View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1711-Insertion-4 (Length: 373)

Name: NF1711-Insertion-4
Description: NF1711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1711-Insertion-4
NF1711-Insertion-4
[»] chr4 (53 HSPs)
chr4 (109-372)||(52810985-52811244)
chr4 (166-372)||(52811192-52811395)
chr4 (8-102)||(52810833-52810927)
chr4 (24-109)||(46528920-46529005)
chr4 (8-109)||(11290191-11290292)
chr4 (8-109)||(33912065-33912166)
chr4 (25-115)||(2016548-2016638)
chr4 (27-109)||(50868013-50868095)
chr4 (14-109)||(52810612-52810707)
chr4 (27-109)||(15665175-15665257)
chr4 (22-115)||(37097726-37097819)
chr4 (166-219)||(52811343-52811396)
chr4 (29-109)||(29669365-29669445)
chr4 (29-109)||(43972377-43972457)
chr4 (29-109)||(51469503-51469583)
chr4 (29-109)||(53740204-53740284)
chr4 (37-115)||(29669688-29669766)
chr4 (29-99)||(45427254-45427324)
chr4 (27-99)||(5488399-5488471)
chr4 (45-109)||(22867106-22867170)
chr4 (29-109)||(23018492-23018572)
chr4 (31-111)||(27048412-27048492)
chr4 (29-109)||(43943695-43943775)
chr4 (29-109)||(45426938-45427018)
chr4 (29-109)||(51470505-51470585)
chr4 (37-109)||(52827242-52827314)
chr4 (29-109)||(56509631-56509711)
chr4 (29-99)||(990579-990649)
chr4 (29-99)||(12016685-12016755)
chr4 (29-99)||(12016893-12016963)
chr4 (29-115)||(29113465-29113551)
chr4 (29-115)||(48843019-48843105)
chr4 (29-99)||(52214647-52214717)
chr4 (28-109)||(26941883-26941964)
chr4 (29-109)||(27634328-27634408)
chr4 (37-109)||(29734583-29734655)
chr4 (29-109)||(35269033-35269113)
chr4 (234-286)||(52811382-52811434)
chr4 (29-109)||(53738210-53738290)
chr4 (29-109)||(53739888-53739968)
chr4 (32-99)||(991236-991303)
chr4 (44-111)||(28085714-28085781)
chr4 (29-91)||(21497685-21497747)
chr4 (29-91)||(21498227-21498289)
chr4 (44-109)||(37288886-37288951)
chr4 (29-109)||(13254405-13254485)
chr4 (31-99)||(25753609-25753677)
chr4 (29-97)||(36558468-36558536)
chr4 (49-109)||(43972061-43972121)
chr4 (45-109)||(49380682-49380746)
chr4 (45-109)||(49380898-49380962)
chr4 (29-109)||(50858034-50858114)
chr4 (29-109)||(56511319-56511399)
[»] chr1 (46 HSPs)
chr1 (11-109)||(17295000-17295098)
chr1 (8-109)||(29228470-29228571)
chr1 (8-109)||(45858677-45858778)
chr1 (21-109)||(51722275-51722364)
chr1 (29-109)||(28509389-28509469)
chr1 (37-109)||(27958057-27958129)
chr1 (13-109)||(29228697-29228793)
chr1 (10-115)||(31411539-31411648)
chr1 (14-109)||(12287870-12287965)
chr1 (24-109)||(4187511-4187595)
chr1 (28-109)||(38474305-38474386)
chr1 (22-109)||(18585060-18585147)
chr1 (30-109)||(19937046-19937125)
chr1 (14-109)||(33562114-33562209)
chr1 (24-109)||(45443242-45443327)
chr1 (29-109)||(4022127-4022207)
chr1 (30-109)||(31305733-31305812)
chr1 (29-115)||(20735538-20735624)
chr1 (44-109)||(2697348-2697413)
chr1 (32-109)||(17419809-17419886)
chr1 (22-109)||(29383618-29383705)
chr1 (29-107)||(36332136-36332214)
chr1 (8-109)||(40521474-40521575)
chr1 (29-99)||(43423311-43423381)
chr1 (27-97)||(45403474-45403544)
chr1 (32-109)||(27957814-27957891)
chr1 (39-108)||(36326929-36326998)
chr1 (24-109)||(40642773-40642858)
chr1 (38-111)||(40664230-40664303)
chr1 (27-115)||(20735771-20735859)
chr1 (21-109)||(29413370-29413458)
chr1 (37-109)||(39649094-39649166)
chr1 (29-108)||(31789373-31789451)
chr1 (32-99)||(43361557-43361624)
chr1 (29-111)||(2104262-2104344)
chr1 (29-99)||(29273227-29273297)
chr1 (31-109)||(30604464-30604542)
chr1 (29-99)||(33879780-33879850)
chr1 (29-99)||(33964405-33964475)
chr1 (29-111)||(35024249-35024331)
chr1 (37-99)||(37600904-37600966)
chr1 (44-109)||(8520110-8520175)
chr1 (37-110)||(12233304-12233377)
chr1 (29-109)||(13959424-13959504)
chr1 (29-109)||(15392047-15392127)
