View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1681_high_64 (Length: 232)
Name: NF1681_high_64
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1681_high_64 |
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[»] scaffold0440 (1 HSPs) |
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[»] chr6 (20 HSPs) |
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[»] chr3 (30 HSPs) |
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[»] chr7 (23 HSPs) |
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[»] chr5 (24 HSPs) |
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[»] chr8 (19 HSPs) |
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[»] chr1 (16 HSPs) |
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[»] chr2 (20 HSPs) |
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[»] scaffold0208 (2 HSPs) |
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[»] chr4 (30 HSPs) |
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[»] scaffold0363 (1 HSPs) |
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[»] scaffold0012 (1 HSPs) |
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[»] scaffold0236 (1 HSPs) |
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[»] scaffold1114 (1 HSPs) |
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[»] scaffold0085 (1 HSPs) |
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[»] scaffold0185 (2 HSPs) |
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Alignment Details
Target: scaffold0440 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 1243 - 1472
Alignment:
Q |
3 |
gcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggata |
102 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
1243 |
gcggaagcaaacaaaacattgaacatgattatgatcggatctacgatatgtttgatttatcaaggatattaagaattagggtattaggaatacctggata |
1342 |
T |
|
Q |
103 |
aagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctc |
202 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
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|
T |
1343 |
aagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactgatttggtttttcctc |
1442 |
T |
|
Q |
203 |
aaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
1443 |
aaccggtacatttatgcctcaagttctctt |
1472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 20)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 8650850 - 8651081
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
8650850 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
8650949 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
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|
T |
8650950 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
8651049 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
8651050 |
tcaaccggtacctttatgcctcaagttctctt |
8651081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 4580368 - 4580599
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
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|
T |
4580368 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttaccaaggatattaagaattagggtattaggaatacctgga |
4580467 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
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|
T |
4580468 |
taaagcttttgtaacaaccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacgcaatagagttagcggcggctgatttggttcttcc |
4580567 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
4580568 |
tcaaccggtacctttatgcctcaagttctctt |
4580599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 25354323 - 25354093
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
25354323 |
tagcggaagcaaacaaagcattgaacatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggaatacctgga |
25354225 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
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|
T |
25354224 |
taaagcttttgtagcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
25354125 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
25354124 |
tcaaccggtacctttatgcctcaagttctctt |
25354093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21190913 - 21191135
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||||| |
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|
T |
21190913 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgatatatttgatttatcaaagatattaagaattagggtattagaaatacctgga |
21191012 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
21191013 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatatgaaacacacaatagagttagcggcggctgatttggttcttcc |
21191112 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctca |
223 |
Q |
|
|
||||||||||| ||||||||||| |
|
|
T |
21191113 |
tcaaccggtacctttatgcctca |
21191135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 25343736 - 25343506
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||| || |
|
|
T |
25343736 |
tagcagaagcaaacaaaacattgaacatgattatgatcggatctacgacatttttgatttatcaag-atattaagaattagagtattaggaatacctaga |
25343638 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
25343637 |
taaagcttttgtagcagccctttcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
25343538 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
25343537 |
tcaaccggtacctttatgcctcaagttctctt |
25343506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32035333 - 32035488
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
32035333 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggttattaagaattagggtattaggaatacctgga |
32035432 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgat |
156 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
32035433 |
taaacctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgat |
32035488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21782800 - 21782941
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
21782800 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatagctgga |
21782899 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaa |
142 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
21782900 |
taaagctttcaaggcagccctctcatcaacaacgataaccaa |
21782941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 31756265 - 31756498
Alignment:
Q |
4 |
cggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataa |
103 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
31756265 |
cggaagcaaataaaacattgaacatgattataatcggatctacgacatgtttgaattatcaaggatattaagaattagggtattatgaatatctggatag |
31756364 |
T |
|
Q |
104 |
agctttcaaggcatccctctcatcaacaacgataaccaaagagagga---gatgatctgaaacagaca--atagagttagcggcggctgatttggttttt |
198 |
Q |
|
|
|||||||| | || |||||||| || |||| ||| || |||||||| |||||||||||||| ||| |||| |||||||||||||||||||||| || |
|
|
T |
31756365 |
agctttcatgacagccctctcaacagcaaccatacacagagagaggaggtgatgatctgaaacacacaatatagggttagcggcggctgatttggttctt |
31756464 |
T |
|
Q |
199 |
cctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| ||||| ||||| |||||||||||||| |
|
|
T |
31756465 |
cctcaacaggtacctttatacctcaagttctctt |
31756498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8662828 - 8662922
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatac |
95 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
T |
8662828 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatac |
8662922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 17581738 - 17581514
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| | |||||||||||||||||||||||||||| |
|
|
T |
17581738 |
tagcggaagcaaacaaaacattgaacatgattattataggatctacgacatgtttgatttacc---------aagaattagggtattaggaatacctgga |
17581648 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataacca-aagagaggagatgatctgaaacagaca-atagagttagcggcggctgatttggttttt |
198 |
Q |
|
|
||||||||||| | || |||||||| ||||||| | || | ||||||||| ||||||||| || ||| | ||||| ||| |||||||||||| || |
|
|
T |
17581647 |
taaagctttcatgacagccctctcaacaacaacaacgacaaggagagaggaggtgatctgaagcaaacatcaacggttagtggcagctgatttggttctt |
17581548 |
T |
|
Q |
199 |
cctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| ||||||||||||||||||||||||| |
|
|
T |
17581547 |
cctcaacttgtacatttatgcctcaagttctctt |
17581514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 21783356 - 21783486
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| | |
|
|
T |
21783356 |
tagcggaagcaaacaaaacattgaacataaatatgaacggatctacgacatgtttgatttatcaaggatatcaagaatta--gtattaggaatacctgaa |
21783453 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaac |
133 |
Q |
|
|
||||||||| | |||| |||||||| ||||||| |
|
|
T |
21783454 |
taaagcttttatggcacccctctcaacaacaac |
21783486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 21789579 - 21789709
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| | |
|
|
T |
21789579 |
tagcggaagcaaacaaaacattgaacataaatatgaacggatctacgacatgtttgatttatcaaggatatcaagaatta--gtattaggaatacctgaa |
21789676 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaac |
133 |
Q |
|
|
||||||||| | |||| |||||||| ||||||| |
|
|
T |
21789677 |
taaagcttttatggcacccctctcaacaacaac |
21789709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 21197068 - 21197308
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||| ||||||||| |||||||| ||||||||||||||| |||||||| |||||| ||||||||||| |
|
|
T |
21197068 |
tagcggaagcaaacaaaacattgaacataagtatgaacggatctacaacatgtttgatttatcaaggatatcaagaatta--gtattatgaatacctgga |
21197165 |
T |
|
Q |
101 |
taaagctttcaaggcatccctct---catcaacaacgataaccaaagagaggagatgatctgaaacagaca--------at--agagttagcggcggctg |
187 |
Q |
|
|
|||| |||| | |||| |||||| || |||||||||||| ||||||||| |||| || |||| ||| || | |||||||||||||| |
|
|
T |
21197166 |
taaatcttttatggcagccctctcaacaacaacaacgataa--ggagagaggaggtgatatggaacaaacatcaacttcatcaacggttagcggcggctg |
21197263 |
T |
|
Q |
188 |
atttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||| |||||||||||||| |||||||||||||||||||| |
|
|
T |
21197264 |
atttggttcttcctcaaccggtatctttatgcctcaagttctctt |
21197308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 21770609 - 21770845
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaa |
104 |
Q |
|
|
||||| |||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| ||| ||||| |
|
|
T |
21770609 |
ggaagtaaacaaaacattgaacataaatatgaacggatctacgacatgtttgatttatcaaggatatcaagaatta--gtattaggaatatctgaataaa |
21770706 |
T |
|
Q |
105 |
gctttcaaggcatccctct---catcaacaacgataaccaaagagaggagatgatctgaaacagaca--------at--agagttagcggcggctgattt |
191 |
Q |
|
|
||||| | |||| |||||| || |||||||||||| ||| ||||| |||||||||||| ||| || | |||||| ||||||||||| |
|
|
T |
21770707 |
gcttttatggcagccctctcaacaacaacaacgataa--ggagataggaggtgatctgaaacaaacatcaacttcatcaacggttagcagcggctgattt |
21770804 |
T |
|
Q |
192 |
ggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
21770805 |
ggttcttcctcaaccggtacctttatgcctcaagttctctt |
21770845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18778695 - 18778564
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaatta-gggtattaggaatacctgg |
99 |
Q |
|
|
||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||| |
|
|
T |
18778695 |
tagcggaagcaaacaaaacgttgaacataattatgatcggatctacgacgtatttgatttatcaa-tatattaagaattaggggttttaggaatacctgg |
18778597 |
T |
|
Q |
100 |
ataaagctttcaaggcatccctctcatcaacaa |
132 |
Q |
|
|
||||| |||||| |||| |||||| | |||||| |
|
|
T |
18778596 |
ataaaactttcatggcagccctcttaacaacaa |
18778564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 34603382 - 34603457
Alignment:
Q |
6 |
gaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattag |
81 |
Q |
|
|
|||||||||||| |||||||||| |||||||||||||||| | ||||||| |||||||||||||||||| |||||| |
|
|
T |
34603382 |
gaagcaaacaaagcattgaacataattatgatcggatctatggcatgtttgatttatcaaggatattaacaattag |
34603457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 34724659 - 34724734
Alignment:
Q |
6 |
gaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattag |
81 |
Q |
|
|
|||||||||||| |||||||||| |||||||||||||||| | ||||||| |||||||||||||||||| |||||| |
|
|
T |
34724659 |
gaagcaaacaaagcattgaacataattatgatcggatctatggcatgtttgatttatcaaggatattaacaattag |
34724734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6098089 - 6097999
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatac |
95 |
Q |
|
|
||||||||| | |||||||||||||||||| || |||||||||||| ||||| |||||||||| || ||||||||||||||||||||||||| |
|
|
T |
6098089 |
tagcggaagtagacaaaacattgaacatgaa---gaacggatctacgacgtgtttgatttatcaag-atgttaagaattagggtattaggaatac |
6097999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 1106294 - 1106229
Alignment:
Q |
33 |
atgatcggatctacgacatgttttatttatcaaggatattaagaatt-agggtattaggaatacct |
97 |
Q |
|
|
|||||||||||||| |||||||| ||| |||||| ||||||| |||| | |||||||||||||||| |
|
|
T |
1106294 |
atgatcggatctacaacatgtttgattcatcaagaatattaataattcaaggtattaggaatacct |
1106229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 20745497 - 20745438
Alignment:
Q |
173 |
agttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||| | || ||||||||||||||||| |||||| |||| ||| ||||||||||| |
|
|
T |
20745497 |
agttagcggtgactaatttggtttttcctcaatcggtacttttaagccccaagttctctt |
20745438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 11839772 - 11840003
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11839772 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
11839871 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
11839872 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
11839971 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
11839972 |
tcaaccggtacctttatgcctcaagttctctt |
