View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1681_low_6 (Length: 482)
Name: NF1681_low_6
Description: NF1681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1681_low_6 |
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[»] scaffold0057 (1 HSPs) |
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[»] scaffold0449 (1 HSPs) |
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[»] scaffold0221 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 190 - 466
Target Start/End: Complemental strand, 48140447 - 48140171
Alignment:
Q |
190 |
ttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactctaatcgtaattaataataacattaataagaaaccatacttagggcctgtttg |
289 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
48140447 |
ttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactctaatcgtaattaataataacattaataagaaaccatacttagggcctgtttg |
48140348 |
T |
|
Q |
290 |
gattggcttatatagcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttcata |
389 |
Q |
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|
|||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
48140347 |
gattggcttatagagtttatctattggcataagttatgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttcata |
48140248 |
T |
|
Q |
390 |
agttatccaatattatttagaaaaacaacttatagcatattgaaaaacaatctagttattttatcttttgttataaa |
466 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
48140247 |
agttatccaatattaattagaaaaacaacttatagcatattgaaaaacaatctagttattttatcttttgttataaa |
48140171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 48140647 - 48140439
Alignment:
Q |
13 |
catcaatgaattatgaagccccaaacataagcctcacactcaaatacacaacatataataattattataatttaattcataaacaccataaatcaatcat |
112 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
48140647 |
catcaatgaattatgaagccccaaacataagcctcacactcaaatacacaacatataataattattataatttaattcataaacaccataaatcaatcat |
48140548 |
T |
|
Q |
113 |
aattgtcaagtcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttaca |
212 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
48140547 |
aattgtcaagtcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttaca |
48140448 |
T |
|
Q |
213 |
ttgacagtg |
221 |
Q |
|
|
||||||||| |
|
|
T |
48140447 |
ttgacagtg |
48140439 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 19302471 - 19302586
Alignment:
Q |
273 |
tacttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaattt |
371 |
Q |
|
|
||||||| |||||||| |||| ||||| | |||||||||| || |||||||| ||||||| | ||||||||||| |||||||||||||| | ||||||| |
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|
T |
19302471 |
tacttagaacctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattt |
19302570 |
T |
|
Q |
372 |
ttataagattttttca |
387 |
Q |
|
|
| |||| |||||||| |
|
|
T |
19302571 |
tcataaacttttttca |
19302586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 33601349 - 33601433
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||| | ||| |||| ||||| |||||||| |
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|
T |
33601349 |
agcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttca |
33601433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 48470201 - 48470117
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||| |||||||||||| | ||||||||||| | |||||||| | ||||| |||||||||||| |||||||||||||| |
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|
T |
48470201 |
agggcctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagctt |
48470117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 35169993 - 35170089
Alignment:
Q |
137 |
tgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaac |
235 |
Q |
|
|
||||||| |||||||| ||||||||||||| |||||||||| |||| || |||||||||||||||| ||| ||||||| ||| |||||| |||||| |
|
|
T |
35169993 |
tgactttaatcataactacttctaaagtca--cacatgattggttatgatttgttgacagtgtaaaagtatttgcattgacggtgtatcaaagttaaac |
35170089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 366
Target Start/End: Complemental strand, 46078258 - 46078167
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaac |
366 |
Q |
|
|
|||||||||| |||||||||||||| | ||||||||||||| |||||||| |||| | |||| ||||||| |||||||||||||| |||| |
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|
T |
46078258 |
ttagggcctggttggattggcttattttagcttatctattgacataagttttgtgggtttgttcgggagaagttatgaaaacagcttataac |
46078167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 5947396 - 5947330
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| ||||||| | ||||||||||||| |||| |
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|
T |
5947396 |
ggcctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaa |
5947330 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 21568457 - 21568518
Alignment:
Q |
326 |
tgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||||||||||||||| |||||||||||||| |||||||||| ||||| | |||||| |
|
|
T |
21568457 |
tgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttca |
21568518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 378
Target Start/End: Original strand, 19022524 - 19022599
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||||| || ||| |||| ||||||| ||||||||||||| |||||||||| ||| | |||||||| ||||| |
|
|
T |
19022524 |
agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataag |
19022599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 357
Target Start/End: Original strand, 4970707 - 4970785
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
||||||||||||||| ||||| | ||||||||| || ||||||| |||||||||||||||||||| |||||||||| |
|
|
T |
4970707 |
ggcctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaaca |
4970785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 18765415 - 18765373
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||| |||||||| |||||||||||||||||||| |
|
|
T |
18765415 |
agcttatctattgacataagttttgtgagactgtttgggagaa |
18765373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 38138403 - 38138480
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatga |
352 |
Q |
|
|
|||||||||||||||| || ||||| | |||||||||||||| |||| ||||||||||||| || |||||| ||||| |
|
|
T |
38138403 |
ttagggcctgtttggaatgacttatttgagcttatctattggaataaattctgtgagactgagtgagagaatttatga |
38138480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 11619077 - 11619181
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattt |
382 |
Q |
|
|
||||||||||||||||| | |||||||||| || |||||| | ||| || | |||||||||| |||||||||| ||| | |||||||| ||||| ||| |
|
|
T |
11619077 |
tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttt |
11619176 |
T |
|
Q |
383 |
tttca |
387 |
Q |
|
|
||||| |
|
|
T |
11619177 |
tttca |
11619181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 27863664 - 27863723
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttg |
362 |
Q |
|
|
|||||||| | ||||||||||| ||||||||| |||| ||||| ||||||||||||||| |
|
|
T |
27863664 |
agcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttg |
27863723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 36517736 - 36517649
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttg |
362 |
Q |
|
|
|||||||||||||||||| |||| | |||||| ||| ||||||||||| | | |||||||||||||||| ||| ||||||||||| |
|
|
T |
36517736 |
ttagggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagcttg |
36517649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 44989587 - 44989670
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatatagcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
||||||||| |||||| |||||||||| || ||||| | ||||||||| ||||||||||||||||| || |||||||||| |
|
|
T |
44989587 |
acttagggcatgtttgaattggcttattgagtttatccggtagcataagttttgtgagactgtttgggaaaacttatgaaaaca |
44989670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 425
Target Start/End: Original strand, 45790454 - 45790497
Alignment:
Q |
382 |
ttttcataagttatccaatattatttagaaaaacaacttatagc |
425 |
Q |
|
|
||||||||||||||||||||| |||| |||||||||||||||| |
|
|
T |
45790454 |
ttttcataagttatccaatatagtttataaaaacaacttatagc |
45790497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 46937037 - 46936954
Alignment:
Q |
155 |
cttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactct |
238 |
Q |
|
|
|||||||||||| ||| |||||||||| | || |||||||| |||||| ||||||| | ||||||||||||||||||||| |
|
|
T |
46937037 |
cttctaaagtcacacatatgattgattgtgatttgttgacacgataaaactttttacaccaagagtgcatcaaaattaaactct |
46936954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 17944257 - 17944366
Alignment:
Q |
279 |
gggcctgtttggattggcttatata-gcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataa |
377 |
Q |
|
|
||||||||||||| || ||||| || ||||||||| ||||||||| | ||||||||||||| || || ||| |||||||||| | ||| |||| ||| |
|
|
T |
17944257 |
gggcctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatat |
17944356 |
T |
|
Q |
378 |
gattttttca |
387 |
Q |
|
|
| |||||||| |
|
|
T |
17944357 |
gcttttttca |
17944366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 24547760 - 24547667
Alignment:
Q |
145 |
atcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactct |
238 |
Q |
|
|
|||||||| ||||||||| ||| | | ||||||| || | || | ||||||||||||||| ||||||| |||| ||| |||||| | ||||||| |
|
|
T |
24547760 |
atcataactacttctaaaatcacagatatgattggttgtgatttattgacagtgtaaaactttttacactgacggtgtatcaaattcaaactct |
24547667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 27288060 - 27288003
Alignment:
Q |
321 |
agttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||| ||||||||| ||||| |||| |||||||||||||| |||||||||| ||||| |
|
|
T |
27288060 |
agttttgtgagactatttggaagaacttatgaaaacagcttataacaattttcataag |
27288003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 19020305 - 19020345
Alignment:
Q |
172 |
atgattgattataatgtgttgacagtgtaaaacattttaca |