chr1 (37-109)||(52846859-52846931)
[»] chr7 (52 HSPs)
chr7 (8-109)||(36495688-36495789)
chr7 (8-108)||(47346304-47346404)
chr7 (14-115)||(47346081-47346182)
chr7 (8-109)||(33909159-33909260)
chr7 (24-109)||(37756162-37756246)
chr7 (14-109)||(27585278-27585373)
chr7 (14-109)||(34914907-34915002)
chr7 (14-109)||(36495911-36496006)
chr7 (27-109)||(37755939-37756020)
chr7 (27-109)||(37761913-37761994)
chr7 (24-109)||(34748800-34748885)
chr7 (8-109)||(36270678-36270779)
chr7 (29-109)||(43384282-43384362)
chr7 (14-109)||(36270457-36270552)
chr7 (24-109)||(14991506-14991591)
chr7 (24-109)||(15421117-15421202)
chr7 (8-109)||(19843506-19843606)
chr7 (32-109)||(39549983-39550060)
chr7 (29-109)||(7135245-7135325)
chr7 (27-99)||(33909338-33909410)
chr7 (32-111)||(37272050-37272129)
chr7 (30-109)||(37530926-37531005)
chr7 (29-109)||(1663606-1663687)
chr7 (32-109)||(28910054-28910131)
chr7 (32-109)||(36092604-36092681)
chr7 (29-101)||(257269-257341)
chr7 (29-109)||(6783060-6783140)
chr7 (29-109)||(36092394-36092474)
chr7 (32-115)||(19843723-19843806)
chr7 (26-109)||(20296285-20296368)
chr7 (22-109)||(22206273-22206360)
chr7 (22-109)||(22228379-22228466)
chr7 (29-99)||(1661193-1661263)
chr7 (8-66)||(24240387-24240445)
chr7 (24-106)||(22686728-22686812)
chr7 (29-109)||(36492545-36492625)
chr7 (37-109)||(40121628-40121700)
chr7 (29-99)||(39808466-39808536)
chr7 (29-111)||(43288284-43288366)
chr7 (29-99)||(43288564-43288634)
chr7 (24-66)||(44314311-44314353)
chr7 (24-109)||(27729471-27729556)
chr7 (32-97)||(31374799-31374864)
chr7 (37-106)||(36237827-36237896)
chr7 (45-109)||(6782848-6782912)
chr7 (39-111)||(6959978-6960050)
chr7 (29-109)||(23396631-23396711)
chr7 (45-109)||(29252598-29252662)
chr7 (29-109)||(29780169-29780249)
chr7 (45-109)||(40121957-40122021)
chr7 (37-109)||(41670605-41670677)
chr7 (37-109)||(43167903-43167975)
[»] chr8 (36 HSPs)
chr8 (8-109)||(17607195-17607296)
chr8 (8-109)||(35908700-35908801)
chr8 (24-109)||(15711518-15711603)
chr8 (26-109)||(14019830-14019913)
chr8 (24-115)||(18464086-18464176)
chr8 (29-111)||(34248097-34248179)
chr8 (29-111)||(34248379-34248461)
chr8 (44-109)||(8276571-8276636)
chr8 (24-109)||(38287961-38288046)
chr8 (29-109)||(18905878-18905958)
chr8 (29-101)||(32931431-32931503)
chr8 (8-109)||(9596200-9596301)
chr8 (30-99)||(21653359-21653428)
chr8 (29-109)||(3183913-3183993)
chr8 (29-109)||(43599333-43599413)
chr8 (29-99)||(10989036-10989106)
chr8 (29-99)||(10989243-10989313)
chr8 (29-111)||(27402115-27402197)
chr8 (29-99)||(36997198-36997268)
chr8 (29-109)||(8559603-8559683)
chr8 (22-106)||(8605515-8605598)
chr8 (29-101)||(20298518-20298590)
chr8 (29-109)||(21085150-21085230)
chr8 (22-109)||(9595988-9596075)
chr8 (27-82)||(36993947-36994002)
chr8 (44-107)||(39587875-39587938)
chr8 (31-109)||(39588088-39588169)
chr8 (37-99)||(15011039-15011101)
chr8 (24-66)||(20232404-20232446)
chr8 (29-99)||(21653836-21653906)
chr8 (29-91)||(30176466-30176528)
chr8 (29-99)||(40902395-40902465)
chr8 (29-91)||(43984318-43984380)
chr8 (32-109)||(35561688-35561765)
chr8 (29-109)||(16454637-16454717)
chr8 (29-109)||(23027830-23027910)
[»] chr3 (55 HSPs)
chr3 (8-109)||(48511620-48511721)
chr3 (8-109)||(10450629-10450730)
chr3 (20-109)||(15820598-15820687)
chr3 (14-109)||(24453800-24453895)
chr3 (24-109)||(11244538-11244623)
chr3 (30-109)||(10453706-10453785)
chr3 (8-107)||(10856607-10856706)
chr3 (14-109)||(42190464-42190558)
chr3 (27-109)||(36020838-36020920)
chr3 (27-109)||(40769912-40769994)
chr3 (27-109)||(48511410-48511492)
chr3 (8-109)||(9178929-9179030)
chr3 (24-109)||(9180390-9180475)
chr3 (24-109)||(10450421-10450506)
chr3 (8-101)||(16051516-16051609)
chr3 (8-101)||(16060866-16060959)