11840003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10244381 - 10244612
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
10244381 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
10244480 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
10244481 |
taaagctttcaagacagccctctcatcaacaacgataaccaaagagaggagatgatatgaaacacacaatagagttagcggcggctgatttggttcttcc |
10244580 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
10244581 |
tcaaccggtacatttatgcctcaagttctctt |
10244612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 38455597 - 38455828
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38455597 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacaacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
38455696 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
38455697 |
taaagctttcgaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
38455796 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
38455797 |
tcaaccggtacctttatgcctcaagttctctt |
38455828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 8331899 - 8331668
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
8331899 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
8331800 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
8331799 |
taaagctttcaaggcagccctctcgtcaacaacgataaccaaagagaggagatgatctaaaacacacaatagagttagcggcggctgatttggttcttcc |
8331700 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
8331699 |
tcaaccggtacctttatgcctcaagttctctt |
8331668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10760697 - 10760928
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10760697 |
tagcggaagcaaataaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
10760796 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |
|
|
T |
10760797 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactgatttggttcttcc |
10760896 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| |||||||||||||||||||| |
|
|
T |
10760897 |
tcaaccagtacctttatgcctcaagttctctt |
10760928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 38449110 - 38449341
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38449110 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacaacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
38449209 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
38449210 |
taaaactttcgaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
38449309 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
38449310 |
tcaaccggtacctttatgcctcaagttctctt |
38449341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10238259 - 10238490
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
10238259 |
tagcggaagcaaacaaaacattgaacatgattatgatcagatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
10238358 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
10238359 |
taaagctttcaagacagccctctcatcaacaacgataaccaaagagaggatatgatatgaaacacacaatagagttagcggcggctgatttggttcttcc |
10238458 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
10238459 |
tcaaccggtacatttatgcctcaagttctctt |
10238490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 42191267 - 42191498
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
42191267 |
tagcggaagcaaacaaaacattgaacctgattatgatcggatctacgacatgtttgatttatcaagggtattaagaattagggtattaggaatacctgga |
42191366 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
T |
42191367 |
taaagctttcaaggcagccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcc |
42191466 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
42191467 |
tcaaccggtacctttatgcctcaagttctctt |
42191498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 42197209 - 42197440
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
42197209 |
tagcggaagcaaacaaaacattgaacctgattatgatcggatctacgacatgtttgatttatcaagggtattaagaattagggtattaggaatacctgga |
42197308 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
T |
42197309 |
taaagctttcaaggcagccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcc |
42197408 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
42197409 |
tcaaccggtacctttatgcctcaagttctctt |
42197440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 17055840 - 17056071
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
17055840 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
17055939 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||| ||| |||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
17055940 |
taaagctttcatagcagccctctaatcaacaacggtaaccaaagataggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
17056039 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
17056040 |
tcaaccggtacctttatgcctcaagttctctt |
17056071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 49151724 - 49151493
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
T |
49151724 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttattaaggatattaagaattagggtattatgaatacctgga |
49151625 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| || |||| |
|
|
T |
49151624 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttgattcttcc |
49151525 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| ||||||||||| |||||||| |
|
|
T |
49151524 |
tcaaccggtacctttatgcctcacgttctctt |
49151493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 49157791 - 49157560
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
T |
49157791 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttattaaggatattaagaattagggtattatgaatacctgga |
49157692 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| || |||| |
|
|
T |
49157691 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttgattcttcc |
49157592 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| ||||||||||| |||||||| |
|
|
T |
49157591 |
tcaaccggtacctttatgcctcacgttctctt |
49157560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 30051149 - 30051380
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30051149 |
tagcggaagcaaacaaaatattgaacatgattataatcagatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
30051248 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||| || |||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||| |
|
|
T |
30051249 |
taaagctttcattacagccctctaatcgacaacaataaccaaagagaggagatgatctgaaacacacaatagagttagcgacggctgatttgattcttcc |
30051348 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
30051349 |
tcaaccggtacctttatgcctcaagttctctt |
30051380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 11846110 - 11846340
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
11846110 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaagtatattaagaattagggtattaggaatacctgga |
11846209 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctga-tttggtttttc |
199 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |
|
|
T |
11846210 |
taaagcttttgtaacagccctctcatcaacaacgataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctgattttggttcttc |
11846309 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctc |
230 |
Q |
|
|
||||||||| || |||||||| ||||||||| |
|
|
T |
11846310 |
ctcaaccggaacctttatgccgcaagttctc |
11846340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 55003459 - 55003687
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||| |
|
|
T |
55003459 |
tagcagaagcaaataaaacattgaacatgattatgatcggatctacgacatgtttaatttatcaagtatattaagaattagggtattagaaatatctgga |
55003558 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||| |
|
|
T |
55003559 |
taaagctttcatagcagccctctaatcaacaacgataaccaaagagaaaagatgatctgaaatacacaatagagttagcggcggctgatttgg---ttcc |
55003655 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||| |||||| |||||||||||||||||||| |
|
|
T |
55003656 |
tcaatcggtacctttatgcctcaagttctctt |
55003687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 17593331 - 17593481
Alignment:
Q |
3 |
gcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggata |
102 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
17593331 |
gcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttaatttatcaagaatattaagaattagggtattaggaatacctggata |
17593430 |
T |
|
Q |
103 |
aagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagat |
153 |
Q |
|
|
|| ||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
17593431 |
aacctttcgaggcagccctctcatcaacaacgataaccaaagagaggagat |
17593481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10766919 - 10767038
Alignment:
Q |
2 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggat |
101 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10766919 |
agcggaagcaaacaaaacattgaacatgattatgaccggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctggat |
10767018 |
T |
|
Q |
102 |
aaagctttcaaggcatccct |
121 |
Q |
|
|
||||||||||||||| |||| |
|
|
T |
10767019 |
aaagctttcaaggcagccct |
10767038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 232
Target Start/End: Complemental strand, 13445144 - 13444939
Alignment:
Q |
30 |
attatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatccctctcatcaa |
129 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | |||| | || | |||||| || |
|
|
T |
13445144 |
attatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctagataaaacattcatgacagctctctcagtaa |
13445045 |
T |
|
Q |
130 |
caacgataaccaaa---gagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagt |
226 |
Q |
|
|
|||| |||| |||| |||| | ||||||||||| || | || || ||||| |||||||||||||||| ||||||||||| ||| |||||||||||||| |
|
|
T |
13445044 |
caaccataaacaaagaggagatgtgatgatctgaaccacaaaacagggttagtggcggctgatttggttcttcctcaaccgatacttttatgcctcaagt |
13444945 |
T |
|
Q |
227 |
tctctt |
232 |
Q |
|
|
|||||| |
|
|
T |
13444944 |
tctctt |
13444939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 10769133 - 10769247
Alignment:
Q |
118 |
ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatttat |
217 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
T |
10769133 |
ccctctcatcaacaacgataaccaaagagaggagatgatctgaaatacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat |
10769232 |
T |
|
Q |
218 |
gcctcaagttctctt |
232 |
Q |
|
|
||||||||||||||| |
|
|
T |
10769233 |
gcctcaagttctctt |
10769247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34300609 - 34300485
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| | |
|
|
T |
34300609 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatatttgatttataaaggatattaagaattagggtattaggaatacctgaa |
34300510 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctca |
125 |
Q |
|
|
| ||||||||| |||| |||||||| |
|
|
T |
34300509 |
ttaagctttcatggcaaccctctca |
34300485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 53069101 - 53069316
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaatta-gggtattaggaatacctgg |
99 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||| |||||||||| |
|
|
T |
53069101 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctatgacatgtttgatttatcaaggatattaagaatcaggggtattaagaatacctgg |
53069200 |
T |
|
Q |
100 |
ataaagctttcaaggcatccctctcatcaacaacgataacca--aagagaggagatgatctgaaacagac--aatagagttagcggcggctgatttggtt |
195 |
Q |
|
|
||||| |||||| || | | ||| | ||||||| | || | | || | |||||||||||||| || |||| |||||||||||||||||||||| |
|
|
T |
53069201 |
ataaaactttcatggtagtcatcttaacaacaacaacaaagatgagaaggtgtgatgatctgaaacacacaaaatatggttagcggcggctgatttggtt |
53069300 |
T |
|
Q |
196 |
tttcctcaaccggtac |
211 |
Q |
|
|
||||||||||||||| |
|
|
T |
53069301 |
cttcctcaaccggtac |
53069316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 48128094 - 48128318
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggta-ttaggaatacctgg |
99 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| || ||||||||| | |
|
|
T |
48128094 |
tagcggaaacaaacaaaacattgaacatgattatgatcggttctacgacatgtttgatttattaagaatattaagaattagggtattttggaatacct-g |
48128192 |
T |
|
Q |
100 |
ataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttc |
199 |
Q |
|
|
||||| |||||| |||| |||||| |||||||| | ||| | | ||| ||||||| |||| |||| | |||||| ||||||||||||||| ||| |
|
|
T |
48128193 |
ataaaactttcatggca--gctctca-caacaacggt----aaaaaaatgaggtgatctggaacaaacaacaatgttagcagcggctgatttggttcttc |
48128285 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| ||||| ||||||||| ||||||||| |
|
|
T |
48128286 |
ctcaactggtacctttatgcctttagttctctt |
48128318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 13837632 - 13837555
Alignment:
Q |
155 |
atctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
13837632 |
atctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctctt |
13837555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28964980 - 28964881
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || | ||| | |||||||||||||||| |
|
|
T |
28964980 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaagatatcaatagtta-gaaattaggaatacctgga |
28964882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 46656796 - 46656638
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||| ||| |||||||| || || ||||||||||||||||||| |||||| ||||||||| |||||| ||||| |||||||||| |||||||| | |
|
|
T |
46656796 |
tagctgaagtaaataaaacattcaatataattatgatcggatctacgatatgtttgatttatcaatgatattgagaatgagggtattagaaatacctgaa |
46656697 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgat---aaccaaagagaggagatgat |
156 |
Q |
|
|
| ||||||||| | || |||||||| |||||||||| || ||| ||||||||||||| |
|
|
T |
46656696 |
tgaagctttcatgacaaccctctcaacaacaacgatctaaaacaaggagaggagatgat |
46656638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 12108716 - 12108945
Alignment:
Q |
3 |