212 |
Q |
|
|
|||| ||||| ||||||||||||| |||||||||||||||| |
|
|
T |
19020305 |
atgaatgattgtaatgtgttgacaatgtaaaacattttaca |
19020345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 31365111 - 31365211
Alignment:
Q |
288 |
tggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttc |
386 |
Q |
|
|
||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| | |||||||| ||||| ||||||| |
|
|
T |
31365111 |
tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttc |
31365210 |
T |
|
Q |
387 |
a |
387 |
Q |
|
|
| |
|
|
T |
31365211 |
a |
31365211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 11092827 - 11092940
Alignment:
Q |
123 |
tcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgc |
222 |
Q |
|
|
||||||||| || |||||||||| ||||| ||||||||||||| ||| |||||||||| |||| || ||||||||||||| |||||||| | ||||||| |
|
|
T |
11092827 |
tcattagaaagatttgacttttattataaccacttctaaagtcaaacagatgattgattctaatatggtgacagtgtaaaa-attttacacttacagtgc |
11092925 |
T |
|
Q |
223 |
atcaaaattaaactc |
237 |
Q |
|
|
|| |||||||||||| |
|
|
T |
11092926 |
atgaaaattaaactc |
11092940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 584196 - 584119
Alignment:
Q |
285 |
gtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||| ||||| | |||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
T |
584196 |
gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagctt |
584119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 20880627 - 20880525
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattt |
382 |
Q |
|
|
||||||||||||||||| | |||||||||| | ||||||||| | ||||| |||||||||| |||||||||||||| | |||||||| ||||| ||| |
|
|
T |
20880627 |
tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt |
20880528 |
T |
|
Q |
383 |
ttt |
385 |
Q |
|
|
||| |
|
|
T |
20880527 |
ttt |
20880525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 377
Target Start/End: Original strand, 31365232 - 31365322
Alignment:
Q |
288 |
tggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataa |
377 |
Q |
|
|
||||||||||||| | || |||||||||||||||| || ||||| |||||||||||||| |||||| ||||||| | |||||||| |||| |
|
|
T |
31365232 |
tggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataa |
31365322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 39980888 - 39980802
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||| |||||||||||||||| | | |||||||||| | ||||||||| ||||||||||||| ||||| |||||||||||||| |
|
|
T |
39980888 |
ttagggtctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagctt |
39980802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 24085258 - 24085335
Alignment:
Q |
285 |
gtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||||||||| | |||||||||| |||||||||| |||||||||| || |||||| |||||||||||||| |
|
|
T |
24085258 |
gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagctt |
24085335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 387
Target Start/End: Complemental strand, 49557024 - 49556905
Alignment:
Q |
275 |
cttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagac------tgtttgggagaatgtatgaaaacagcttgtaaca |
367 |
Q |
|
|
|||||||||| ||||||||||||||| | |||||||| | ||||||||||| |||||||| | ||| |||||| |||||||||||||| | ||| |
|
|
T |
49557024 |
cttagggcctatttggattggcttatctgagcttatcaagtggcataagttttgtgagactcttagtctttcagagaatttatgaaaacagcttatgaca |
49556925 |
T |
|
Q |
368 |
atttttataagattttttca |
387 |
Q |
|
|
||||| ||||| |||||||| |
|
|
T |
49556924 |
attttcataagcttttttca |
49556905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 26911693 - 26911632
Alignment:
Q |
326 |
tgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||| |||||||| ||| |||||||||||||| | |||||||| ||||| |||||||| |
|
|
T |
26911693 |
tgtgagaccgtttgggataatatatgaaaacagcttatgacaattttcataagtttttttca |
26911632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 21367816 - 21367740
Alignment:
Q |
286 |
tttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||| | || ||||||| ||||||||| |||| ||||||||||||||| |||||||||||||| |
|
|
T |
21367816 |
tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagctt |
21367740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 387
Target Start/End: Complemental strand, 30444024 - 30443940
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||||| |||||||| || |||||||||||||| ||| |||||||||||||| | |||||||| | ||| |||||||| |
|
|
T |
30444024 |
agcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttca |
30443940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 47132470 - 47132397
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaa |
355 |
Q |
|
|
|||||||||||||||||||| | |||||||||| ||||| |||| ||||||||||||| |||||| |||||||| |
|
|
T |
47132470 |
gcctgtttggattggcttatttgagcttatctactggca--agttttgtgagactgttttggagaacttatgaaaa |
47132397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 339
Target Start/End: Original strand, 20170630 - 20170689
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttg |
339 |
Q |
|
|
|||||||||||||||||||| | |||||||||| || |||||||| ||||||||||||| |
|
|
T |
20170630 |
gcctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttg |
20170689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 22882 - 22963
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||| ||||||||||| | | ||| |||| ||||||||||| ||||||| ||||| |||||| |||||||||||||| |
|
|
T |
22882 |
gcctgttgagattggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagctt |
22963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 8246346 - 8246273
Alignment:
Q |
164 |
tcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
||||||| ||||||| || | || ||||||| |||||||| | ||||||||| |||| ||||||||||||||| |
|
|
T |
8246346 |
tcatacatatgattggttgtgatttgttgactttgtaaaacttcttacattgaaagtgtatcaaaattaaactc |
8246273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 18405752 - 18405825
Alignment:
Q |
286 |
tttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacag |
358 |
Q |
|
|
|||||||||| |||| | |||||||||| || |||||||| |||||||||||||| |||| ||||||||||| |
|
|
T |
18405752 |
tttggattggtttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacag |
18405825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 361
Target Start/End: Complemental strand, 201692 - 201664
Alignment:
Q |
333 |
ctgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
201692 |
ctgtttgggagaatgtatgaaaacagctt |
201664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 402495 - 402539
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||| || |||||||||||||||| ||||||||||||||| |
|
|
T |
402495 |
cataagttttgcaagactgtttgggagaacgtatgaaaacagctt |
402539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 2101190 - 2101306
Alignment:
Q |
123 |
tcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgc |
222 |
Q |
|
|
||||||||| ||| |||||||||||||||| | || | |||| | ||||||||||| | | ||||| ||||| ||||| | |||| ||||||||||| |
|
|
T |
2101190 |
tcattagaaacatttgacttttatcataaccagttttcaagttacacacatgattggtagtgatgtgctgacaatgtaacattttttgcattgacagtgg |
2101289 |
T |
|
Q |
223 |
at-caaaattaaactct |
238 |
Q |
|
|
|| ||||||||||||| |
|
|
T |
2101290 |
atgaaaaattaaactct |
2101306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 3448569 - 3448525
Alignment:
Q |
193 |
acagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
|||||||||||| ||||||| |||||||| |||||| |||||||| |
|
|
T |
3448569 |
acagtgtaaaactttttacactgacagtgtatcaaagttaaactc |
3448525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 3845502 - 3845538
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttg |
339 |
Q |
|
|
|||||||||| ||||||||||| |||||||||||||| |
|
|
T |
3845502 |
agcttatctactggcataagttttgtgagactgtttg |
3845538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 9832672 - 9832752
Alignment:
Q |
282 |
cctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||| ||||| ||||| | ||||||| ||||| |||||||| ||| | |||||||||||||| | |||||||||||| |
|
|
T |
9832672 |
cctgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagctt |
9832752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 42799880 - 42799960
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agc-ttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
|||||||||||||||||||||| | ||| ||||||| || |||| ||| ||||| ||| |||||||||| |||||||||| |
|
|
T |
42799880 |
gggcctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca |
42799960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 43046782 - 43046738
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||| ||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
43046782 |
catatgttttgtgagactgtttgggagaacttatgaaaacagctt |
43046738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 388
Target Start/End: Original strand, 51929277 - 51929381
Alignment:
Q |
285 |
gtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatttt |
383 |
Q |
|
|
|||||||||| ||||| | | ||||| || ||||||||||| ||||| ||| |||| |||||| | ||||||||| || | |||||||| ||| | |||| |
|
|
T |
51929277 |
gtttggattgacttatttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgacaattttcataggctttt |
51929376 |
T |
|
Q |
384 |
ttcat |
388 |
Q |
|
|
||||| |
|
|
T |
51929377 |
ttcat |
51929381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 54426197 - 54426090
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataaga |
379 |
Q |
|
|
|||||||||||||||||||| | |||||||||| ||||||||||| |||||||||| ||||||||| || ||||||||||| | |||||||| ||||| |
|
|
T |
54426197 |
gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagc |
54426098 |
T |
|
Q |
380 |
ttttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
54426097 |
ttttttca |
54426090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 385
Target Start/End: Original strand, 39603090 - 39603191
