949
Alignment:
| Q |
12 |
atattgttattgttattgttattgcattcaataaatttatctttttaatgatttcaatcaccaattaaataatttaatttcaatccctactgctcaaatg |
111 |
Q |
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| T |
7328718 |
atattgttattgttattgttattgcattcaataaatttatctttttaatgattccaatcaccaattaaataatttaatttcaatccctactgctcaaatg |
7328817 |
T |
|
| Q |
112 |
catagactaatctctcaatctaggtaggagctctaaagattgcaatgttcgatttaacattgttggaatagaactcagaatctttggataagagggaaga |
211 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
7328818 |
catagactaatctctcaatctaggtaggagctctaaagattgcaatgttcgatttaacattgttggaatagaactcggaatctttggataagagggaaga |
7328917 |
T |
|
| Q |
212 |
tgtctcttattatctcattcaagtattatcta |
243 |
Q |
| |
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||||||||||||||||||||||| ||||||| |
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| T |
7328918 |
ggtctcttattatctcattcaagtgttatcta |
7328949 |
T |
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