chr3 (29-109)||(44573348-44573428)
chr3 (29-109)||(45443302-45443382)
chr3 (29-99)||(44573671-44573741)
chr3 (29-99)||(44573968-44574038)
chr3 (27-99)||(11414395-11414467)
chr3 (29-109)||(13769293-13769373)
chr3 (29-109)||(49477556-49477636)
chr3 (29-109)||(50203859-50203939)
chr3 (44-115)||(31563716-31563787)
chr3 (39-109)||(27219351-27219421)
chr3 (29-99)||(39078773-39078843)
chr3 (37-115)||(43101381-43101459)
chr3 (29-99)||(50692355-50692425)
chr3 (8-101)||(16045351-16045444)
chr3 (27-108)||(38300752-38300833)
chr3 (30-99)||(39956677-39956746)
chr3 (29-110)||(49477348-49477429)
chr3 (29-97)||(3985807-3985875)
chr3 (29-109)||(9264088-9264168)
chr3 (37-97)||(34715465-34715525)
chr3 (27-115)||(51338441-51338529)
chr3 (29-109)||(51642430-51642510)
chr3 (29-109)||(51642637-51642717)
chr3 (69-109)||(53966255-53966295)
chr3 (29-109)||(54369061-54369141)
chr3 (44-115)||(31564020-31564091)
chr3 (29-99)||(9264295-9264365)
chr3 (37-99)||(14170009-14170071)
chr3 (29-111)||(21750495-21750577)
chr3 (29-99)||(22339773-22339843)
chr3 (29-95)||(22407443-22407509)
chr3 (29-95)||(22407650-22407716)
chr3 (29-99)||(50692558-50692628)
chr3 (29-102)||(9179162-9179235)
chr3 (52-109)||(22666343-22666400)
chr3 (29-109)||(4029646-4029726)
chr3 (29-109)||(9264502-9264582)
chr3 (27-99)||(19820528-19820600)
chr3 (29-109)||(35011886-35011966)
[»] chr2 (45 HSPs)
chr2 (8-109)||(10862039-10862140)
chr2 (8-109)||(15962138-15962239)
chr2 (14-109)||(11350174-11350269)
chr2 (24-109)||(17325192-17325277)
chr2 (24-108)||(36161344-36161427)
chr2 (8-115)||(28193556-28193663)
chr2 (14-109)||(39420719-39420814)
chr2 (31-109)||(33532740-33532818)
chr2 (24-109)||(936834-936919)
chr2 (14-109)||(11349780-11349875)
chr2 (29-115)||(43195800-43195886)
chr2 (29-101)||(3976473-3976545)
chr2 (29-109)||(11969074-11969154)
chr2 (13-109)||(15961786-15961882)
chr2 (29-109)||(21214203-21214283)
chr2 (14-109)||(32810863-32810958)
chr2 (27-109)||(14280302-14280384)
chr2 (27-109)||(28193335-28193417)
chr2 (29-115)||(38760319-38760405)
chr2 (29-99)||(42768336-42768406)
chr2 (32-109)||(6183371-6183448)
chr2 (37-109)||(21213895-21213967)
chr2 (31-115)||(25441712-25441796)
chr2 (31-109)||(7877866-7877944)
chr2 (44-106)||(10861851-10861913)
chr2 (29-99)||(20998991-20999061)
chr2 (29-99)||(23054358-23054428)
chr2 (37-109)||(883611-883683)
chr2 (29-109)||(3977005-3977085)
chr2 (29-109)||(17727426-17727506)
chr2 (14-109)||(10862328-10862423)
chr2 (24-115)||(44266305-44266396)
chr2 (29-99)||(19860069-19860139)
chr2 (29-99)||(34775389-34775459)
chr2 (29-114)||(10849493-10849578)
chr2 (44-109)||(18901881-18901946)
chr2 (32-109)||(27545121-27545198)
chr2 (29-109)||(33985773-33985851)
chr2 (29-109)||(3435488-3435568)
chr2 (22-66)||(4505627-4505671)
chr2 (37-109)||(12431920-12431992)
chr2 (38-102)||(14288950-14289014)
chr2 (43-115)||(17509125-17509197)
chr2 (29-109)||(43169264-43169344)
chr2 (29-109)||(43688423-43688503)
[»] chr5 (45 HSPs)
chr5 (24-106)||(84031-84113)
chr5 (8-109)||(22196534-22196635)
chr5 (14-115)||(29396330-29396431)
chr5 (8-109)||(30329858-30329959)
chr5 (13-109)||(32395300-32395396)
chr5 (24-109)||(2471690-2471775)
chr5 (24-109)||(22196323-22196408)
chr5 (24-106)||(83808-83889)
chr5 (29-111)||(29432432-29432514)
chr5 (27-109)||(14769832-14769914)
chr5 (29-115)||(38663263-38663349)
chr5 (29-106)||(24994094-24994171)
chr5 (29-109)||(3762928-3763008)
chr5 (31-115)||(19439876-19439960)
chr5 (29-109)||(24918183-24918263)
chr5 (6-109)||(24792246-24792348)
chr5 (29-115)||(13843713-13843799)
chr5 (14-109)||(30330083-30330180)
chr5 (29-115)||(40169043-40169129)
chr5 (29-109)||(13413606-13413686)
chr5 (29-109)||(13844035-13844115)