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattt |
382 |
Q |
|
|
||||||||||||||||| | ||||| |||||||| ||||||| |||||||||||||||||||| || ||||||||||| | |||||||||||||| ||| |
|
|
T |
39603090 |
tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagcttt |
39603188 |
T |
|
Q |
383 |
ttt |
385 |
Q |
|
|
||| |
|
|
T |
39603189 |
ttt |
39603191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 21731570 - 21731679
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataa |
377 |
Q |
|
|
||||||||||||||||| |||| | ||| |||||| || |||||||| ||||||| |||||||||||| |||||||||||||| | |||||||| |||| |
|
|
T |
21731570 |
gggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataa |
21731669 |
T |
|
Q |
378 |
gattttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
21731670 |
acttttttca |
21731679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 15173223 - 15173326
Alignment:
Q |
285 |
gtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatttt |
383 |
Q |
|
|
|||||||||| ||||| | | |||||||| || |||||||| ||||||||||||||||||| | |||||||| ||||| | |||||||| ||||| |||| |
|
|
T |
15173223 |
gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagttttt |
15173322 |
T |
|
Q |
384 |
ttca |
387 |
Q |
|
|
|||| |
|
|
T |
15173323 |
ttca |
15173326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 17822780 - 17822886
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||||||||| ||||| | |||||||||| || |||||||||||||||||| ||| |||||| |||||||||||||| | ||| |||| ||||| |
|
|
T |
17822780 |
ggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataag |
17822879 |
T |
|
Q |
379 |
atttttt |
385 |
Q |
|
|
|||||| |
|
|
T |
17822880 |
ctttttt |
17822886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 1132156 - 1132290
Alignment:
Q |
103 |
aatcaatcataattgtcaagtcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaa |
202 |
Q |
|
|
|||||||||||| |||| ||||||||| ||| |||||||||||||||| | |||||||| || |||||||| || || | |||||| |||| ||||| |
|
|
T |
1132156 |
aatcaatcataaccgtcagatcattagaaacatttgacttttatcataactaattctaaagacacacacatgactggttgtgatgtgtagacaatgtaat |
1132255 |
T |
|
Q |
203 |
acattttacattgacagtgcatcaaaattaaactct |
238 |
Q |
|
|
||||||| |||||||| || ||||||||||||| |
|
|
T |
1132256 |
tt-ttttacactgacagtgtatgaaaattaaactct |
1132290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 387
Target Start/End: Complemental strand, 24169420 - 24169310
Alignment:
Q |
278 |
agggcctgtttggattggcttat-atagcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttata |
376 |
Q |
|
|
||||| ||||||||||||||||| | || ||||||| ||||||||||| ||||||||| |||| ||||| | | |||| ||||| | ||| |||| ||| |
|
|
T |
24169420 |
agggcttgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcata |
24169321 |
T |
|
Q |
377 |
agattttttca |
387 |
Q |
|
|
||||||||||| |
|
|
T |
24169320 |
agattttttca |
24169310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 44798037 - 44797972
Alignment:
Q |
278 |
agggcctgtttggattggcttatata-gcttatctattggcataagttctgtgagactgtttggga |
342 |
Q |
|
|
|||||||||||||||||||| || || ||||||||| || |||||||| ||||||||||||||||| |
|
|
T |
44798037 |
agggcctgtttggattggctgatttaagcttatctactgacataagttttgtgagactgtttggga |
44797972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 8705093 - 8705017
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacag |
358 |
Q |
|
|
||||||||||||||| || | ||||||||||||| |||||||| |||||||||| ||||||||| ||| ||||||| |
|
|
T |
8705093 |
ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaacttataaaaacag |
8705017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 18815180 - 18815112
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||||||||||| | |||||| ||| | ||||||||| |||||||||||||| ||||| |
|
|
T |
18815180 |
agggcctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaa |
18815112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 40830947 - 40831053
Alignment:
Q |
282 |
cctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatga-aaacagcttgtaacaatttttataaga |
379 |
Q |
|
|
|||||||||||||||| || | ||||||||||||| |||||||| |||||||||||| || |||| ||||| ||||||||| |||| ||||||||| |
|
|
T |
40830947 |
cctgtttggattggctaatttgagcttatctattg-cataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagc |
40831045 |
T |
|
Q |
380 |
ttttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
40831046 |
ttttttca |
40831053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 26780 - 26862
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||||||| | |||||||| | ||||||||| | ||| ||||||||| ||||| |||||||||||||| |
|
|
T |
26780 |
ggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagctt |
26862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 21570856 - 21570958
Alignment:
Q |
137 |
tgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaa-aacattttacattgacagtgcatcaaaattaaac |
235 |
Q |
|
|
||||||||||||| || ||||||||||||| ||||||||||| || | ||||| ||||| ||||| |||||||| | |||| |||| |||||||||| |
|
|
T |
21570856 |
tgacttttatcatgacgacttctaaagtcacacacatgattggttgtgatgtgctgacaatgtaattttattttacactaacagcgcatgaaaattaaac |
21570955 |
T |
|
Q |
236 |
tct |
238 |
Q |
|
|
||| |
|
|
T |
21570956 |
tct |
21570958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 39691064 - 39691146
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||| |||| ||||| | |||||||||| | ||||||||| |||||||||||||| |||||| |||| |||||||| |
|
|
T |
39691064 |
ggcctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagctt |
39691146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 13126494 - 13126599
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatt |
381 |
Q |
|
|
|||||||||||||||||| | |||||| ||| | |||||||| ||||||||||||||| |||| ||| |||||||||| | ||| || | ||||| || |
|
|
T |
13126494 |
ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt |
13126593 |
T |
|
Q |
382 |
ttttca |
387 |
Q |
|
|
|||||| |
|
|
T |
13126594 |
ttttca |
13126599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 372
Target Start/End: Complemental strand, 22030334 - 22030265
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
||||| |||||| ||||||||| |||||| || |||||||||| |||||||||||||| | |||||||| |
|
|
T |
22030334 |
agcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaatttt |
22030265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 42403936 - 42404036
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttata |
376 |
Q |
|
|
||||||||||||||||| ||||| | |||||||| | || |||||||| |||| | || ||||||||||| | |||||||||||| | |||||||| ||| |
|
|
T |
42403936 |
agggcctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttatgacaattttcata |
42404034 |
T |
|
Q |
377 |
ag |
378 |
Q |
|
|
|| |
|
|
T |
42404035 |
ag |
42404036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 458
Target Start/End: Complemental strand, 9760481 - 9760403
Alignment:
Q |
382 |
ttttcataagttatccaatattatttagaaaaacaacttatagcatattgaaaaacaatcta--gttattttatctttt |
458 |
Q |
|
|
|||||||||||| |||||||| ||| ||||||||||||||||||||| ||||| ||| || |||||||||||||| |
|
|
T |
9760481 |
ttttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatctttt |
9760403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 45387238 - 45387321
Alignment:
Q |
157 |
tctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactctaa |
240 |
Q |
|
|
|||||||||||| | ||||||| || | || ||||| |||||||||||||||||||||| || ||||||||| |||||||| |
|
|
T |
45387238 |
tctaaagtcataaatatgattggttgtgatttgttggtagtgtaaaacattttacattgatgatgtatcaaaattgaactctaa |
45387321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 53294143 - 53294201
Alignment:
Q |
382 |
ttttcataagttatccaatattatttagaaaaacaacttatagcatattgaaaaacaat |
440 |
Q |
|
|
|||||||||||| || ||||| |||| |||||||||||||||||||| ||||||||| |
|
|
T |
53294143 |
ttttcataagttctctaatatagtttataaaaacaacttatagcatatacaaaaacaat |
53294201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 25904137 - 25904246
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataa |
377 |
Q |
|
|
|||||||||| | ||| ||||| | |||||||| | || ||||| || ||||||||||||||||||| |||||||||||||| | || |||| |||| |
|
|
T |
25904137 |
gggcctgttttggttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataa |
25904236 |
T |
|
Q |
378 |
gattttttca |
387 |
Q |
|
|
| |||||||| |
|
|
T |
25904237 |
gcttttttca |
25904246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 35571543 - 35571612
Alignment:
Q |
277 |
tagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||| |||||||||||||||||| | |||||||||| | ||||||||| |||| || ||||||||||| |
|
|
T |
35571543 |
tagggtctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaa |
35571612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 49940120 - 49940164
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||| |||||||||||||| ||||| |||||||||||||| |
|
|
T |
49940120 |
cataagttttgtgagactgtttgagagaacttatgaaaacagctt |
49940164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 50681044 - 50681112
Alignment:
Q |
319 |
taagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||| |||||||||||||| ||||| ||||||||||| | | |||||||| ||||| |||||||| |
|
|
T |
50681044 |
taagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttca |
50681112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 55302404 - 55302296
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||| ||||| |||||| | |||||||||| ||||||||||| |||||| ||||| ||| || ||| ||||||||| | |||||||| |||| |
|
|
T |
55302404 |
ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaag |
55302305 |
T |
|
Q |
379 |
attttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
55302304 |
cttttttca |
55302296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 34)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 280 - 378
Target Start/End: Complemental strand, 2295251 - 2295152
