View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_high_82 (Length: 201)
Name: NF1681_high_82
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1681_high_82 |
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Alignment Details
Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 30896289 - 30896098
Alignment:
| Q |
1 |
cctaggtacttagatccaccttatatttgatttattttattttggttgaaagctgaaaatcttctccatatatataaacaatttttagttcaagttttaa |
100 |
Q |
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| T |
30896289 |
cctaggtacttagatccaccacatatttgattcattttattttgtttgaaagctgaaaatcttctccatatatataaataatttttagttcaagttttaa |
30896190 |
T |
|
| Q |
101 |
atcgaacttgtttacattatttggagacaaactatggaaggacaa-nnnnnnnngttttaagtagaacgaagatgaggtacatggagtataat |
192 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
30896189 |
atcgaactt-tttacattatttggagacaaactatggaaggacaatttttttttgttttaagtagaacgaagatgaggtacatggagtataat |
30896098 |
T |
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