chr5 (29-109)||(35526990-35527070)
chr5 (29-109)||(37995636-37995716)
chr5 (29-109)||(38131786-38131866)
chr5 (35-106)||(33040088-33040159)
chr5 (29-99)||(48106-48176)
chr5 (29-99)||(34457335-34457405)
chr5 (29-109)||(873698-873778)
chr5 (29-109)||(18541744-18541824)
chr5 (29-109)||(37656734-37656814)
chr5 (29-109)||(38376753-38376833)
chr5 (29-99)||(48313-48383)
chr5 (29-99)||(2716578-2716648)
chr5 (29-111)||(12965248-12965330)
chr5 (27-109)||(27760097-27760179)
chr5 (29-91)||(28156070-28156132)
chr5 (29-99)||(28358037-28358107)
chr5 (29-99)||(34457128-34457198)
chr5 (29-95)||(35527276-35527342)
chr5 (43-109)||(43490272-43490338)
chr5 (45-109)||(1028111-1028175)
chr5 (29-109)||(1892092-1892172)
chr5 (29-97)||(2908771-2908839)
chr5 (14-66)||(5095888-5095940)
chr5 (29-109)||(37781846-37781926)
[»] chr6 (28 HSPs)
chr6 (8-109)||(26842742-26842843)
chr6 (24-102)||(8427579-8427657)
chr6 (8-109)||(33396329-33396430)
chr6 (29-109)||(8144039-8144119)
chr6 (14-109)||(25184232-25184327)
chr6 (29-109)||(1744844-1744924)
chr6 (29-109)||(24055111-24055191)
chr6 (29-99)||(10733440-10733510)
chr6 (29-99)||(15101113-15101183)
chr6 (29-99)||(16877012-16877082)
chr6 (32-109)||(17096703-17096780)
chr6 (44-109)||(21067074-21067139)
chr6 (44-109)||(21088865-21088930)
chr6 (8-109)||(25184025-25184126)
chr6 (29-109)||(10418340-10418420)
chr6 (29-109)||(19712611-19712691)
chr6 (32-99)||(19054525-19054592)
chr6 (44-115)||(27443554-27443625)
chr6 (29-99)||(16876832-16876902)
chr6 (29-115)||(24558599-24558685)
chr6 (29-99)||(28149825-28149895)
chr6 (32-109)||(5269278-5269355)
chr6 (13-78)||(30718734-30718799)
chr6 (29-109)||(11313384-11313464)
chr6 (29-109)||(12134485-12134565)
chr6 (7-115)||(13673871-13673979)
chr6 (27-115)||(23591545-23591633)
chr6 (69-109)||(33396547-33396587)
[»] scaffold0785 (1 HSPs)
scaffold0785 (8-109)||(3101-3202)
[»] scaffold0012 (1 HSPs)
scaffold0012 (44-109)||(165806-165871)
[»] scaffold0166 (1 HSPs)
scaffold0166 (6-109)||(34629-34731)
[»] scaffold0029 (1 HSPs)
scaffold0029 (29-109)||(76874-76954)
[»] scaffold0003 (1 HSPs)
scaffold0003 (44-115)||(43736-43807)
[»] scaffold0434 (1 HSPs)
scaffold0434 (29-99)||(13338-13408)
[»] scaffold0054 (1 HSPs)
scaffold0054 (27-99)||(21263-21335)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 109 - 372
Target Start/End: Original strand, 52810985 - 52811244
Alignment:
Q  109 aactgatacttgaatcgattgaaattgggtttaattgatttggctcggttcgaacttgaacataaaaaatgaacctatttaatttgtttggattgaatct 208  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52810985 aactgatactcaaatcgattgaaattgggtttaattgatttggctcggttcgaacttgaacataaaaaatgaacctatt-aatttgtttggattgaatct 52811083  T
Q  209 ttgatttctacnnnnnnnnnnngagatctttgagttctaaatattatagtgtctatgtcatatattgtcttttaaaaattgaaatcgggtttaattgatt 308  Q
    |||| ||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52811084 ttgagttctacttttttttt---agatctttgagttctaaatattatagtgtctatgtcatatattgtcttttaaaaattgaaatcgggtttaattgatt 52811180  T
Q  309 tcattcggttgaaacataaaaaatgaacctatttaatttgtttggattgaatctttgagttcta 372  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52811181 tcatttggttggaacataaaaaatgaacctatttaatttgtttggattgaatctttgagttcta 52811244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 166 - 372
Target Start/End: Original strand, 52811192 - 52811395
Alignment:
Q  166 gaacataaaaaatgaacctatttaatttgtttggattgaatctttgatttctacnnnnnnnnnnngagatctttgagttctaaatattatagtgtctatg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||           |||||||||||||||||||||||||||||||||||    
T  52811192 gaacataaaaaatgaacctatttaatttgtttggattgaatctttgagttctactttttttt---gagatctttgagttctaaatattatagtgtctatg 52811288  T