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||||| |||||||||| | |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||| ||||| |
|
|
T |
2295251 |
ggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataag |
2295152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 38247489 - 38247400
Alignment:
Q |
273 |
tacttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||||||||| |||| | | |||||||| ||||||||||| |||| |||||||||||||| |||||||||||||| |
|
|
T |
38247489 |
tacttagggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagctt |
38247400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 41187346 - 41187435
Alignment:
Q |
148 |
ataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
|||||||||||||||||||||||||| || || || |||||| |||||||||||||||||||||||| | ||| |||||||||||| |
|
|
T |
41187346 |
ataacaacttctaaagtcatacacataataagttgcgatatgttgaaagtgtaaaacattttacattgacattacatgaaaattaaactc |
41187435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 43230687 - 43230793
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
||||||||||||||||| ||| | ||||| |||| ||||||||||| | |||| ||||| ||||||| ||||||||||||||| ||| |||||||||| |
|
|
T |
43230687 |
ggcctgtttggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagcttg--acagtttttataag |
43230784 |
T |
|
Q |
379 |
attttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
43230785 |
cttttttca |
43230793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 3233933 - 3234037
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatt |
381 |
Q |
|
|
|||||||||||| ||||| | |||||||||| || | |||||| |||||||||||| ||||||| |||||||||| ||| ||||| |||| ||||| || |
|
|
T |
3233933 |
ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt |
3234032 |
T |
|
Q |
382 |
ttttc |
386 |
Q |
|
|
||||| |
|
|
T |
3234033 |
ttttc |
3234037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 473317 - 473211
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataaga |
379 |
Q |
|
|
|||||||| ||||||||||| | ||| |||||| ||||||||||||||||| || |||||||||| |||||||| ||||| | |||||||| ||||| |
|
|
T |
473317 |
gcctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagc |
473219 |
T |
|
Q |
380 |
ttttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
473218 |
ttttttca |
473211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 37617384 - 37617479
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
||||||||||| ||||| | || |||||||||| | |||||| |||||||||||||| |||||| |||||||||||||| | |||| ||| ||||| |
|
|
T |
37617384 |
tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttcataag |
37617479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 2778040 - 2777971
Alignment:
Q |
286 |
tttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaa |
354 |
Q |
|
|
||||||||||||||| | |||||||||||| ||||||||| ||||||||||||| |||||| ||||||| |
|
|
T |
2778040 |
tttggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaa |
2777971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 49938867 - 49938794
Alignment:
Q |
314 |
tggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
||||||||||| ||||||| |||||||||||| |||||||||||||| | |||||||| | ||| |||||||| |
|
|
T |
49938867 |
tggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttca |
49938794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 51929497 - 51929562
Alignment:
Q |
322 |
gttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
||||||||||| ||||||||||||| ||||||||||||| | |||||||| ||||| |||||||| |
|
|
T |
51929497 |
gttctgtgagattgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttca |
51929562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 14576569 - 14576677
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
||||||||||||||||||||| | |||||||||| |||| ||| || |||| ||||||||||| || | |||||||||||| | |||||||| | ||| |
|
|
T |
14576569 |
ggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaag |
14576668 |
T |
|
Q |
379 |
attttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
14576669 |
cttttttca |
14576677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 373
Target Start/End: Complemental strand, 33186462 - 33186367
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaattttt |
373 |
Q |
|
|
|||||||||||||||||||||| | || ||||| |||||||||||| ||||||||||| | |||||| ||||||||| | || | ||||||||| |
|
|
T |
33186462 |
gggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaattttt |
33186367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 5721074 - 5720988
Alignment:
Q |
286 |
tttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaattt |
371 |
Q |
|
|
||||||||||||||| | |||||| ||| | ||||||||| ||| ||||||||||||||| |||||||||||||| | ||||||| |
|
|
T |
5721074 |
tttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgacaattt |
5720988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 16979630 - 16979580
Alignment:
Q |
188 |
tgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactct |
238 |
Q |
|
|
||||||||||||||| | ||||||| |||||||| |||||||||||||||| |
|
|
T |
16979630 |
tgttgacagtgtaaatctttttacactgacagtgtatcaaaattaaactct |
16979580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 2181926 - 2181793
Alignment:
Q |
103 |
aatcaatcataattgtcaagtcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaa |
202 |
Q |
|
|
|||||||||||| ||||| ||||||||| || ||| ||||||||||| ||| ||||||| | | ||||||||| || | || |||||||||||||| |
|
|
T |
2181926 |
aatcaatcataacagtcaaatcattagaataatttgatttttatcataatcactactaaagtaacatacatgattggttgtgttgggttgacagtgtaaa |
2181827 |
T |
|
Q |
203 |
acattttacattgacagtgcatcaaaattaaact |
236 |
Q |
|
|
| ||| ||| ||||| ||| | ||||||||||| |
|
|
T |
2181826 |
aggtttaacaatgacaatgcgtgaaaattaaact |
2181793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 4274444 - 4274493
Alignment:
Q |
188 |
tgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
|||||| |||||||||||| ||||||||| | |||||||||||||||||| |
|
|
T |
4274444 |
tgttgatagtgtaaaacatcttacattgataatgcatcaaaattaaactc |
4274493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 34795354 - 34795443
Alignment:
Q |
273 |
tacttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||| |||||||||||||||||| |||| | |||| ||| |||||||| || || ||||||||||||||||| |||||||||||||| |
|
|
T |
34795354 |
tactaagggcctgtttggattgggttatttgagctagcctactggcataaattttgcgagactgtttgggagaacttatgaaaacagctt |
34795443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 276 - 356
Target Start/End: Complemental strand, 36872887 - 36872806
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaac |
356 |
Q |
|
|
||||||||||||||||||||||||| | |||||| ||| |||||||| || |||||||||| ||||||| ||||||||| |
|
|
T |
36872887 |
ttagggcctgtttggattggcttatttaagcttaactaacaacataagttttgcgagactgttttggagaatttatgaaaac |
36872806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 2295348 - 2295280
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||||||||||| | |||||||||| || | |||||| | ||||||| |||||||||| |
|
|
T |
2295348 |
agggcctgtttggattggcttatttgagcttatctactgacttaagttttctgagactatttgggagaa |
2295280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 14385702 - 14385774
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||| ||||||||| |||||||||||| | |||||||||| ||||||||||| |||||||| ||| |||||| |
|
|
T |
14385702 |
acttggggcctgttcggattggcttatttgagcttatctactggcataagtttcgtgagactattttggagaa |
14385774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 387
Target Start/End: Complemental strand, 29904882 - 29904798
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||||| | ||||||||| |||||||||||||| ||||| ||| |||||||||| | ||||||| | ||| |||||||| |
|
|
T |
29904882 |
agcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttca |
29904798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 34952359 - 34952291
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||| |||||||||||||||||| | |||||||||||||| ||||| | ||||||| | |||||||||| |
|
|
T |
34952359 |
agggtctgtttggattggcttatttgagcttatctattgggataagatttgtgagattatttgggagaa |
34952291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 38001712 - 38001668
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
38001712 |
cataagttttgtgagactgtttgggagaacttatgaaaacagctt |
38001668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 3131679 - 3131746
Alignment:
Q |
137 |
tgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaac |
204 |
Q |
|
|
|||||||||||||||| |||| ||||||| ||||||||||| || |||| || ||||||||||||| |
|
|
T |
3131679 |
tgacttttatcataactactttcaaagtcacacacatgattgtttgtaatatgccgacagtgtaaaac |
3131746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 15477710 - 15477655
Alignment:
Q |
278 |
agggcctgtttggattggctta-tatagcttatctattggcataagttctgtgaga |
332 |
Q |
|
|
|||||||||||||||||||||| || |||||||||| | ||||||||| ||||||| |
|
|
T |
15477710 |
agggcctgtttggattggcttattagagcttatctacttgcataagttttgtgaga |
15477655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 42174896 - 42174849
Alignment:
Q |
382 |
ttttcataagttatccaatattatttagaaaaacaacttatagcatat |
429 |
Q |
|
|
|||||||||||| |||||||| | ||| |||||||||||||||||||| |
|
|
T |
42174896 |
ttttcataagttctccaatataacttataaaaacaacttatagcatat |
42174849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 3234044 - 3234102
Alignment:
Q |
382 |
ttttcataagttatccaatattatttagaaaaacaacttatagcatattgaaaaacaat |
440 |
Q |
|
|
|||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||| |
|
|
T |
3234044 |
ttttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaat |
3234102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 3242173 - 3242091
Alignment:
Q |
155 |
cttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
|||||||||||| ||| | ||||| |||| || || | ||||||| |||||||||||| ||| ||| ||||||||||||||| |