gcggaagcaaa-caaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggat |
101 |
Q |
|
|
||||||||||| |||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| ||||||| ||||||||| || |
|
|
T |
12108716 |
gcggaagcaaatcaaaacattgaatatgattatgatttgatctaagacatgtttgatttatcaaggatattaacaatta-ggtattaagaatacctgaat |
12108814 |
T |
|
Q |
102 |
aaagctttcaaggcatccctctcatcaacaacgat---aaccaaagagaggagatgatctgaaacagacaataga-gttagcggcggctgatttggtttt |
197 |
Q |
|
|
||||| | | | || || ||| | || |||| | || | ||||| ||| |||| ||||||| |||| | | |||||||||| ||||||||||| | |
|
|
T |
12108815 |
gaagctctaatgacaaccttctgaacatgaacggtctgaaacggagagatgaggtgatatgaaacacacaacataggttagcggcgactgatttggttct |
12108914 |
T |
|
Q |
198 |
tcctcaaccggtacatttatgcctcaagttc |
228 |
Q |
|
|
|| | ||||||||| |||||||||||||||| |
|
|
T |
12108915 |
tctttaaccggtacctttatgcctcaagttc |
12108945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 26429639 - 26429695
Alignment:
Q |
176 |
tagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
26429639 |
tagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctctt |
26429695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 34300429 - 34300371
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| || |||||||| ||| ||||||||||| || ||||||||||||||||| |
|
|
T |
34300429 |
gttagcggcgacttatttggttattcttcaaccggtactttcatgcctcaagttctctt |
34300371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24643599 - 24643665
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatga------ttatgatcggatctacgacatgttttattta |
61 |
Q |
|
|
||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||| |
|
|
T |
24643599 |
tagcggaagtaaataaaacattgaacatgattatgattatgatcggatctacgatatgttttattta |
24643665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 24643773 - 24643815
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacattta |
216 |
Q |
|
|
|||||||||||||||||||||| || |||||||||||| |||| |
|
|
T |
24643773 |
gttagcggcggctgatttggttctttctcaaccggtaccttta |
24643815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 28421006 - 28421237
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
28421006 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
28421105 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
28421106 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
28421205 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
28421206 |
tcaaccggtacctttatgcctcaagttctctt |
28421237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3817358 - 3817589
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3817358 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
3817457 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
3817458 |
taaagctttcaaggcaaccctctcatcaacaacgataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
3817557 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| |||||||||||||||||||| |
|
|
T |
3817558 |
tcaaccagtacctttatgcctcaagttctctt |
3817589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 20239063 - 20238832
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
20239063 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
20238964 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
20238963 |
taaagctttcaaggcagccctctcatcaacaacaataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
20238864 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
20238863 |
tcaaccggtacctttatgcctcaagttctctt |
20238832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3811216 - 3811447
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3811216 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
3811315 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
3811316 |
taaagctttcaaggcaaccctctcatcaacaacgataacaaaagagagaagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
3811415 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| |||||||||||||||||||| |
|
|
T |
3811416 |
tcaaccagtacctttatgcctcaagttctctt |
3811447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 351897 - 351668
Alignment:
Q |
2 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggat |
101 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
351897 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctggat |
351798 |
T |
|
Q |
102 |
aaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcct |
201 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||| |
|
|
T |
351797 |
aaagctttcaaggcagccctctcatcaacaacgataaccaaa-agaggagatgatctgaaacacacaatagagttagcggcggctgatttgattcttcct |
351699 |
T |
|
Q |
202 |
caaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| |||||||||||||||||||| |
|
|
T |
351698 |
caaccggtacctttatgcctcaagttctctt |
351668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 5979221 - 5979452
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||| |
|
|
T |
5979221 |
tagcgaaagcaaacaaactattgaacatgattatgattggatctacgacatgtttgatttattaaggatgttaagaattagggtattaggaatacctgga |
5979320 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||| |
|
|
T |
5979321 |
taaagcttttgtagcagctctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcc |
5979420 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
5979421 |
tcaaccggtacttttatgcctcaagttctctt |
5979452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 339483 - 339261
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
339483 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
339384 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaac---gataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttt |
197 |
Q |
|
|
||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |
|
|
T |
339383 |
taaagct------------ctctcatcaacaacaatgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttgattct |
339296 |
T |
|
Q |
198 |
tcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||| |||||||||||||||||||| |
|
|
T |
339295 |
tcctcaaccggtacctttatgcctcaagttctctt |
339261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 15843988 - 15843828
Alignment:
Q |
72 |
taagaattagggtattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaata |
171 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||| |||||| |||||| |
|
|
T |
15843988 |
taagaattagggtattaggaatacctggatcaagctttcatagcagccctctaatcaacaacaataaccaaagagaggagatgatcggaaacacacaata |
15843889 |
T |
|
Q |
172 |
gagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
T |
15843888 |
gagttagcggcggctgatttggttcttcctcaactggtacatttatgcctcaagttctctt |
15843828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 15861097 - 15860937
Alignment:
Q |
72 |
taagaattagggtattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaata |
171 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||| |||||| |||||| |
|
|
T |
15861097 |
taagaattagggtattaggaatacctggatcaagctttcatagcagccctctaatcaacaacaataaccaaagagaggagatgatcggaaacacacaata |
15860998 |
T |
|
Q |
172 |
gagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
T |
15860997 |
gagttagcggcggctgatttggttcttcctcaactggtacatttatgcctcaagttctctt |
15860937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 42767342 - 42767501
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
42767342 |
tagcggaagcaaacaaaatattgaacatgattatgatcggatctacgacatatttgatttatcaaggatattaagaattagggtattaggaatatctgga |
42767441 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctga |
160 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
T |
42767442 |
taaagcttttgtagcagccctctcatcaacaacgataatcaaagagagaagatgatctga |
42767501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 43540097 - 43539861
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||| ||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||||| ||||||||||| |
|
|
T |
43540097 |
tagcggaattaaataaaatattgaacatgattatgatcggatctacaacatgtttgatttatcaagaatattaaaaattagggtattatgaatacctgga |
43539998 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagagga---gatgatctgaaacagac--aatagagttagcggcggctgatttggtt |
195 |
Q |
|
|
| ||||||| | || ||||||| |||||||||||| ||||||||||| |||||||||||||| || |||| |||||||||| ||||||||||| |
|
|
T |
43539997 |
tgaagctttgataacaatcctctcaacaacaacgataaacaaagagaggaggtgatgatctgaaacacacaaaatatggttagcggcgactgatttggtt |
43539898 |
T |
|
Q |
196 |
tttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| |||| ||||||||| |||||||||| |
|
|
T |
43539897 |
cttcctcaaccagtacctttatgcctaaagttctctt |
43539861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35148051 - 35148287
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaatta-gggtattaggaatacctgg |
99 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
35148051 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacacgtttgatttatcaaggatattaagaattaggggtattaggaatacctgg |
35148150 |
T |
|
Q |
100 |
ataaagctttcaaggcatccctctcatcaacaacgataacca--aagagaggagatgatctgaaacagac--aatagagttagcggcggctgatttggtt |
195 |
Q |
|
|
|||||||||||| || | ||||| | ||||||| | || | | || | |||||||||||||| || |||| || ||| ||||||||||||||| |
|
|
T |
35148151 |
ataaagctttcatggtagccctcgtaacaacaacaacaaatatgagaaggtgggatgatctgaaacacacaaaatatggtcagcagcggctgatttggtt |
35148250 |
T |
|
Q |
196 |
tttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||||| |||||||||||| ||||||| |
|
|
T |
35148251 |
cttcctcaaccggtacctttatgcctcaaattctctt |
35148287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 5849637 - 5849411
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||| ||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
T |
5849637 |
tagcggaagcaaccaaaacattgaacataaatatgaacggatctacgacatgtttgatttatcaaggatatcaagaattaggatattaggaatacctgga |
5849538 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaataga-gttagcggcggctgatttggtttttc |
199 |
Q |
|
|
| ||||||| | | || | |||||| |||||||||| |||| ||||||||||| | |||| | | |||||||||| ||||||||||| ||| |
|
|
T |
5849537 |
tgaagctttaatgacagctctctcaacaacaacgat------ggagaaactatgatctgaaatacacaacatatgttagcggcgtctgatttggttcttc |
5849444 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||| ||||||||||||||| |||| |
|
|
T |
5849443 |
ctcaaccggtacctttatgcctcaagttatctt |
5849411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 22741972 - 22742207
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| || |||| ||||||||||||||||||| |
|
|
T |
22741972 |
tagcggaagcaaactgaacattgaacatgattatgatcggatctacgacatgtttgatttatcaa-gatattgaggatta-ggtattaggaatacctgga |
22742069 |
T |
|
Q |
101 |
taaagctttcaaggcatccctc-tcatcaacaacgataaccaaagagaggagatgatctgaaacaga---------caatagagttagcggcggctgatt |
190 |
Q |
|
|
| ||||| | |||| ||||| | | ||||||||| |||||||||||||||||||||||| | ||| | ||||||||||||||||| |
|
|
T |
22742070 |
tgaagctatggtggcagccctcttgacaaacaacgat----aaagagaggagatgatctgaaacaaatatcaacatcaacacggttagcggcggctgatt |
22742165 |
T |
|
Q |
191 |
tggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
T |
22742166 |
tggtttttcatcaactggtacctttatgcctcaagttctctt |
22742207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 26383729 - 26383603
Alignment:
Q |
10 |
caaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagcttt |
109 |
Q |
|
|
||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||| ||||||| |
|
|
T |
26383729 |
caaacaaaatattgaacatgatcatgatcggatctacgacatgtttgatttatcaagcatactaagaattagggtattaggaataccttgatgaagcttt |
26383630 |
T |
|
Q |
110 |
caaggcatccctctcatcaacaacgat |
136 |
Q |
|
|
| |||| |||||||| |||||||||| |
|
|
T |
26383629 |
gatggcagccctctcaacaacaacgat |
26383603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 30219293 - 30219438
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||| |||||||||| |||||||||| ||||| |||||||||||||||||| |||||| || |||||||||||||| ||||||||||||| ||||| |
|
|
T |
30219293 |
tagcggaatcaaacaaaacgttgaacatgaatatgaacggatctacgacatgtttgatttattaaagatattaagaattatggtattaggaatatctgga |
30219392 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagag |
146 |
Q |
|
|
||||||||||| | || || ||||| || ||||||||| ||||||| |
|
|
T |
30219393 |
taaagctttcatgacaaccatctcagcatcaacgataaacaaagag |
30219438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 12804112 - 12803893
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacct--g |
98 |
Q |
|
|
|||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| | |
|
|
T |
12804112 |
tagcggaagcaagcaaaacattgaacatgaacatgaacggatctacgacatgtttgatttatcaagaatattaagaattagggtattaagaatacctggg |
12804013 |
T |
|
Q |
99 |
gataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga---caatagagttagcggcggctgatttggtt |
195 |
Q |
|
|
||| ||||||| ||| ||||||| |||||||||| ||||||||||| |||| ||||||| | ||| | ||||||| || |||||| |||| |
|
|
T |
12804012 |
gatgaagctttggtagcagccctctcgacaacaacgat----aaagagaggaggtgatttgaaacaaacatcaacatggttagcgacgactgattaggtt |
12803917 |
T |
|
Q |
196 |
tttcctcaaccggtacatttatgc |
219 |
Q |
|
|
||||||||||||||| ||||||| |
|
|
T |
12803916 |
cttcctcaaccggtacctttatgc |
12803893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 7608475 - 7608324
Alignment:
Q |
83 |
gtattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagag--ttagcg |
180 |
Q |
|
|
||||||| |||| ||| |||||||||| | | || | |||||||||||| |||||||||||||| |||||||||||||||| ||| || | |||||| |
|
|
T |
7608475 |
gtattagaaatatctgaataaagctttgatgacagtcatctcatcaacaatgataaccaaagagatgagatgatctgaaacacacataagcggattagcg |
7608376 |
T |
|
Q |
181 |
gcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||| |||||||||| ||||| || |||||| |||||| ||||||||||||| |
|
|
T |
7608375 |
gcgactgatttggtacttcctaaatcggtacctttatgactcaagttctctt |
7608324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 35150736 - 35150819
Alignment:
Q |
151 |