Q  266 tcatatattgtcttttaaaaattgaaatcgggtttaattgatttcattcggttgaaacataaaaaatgaacctatttaatttgtttggattgaatctttg 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  52811289 tcatatattgtcttttaaaaattgaaatcgggtttaattgatttcattcggttggaacataaaaaacgaacctatttaatttgcttggattgaatctttg 52811388  T
Q  366 agttcta 372  Q
    |||||||    
T  52811389 agttcta 52811395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 52810833 - 52810927
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatc 102  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  52810833 ataccatgcaacggaaatcgaggtctaattcatccataaaaaaccggcttctacgatgagaagtgcctcctctttttgaactcttctcaagaatc 52810927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 46528920 - 46529005
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||| | |||||||||||||||||| |||||    
T  46528920 atcgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatcta 46529005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 11290292 - 11290191
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| | || ||||||||| ||||||||||||||||||||| ||||||||  | |||||||||||| | |||||||||||||| |||||||    
T  11290292 ataccatgttacgaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatc 11290193  T
Q  108 ta 109  Q
    ||    
T  11290192 ta 11290191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 33912166 - 33912065
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||  | |||||||||||| |||||| |||||||||||||| ||| ||||  |||||||||||||| | ||||||||||||| ||||||||    
T  33912166 ataccatgtaacaaatatcgaggcctaactcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaactcttctcaagtatcctatc 33912067  T
Q  108 ta 109  Q
    ||    
T  33912066 ta 33912065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 2016638 - 2016548
Alignment:
Q  25 tcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||||||| ||| |  ||||||| |||||| ||||||||  |||||||||||||| | |||||||||||||||||||||||| |||||    
T  2016638 tcgaggcctaactcaactctacaaaatcggcttatacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatctgat 2016548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 50868013 - 50868095
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | ||||||||||||||||||||| ||||||||  | |||||||||||| | |||||||||||||| |||||||||    
T  50868013 gaggcctgactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatcta 50868095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 52810612 - 52810707
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||||||| ||| ||||||||| |||| |  ||| ||||||||  |||| ||||||||| | ||||||||||||||||| ||||||    
T  52810612 tgtaacggaaatcgaggcttaactcatccatataaaatcaacttgtacggtgaggagtgtctcctctttataaactcttctcaagaatcttatcta 52810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 15665257 - 15665175
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| |||||| |||||||||||||| || |||||  |||||||||||| | | |||||||||||||| |||||||||    
T  15665257 gaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatcta 15665175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 37097726 - 37097819
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||||| ||||||| |||||| ||||||||| |||| ||| ||||  |||| ||||||||| | || ||||||||||||||||||||| |||||    
T  37097726 aaatcgtggcctaactcatccttacaaaacccgcttgtacagtgaggagtgtctcctctttataaaatcttctcaagaatcctatctatctgat 37097819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 52811343 - 52811396
Alignment:
Q  166 gaacataaaaaatgaacctatttaatttgtttggattgaatctttgatttctac 219  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  52811343 gaacataaaaaacgaacctatttaatttgcttggattgaatctttgagttctac 52811396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 29669365 - 29669445