|
|
T |
3242173 |
cttctaaagtcagacataagattggttatgatttgctaacagtgttaaacattttacactgagtgtgtatcaaaattaaactc |
3242091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 33204333 - 33204375
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||||||||| || |||||||| |||||||||||||||||||| |
|
|
T |
33204333 |
agcttatctactgacataagttttgtgagactgtttgggagaa |
33204375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 50644174 - 50644248
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
||||||||||| ||||| | |||||||||| | |||| ||| |||||||||||||||||||| |||||||||| |
|
|
T |
50644174 |
tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaaca |
50644248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 4445815 - 4445774
Alignment:
Q |
326 |
tgtgagactgtttgggagaatgtatgaaaacagcttgtaaca |
367 |
Q |
|
|
||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
T |
4445815 |
tgtgagactgtttgggagaatttatgaaagcagcttataaca |
4445774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 28287958 - 28287893
Alignment:
Q |
276 |
ttagggcctgtttggattggctta-tatagcttatctattggcataagttctgtgagactgtttgg |
340 |
Q |
|
|
||||| |||||||||||||||||| || || |||| |||||||||||| | ||||||||| ||||| |
|
|
T |
28287958 |
ttaggacctgtttggattggcttattagagtttatatattggcataagctttgtgagactatttgg |
28287893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 7941719 - 7941679
Alignment:
Q |
321 |
agttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||| ||||||||||||||| ||||| |||||||||||||| |
|
|
T |
7941719 |
agttttgtgagactgtttggaagaatttatgaaaacagctt |
7941679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 9572054 - 9572098
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||| | |||||||||||||||||||| |||||||||||||| |
|
|
T |
9572054 |
cataagatttgtgagactgtttgggagaacttatgaaaacagctt |
9572098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 33)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 10231913 - 10231797
Alignment:
Q |
123 |
tcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgc |
222 |
Q |
|
|
|||||| || ||| |||||||||||||||| | ||||||| ||| ||| |||||||||| |||| ||| ||||||||||||| ||||||| ||||| | |
|
|
T |
10231913 |
tcattaaaatcatttgacttttatcataactatttctaaaatcacacatatgattgattgtaatatgtggacagtgtaaaactttttacactgacaatat |
10231814 |
T |
|
Q |
223 |
atcaaaattaaactcta |
239 |
Q |
|
|
||||||||||||||||| |
|
|
T |
10231813 |
atcaaaattaaactcta |
10231797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 276 - 428
Target Start/End: Complemental strand, 30331910 - 30331755
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaattttta |
374 |
Q |
|
|
||||||| ||||||||||| ||||| | |||||||||| || |||||||| |||||||||||||||||||| |||||||| | ||| | |||||||| | |
|
|
T |
30331910 |
ttagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttca |
30331811 |
T |
|
Q |
375 |
taagatt--ttttcataagttatccaatattatttagaaaaacaacttatagcata |
428 |
Q |
|
|
||| || |||||||||||| |||||||| ||| ||||| | ||||||||||| |
|
|
T |
30331810 |
caagctttattttcataagttctccaatatatcttataaaaatagcttatagcata |
30331755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 15305835 - 15305721
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
||||||||||||||||||||||||||| | ||||||||||||| |||||||| ||||| ||||||||| |||| | ||| |||| ||| | ||||||| |
|
|
T |
15305835 |
acttagggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaatttt |
15305736 |
T |
|
Q |
373 |
tataagattttttca |
387 |
Q |
|
|
||||| |||||||| |
|
|
T |
15305735 |
cataagtttttttca |
15305721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 43279460 - 43279552
Alignment:
Q |
297 |
ttatatagcttatctattggcataagttctgtgagactgtttgg--gagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||| ||||||||||| | ||||||||| ||||||||||||||| |||||| |||||||||||||| | |||||||| ||||| |||||||| |
|
|
T |
43279460 |
ttatttagcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttca |
43279552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 42659122 - 42659208
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||| ||||||||| ||||||||| | ||||||| || ||||||||||| |||||||||||||||||||| | |||||||||||| |
|
|
T |
42659122 |
ttaggacctgtttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagctt |
42659208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 2097512 - 2097380
Alignment:
Q |
105 |
tcaatcataattgtcaagtcattagaagcatctgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaac |
204 |
Q |
|
|
||||||||||| || | ||||||| || ||| | |||||| ||||||| ||||| |||||| ||||||||||| || | ||||||| | ||| |||||| |
|
|
T |
2097512 |
tcaatcataatcgttaggtcattataaacattttacttttttcataaccgcttctgaagtcacacacatgattgcttgtgatgtgttcatagtataaaac |
2097413 |
T |
|
Q |
205 |
attttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
|||||||| ||||||| || ||| |||||||| |
|
|
T |
2097412 |
attttacactgacagtctatgaaatttaaactc |
2097380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 7928211 - 7928271
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtt |
337 |
Q |
|
|
||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||| |
|
|
T |
7928211 |
agggcctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgtt |
7928271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 15757597 - 15757681
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
||||||| || ||||||||||| |||||||||| |||||||||| ||||||||| |||| | |||||||| | ||| |||||||| |
|
|
T |
15757597 |
agcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttca |
15757681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 383
Target Start/End: Complemental strand, 32592744 - 32592637
Alignment:
Q |
279 |
gggcctgtttggattggcttatat---agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttat |
375 |
Q |
|
|
|||||||||||||||||||||||| ||||||||| ||||||||||| || ||| || |||||||||| |||||||| ||||| |||||||| || |
|
|
T |
32592744 |
gggcctgtttggattggcttatatttaagcttatctgatggcataagttttgggagtctatttgggagaacttatgaaaatagcttacgacaattttcat |
32592645 |
T |
|
Q |
376 |
aagatttt |
383 |
Q |
|
|
||| |||| |
|
|
T |
32592644 |
aagctttt |
32592637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 42868393 - 42868462
Alignment:
Q |
277 |
tagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||||||||||||||||| ||||| | |||||||||||||||||| ||| |||| |||||||||||||| |
|
|
T |
42868393 |
tagggcctgtttggattgccttatttgagcttatctattggcatacgtttcgtgacactgtttgggagaa |
42868462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 11864061 - 11863990
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatatag-cttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||||||||||||||| | | ||||| || |||| |||| |||||||||||||||||||||| |
|
|
T |
11864061 |
acttagggcctgtttggattggcttatttggtcttatttactggc-taaggtctgtgagactgtttgggagaa |
11863990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 35991359 - 35991276
Alignment:
Q |
154 |
acttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
|||| |||| ||| ||||||| |||||||| || || | ||||||||||| |||||||||||||||| || |||||||||||| |
|
|
T |
35991359 |
acttgtaaaatcacacacatgcttgattatgatttgctatcagtgtaaaactttttacattgacagtgtattaaaattaaactc |
35991276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 346
Target Start/End: Complemental strand, 3312234 - 3312165
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaat |
346 |
Q |
|
|
||||| ||||||||||||||||| | |||||||||| || | |||||| |||||||||||| |||||||| |
|
|
T |
3312234 |
agggcttgtttggattggcttatttgagcttatctactgacgtaagttttgtgagactgttggggagaat |
3312165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 9174946 - 9174910
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttg |
339 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||| |
|
|
T |
9174946 |
agcttatctattggcataagttatgtgagactgtttg |
9174910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 32837453 - 32837389
Alignment:
Q |
304 |
gcttatctattggcataagttct-gtgagactgtttgggagaatgtatgaaaacagcttgtaaca |
367 |
Q |
|
|
||||||||| ||| |||||| || ||||||||||||||||||| |||||||||||||| ||||| |
|
|
T |
32837453 |
gcttatctagtggtataagtacttgtgagactgtttgggagaacttatgaaaacagcttataaca |
32837389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 41851666 - 41851586
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatttt |
383 |
Q |
|
|
||||||||||||| || ||||| |||||||||| |||||||||| |||| ||||| ||| | ||| |||| ||||| |||| |
|
|
T |
41851666 |
agcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagctttt |
41851586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 26202189 - 26202075
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
|||||||||||||||||||| ||||| | | ||||||| || |||||||| ||||||| | |||| ||||| ||||| |||| ||| | |||||||| |
|
|
T |
26202189 |
acttagggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaatttt |
26202090 |
T |
|
Q |
373 |
tataagattttttca |
387 |
Q |
|
|
||||| |||||||| |
|
|
T |
26202089 |
cataagcttttttca |
26202075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 31744453 - 31744371
Alignment:
Q |
280 |
ggcctgtttggattggcttatatag-cttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||||||| | | |||||||| | |||||||| | |||||||||||| ||||| | |||||||||||| |
|
|
T |
31744453 |
ggcctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagctt |
31744371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 387
Target Start/End: Original strand, 41812005 - 41812115
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttata |
376 |
Q |
|
|
||||| ||||||||||||||||| | ||||||||| | || ||||| ||||| ||||||||||||| | |||||||||||| | ||| |||| ||| |
|
|
T |
41812005 |
agggcttgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcata |
41812104 |
T |
|
Q |
377 |
agattttttca |
387 |
Q |
|
|
|| |||||||| |
|
|
T |
41812105 |
agcttttttca |
