View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_high_60 (Length: 234)
Name: NF1681_high_60
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1681_high_60 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 3388592 - 3388808
Alignment:
| Q |
1 |
tatttgcttacaattatcgagttagtagttaactaaagagagaaaagagggttagtggataagatcaagtcaatattatggagaaaataatgtannnnnn |
100 |
Q |
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||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |
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| T |
3388592 |
tattttctttcaattatcgagtgagtagttaactaaagagagaaaagagggttagtggataagatcaagtcaatattacggagaaaataacgtatttttt |
3388691 |
T |
|
| Q |
101 |
nccaataaaaacatgttttcatatttatcccgtataattatcagacaatatatttaaaacttttaaaatatgctctgtttacaacacattacacacaaaa |
200 |
Q |
| |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3388692 |
-ccaataaaaacatcttttcatatttatcccgtataattatcagacaatatatttaaaacttttaaaatatgctctgtttacaacacattacacacaaaa |
3388790 |
T |
|
| Q |
201 |
actttgaagcttttggag |
218 |
Q |
| |
|
|||||||||||||||||| |
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|
| T |
3388791 |
actttgaagcttttggag |
3388808 |
T |
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