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  29669365 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 29669445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 43972457 - 43972377
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||| ||||||||| |||||||||    
T  43972457 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatcta 43972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 51469583 - 51469503
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||| ||||||||| || |||||  |||||||||||||| | |||||||||||||| |||||||||    
T  51469583 ggcctaactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatcta 51469503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 53740284 - 53740204
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  53740284 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 53740204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 29669688 - 29669766
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | ||||||| |||||    
T  29669688 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgat 29669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 45427254 - 45427324
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||    
T  45427254 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 45427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 5488471 - 5488399
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  5488471 gaggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 5488399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 22867170 - 22867106
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||| || |||||  |||||||||||||| | |||||||||||||| |||||||||    
T  22867170 acaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatcta 22867106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 23018572 - 23018492
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  23018572 ggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtcatatcta 23018492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 27048412 - 27048492
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||  |||||||||||    
T  27048412 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatctaac 27048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 43943775 - 43943695
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  43943775 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 43943695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 45426938 - 45427018
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||| ||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  45426938 ggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 45427018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 51470585 - 51470505
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  || |||||||| || | |||||||||||||| |||||||||    
T  51470585 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatcta 51470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 52827242 - 52827314
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| |||||||||    
T  52827242 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatcta 52827314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 56509711 - 56509631
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || | |||  |||||||||||||| | |||||||||||||  |||||||||    
T  56509711 ggcctaactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatcta 56509631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 990649 - 990579
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||| ||| || |||||  |||||||||||||| | ||||||||||||||    
T  990649 ggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 990579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 12016685 - 12016755