gatgatctgaaacagacaataga--gttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||| |||| | | |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
T |
35150736 |
gatgatctgaaacacacaaaatatggttagcggcggctgatttggttattcttcaaccggtacctttatgcctcaagttctctt |
35150819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 18666547 - 18666622
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattag |
81 |
Q |
|
|
|||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| ||| |||||||| |||||| |
|
|
T |
18666547 |
ggaagcaaacaaaacattgaacttgattatgatcagat-tacgacatgtttgatttagcaatgatattaataattag |
18666622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 26381023 - 26380965
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||| ||||||||| ||||| |||| |
|
|
T |
26381023 |
gttagcggcggctgatttggttcttcctcaactgctacctttatgcctaaagttttctt |
26380965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 26381135 - 26381056
Alignment:
Q |
56 |
tatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgat |
136 |
Q |
|
|
||||||||||| || |||||||||||||||||||| || |||||| ||||||| | | || |||||||| |||||||||| |
|
|
T |
26381135 |
tatttatcaagcatgctaagaattagggtattaggagta-ctggatgaagctttgatgacaaccctctcaacaacaacgat |
26381056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 24690881 - 24690848
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccg |
207 |
Q |
|
|
|||||||||||||||||||||| ||||||||||| |
|
|
T |
24690881 |
gttagcggcggctgatttggttcttcctcaaccg |
24690848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 12686226 - 12686457
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
12686226 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
12686325 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
12686326 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
12686425 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
12686426 |
tcaaccggtacctttatgcctcaagttctctt |
12686457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 12692328 - 12692559
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
12692328 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
12692427 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
12692428 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
12692527 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
12692528 |
tcaaccggtacctttatgcctcaagttctctt |
12692559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 28525433 - 28525664
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
T |
28525433 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttattaaggatattaagaattagggtattatgaatacctgga |
28525532 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| || |||| |
|
|
T |
28525533 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagtcagcggtggctgatttgattcttcc |
28525632 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| ||||||||||| |||||||| |
|
|
T |
28525633 |
tcaaccggtacctttatgcctcacgttctctt |
28525664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 28531529 - 28531760
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
T |
28531529 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttattaaggatattaagaattagggtattatgaatacctgga |
28531628 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| || |||| |
|
|
T |
28531629 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagtcagcggtggctgatttgattcttcc |
28531728 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| ||||||||||| |||||||| |
|
|
T |
28531729 |
tcaaccagtacctttatgcctcacgttctctt |
28531760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 7389595 - 7389825
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
7389595 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatccacgacatgtttgatttatcaag-atattaagaattagggtattaggaatacctgga |
7389693 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |
|
|
T |
7389694 |
taaagcttttgtagccgctctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactgatttggttcttcc |
7389793 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
7389794 |
tcaaccggtacctttatgcctcaagttctctt |
7389825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 41297389 - 41297170
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
41297389 |
tagcagaagcaaacaaaacattgaacataattatgatcggatctacgacatgtttgatttatcaaggatataaagaattagggtattaggaatacctgg- |
41297291 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
41297290 |
-----ctttcaaggcaaccctctcatcaacaacgataaccaaggagaggaggtgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
41297196 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagt |
226 |
Q |
|
|
||||||||||| |||||||||||||| |
|
|
T |
41297195 |
tcaaccggtacctttatgcctcaagt |
41297170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 20500231 - 20500020
Alignment:
Q |
20 |
attgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatcc |
119 |
Q |
|
|
|||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||| |||||||||||||| |||| | |||| || |
|
|
T |
20500231 |
attgaacatgattatgatcggatctacgacatacttgatttatcaaggatactaagaattagagtattagaaatacctggataaaacttttatggcagcc |
20500132 |
T |
|
Q |
120 |
ctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatttatgc |
219 |
Q |
|
|
|||||| || ||||||||| || ||||| || ||||||||||| |||| | |||||| |||| |||||||||| ||||| ||||||||||||||||| |
|
|
T |
20500131 |
ctctcaacatcaacgataaacagagaga-aaggcgatctgaaacaaacaagaaggttagcagcggttgatttggttcttccttaaccggtacatttatgc |
20500033 |
T |
|
Q |
220 |
ctcaagttctctt |
232 |
Q |
|
|
||||||||||||| |
|
|
T |
20500032 |
ctcaagttctctt |
20500020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 5 - 232
Target Start/End: Complemental strand, 30772392 - 30772163
Alignment:
Q |
5 |
ggaagcaaacaaaa-cattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataa |
103 |
Q |
|
|
|||||||||||||| || |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
30772392 |
ggaagcaaacaaaaacaatgaacatgattatgatcggatcgacaacatgtttgatttatcaaggatattaagaattagggtattaggattacctggataa |
30772293 |
T |
|
Q |
104 |
agctttcaaggcatccctctcatcaacaacgataaccaa-ag-agaggagatgatctgaaacagaca--atagagttagcggcggctgatttggtttttc |
199 |
Q |
|
|
|| ||| | |||| ||||| |||||||| |||| ||| || || | |||||||||||||| ||| | || ||||||||||||||||||| || ||| |
|
|
T |
30772292 |
agtttttatggcagccctc---tcaacaacaataaacaagagaaggtgtgatgatctgaaacacacaacaaagggttagcggcggctgatttgattcttc |
30772196 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||| |
|
|
T |
30772195 |
ctcaaccggtacctttatgcctcaagttctctt |
30772163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32094207 - 32094340
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |
|
|
T |
32094207 |
tagcggaagcaaacaaaacattgaacatgattatgataggatctacgacatgtttgatttatcaaggatattaagaatta-ggtattaggaatacctgaa |
32094305 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacga |
135 |
Q |
|
|
||||||||||| ||| |||||||| ||||||||| |
|
|
T |
32094306 |
taaagctttcatagcagccctctcaacaacaacga |
32094340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 24054447 - 24054336
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattaggg-tattaggaatacctgg |
99 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
T |
24054447 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaatttgggatattaggaatacctgg |
24054348 |
T |
|
Q |
100 |
ataaagctttca |
111 |
Q |
|
|
|||||||||||| |
|
|
T |
24054347 |
ataaagctttca |
24054336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 32097165 - 32097300
Alignment:
Q |
97 |
tggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggttt |
196 |
Q |
|
|
||||||||||||||| ||| |||| | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
32097165 |
tggataaagctttcatagcagccctttaatcaacaacgataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttagttc |
32097264 |
T |
|
Q |
197 |
ttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |
|
|
T |
32097265 |
ttcctcaaccggtacctttatgcctcaagttctctt |
32097300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 30384425 - 30384664
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
T |
30384425 |
tagcggaagcaaacaaaacattgaacacgattatgatcggatcta-gacatgtctgatttatcaaggatattaagaataagggtattaagaatacctgga |
30384523 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgat---aaccaaagagaggagatg-----atctgaaacagacaatagag-ttagcggcggctgattt |
191 |
Q |
|
|
| |||||||| | || | ||||| || ||||||| || ||| ||||||||||| |||||||||| |||| | || ||||||||| ||||||| |
|
|
T |
30384524 |
tgaagctttcgtgacaactctctcgccatcaacgatctaaaacaaggagaggagatgatctaatctgaaacacacaacatagcttagcggcgactgattt |
30384623 |
T |
|
Q |
192 |
ggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||| ||||||||||||||| ||||| |||| ||||||||| |
|
|
T |
30384624 |
ggttcttcctcaaccggtacctttatacctcgagttctctt |
30384664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 32094364 - 32094499
Alignment:
Q |
97 |
tggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggttt |
196 |
Q |
|
|
||||||||| ||||| ||| |||| | ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
32094364 |
tggataaaggtttcatagcagccctttaatcaacaacaataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctaatttggttc |
32094463 |
T |
|
Q |
197 |
ttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |
|
|
T |
32094464 |
ttcctcaaccggtacctttatgcctcaagttctctt |
32094499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32097008 - 32097138
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||| | |
|
|
T |
32097008 |
tagcggaagcaaacaaaacattgaacatgattatgataggatctacgacatgtttgatttatcaaggatattaagaatta-ggtattaggattacctgaa |
32097106 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaa |
132 |
Q |
|
|
||||||||||| ||| ||||||| |||||| |
|
|
T |
32097107 |
taaagctttcatagcagtcctctcaacaacaa |
32097138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 19059815 - 19060049
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctg--gata |
102 |
Q |
|
|
|||||||||||||| ||| ||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
T |
19059815 |
ggaagcaaacaaaatattaaacatgaatataaacggatctacgacatgtttgatttatcaaggatattaagaattagggtattagaaatacctggagatg |
19059914 |
T |
|
Q |
103 |
aagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga---------caatagagttagcggcggctgatttgg |
193 |
Q |
|
|
||||||| |||| ||||||| |||||||||| |||||||| || |||||||||||| | ||| | |||||||||||||||||||| |
|
|
T |
19059915 |
aagctttggtggcagccctctcgacaacaacgat----aaagagagaaggtgatctgaaacaaacatccacatcaacacggttagcggcggctgatttgg |
19060010 |
T |
|
Q |
194 |
tttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|| ||||||||| ||||| |||||||||||||||||||| |
|
|
T |
19060011 |
ttcttcctcaactggtacttttatgcctcaagttctctt |
19060049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 19066154 - 19066390
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctg-- |
98 |
Q |
|
|
|||||||||||||||||||||| | ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | |
|
|
T |
19066154 |
tagcggaagcaaacaaaacattaagcatgaatatgaacggatctacgacatgtttgatttatcaaggatattaagaattatggtattaggaataccagga |
19066253 |
T |
|
Q |
99 |
gataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga-------caatagagttagcggcggctgattt |
191 |
Q |
|
|
||| ||||||| |||| | ||||| |||||||||| |||||||| | |||||||||||| | ||| | ||||||||| |||||||| |
|
|
T |
19066254 |
gatgaagctttggtggcagctctctcgacaacaacgat----aaagagagaaagtgatctgaaacaaacccacatcaacacggttagcggcagctgattt |
19066349 |
T |
|
Q |
192 |
ggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
| || ||||||||||||||| |||||||||||||||||||| |
|
|
T |
19066350 |
gattcttcctcaaccggtacctttatgcctcaagttctctt |
19066390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16215221 - 16215309
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattag |
89 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||| |
|
|
T |
16215221 |
tagcggaagcaaacaaaacatttaacatgattatgattggatctacgaaatgtttgatttatcaaggatattaaaaattagggtattag |
16215309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 14610141 - 14610050
Alignment:
Q |
141 |
aaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||||| |||| || |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |
|
|
T |
14610141 |
aaagagaggagatgatctgaaacaaacaaaagggttagcggcggctgatttggttcttcctcaaccggtacttttatgcctaaagttctctt |
14610050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14610261 - 14610184
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaat |
78 |
Q |
|
|
||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
14610261 |
tagcggaagcaaataaaccattgaacatgattatgatcggatttacgacatgtttgatttatcaaggatattaagaat |
14610184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 28542336 - 28542269
Alignment:
Q |
15 |
aaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagg |
82 |
Q |
|
|
||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
28542336 |
aaaacattgaacatgattatgatcgaaactacgacatgtttgatttatcaaggatattaagaattagg |
28542269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 8706532 - 8706672
Alignment:
Q |
64 |
aaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaac |
163 |
Q |
|
|
||||||||||||||||||||||||||||||||||| || | ||||||| | || || ||||| || |||| || ||||||||||||||||||||||| |
|
|
T |
8706532 |
aaggatattaagaattagggtattaggaatacctgaattatgctttcatgacaaccatctcaacagcaac----acgaaagagaggagatgatctgaaac |
8706627 |
T |
|
Q |
164 |
aga-caatagagttagcggcggctgatttggtttttcctcaaccg |
207 |
Q |
|
|
| | | | ||||||| |||||||||||||| ||||||||||| |
|
|
T |
8706628 |
aaattgaaggggttagcgacggctgatttggttcttcctcaaccg |
8706672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 37896365 - 37896423
Alignment:
Q |
21 |
ttgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaatt |
79 |
Q |
|
|
|||||||||||||||||||||||||||||||| || |||||||||| ||||||| |||| |
|
|
T |
37896365 |
ttgaacatgattatgatcggatctacgacatgattgatttatcaagaatattaataatt |
37896423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 26509958 - 26509871
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaata |
94 |
Q |
|
|
|||||||||||||||||||||||| |||||||| | ||||||||| ||| ||| ||||| |||||||||||||| ||||||||||||| |
|
|
T |
26509958 |
ggaagcaaacaaaacattgaacataattatgatataaactacgacatatttgattcatcaa-gatattaagaatta-ggtattaggaata |
26509871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 26316843 - 26316922
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggt |
84 |
Q |
|
|
||||||||| |||||||||||||| | |||||| ||||||| ||||||||| ||||||| | | |||||| ||||||||| |
|
|
T |
26316843 |
ggaagcaaaaaaaacattgaacattaatatgattggatctaggacatgtttgatttatctacggtattaataattagggt |
26316922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 5542207 - 5542438
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
T |
5542207 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctaga |
5542306 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
5542307 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagaggggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
5542406 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
5542407 |
tcaaccggtacctttatgcctcaagttctctt |
5542438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 32891001 - 32890770
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
32891001 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttaccaaggatattaagaattagggtattaggaatacctgga |
32890902 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
32890901 |
taaagctttcaaggcaaccctctcatcaacaacaataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
32890802 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
32890801 |
tcaaccggtacctttatgcctcaagttctctt |
32890770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 32897125 - 32896894
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
32897125 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttaccaaggatattaagaattagggtattaggaatacctgga |
32897026 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
32897025 |
taaagctttcaagacaaccctctcatcaacaacaataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
32896926 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
32896925 |
tcaaccggtacctttatgcctcaagttctctt |
32896894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 14418053 - 14417822
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
14418053 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
14417954 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||| ||| |||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |
|
|
T |
14417953 |
taaagctttcatagcagccctctaatcaacgacgataaccaaagagagaagatgatctgaaacacacaatagttttagcggcggctgatttggttcttcc |
14417854 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
14417853 |
tcaaccggtacgtttatgcctcaagttctctt |
14417822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 42993051 - 42993281
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |
|
|
T |
42993051 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggaataccttga |
42993149 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
42993150 |
taaagcttttgtagccaccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
42993249 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
42993250 |
tcaaccggtacctttatgcctcaagttctctt |
42993281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 9935391 - 9935160
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
9935391 |
tagcggaagcaaacaaaacattgaatatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
9935292 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| |||| |
|
|
T |
9935291 |
taaatctttcatagcagccctctaatcaacaacgttaaccaaagataggagatgatctgaaacacacaatagatttagcggcggctgatttggttcttcc |
9935192 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||| |||||| |||||||||||||||||||| |
|
|
T |
9935191 |
tcaatcggtacctttatgcctcaagttctctt |
9935160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 5 - 230
Target Start/End: Complemental strand, 36819079 - 36818855
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaa |
104 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
36819079 |
ggaagcaaacaaaacattgaatatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggaatacctggataaa |
36818981 |
T |
|
Q |
105 |
gctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaa |
204 |
Q |
|
|
||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
T |
36818980 |
gcttttgtagccgccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaa |
36818881 |
T |
|
Q |
205 |
ccggtacatttatgcctcaagttctc |
230 |
Q |
|
|
||||||| |||||||||||||||||| |
|
|
T |
36818880 |
ccggtacctttatgcctcaagttctc |
36818855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 10700127 - 10699916
Alignment:
Q |
15 |
aaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaagg |
114 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||| | |
|
|
T |
10700127 |
aaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggaatatctggataaaacttttgtag |
10700029 |
T |
|
Q |
115 |
catccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatt |
214 |
Q |
|
|
|| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || |
|
|
T |
10700028 |
cagccctctcatcaacaacgataaccaaagagaggaaatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt |
10699929 |
T |
|
Q |
215 |
tatgcctcaagtt |
227 |
Q |
|
|
||||||||||||| |
|
|
T |
10699928 |
tatgcctcaagtt |
10699916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 10705955 - 10705719
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgat------cggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaata |
94 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |
|
|
T |
10705955 |
tagcgtaagcaaacaaaacattgaacatgattatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggatta |
10705857 |
T |
|
Q |
95 |
cctggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggt |
194 |
Q |
|
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
T |
10705856 |
cctggataaagcttttgtagcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttgat |
10705757 |
T |
|
Q |
195 |
ttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
| ||||||||||||||| |||||| || |||||||||| |
|
|
T |
10705756 |
tcttcctcaaccggtacctttatggcttaagttctctt |
10705719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 22219778 - 22220005
Alignment:
Q |
15 |
aaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga-taaagctttcaag |
113 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| | | |
|
|
T |
22219778 |
aaaactttgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctggattgaagctttgatg |
22219877 |
T |
|
Q |
114 |
gcatccctct----------catcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctca |
203 |
Q |
|
|
||| |||||| || |||||||||||| |||||| | | |||||||||||| |||||| |||||| |||||||||||||||| ||||||| |
|
|
T |
22219878 |
gcagccctctcaacaacaaccaacaacaacgataaacaaaga-aaaaattgatctgaaacaaacaataaagttagtggcggctgatttggttcttcctca |
22219976 |
T |
|
Q |
204 |
accggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||| |||||||||||||||||||| |
|
|
T |
22219977 |
accggtacctttatgcctcaagttctctt |
22220005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 7771344 - 7771202
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
7771344 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttaccaaggatattaagaattagggtattaagaatacctgga |
7771245 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaag |
144 |
Q |
|
|
| ||||||| ||| ||||||||||||||||||||||||||| |
|
|
T |
7771244 |
t-aagcttttgtagcaaccctctcatcaacaacgataaccaaag |
7771202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 39735599 - 39735826
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||| ||| |||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||| |
|
|
T |
39735599 |
tagcggaagtaaataaaatattgaacatgattatgattgtatctacgacatgtttgatttatcaaagatattaagaactagggtataaggaatacctgga |
39735698 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaa-tagagttagcggcggctgatttggtttttc |
199 |
Q |
|
|
|||| ||||| |||| |||||||| |||||||| | |||||||| || |||||||||||| |||| || ||||||||||||||||||| || ||| |
|
|
T |
39735699 |
taaa-atttcatggcaaccctctcaacaacaacggt----aaagagagaaggtgatctgaaacaaacaacaagggttagcggcggctgatttgattcttc |
39735793 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|| ||| |||||||||||||||||||| ||||| |
|
|
T |
39735794 |
cttaactggtacatttatgcctcaagtactctt |
39735826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 39727370 - 39727586
Alignment:
Q |
4 |
cggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataa |
103 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||| || |
|
|
T |
39727370 |
cggaagcaaacaaaacattgaacatgattatgatc---------acatgtttgatttatcaaggatattaagaattagggtataagaaatacctggaaaa |
39727460 |
T |
|
Q |
104 |
agctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagaca-atagagttagcggcggctgatttggtttttcctc |
202 |
Q |
|
|
| ||||| |||| |||||||| |||||||| | |||||||| || |||||||||||| ||| || ||||||||| |||||||||||| |||||| |
|
|
T |
39727461 |
aactttcttggcaaccctctcaacaacaacggt----aaagagagaaggtgatctgaaacaaacagcaagggttagcggctgctgatttggttcttcctc |
39727556 |
T |
|
Q |
203 |
aaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||| |||||||||||||| ||||| |
|
|
T |
39727557 |
aaccggtacctttatgcctcaagtactctt |
39727586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14799463 - 14799564
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
14799463 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaa-gatattaagaattagggtattaggaatacctgga |
14799561 |
T |
|
Q |
101 |
taa |
103 |
Q |
|
|
||| |
|
|
T |
14799562 |
taa |
14799564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1882799 - 1882939
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctac-gacatgttttatttatcaaggatattaagaattagggtattaggaatacctg- |
98 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
1882799 |
tagcggaagcaaacaaaacattgaacatgaatatgaacggatctaatgacatgtttgatttatcaaggatgttaagaattagggtattaggaatacctgg |
1882898 |
T |
|
Q |
99 |
-gataaagctttcaaggcatccctctcatcaacaacgataa |
138 |
Q |
|
|
||| ||||||||| |||| |||||||| |||||||||||| |
|
|
T |
1882899 |
agatgaagctttcatggcagccctctcaacaacaacgataa |
1882939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 1171414 - 1171249
Alignment:
Q |
44 |
tacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgataaccaaa |
143 |
Q |
|
|
|||||||| ||| |||||||||| ||| |||||||||| |||||||||||||||| ||||||||| | |||| | |||||| || |||| ||| || | |
|
|
T |
1171414 |
tacgacatatttgatttatcaag-ataacaagaattagg-tattaggaatacctggttaaagcttttatggcagctctctcaacagcaacagtaaacaga |
1171317 |
T |
|
Q |
144 |
gagaggagatgatctgaaacagacaatagag-ttagcggcggctgatttggtttttcctcaaccggta |
210 |
Q |
|
|
|||| || |||||||||||| |||| | | ||||||||||||||||||||| |||||||||||||| |
|
|
T |
1171316 |
gagatgatgtgatctgaaacaaacaacaacggttagcggcggctgatttggttcttcctcaaccggta |
1171249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 42033740 - 42033682
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
42033740 |
gttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctctt |
42033682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 1883039 - 1883097
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||| |||||||| |||||||||| |||| |||||| ||||||||||||| |
|
|
T |
1883039 |
gttagcggcggctaatttggttcttcctcaaccagtacctttatgtctcaagttctctt |
1883097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24250215 - 24250171
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatcta |
45 |
Q |
|
|
|||||||| ||||||||| ||||||||| |||||||||||||||| |
|
|
T |
24250215 |
tagcggaaacaaacaaaatattgaacattattatgatcggatcta |
24250171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 25387551 - 25387782
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
25387551 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
25387650 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
25387651 |
taaagctttaaaaacagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
25387750 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
25387751 |
tcaaccggtacctttatgcctcaagttctctt |
25387782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 34740098 - 34739867
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |
|
|
T |
34740098 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgaa |
34739999 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
34739998 |
taaacctttcaaggcagccctctcatcaacaacgataaccaaagagagaaaatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
34739899 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
34739898 |
tcaaccggtacctttatgcctcaagttctctt |
34739867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 25381582 - 25381813
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
25381582 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgaaatgtttgatttaccaaggatattaagaattagggtattaggaatacctgga |
25381681 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
25381682 |
taaagcttttgtaacagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
25381781 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
25381782 |
tcaaccggtacctttatgcctcaagttctctt |
25381813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 50306301 - 50306093
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
T |
50306301 |
tagcggaagcaaacaaaacattgaacatgattataatcggatctacgacatgtttgatttatcaag-atattaagaattaggctattaggaatacctgga |