41812115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 27317025 - 27317082
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttg |
339 |
Q |
|
|
|||||||||||| ||||| | |||||||||||||||||||| | ||||| |||||||| |
|
|
T |
27317025 |
ctgtttggattgacttattttagcttatctattggcataagctttgtgacactgtttg |
27317082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 27317533 - 27317456
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
|||||||||||||| ||||| | |||||||||| | |||||||| | |||||||||||| ||||| |||||||||| |
|
|
T |
27317533 |
gcctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaaca |
27317456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 29933510 - 29933559
Alignment:
Q |
188 |
tgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactc |
237 |
Q |
|
|
||||||||||||||||||||||| ||| |||||| |||||| | |||||| |
|
|
T |
29933510 |
tgttgacagtgtaaaacattttaaattaacagtgtatcaaattaaaactc |
29933559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 33319737 - 33319795
Alignment:
Q |
286 |
tttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||| | ||||| |||| ||||||||||| ||||||||||||||||||| |
|
|
T |
33319737 |
tttggattggcttatttgagcttgtctactggcataagtt--gtgagactgtttgggagaa |
33319795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 41733989 - 41734034
Alignment:
Q |
188 |
tgttgacagtgtaaaacattttacattgacagtgcatcaaaattaa |
233 |
Q |
|
|
|||||| |||||||||| ||||| |||||||||| ||||||||||| |
|
|
T |
41733989 |
tgttgatagtgtaaaactttttaaattgacagtgtatcaaaattaa |
41734034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 361
Target Start/End: Complemental strand, 44590178 - 44590097
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||| ||||||||||||||| | || |||||||| | |||||||| |||||||| ||||| |||| |||||||||||||| |
|
|
T |
44590178 |
gcctctttggattggcttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaacagctt |
44590097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 4607082 - 4607014
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||||||||||| | |||||||||| ||||||| ||||||||| |||||||||| |
|
|
T |
4607082 |
agggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaa |
4607014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 13166084 - 13166144
Alignment:
Q |
103 |
aatcaatcataattgtcaagtcattagaagcatctgacttttatcataacaacttctaaag |
163 |
Q |
|
|
||||||| |||| |||||| || |||||| ||| ||||||||||||||| |||||||||| |
|
|
T |
13166084 |
aatcaataataactgtcaaatcgttagaaacatttgacttttatcataatcacttctaaag |
13166144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 15370238 - 15370302
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataag-ttctgtgagactgtttggga |
342 |
Q |
|
|
||||||||||||||| ||||| | |||||||||| ||||||||| | ||||||||||||||||| |
|
|
T |
15370238 |
ggcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggga |
15370302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 16451239 - 16451195
Alignment:
Q |
313 |
ttggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
|||| |||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
16451239 |
ttggaataagttctgtgagaccgtttgggagaacttatgaaaaca |
16451195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 24101045 - 24100977
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatttttt |
385 |
Q |
|
|
|||||||| |||||||||||||||||||| |||| ||||| ||| | ||||| || ||||| |||||| |
|
|
T |
24101045 |
cataagttttgtgagactgtttgggagaacttatggaaacaccttatgacaatattcataagctttttt |
24100977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 36125487 - 36125434
Alignment:
Q |
306 |
ttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| |
|
|
T |
36125487 |
ttatctactggcataagttctgtgagagtgtt--agagaatatatgaaaacagctt |
36125434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 36534885 - 36534841
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||| ||||||||||||||||| || |||||||||||||| |
|
|
T |
36534885 |
cataagttttgtgagactgtttgggataacttatgaaaacagctt |
36534841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 43529776 - 43529856
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctg-tgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||| |||| ||||| | |||||||||||||| ||||| || ||| ||||||||||||||| |||||||||||||| |
|
|
T |
43529776 |
ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagctt |
43529856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 43717843 - 43717928
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacag |
358 |
Q |
|
|
||||||||||| ||||||||||||||| | ||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |
|
|
T |
43717843 |
acttagggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag |
43717928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 43045641 - 43045748
Alignment:
Q |
281 |
gcctgtttggattggcttatata-gcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataaga |
379 |
Q |
|
|
|||||||||||||||||||| || ||||||||| | ||||||| | ||||||||||||| ||||| |||||||||||||| ||||||||| ||||| |
|
|
T |
43045641 |
gcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagc |
43045740 |
T |
|
Q |
380 |
ttttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
43045741 |
ttttttca |
43045748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 28763498 - 28763417
Alignment:
Q |
304 |
gcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatttttt |
385 |
Q |
|
|
||||||||| | |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||| |
|
|
T |
28763498 |
gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttt |
28763417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 30251367 - 30251451
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||||||||| | |||||||||| || |||||||| ||||||||||||||||||| || ||||||||||| |
|
|
T |
30251367 |
agggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagctt |
30251451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 35643900 - 35644011
Alignment:
Q |
277 |
tagggcctgtttggattggcttatatag-cttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttat |
375 |
Q |
|
|
||||||||||| |||||||||||| | | |||||||| |||||||| || ||||||||||||||||| || |||||||| || || | |||||||| || |
|
|
T |
35643900 |
tagggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat |
35643999 |
T |
|
Q |
376 |
aagattttttca |
387 |
Q |
|
|
||| |||||||| |
|
|
T |
35644000 |
aagcttttttca |
35644011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 36963272 - 36963362
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
|||||||||||||||||| | |||| ||||| ||||||||||| |||||||||||||||||||| || |||||||||| | |||||||| |
|
|
T |
36963272 |
ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaatttt |
36963362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 372
Target Start/End: Complemental strand, 26771396 - 26771327
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
|||||||||| |||||||||| |||||||||||||||||||| |||||||||||||| | |||||||| |
|
|
T |
26771396 |
agcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaatttt |
26771327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 38648506 - 38648425
Alignment:
Q |
280 |
ggcctgtttggattggcttatata-gcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagct |
360 |
Q |
|
|
|||||||| |||||||||||| || | ||||||| || |||||||| ||||||||||||||||||| ||||||||||||| |
|
|
T |
38648506 |
ggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagct |
38648425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 35749509 - 35749593
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
||||||||||||| |||||||| || ||| ||||||| ||||| ||||||||||||||||| || |||| |||| |||||||| |
|
|
T |
35749509 |
agcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttca |
35749593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 38602483 - 38602416
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||||||||||||||| ||||| | |||||||||| || |||||||| |||||| ||||||||||||| |
|
|
T |
38602483 |
gggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaa |
38602416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 10758210 - 10758280
Alignment:
Q |
317 |
cataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||| |||||||||||||| ||||| |||||||||||||| | |||||||| | ||| |||||||| |
|
|
T |
10758210 |
cataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttca |
10758280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 387
Target Start/End: Complemental strand, 18133801 - 18133703
Alignment:
Q |
290 |
gattggcttatata-gcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
||||||||||| || ||||||||| | | ||||||| ||||||||||||||||||| | ||||| |||||| |||||||||| | ||| |||||||| |
|
|
T |
18133801 |
gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttca |
18133703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 387
Target Start/End: Complemental strand, 12976360 - 12976259
Alignment:
Q |
287 |
ttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatttttt |
385 |
Q |
|
|
|||| ||||||||| | |||||||||| | ||||||| | ||||||||||||| | |||| ||||| |||||||| |||||||||| | ||| |||||| |
|
|
T |
12976360 |
ttggtttggcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagctttttt |
12976261 |
T |
|
Q |
386 |
ca |
387 |
Q |
|
|
|| |
|
|
T |
12976260 |
ca |
12976259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 6882083 - 6882001
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatatagcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagct |
360 |
Q |
|
|
||||||| ||||||||||||||||| || || | ||| | |||||||| |||||||||||||||||||| ||||||||||||| |
|
|
T |
6882083 |
ttagggcttgtttggattggcttatcta-ctgacatat-gacataagttttgtgagactgtttgggagaacctatgaaaacagct |
6882001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 35534527 - 35534635
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataa |
377 |
Q |
|
|
