View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_low_18 (Length: 382)
Name: NF1681_low_18
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1681_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 95 - 373
Target Start/End: Complemental strand, 32725015 - 32724738
Alignment:
| Q |
95 |
aattaacctaaaaaattagagtagtgctttagataatccaaaatatataatctccgttaatgtatgtaatgtatggtccagatatgttcgtgtgtttcgt |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32725015 |
aattaacctaaaaaattagagtagtgctttagataatccaaaatatataatctccgttaatgtatgtaatgtatggtccagatttgttcgtgtgtttcgt |
32724916 |
T |
|
| Q |
195 |
tggctggcggttcgtaatattaagcattatcgaaaaaattatacaatgcagatcttagaaaataaataaccccaacaatttttctcnnnnnnnnnnnnnt |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
32724915 |
tggctggcggttcgtaatattaagcattatcgaaaaaattatacaatgcagatcttagaaaataaataaccccaacaatttttctc-aaaaacaaaaaat |
32724817 |
T |
|
| Q |
295 |
aaccccaacaacatccataaaaaattccaannnnnnnnnataagatatccccctctcccacgccaacaagtcgacccta |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| || | ||||||||||||||||| |
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| T |
32724816 |
aaccccaacaacatccataaaaaattccaattttttttcataagatatccccctctacctctccaacaagtcgacccta |
32724738 |
T |
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