View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_high_45 (Length: 246)
Name: NF1681_high_45
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1681_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 30896369 - 30896597
Alignment:
| Q |
3 |
gatgcccctaacatcaaataaaaaccaacttaagggattcacaagtcattaatattaannnnnnn-ccaaccatgattctaggcaaaccaaaaagataat |
101 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
30896369 |
gatgcccctaacatcaaataaaaaccaacttaagggattcacaagtcattaatattaattttttttccaaccatgattctaggcaaaccaaaaagataat |
30896468 |
T |
|
| Q |
102 |
aggccactcattagtattggttgaataggaaaaccatgtttcatatgtacactacatgtacattatttgtttgctttgatttatcccacagagtaaaatt |
201 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30896469 |
aggccactcattagtattggttgaataggaaaaccatgtttcatatgtacactacatgtacattatttgtttgctttgatttatcccacagagtaaaatt |
30896568 |
T |
|
| Q |
202 |
ggtgaaacaattatttgagtgtaatctat |
230 |
Q |
| |
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||||||||||||||||||||||||||||| |
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|
| T |
30896569 |
ggtgaaacaattatttgagtgtaatctat |
30896597 |
T |
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