|||||||||| || || ||||| | |||||||||| | |||||||| |||||||||||||| ||||| | |||||||||||| | |||||||| | || |
|
|
T |
35534527 |
gggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaa |
35534626 |
T |
|
Q |
378 |
gattttttc |
386 |
Q |
|
|
| ||||||| |
|
|
T |
35534627 |
gcttttttc |
35534635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 9130238 - 9130297
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttggga |
342 |
Q |
|
|
|||||||||| |||||| | |||||||||| ||||||||||| ||||||||| ||||||| |
|
|
T |
9130238 |
tgtttggattagcttatttgagcttatctactggcataagttttgtgagactatttggga |
9130297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 30011784 - 30011717
Alignment:
Q |
145 |
atcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttaca |
212 |
Q |
|
|
|||||||| ||||||||| ||| ||| |||||||||| | || |||||||||||||||| ||||||| |
|
|
T |
30011784 |
atcataactacttctaaaatcacacatatgattgattttgatttgttgacagtgtaaaatgttttaca |
30011717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 18591915 - 18591957
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||||||||||||| ||||||| | |||||||||||||||||| |
|
|
T |
18591915 |
agcttatctattggtataagttttatgagactgtttgggagaa |
18591957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 24827287 - 24827333
Alignment:
Q |
188 |
tgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaa |
234 |
Q |
|
|
|||||||| |||||||||||||||||||||| | |||||||||||| |
|
|
T |
24827287 |
tgttgacaatgtaaaacattttacattgacaaagtatcaaaattaaa |
24827333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 40859703 - 40859796
Alignment:
Q |
285 |
gtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||||||||||| | ||||||||| | |||||||| |||||| |||||| ||||| | |||||||||||||| | |||||||| ||||| |
|
|
T |
40859703 |
gtttggattggcttatttgagcttatctgctaacataagttttgtgaggctgttttggagact-tatgaaaacagcttatgacaattttcataag |
40859796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 44792807 - 44792745
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||||||| | |||||||||| ||| |||| || ||||||||||||| |||||| |
|
|
T |
44792807 |
tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaa |
44792745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 372
Target Start/End: Complemental strand, 15180698 - 15180602
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
||||| ||||||||||||||||||| | || ||||||| || |||||||| | ||||||| ||| ||||||| | ||||||||| || | |||||||| |
|
|
T |
15180698 |
ttaggacctgtttggattggcttatttgagtttatctactgccataagttttatgagact-ttttggagaatttctgaaaacaggttttgacaatttt |
15180602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 26762887 - 26762990
Alignment:
Q |
137 |
tgacttttatcataacaacttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaaca---ttttacattgacagtgcatcaaaattaa |
233 |
Q |
|
|
||||||| ||||||| ||||||||||||||||| |||||||||| | || | |||| | |||| |||| | ||||| |||||||| ||||| ||||| |
|
|
T |
26762887 |
tgactttaatcataattacttctaaagtcatacaaatgattgattgtgattttttgaaaatgtagaacatgttattacactgacagtgtatcaacattaa |
26762986 |
T |
|
Q |
234 |
actc |
237 |
Q |
|
|
|||| |
|
|
T |
26762987 |
actc |
26762990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 29705914 - 29705947
Alignment:
Q |
137 |
tgacttttatcataacaacttctaaagtcataca |
170 |
Q |
|
|
|||||||||||||||| ||||||||||||||||| |
|
|
T |
29705914 |
tgacttttatcataaccacttctaaagtcataca |
29705947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 346
Target Start/End: Original strand, 29818857 - 29818926
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaat |
346 |
Q |
|
|
||||| ||||||||||||| ||| | |||||||||| | |||||||| ||||||||||||| ||||||| |
|
|
T |
29818857 |
agggcatgtttggattggcatatttgagcttatctactatcataagttttgtgagactgtttcggagaat |
29818926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 12496985 - 12497053
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||| ||||||||| |||| | ||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
T |
12496985 |
agggcctatttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaa |
12497053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 27754535 - 27754479
Alignment:
Q |
302 |
tagcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacag |
358 |
Q |
|
|
|||||||| |||| |||||||| ||||||||| |||||||||| ||||||||||| |
|
|
T |
27754535 |
tagcttatttattatcataagttttgtgagactatttgggagaacttatgaaaacag |
27754479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 31716166 - 31716250
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
|||||||||||||||||| || | ||||||||||| |||||| | |||||||||||| | ||| | || ||||| |||||||| |
|
|
T |
31716166 |
agcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttca |
31716250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 16937800 - 16937906
Alignment:
Q |
282 |
cctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagat |
380 |
Q |
|
|
||||||||||||||||||| | |||||||||| | ||||||||| ||||||| ||||||| |||| |||||||||||||| | |||| ||| ||||| | |
|
|
T |
16937800 |
cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagct |
16937899 |
T |
|
Q |
381 |
tttttca |
387 |
Q |
|
|
||||||| |
|
|
T |
16937900 |
tttttca |
16937906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 34102222 - 34102310
Alignment:
Q |
274 |
acttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||||||||||| | ||||| | |||||| ||||||||||||||| ||||| |||||||||| |||| |||||||| ||||| |
|
|
T |
34102222 |
acttagggcctgtttggaatcacttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagctt |
34102310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 12433079 - 12433170
Alignment:
Q |
271 |
catacttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||| ||||||||||||||||||||||| | | ||||| || ||||||| ||| ||||||| |||||||||||| |||||||| ||||| |
|
|
T |
12433079 |
catactaagggcctgtttggattggcttatttgaacttatttactggcataggttttgtgagattgtttgggagaagttatgaaaatagctt |
12433170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 10640109 - 10640003
Alignment:
Q |
279 |
gggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataa |
377 |
Q |
|
|
||||||||||||||| |||||| | || ||||||| || |||||||| ||||| | |||||||||||| |||||||||||||| | ||| |||| |||| |
|
|
T |
10640109 |
gggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa |
10640010 |
T |
|
Q |
378 |
gattttt |
384 |
Q |
|
|
| ||||| |
|
|
T |
10640009 |
gcttttt |
10640003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 378
Target Start/End: Complemental strand, 32942748 - 32942650
Alignment:
Q |
281 |
gcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||||||||| |||||| ||||| |||| || |||||||| ||| |||||||||||||||| |||||| ||||||| | ||| |||| ||||| |
|
|
T |
32942748 |
gcctgtttggattgacttatacgagcttttctactgacataagttttgtttgactgtttgggagaatttatgaatacagcttatgacatttttcataag |
32942650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 43301035 - 43300953
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagc |
359 |
Q |
|
|
||||| ||||||||||||||||| | ||||||| || ||||||||||| | |||||||||| ||||||| ||| |||||||| |
|
|
T |
43301035 |
agggcatgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagc |
43300953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 16458036 - 16458093
Alignment:
Q |
410 |
aaaaacaacttatagcatattgaaaaacaatct-agttattttatcttttgttataaa |
466 |
Q |
|
|
|||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||| |
|
|
T |
16458036 |
aaaaacaacttatagcatatacaaaaacaatttaagttattttatcttttgctataaa |
16458093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 32941622 - 32941545
Alignment:
Q |
283 |
ctgtttggattggcttat-atagctt-atctattggcataagttctgtgagactgtttgggagaatgtatgaaaacag |
358 |
Q |
|
|
|||||||||||| ||||| | ||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||||| |
|
|
T |
32941622 |
ctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacag |
32941545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 43051618 - 43051535
Alignment:
Q |
154 |
acttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactcta |
239 |
Q |
|
|
|||||||||||||||| |||| ||||| || ||||||||||||||||| |||||||||||| | | ||||||||||||||||| |
|
|
T |
43051618 |
acttctaaagtcatacctatgaatgattgcgat-tgttgacagtgtaaaac-ttttacattgactgcgtatcaaaattaaactcta |
43051535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 1773024 - 1773101
Alignment:
Q |
283 |
ctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||||||||||| | |||||||||| | |||||||| |||||||||| |||||||| |||||||||||||| |
|
|
T |
1773024 |
ctgtttggattggcttattttagcttatctacttccataagttttgtgagactg--tgggagaacttatgaaaacagctt |
1773101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 7705911 - 7705995
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||| ||||| | ||| |||||| | ||||||||| ||||| || |||||||||| |||||||||||||| |
|
|
T |
7705911 |
agggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagctt |
7705995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 7705316 - 7705379
Alignment:
Q |
103 |
aatcaatcataattgtcaagtcattagaagcatctgacttttatcataacaacttctaaagtca |
166 |
Q |
|
|
|||||||||||| |||| |||||| ||| ||| |||||||||||||||| |||| |||||||| |
|
|
T |
7705316 |
aatcaatcataacagtcaggtcattggaaacatttgacttttatcataaccacttttaaagtca |
7705379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 16457935 - 16458002
Alignment:
Q |
320 |
aagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagattttttca |
387 |
Q |
|
|
||||| |||||||||||||||||||| |||||||||||||| | ||| |||| ||||| | |||||| |
|
|
T |
16457935 |
aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttca |
16458002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 25461559 - 25461629
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaat |
346 |
Q |
|
|
|||||||| |||||||||||||||| | ||||||||||| ||||||||| ||||| ||||||||| ||||| |
|
|
T |
25461559 |