50306203 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
50306202 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
50306103 |
T |
|
Q |
201 |
tcaaccggta |
210 |
Q |
|
|
|||||||||| |
|
|
T |
50306102 |
tcaaccggta |
50306093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31051656 - 31051426
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
T |
31051656 |
tagcggaagcaaacaaaacattgaacatgattatgattggatctacgacatgtttgatttatcaag-atattaagaattagggtattaagaatacctgga |
31051558 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
31051557 |
taaaacttttgtagcaaccctttcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
31051458 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
| ||||||||| |||||||||||||||||||| |
|
|
T |
31051457 |
ttaaccggtacctttatgcctcaagttctctt |
31051426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31058156 - 31057926
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
T |
31058156 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaagaatacttgga |
31058058 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||| |
|
|
T |
31058057 |
taaaacttttgtagcaaccctctcatcaacaacgataaccaaagagaggagatgatctaaaacacacaatagagttagcggcgactgatttggttcttcc |
31057958 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
| ||||||||| |||||||||||||||||||| |
|
|
T |
31057957 |
ttaaccggtacctttatgcctcaagttctctt |
31057926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 8092893 - 8093124
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
T |
8092893 |
tagcagaagcaaataaaacattgaacatgattatgatcggatctatgacatgtttgatttatcaaggatattaagaatttgggtatgaggaatacctgga |
8092992 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaa-tagagttagcggcggctgatttggtttttc |
199 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||| ||| |
|
|
T |
8092993 |
taaagcttttgtagcagtcctctcatcaacaacgataaccaaagagatgagatgatctgaaacaaacaactag-gttagcggcggctgatttggttcttc |
8093091 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||| |
|
|
T |
8093092 |
ctcaaccggtacctttatgcctcaagttctctt |
8093124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 44410122 - 44409882
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| |
|
|
T |
44410122 |
tagcggaagcaaacaaaacattgaacataaatatgaacggatctacgacatgtttgatttatcaaggatatcaagaatta--gtattaggaatacctgga |
44410025 |
T |
|
Q |
101 |
taaagctttcaaggcatccctct---catcaacaacgataaccaaagagaggagatgatctgaaacagaca--------at--agagttagcggcggctg |
187 |
Q |
|
|
||||||||| | |||| |||||| || |||||||||||| ||||||||| |||||||||||| ||| || | |||||||||||||| |
|
|
T |
44410024 |
taaagcttttatggcagccctctcaacaacaacaacgataa--ggagagaggaggtgatctgaaacaaacatcaacttcatcaacggttagcggcggctg |
44409927 |
T |
|
Q |
188 |
atttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||| |||||||||| |||| |||||||||||||||||||| |
|
|
T |
44409926 |
atttggttcttcctcaaccagtacctttatgcctcaagttctctt |
44409882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1078336 - 1078228
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| |
|
|
T |
1078336 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttaccaagaatattaagaattagggtattaagaatacctgga |
1078237 |
T |
|
Q |
101 |
taaagcttt |
109 |
Q |
|
|
||||||||| |
|
|
T |
1078236 |
taaagcttt |
1078228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 24926801 - 24927039
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctg-- |
98 |
Q |
|
|
|||||||||||| ||||||||||||||| | ||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| |
|
|
T |
24926801 |
tagcggaagcaaccaaaacattgaacattaatatgaacggatctacgacatgtttgatttatcaagaatattaagaattaacgtattaggaatacctgaa |
24926900 |
T |
|
Q |
99 |
gataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga---------caatagagttagcggcggctgat |
189 |
Q |
|
|
||| ||||||| |||| | ||||| |||||||||| ||||||||||| |||||||||||| | ||| | ||||| ||| |||||| |
|
|
T |
24926901 |
gatgaagctttggtggcagcactctcgacaacaacgat----aaagagaggaggtgatctgaaacaaacatcaacatcaacacggttagtggcagctgat |
24926996 |
T |
|
Q |
190 |
ttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| ||||||||||||||| | |||||||||||||||||| |
|
|
T |
24926997 |
ttggttcttcctcaaccggtacctatatgcctcaagttctctt |
24927039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 27955273 - 27955042
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| || || || ||||||||||| ||||||| |
|
|
T |
27955273 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacaacatgtttgat-----aaggatataaataa-taaggtattaggaagacctgga |
27955180 |
T |
|
Q |
101 |
taaagctttcaaggca--tccctctcatcaacaacgataaccaaagagagga---gatgatctgaaacagacaataga--gttagcggcggctgatttgg |
193 |
Q |
|
|
||||||||||| | | || |||||| |||||||||||| |||||||||| |||||||||||||| |||| | | |||| || || ||||||| | |
|
|
T |
27955179 |
taaagctttcatgatagctctctctcaacaacaacgataaagaaagagaggatgtgatgatctgaaacacacaacaaaatgttaacgacgactgatttag |
27955080 |
T |
|
Q |
194 |
tttttcctcaaccggtacatttatgcctcaagttctct |
231 |
Q |
|
|
|| ||||||||||||||| |||||| || ||||||||| |
|
|
T |
27955079 |
ttattcctcaaccggtacctttatgtcttaagttctct |
27955042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 12183635 - 12183740
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaa |
104 |
Q |
|
|
|||||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||||| ||||| |
|
|
T |
12183635 |
ggaagcaaacaaaatattgaacataattatgattggatctacgacatgtttgatttatcaa-gatattaagaatttgagtattaggaatacctgaataaa |
12183733 |
T |
|
Q |
105 |
gctttca |
111 |
Q |
|
|
||||||| |
|
|
T |
12183734 |
gctttca |
12183740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 24963749 - 24963987
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctg-- |
98 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||| ||| ||||||||| |||||||||||||||| |
|
|
T |
24963749 |
tagcggaagcaaacaaaacattgaacatgaatatgaacggatctacgccatgtttgatttatcaagaatagtaagaattaaagtattaggaatacctgaa |
24963848 |
T |
|
Q |
99 |
gataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga---------caatagagttagcggcggctgat |
189 |
Q |
|
|
||| ||||||| || | ||||||| |||||||||| ||||||||||| |||||||||||| | ||| | ||||| || ||||| |
|
|
T |
24963849 |
gatgaagctttggtggtagccctctcgacaacaacgat----aaagagaggaggtgatctgaaacaaacatcaacatcaacacggttagtggaaactgat |
24963944 |
T |
|
Q |
190 |
ttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||||||||| ||||||||||||||||||| ||||| |
|
|
T |
24963945 |
ttggttcttcctcaaccagtacatttatgcctcaagtcctctt |
24963987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 1078209 - 1078126
Alignment:
Q |
149 |
gagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
1078209 |
gagatgatctgaaacacacaatagagttagcggccgctgatttggttcttcctcaaccggtacctttatgcctcaagttctctt |
1078126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 38152023 - 38152242
Alignment:
Q |
2 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggat |
101 |
Q |
|
|
||||||||||||||||| |||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || |
|
|
T |
38152023 |
agcggaagcaaacaaaatattgaacatgatca------gatctacgacatgtttgatttatcaaacatattaagaattagggtattaggaatacctgaat |
38152116 |
T |
|
Q |
102 |
aaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaataga-gttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|| |||| | | || ||||||| |||||| ||| |||| ||||||||||| | |||| | | ||||||||| ||| |||||||| ||| |
|
|
T |
38152117 |
gaaactttgatgacaatcctctcaacaacaatgatg------gagaaaccatgatctgaaatacacaacatacgttagcggcagctaatttggttcttct |
38152210 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| ||||||| ||||||| |||| |
|
|
T |
38152211 |
tcaaccggtacctttatgcttcaagttttctt |
38152242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 12183816 - 12183867
Alignment:
Q |
181 |
gcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||| ||||||||||| || |||||||| ||| |||||||||||||||||||| |
|
|
T |
12183816 |
gcgactgatttggttatttctcaaccgctacctttatgcctcaagttctctt |
12183867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 13456212 - 13455981
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
13456212 |
tagcggaagcaaacaaaacattgaacctgattatgatcggatctacgacatgtttgatttatcaagggtattaagaattagggtattaggaatacctgga |
13456113 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
T |
13456112 |
taaagctttcaaggcagccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcc |
13456013 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
13456012 |
tcaaccggtacctttatgcctcaagttctctt |
13455981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 13462153 - 13461922
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
13462153 |
tagcggaagcaaacaaaacattgaacctgattatgatcggatctacgacatgtttgatttatcaagggtattaagaattagggtattaggaatacctgga |
13462054 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
T |
13462053 |
taaagctttcaaggcagccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcc |
13461954 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
13461953 |
tcaaccggtacctttatgcctcaagttctctt |
13461922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 36750527 - 36750296
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
36750527 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
36750428 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
36750427 |
taaaactttcatagcagccctctaatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
36750328 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| |||||||||||||||||||| |
|
|
T |
36750327 |
tcaaccggtatctttatgcctcaagttctctt |
36750296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 28682992 - 28683223
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
28682992 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggttattaagaattagggtattaggaatacctgga |
28683091 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| | ||||||||||||||| |||| |
|
|
T |
28683092 |
taaagctttcaagacaaccctctcatcaacaacgataaccaaggagagtggatgatctgaaacacacaatagagttaacagcggctgatttggttcttcc |
28683191 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
28683192 |
tcaaccggtacctttatgcctcaagttctctt |
28683223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 44716851 - 44717083
Alignment:
Q |
1 |
tagcggaagcaaac-aaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgg |
99 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
44716851 |
tagcggaagcaaaagaaaacattgaacatgattatgatcggatctacgacatgtttgatttaccaaggatattaagaattagggtattaggaatacctgg |
44716950 |
T |
|
Q |
100 |
ataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttc |
199 |
Q |
|
|
|||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
T |
44716951 |
ataaagcttttgtagcagctctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttc |
44717050 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||| |
|
|
T |
44717051 |
ctcaaccggtacctttatgcctcaagttctctt |
44717083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 13149733 - 13149962
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||| | |
|
|
T |
13149733 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaagaatacctg-a |
13149830 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
13149831 |
taaaacttttgtagcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
13149930 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
13149931 |
tcaaccggtacctttatgcctcaagttctctt |
13149962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31002489 - 31002258
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| | |
|
|
T |
31002489 |
tagcggaagcaaacaaaatattgaacatgattatgatcggatctacgacatgtttgatttatcaagaatatcaagaattagggtattaggaatacctgaa |
31002390 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||| |||| |
|
|
T |
31002389 |
taaagcttttgtagcagccctctcatcaacaacgataaccaaaaagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcc |
31002290 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
31002289 |
tcaaccggtacctttatgcctcaagttctctt |
31002258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31008467 - 31008236
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| | |
|
|
T |
31008467 |
tagcggaagcaaacaaaatattgaacatgattatgatcggatctacgacatgtttgatttatcaagaatatcaagaattagggtattaggaatacctgaa |
31008368 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||| |||| |
|
|
T |
31008367 |
taaagcttttgtagcagccctctcatcaacaacgataaccaaaaagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcc |
31008268 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
31008267 |
tcaaccggtacttttatgcctcaagttctctt |
31008236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 30965440 - 30965209
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| | |
|
|
T |
30965440 |
tagcggaagcaaacaaaatattgaacatgattatgatcggatctacgacatgtttgatttatcaattattttaagaattagggtattaggaatacctgta |
30965341 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |||||||| |||| |
|
|
T |
30965340 |
taaatcttttgtagcagccctctcatcaacaacgataaccaaagagatgagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcc |
30965241 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
30965240 |
tcaaccggtacctttatgcctcaagttctctt |
30965209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35090696 - 35090930
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||| |
|
|
T |
35090696 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaagaatattaacaattagtgtattaggaatacctgga |
35090795 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagac--------aatagagttagcggcggctgatttg |
192 |
Q |
|
|
||||||||||| |||| |||||||| || |||| |||| | ||||||| |||||||||||| || ||||| ||||||||||||||||||| |
|
|
T |
35090796 |
taaagctttcatggcagccctctcagcatcaacaataa--acagagagg---tgatctgaaacaaacaataaataaatagggttagcggcggctgatttg |
