View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_high_75 (Length: 211)
Name: NF1681_high_75
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1681_high_75 |
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Alignment Details
Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 29316881 - 29316999
Alignment:
| Q |
76 |
ttttaccaagtttatattgttaaaatcactttaatttctccnnnnnnnntgaatgtacccataaacttttatagtatcaaataatgggagaaaataactc |
175 |
Q |
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| T |
29316881 |
ttttaccaagtttatattgttaaaatcactttaatttctccaaaaaaa-tgaatgtacccataaacttttatagtatcaaataatgggagaaaataactc |
29316979 |
T |
|
| Q |
176 |
acctggaggatcacaaaaca |
195 |
Q |
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|||||||||||||||||||| |
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| T |
29316980 |
acctggaggatcacaaaaca |
29316999 |
T |
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