ttagggcccgtttggattggcttatttgagcttatctatcagcataagtt-tgtgatactgtttggtagaat |
25461629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 12425704 - 12425662
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||||||||| || |||||||| |||||||||||||||||||| |
|
|
T |
12425704 |
agcttatctactgtcataagttttgtgagactgtttgggagaa |
12425662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 387
Target Start/End: Original strand, 12857251 - 12857361
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttata |
376 |
Q |
|
|
||||| |||||||||||| |||| | ||||||||||||| | |||||| ||||| ||| || |||||| |||||||||| ||| | |||||||| | | |
|
|
T |
12857251 |
agggcttgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcaca |
12857350 |
T |
|
Q |
377 |
agattttttca |
387 |
Q |
|
|
|| |||||||| |
|
|
T |
12857351 |
agcttttttca |
12857361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 387
Target Start/End: Complemental strand, 15015974 - 15015891
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgta-acaatttttataagattttttca |
387 |
Q |
|
|
|||||||||| || |||||| | |||||||||||||||||||| |||||||| | ||| | |||||||| |||||||||||||| |
|
|
T |
15015974 |
agcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaata--ttgaagacaattttcataagattttttca |
15015891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 16252643 - 16252685
Alignment:
Q |
154 |
acttctaaagtcatacacatgattgattataatgtgttgacag |
196 |
Q |
|
|
||||||||||||| |||||||||||||| | |||||||||||| |
|
|
T |
16252643 |
acttctaaagtcacacacatgattgattgtgatgtgttgacag |
16252685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 32372775 - 32372701
Alignment:
Q |
272 |
atacttagggcctgtttggattggcttatatagc-ttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||| ||||| ||| || |||||||||| | || ||||||| ||||||||||| ||||||||||||||| |||| |
|
|
T |
32372775 |
atactaagggcttgtatgtattggcttatttggccttatctactggcataagttttgtgagactgtttggaagaa |
32372701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 39248221 - 39248171
Alignment:
Q |
311 |
tattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||| ||| |||||||||| |
|
|
T |
39248221 |
tattagcataagttttgtgagactgtttgggagaacttataaaaacagctt |
39248171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 41981644 - 41981698
Alignment:
Q |
305 |
cttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagc |
359 |
Q |
|
|
|||||||| | |||| |||| |||||||||||||||||||| |||||||||||| |
|
|
T |
41981644 |
cttatctactagcattagttttgtgagactgtttgggagaacttatgaaaacagc |
41981698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 42100466 - 42100400
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
||||||||||||| ||||||| | ||||||||||||||||||| || |||| |||||| || ||||| |
|
|
T |
42100466 |
ggcctgtttggatgggcttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaa |
42100400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 1464972 - 1465017
Alignment:
Q |
316 |
gcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||||| ||||||||| ||||||| |||||||||||||| |
|
|
T |
1464972 |
gcataagttctgcgagactgttcgggagaacttatgaaaacagctt |
1465017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 9107240 - 9107163
Alignment:
Q |
285 |
gtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||| ||||| | || ||||||| || |||||||| ||||||| |||||||||||| ||||||||||||| |
|
|
T |
9107240 |
gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagctt |
9107163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 34736439 - 34736508
Alignment:
Q |
277 |
tagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaa |
345 |
Q |
|
|
|||||| ||||||||||| ||||| | ||||||||| || |||||||| |||||||| ||||||||||| |
|
|
T |
34736439 |
tagggcatgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaa |
34736508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 367
Target Start/End: Original strand, 35445786 - 35445847
Alignment:
Q |
306 |
ttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaaca |
367 |
Q |
|
|
||||||| || |||||||| ||||||||| |||| ||||| |||||||||||||| ||||| |
|
|
T |
35445786 |
ttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca |
35445847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 10992035 - 10992071
Alignment:
Q |
196 |
gtgtaaaacattttacattgacagtgcatcaaaatta |
232 |
Q |
|
|
|||||||| |||||||||| ||||||||||||||||| |
|
|
T |
10992035 |
gtgtaaaatattttacattaacagtgcatcaaaatta |
10992071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 361
Target Start/End: Original strand, 9559364 - 9559419
Alignment:
Q |
306 |
ttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |
|
|
T |
9559364 |
ttatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagctt |
9559419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 6538672 - 6538587
Alignment:
Q |
277 |
tagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||||||||||| ||||| | || |||| || ||||||||||| ||||||||||| |||||||| ||||||||||||| |
|
|
T |
6538672 |
tagggcctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagctt |
6538587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 387
Target Start/End: Complemental strand, 848147 - 848036
Alignment:
Q |
276 |
ttagggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaattttta |
374 |
Q |
|
|
||||||||||||||||||| ||||| | ||||||||||| | |||||||| ||||||||||||||| |||| ||| ||||| |||| | ||| |||| |
|
|
T |
848147 |
ttagggcctgtttggattgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttct |
848049 |
T |
|
Q |
375 |
taagattttttca |
387 |
Q |
|
|
|||| |||||||| |
|
|
T |
848048 |
taagcttttttca |
848036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 4163304 - 4163212
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttat |
375 |
Q |
|
|
||||||||||||||||| | |||||||||| ||||||||||| | ||||||||| | ||||| |||||||||| ||| | ||||||||||| |
|
|
T |
4163304 |
tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttttat |
4163212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 4224925 - 4224833
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttat |
375 |
Q |
|
|
||||||||||||||||| | |||||||||| ||||||||||| | ||||||||| | ||||| |||||||||| ||| | ||||||||||| |
|
|
T |
4224925 |
tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttttat |
4224833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 33074895 - 33074949
Alignment:
Q |
303 |
agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
||||||||||||| ||| |||| |||||||||||| ||||||||| ||||||||| |
|
|
T |
33074895 |
agcttatctattgccatgagttttgtgagactgttggggagaatggatgaaaaca |
33074949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 30536637 - 30536576
Alignment:
Q |
300 |
tatagcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
||||||||||||| |||| |||||| |||||||||||||||||| | |||||||| ||||| |
|
|
T |
30536637 |
tatagcttatctactggcgtaagttttgtgagactgtttgggaggacttatgaaaatagctt |
30536576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 10645304 - 10645378
Alignment:
Q |
284 |
tgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaaca |
357 |
Q |
|
|
|||||||||||||| || | || ||||||| || |||||||| ||| |||||||||||||||| |||||||||| |
|
|
T |
10645304 |
tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca |
10645378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 30926674 - 30926581
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttt |
372 |
Q |
|
|
||||||||||| ||||||||| | ||||||| | |||||||| || ||||||||||||| |||| |||||||||||||| | |||||||| |
|
|
T |
30926674 |
ggcctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaatttt |
30926581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 34009447 - 34009496
Alignment:
Q |
311 |
tattggcataagttctgtgagactgtttgggagaatgtatgaaaacagct |
360 |
Q |
|
|
|||||||||| | | |||||||| |||||||||||| ||||||||||||| |
|
|
T |
34009447 |
tattggcatatgatttgtgagacagtttgggagaatttatgaaaacagct |
34009496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 35069525 - 35069585
Alignment:
Q |
278 |
agggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtt |
337 |
Q |
|
|
|||||||||||| |||||||||| | |||||||||| || |||||||| ||| |||||||| |
|
|
T |
35069525 |
agggcctgtttgtattggcttatttgagcttatctactgacataagttttgtaagactgtt |
35069585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 24748 - 24694
Alignment:
Q |
307 |
tatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagctt |
361 |
Q |
|
|
|||||||||||||| ||| |||||||||||||||||||| ||| |||||||||| |
|
|
T |
24748 |
tatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagctt |
24694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0449 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0449
Description:
Target: scaffold0449; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 10587 - 10670
Alignment:
Q |
154 |
acttctaaagtcatacacatgattgattataatgtgttgacagtgtaaaacattttacattgacagtgcatcaaaattaaactcta |
239 |
Q |
|
|
|||||||||||||||| |||| ||||| || |||||||||| |||||| |||||||||||| | | ||||||||||||||||| |
|
|
T |
10587 |
acttctaaagtcatacctatgaatgattgcgat-tgttgacagtataaaac-ttttacattgactgcgtatcaaaattaaactcta |
10670 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0221 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0221
Description:
Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 22386 - 22278
Alignment:
Q |
280 |
ggcctgtttggattggcttatat-agcttatctattggcataagttctgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataag |
378 |
Q |
|
|
|||||||| ||||| |||||| | |||||||||| ||||||||||| |||||| ||||| ||| || ||| ||||||||| | |||||||| |||| |
|
|
T |
22386 |
ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaag |
22287 |
T |
|
Q |
379 |
attttttca |
387 |
Q |
|
|
|||||||| |
|
|
T |
22286 |
cttttttca |
22278 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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