35090890 |
T |
|
Q |
193 |
gtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
35090891 |
gttcttcctcaaccggtacctttatgcctcaagttctctt |
35090930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35084723 - 35084957
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||| |
|
|
T |
35084723 |
tagcggaagcaaacaaaacattgaaaatgattatgatcggatctacgacatgtttgatttatcaagaatattaacaattagtgtattaggaatacctgga |
35084822 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagac--------aatagagttagcggcggctgatttg |
192 |
Q |
|
|
||||||||||| |||| |||||||| || |||| |||| | ||||||| |||||||||||| || ||||| ||||||||||||||||||| |
|
|
T |
35084823 |
taaagctttcatggcagccctctcagcatcaacaataa--acagagagg---tgatctgaaacaaacaataaataaatagggttagcggcggctgatttg |
35084917 |
T |
|
Q |
193 |
gtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
35084918 |
gttcttcctcaaccggtacctttatgcctcaagttctctt |
35084957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35438756 - 35438983
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || || ||| |||||||||||||||||||| | |
|
|
T |
35438756 |
tagcggaagcaaataaaacattgaacatgattatgatcggatctacgacatgtttgatt---------tactaggaaatagggtattaggaatacctgta |
35438846 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataacca----aagagaggagatgatctgaaacagaca-atagagttagcggcggctgatttggtt |
195 |
Q |
|
|
||||||||||| |||| || |||| ||||||| | ||| | ||||||||| |||||||||||| ||| | |||||||||||||||||||||| |
|
|
T |
35438847 |
taaagctttcatggcagccgtctcgacaacaacaacaacgataaggagagaggaggtgatctgaaacaaacatcaacggttagcggcggctgatttggtt |
35438946 |
T |
|
Q |
196 |
tttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |
|
|
T |
35438947 |
cttcctcaaccggtacctttatgcctcaagttctctt |
35438983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 11048600 - 11048829
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||| |||| |||| ||||||| || || ||||||||||||||||||||| | ||||||||| |||| |
|
|
T |
11048600 |
tagctgaagcaaacaaaacattgaacatgattatgattggatatacgtcatgtttgatgtaccaaggatattaagaattagggcactaggaatacttgga |
11048699 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga---caatagagttagcggcggctgatttggtttt |
197 |
Q |
|
|
||||||||| | | || ||||||| ||||||| || ||||||| || |||||||||||| | ||| | ||||| ||||| || |||||||| | |
|
|
T |
11048700 |
taaagcttttatgacagccctctcgacaacaacaat----caagagagaaggtgatctgaaacaaatatcaacacagtta-cggcgactaatttggttct |
11048794 |
T |
|
Q |
198 |
tcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||| ||||| |||||||||||||||||||| |
|
|
T |
11048795 |
tcctcaactggtacctttatgcctcaagttctctt |
11048829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 23343672 - 23343435
Alignment:
Q |
2 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctg--g |
99 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||||| || ||||||||||||||| || | |
|
|
T |
23343672 |
agcggaagcaaacaaaacattgaacatgaatatgaacgaatctacgacatgtttgatttatcaaggatattaagagttggggtattaggaatacatggag |
23343573 |
T |
|
Q |
100 |
ataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacaga---------caatagagttagcggcggctgatt |
190 |
Q |
|
|
|| || |||| |||| ||||||| ||||||| || ||| ||||||| |||||||||||| | ||| | |||||| |||||||||| |
|
|
T |
23343572 |
atgaaactttggtggcagccctctcgacaacaacaat----aaatagaggaggtgatctgaaacaaacatcaacatcaacacggttagcagcggctgatt |
23343477 |
T |
|
Q |
191 |
tggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||| ||||||||||| ||| |||||||||||||||||||| |
|
|
T |
23343476 |
tggttcttcctcaaccgatacctttatgcctcaagttctctt |
23343435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 29833317 - 29833188
Alignment:
Q |
4 |
cggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataa |
103 |
Q |
|
|
||||| |||| |||| ||||||||| |||||||||||||| || |||||||| ||||||||| |||| || ||||| ||||||| |||||||||||| | |
|
|
T |
29833317 |
cggaaacaaataaaatattgaacataattatgatcggatcgacaacatgtttgatttatcaa-gataacaataatta-ggtattaagaatacctggatga |
29833220 |
T |
|
Q |
104 |
agctttcaaggcatccctctcatcaacaacgat |
136 |
Q |
|
|
|| ||| | | || |||||||| |||||||||| |
|
|
T |
29833219 |
ag-tttgatgacaaccctctcaacaacaacgat |
29833188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 19879536 - 19879480
Alignment:
Q |
176 |
tagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||||||| || ||| |||| |||||| |||||||||||||||||||| |
|
|
T |
19879536 |
tagcggcggctgatttgattcttcttcaatcggtacctttatgcctcaagttctctt |
19879480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 29034759 - 29034702
Alignment:
Q |
175 |
ttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| |||||||||| || ||||||||| ||||| |||||| ||||||||||||| |
|
|
T |
29034759 |
ttagcggtggctgatttgattcttcctcaactggtacctttatgtctcaagttctctt |
29034702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 28765610 - 28765462
Alignment:
Q |
84 |
tattaggaatacctggataaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcg |
183 |
Q |
|
|
|||||||||||||||||| | | ||| | |||| | || ||| |||||| ||||| |||| || | ||||||||||||||| ||| | ||||| || | |
|
|
T |
28765610 |
tattaggaatacctggatgatgttttgatggcagctctatcaacaacaatgataaacaaatagtgaagatgatctgaaacaaacaccaaggttagaggag |
28765511 |
T |
|
Q |
184 |
gctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| |||||||| ||||| || ||||||||| ||||||| |
|
|
T |
28765510 |
attgatttggttcttcctcaataggtaccttgatgcctcaaattctctt |
28765462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 29833142 - 29833083
Alignment:
Q |
174 |
gttagcggcggctga-tttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||||| | ||||||| ||||||||||| ||||||||| | |||||||||||| |
|
|
T |
29833142 |
gttagcggcggctaaatttggttcttcctcaaccgatacatttatccttcaagttctctt |
29833083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 31651703 - 31651664
Alignment:
Q |
15 |
aaaacattgaacatgattatgatcggatctacgacatgtt |
54 |
Q |
|
|
|||||||||||||||||||||||||||| || |||||||| |
|
|
T |
31651703 |
aaaacattgaacatgattatgatcggatttatgacatgtt |
31651664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0208
Description:
Target: scaffold0208; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 6635 - 6404
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
6635 |
tagcggaagcaaacaaaacattgaacatgattatgactgaatctacaacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
6536 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
6535 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
6436 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
6435 |
tcaaccggtacctttatgcctcaagttctctt |
6404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 12508 - 12277
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
T |
12508 |
tagcggaagcaaataaaacattgaacataattatgatcgaatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatatctgga |
12409 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
12408 |
taaagctttcaaggcagtcctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
12309 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
12308 |
tcaaccggtacctttatgcctcaagttctctt |
12277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 30)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10739386 - 10739617
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10739386 |
tagcagaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
10739485 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
10739486 |
taaacctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcggcggctgatttggttcttcc |
10739585 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| ||| |||||||||||| ||||||| |
|
|
T |
10739586 |
tcaaccgatacctttatgcctcaaattctctt |
10739617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10953155 - 10953386
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10953155 |
tagcagaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
10953254 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
10953255 |
taaacctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcggcggctgatttggttcttcc |
10953354 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| ||| |||||||||||| ||||||| |
|
|
T |
10953355 |
tcaaccgatacctttatgcctcaaattctctt |
10953386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 24288099 - 24287868
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
24288099 |
tagcggaagcaaacaaaacattgaacatgattatgatcgtatctacgacatgtttgatttatcaaggttattaagaattagggtattaggaatacctgga |
24288000 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
24287999 |
taaaactttcatagcagccctctaatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
24287900 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
24287899 |
tcaaccggtacctttatgcctcaagttctctt |
24287868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 33458314 - 33458545
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33458314 |
tagcggaagcaaacaaaatattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
33458413 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| || | |
|
|
T |
33458414 |
taaagctttcttagcagccctctcatcaacaacgataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttctttc |
33458513 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| ||| |||||||||||||||||||| |
|
|
T |
33458514 |
tcaaccgatacctttatgcctcaagttctctt |
33458545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 6257253 - 6257483
Alignment:
Q |
2 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggat |
101 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
T |
6257253 |
agcggaagcaaacaaaacattgaacatgattatgatcggatctacaacatgtttgatttatcaaggatgttaagaattaggatattaggaatacctggat |
6257352 |
T |
|
Q |
102 |
aaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcct |
201 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
T |
6257353 |
aaagctttcgtagcagccctctcatcaacaacgataaccaaagtgaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcct |
6257452 |
T |
|
Q |
202 |
caaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| |||||||||||||||||||| |
|
|
T |
6257453 |
caaccggtacctttatgcctcaagttctctt |
6257483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10733293 - 10733499
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10733293 |
tagcggaagcaaataaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
10733392 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||| |
|
|
T |
10733393 |
taaacctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcc |
10733492 |
T |
|
Q |
201 |
tcaaccg |
207 |
Q |
|
|
||||||| |
|
|
T |
10733493 |
tcaaccg |
10733499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10947062 - 10947268
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10947062 |
tagcggaagcaaataaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
10947161 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||| |
|
|
T |
10947162 |
taaacctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcc |
10947261 |
T |
|
Q |
201 |
tcaaccg |
207 |
Q |
|
|
||||||| |
|
|
T |
10947262 |
tcaaccg |
10947268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 48161071 - 48160841
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | |
|
|
T |
48161071 |
tagcggaagcaaacaaaacattgaacataattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggaatacctgaa |
48160973 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||| |
|
|
T |
48160972 |
taaagcttttgtaacagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcc |
48160873 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| |||||||||||||||||||| |
|
|
T |
48160872 |
tcaaccagtacctttatgcctcaagttctctt |
48160841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 48167290 - 48167060
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | |
|
|
T |
48167290 |
tagcggaagcaaacaaaacattgaacataattatgatcggatctacgacatgtttgatttatcaag-atattaagaattagggtattaggaatacctgaa |
48167192 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||| |
|
|
T |
48167191 |
taaagcttttgtaacagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcc |
48167092 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| |||||||||||||||||||| |
|
|
T |
48167091 |
tcaaccagtacctttatgcctcaagttctctt |
48167060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 33461444 - 33461667
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaa |
104 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
T |
33461444 |
ggaagcaaacaaaacattgaacatgattatggtcggatttacgacatgtttgatttatcaag-atattaagaattagggtattaggaatatctggataaa |
33461542 |
T |
|
Q |
105 |
gctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaa |
204 |
Q |
|
|
||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |
|
|
T |
33461543 |
gcttttgcagcagccctctcatcaacaacgataatcaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttgattcttcctcaa |
33461642 |
T |
|
Q |
205 |
ccggtacatttatgcctcaagttct |
229 |
Q |
|
|
||||||| ||||||||||||||||| |
|
|
T |
33461643 |
ccggtacctttatgcctcaagttct |
33461667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 44831659 - 44831897
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||| || |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| || |
|
|
T |
44831659 |
tagcggaagcaaattaatcattgaacatgaatatgatcgaatctacgacatgtttaatttatcaaggatattaagaactagggtattaagaatacctaga |
44831758 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagag-----gagatgatctgaaacagacaa--tagagttagcggcggctgatttgg |
193 |
Q |
|
|
| ||||||| | || |||||||| |||||||||||| || |||||| | |||||||||||||| |||| ||| ||||||| |||||||| ||| |
|
|
T |
44831759 |
tgaagctttgataacaaccctctcaacaacaacgataaacagagagagagaaggtgatgatctgaaacacacaaaatagggttagcgacggctgatgtgg |
44831858 |
T |
|
Q |
194 |
tttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|| |||||||||||||| |||||||||||||||||||| |
|
|
T |
44831859 |
ttcttcctcaaccggtatttttatgcctcaagttctctt |
44831897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 10733504 - 10733630
Alignment:
Q |
106 |
ctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaac |
205 |
Q |
|
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
T |
10733504 |
ctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcctcaac |
10733603 |
T |
|
Q |
206 |
cggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|| ||| |||||||||||| ||||||| |
|
|
T |
10733604 |
cgatacctttatgcctcaaattctctt |
10733630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 10947273 - 10947399
Alignment:
Q |
106 |
ctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctcaac |
205 |
Q |
|
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
T |
10947273 |
ctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcctcaac |
10947372 |
T |
|
Q |
206 |
cggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|| ||| |||||||||||| ||||||| |
|
|
T |
10947373 |
cgatacctttatgcctcaaattctctt |
10947399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 50168705 - 50168476
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||| ||||| ||||| |||||||||||| |
|
|
T |
50168705 |
tagcggaagcaaacaaaacattgaacatgattatgatcgaatatacgacatgtttgatttatcaagaatattaacaatta-ggtataaggaatacctggt |
50168607 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaa-tagagttagcggcggctgatttggtttttc |
199 |
Q |
|
|
| | ||||||| |||| || |||| ||||||| | || || |||||||| |||||||||||| |||| || |||||||||| |||||| ||| ||| |
|
|
T |
50168606 |
tgaggctttcatggca-gccactcaacaacaacaacaatcagagagaggatgtgatctgaaacaaacaacaaggattagcggcggttgatttagttcttc |
50168508 |
T |
|
Q |
200 |
ctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||| |||||| |||||||||||||||||||| |
|
|
T |
50168507 |
ctcaa-cggtacctttatgcctcaagttctctt |
50168476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 49976699 - 49976468
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| || |
|
|
T |
49976699 |
tagcgaaagcaaacaaaacattgaatatgattatgatcggatctacgacatgtttgatttatcaagga---taataattagagtattaggaatacc-aga |
49976604 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagagga---gatgatctgaaacagacaa---tagagttagcggcggctgatttggt |
194 |
Q |
|
|
| ||||||| | || ||||||| |||||||||||| ||||||||||| |||||||| ||||| |||| || ||||||||||||||||||||| |
|
|
T |
49976603 |
tgaagctttgataacactcctctcaacaacaacgataaacaaagagaggaggtgatgatctcaaacacacaaaataagggttagcggcggctgatttggt |
49976504 |
T |
|
Q |
195 |
ttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
| |||||||| |||||| |||||||||||||||||||| |
|
|
T |
49976503 |
tcttcctcaa-cggtac-tttatgcctcaagttctctt |
49976468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 4632482 - 4632263
Alignment:
Q |
22 |
tgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatccct |
121 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||| ||||||||||||||| | || |||| |
|
|
T |
4632482 |
tgaacatgattatgatcggatctacgacatgtttgatttatcaa-gatattaagaattagggtatcagaaatacttggataaagctttcatgacaaccct |
4632384 |
T |
|
Q |
122 |
ctcatcaacaacgataaccaaa---gagaggagatga-------tctgaaacagacaatagagttagcggcggctgatttggtttttcctcaaccggtac |
211 |
Q |
|
|
||| ||||||| |||| |||| |||| | ||||| ||||||||| | || | |||||||||| ||||||||||| |||||||||||||| |
|
|
T |
4632383 |
ttcaacaacaaccataaacaaataggagatgtgatgatctgaattctgaaacacaaaacatagttagcggcttctgatttggttcttcctcaaccggtat |
4632284 |
T |
|
Q |
212 |
atttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||||||||||||| |
|
|
T |
4632283 |
ctttatgcctcaagttctctt |
4632263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 26963388 - 26963518
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| |
|
|
T |
26963388 |
tagcggaagcaaacaaaacattgaacataagtatgaacggatctacgacatgtttgatttatcaaggatatcaagaatta--gtattaggaatacctgga |
26963485 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaac |
133 |
Q |
|
|
||||||||| | || | |||||||| ||||||| |
|
|
T |
26963486 |
taaagcttttatggtagccctctcaacaacaac |
26963518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 3769673 - 3769586
Alignment:
Q |
7 |
aagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatac |
95 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||| |
|
|
T |
3769673 |
aagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttcattaatcaaggatattaataatta-ggtattaggaatac |
3769586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 19686378 - 19686599
Alignment:
Q |
4 |
cggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataa |
103 |
Q |
|
|
||||||||||||||| ||||||| | ||||| ||||||||||| ||||| || ||| |||||| |||||||||||| |||||||| ||||| ||| | || |
|
|
T |
19686378 |
cggaagcaaacaaaatattgaacgtaattatcatcggatctacaacatgcttgattaatcaagcatattaagaattcgggtattatgaata-ctgaacaa |
19686476 |
T |
|
Q |
104 |
agctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcctca |
203 |
Q |
|
|
|||||| | | || | | ||| || ||| ||| ||||||||||| ||||||||||||||| |||| || | || |||||||||||| | |||| |
|
|
T |
19686477 |
agctttgatgacagacatttcaacagcaatgatcaccaaagagagaagatgatctgaaacacacaa------tatcagcagctgatttggttcgttctca |
19686570 |
T |
|
Q |
204 |
accggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||| ||||||||||| ||||||| |
|
|
T |
19686571 |
accggtaccattatgcctcaatttctctt |
19686599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 35177770 - 35177678
Alignment:
Q |
142 |
aagagaggagatgatctgaaacagacaa--tagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||| |||||||||||||| |||| |||||||||||||| |||||||| || || |||||||| |||||||||||||||||||||||| |
|
|
T |
35177770 |
aagagaggtgatgatctgaaacacacaacatagagttagcggcgcctgatttgattatttctcaaccgatacatttatgcctcaagttctctt |
35177678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 50427483 - 50427356
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttat--------caaggatattaagaattagggtattaggaatacc |
96 |
Q |
|
|
|||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||| |||| | ||||||||||||||||||||||||||| |
|
|
T |
50427483 |
ggaagcaatcaaaacattgaa-atgattatgatcggatgtacgacatgtttaatttattgatttatcaagaagattaagaattagggtattaggaatacc |
50427385 |
T |
|
Q |
97 |
tggataaagctttcaaggcatccctctca |
125 |
Q |
|
|
|||||| ||| |||| || | |||||||| |
|
|
T |
50427384 |
tggatatagcgttcatggaagccctctca |
50427356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 26957023 - 26957081
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
26957023 |
gttagcggcgactgatttggttcttcctcaaccggtacctttatgcctcaagttctctt |
26957081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 9237470 - 9237402
Alignment:
Q |
6 |
gaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaa |
74 |
Q |
|
|
|||||||||| ||||||||| ||||||||| |||||| |||||||||||| |||||||||| ||||||| |
|
|
T |
9237470 |
gaagcaaacagaacattgaatatgattatgctcggatttacgacatgtttgatttatcaagtatattaa |
9237402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26956876 - 26956929
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtt |
54 |
Q |
|
|
||||||||||||| |||||||||||||| | ||||| ||||||||||||||||| |
|
|
T |
26956876 |
tagcggaagcaaataaaacattgaacataagtatgaacggatctacgacatgtt |
26956929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 50156046 - 50155990
Alignment:
Q |
24 |
aacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaatta |
80 |
Q |
|
|
||||| |||| |||||||| |||||||||||| |||||||||| ||||||| ||||| |
|
|
T |
50156046 |
aacataattaagatcggatatacgacatgtttgatttatcaagaatattaacaatta |
50155990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 3769509 - 3769462
Alignment:
Q |
174 |
gttagcggcggctgatttggtttttcctcaaccggtacatttatgcct |
221 |
Q |
|
|
||||| |||||||||||||||| |||||||||| ||| |||||||||| |
|
|
T |
3769509 |
gttagtggcggctgatttggttcttcctcaacccgtatatttatgcct |
3769462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 33045185 - 33045126
Alignment:
Q |
173 |
agttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||| ||||||||||||| ||| || |||||||||||| ||||| ||||||||||||| |
|
|
T |
33045185 |
agttaacggcggctgatttagttctttctcaaccggtacttttatatctcaagttctctt |
33045126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 50427281 - 50427238
Alignment:
Q |
189 |
tttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||| || ||||||||||||||||||||||||| ||||||| |
|
|
T |
50427281 |
tttggttcttactcaaccggtacatttatgcctcaacttctctt |
50427238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32284764 - 32284694
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatat |
71 |
Q |
|
|
|||||||| |||| |||| |||||||| || ||| ||| |||||| |||||||||||||||||| ||||| |
|
|
T |
32284764 |
tagcggaaacaaataaaatattgaacaggaatataatcagatctagaacatgttttatttatcaaagatat |
32284694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 4632898 - 4632869
Alignment:
Q |
2 |
agcggaagcaaacaaaacattgaacatgat |
31 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
4632898 |
agcggaagcaaacaaaacattgaacatgat |
4632869 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 666 - 897
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
666 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattagggtattaggaatacctgga |
765 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||| ||| |||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |
|
|
T |
766 |
taaagctttcatagcagccctctaatcaacgacgataaccaaagagagaagatgatctgaaacacacaatagttttagcggcggctgatttggttcttcc |
865 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
||||||||||| |||||||||||||||||||| |
|
|
T |
866 |
tcaaccggtacgtttatgcctcaagttctctt |
897 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 172937 - 173168
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |
|
|
T |
172937 |
tagcggaagcaaacaaaacattgaaaatgattatgatcggatctacgacatgtttaatttatcaaggatattaagaattaggatattaggaatacatgga |
173036 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcggctgatttggtttttcc |
200 |
Q |
|
|
||||||||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
173037 |
taaagctttcaagatagccctcttatcaacaacgataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcc |
173136 |
T |
|
Q |
201 |
tcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||||| |||| |||||||||||||||||||| |
|
|
T |
173137 |
tcaaccagtacctttatgcctcaagttctctt |
173168 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0236 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0236
Description:
Target: scaffold0236; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 5647 - 5465
Alignment:
Q |
1 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctgga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
5647 |
tagcggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgtttgatttatcaaggatattaagaattaggctattaggaatacctgga |
5548 |
T |
|
Q |
101 |
taaagctttcaaggcatccctctcatcaacaacgataaccaaagagaggagatgatctgaaacagacaatagagttagcggcg |
183 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
5547 |
taaagctttcaaggcagccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcg |
5465 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1114 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1114
Description:
Target: scaffold1114; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 232
Target Start/End: Complemental strand, 1174 - 965
Alignment:
Q |
27 |
atgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaagctttcaaggcatccctctcat |
126 |
Q |
|
|
||||||||||||||||| ||||||||||| | |||||| | ||||||| |||||| ||||||| |||| ||||||||| |||||| |||| | |||||| |
|
|
T |
1174 |
atgattatgatcggatcaacgacatgtttgacttatcatgcatattaacaattagagtattagaaatatctggataaaactttcatggcagctctctcaa |
1075 |
T |
|
Q |
127 |
caacaacgataaccaaagaga---ggagatgatctgaaacagaca-atagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctc |
222 |
Q |
|
|
|| |||| |||| |||||| | ||||||| |||||| ||| || ||||| |||||||||||||||| ||||||||||| || |||||||||| |
|
|
T |
1074 |
catcaacaataaaacaagagaaggtgtgatgatcggaaacacacaccaagggttagtggcggctgatttggttcttcctcaaccgttatctttatgcctc |
975 |
T |
|
Q |
223 |
aagttctctt |
232 |
Q |
|
|
|||||||||| |
|
|
T |
974 |
aagttctctt |
965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 38536 - 38434
Alignment:
Q |
5 |
ggaagcaaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaatacctggataaa |
104 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||||| || |
|
|
T |
38536 |
ggaagcaaacaaaacattgaacatagttatgatcggatctacaacatg-tttgtttatcaagaatattaataatta-ggtattaggaatacctggatgaa |
38439 |
T |
|
Q |
105 |
gcttt |
109 |
Q |
|
|
||||| |
|
|
T |
38438 |
gcttt |
38434 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0185 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0185
Description:
Target: scaffold0185; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 6025 - 5945
Alignment:
Q |
11 |
aaacaaaacattgaacatgattatgatcggatctacgacatgttttatttatcaaggatattaagaattagggtattaggaa |
92 |
Q |
|
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||| |
|
|
T |
6025 |
aaacaaaacattgaacatgaatatgatcggatctacgacatgtttgatttatcaaaaatattattaatta-ggtattaggaa |
5945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0185; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 5889 - 5826
Alignment:
Q |
169 |
atagagttagcggcggctgatttggtttttcctcaaccggtacatttatgcctcaagttctctt |
232 |
Q |
|
|
|||| ||||||| || || |||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
T |
5889 |
atagggttagcgacgactaatttggttcttcctcaaccggtacatttatgcctcaagttatctt |
5826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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