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  12016685 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 12016755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 12016893 - 12016963
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  12016893 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 12016963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 29113551 - 29113465
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||| ||||||||| |||| || |||||  | |||||||||||| | |||||||||||||| || |||||| |||||    
T  29113551 ggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgat 29113465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 48843019 - 48843105
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| | |||| || ||||||||||| || |||||  |||||||||||||| | ||||||| |||||| ||||||||| |||||    
T  48843019 ggcctaactaatccctaaaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtcctatctatctgat 48843105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 52214717 - 52214647
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| ||||||    
T  52214717 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaaga 52214647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 26941964 - 26941883
Alignment:
Q  28 aggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||  ||||| |||||||||||||| |||| |||  |||||||||||| | | ||||||||||||| || |||||||    
T  26941964 aggcctaacccatccttacaaaaccggcttgtacgatgaggagtgcctcctctatataaactcttctcaaggatactatcta 26941883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 27634328 - 27634408
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||| |||||| || ||||| || |||||||||||| |  ||||||||||||| || ||||||    
T  27634328 ggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatcta 27634408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 29734655 - 29734583
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  ||||||||||||||   |||||||||||| | |||||||||    
T  29734655 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttaataactcttctcaaaagtcctatcta 29734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 35269113 - 35269033
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||| | |||| || |||||  ||||| |||||||| | ||||||||||||||||| ||||||    
T  35269113 ggcctaactcatccttacaaaatcagcttgtaaggtgaggagtgcttcctctttataaactcttctcaagaatcttatcta 35269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 52811382 - 52811434
Alignment:
Q  234 atctttgagttctaaatattatagtgtctatgtcatatattgtcttttaaaaa 286  Q
    |||||||||||||| ||||||||||| |||| ||||||||| |||| ||||||    
T  52811382 atctttgagttctacatattatagtgcctatatcatatattttcttgtaaaaa 52811434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 53738210 - 53738290
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||| ||||| || |||||  |||| ||||||||| | |||||||||||||| || ||||||    
T  53738210 ggcctaagtcatccttacaaaactggcttgtaaggtgacgagtgtctcctctttataaactcttctcaagagtcttatcta 53738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 53739968 - 53739888
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || | |||  ||| |||||||||| | |||||||||||||| | |||||||    
T  53739968 ggcctaaatcatccttacaaaaccggcttgtaagctgaggagttcctcctctttataaactcttctcaagagtactatcta 53739888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 991303 - 991236
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||| |||||| |||||||||||||| || |||||  ||||||||||| || | ||||||||||||||    
T  991303 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaaga 991236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 28085781 - 28085714
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||  |||||||||||    
T  28085781 tacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcgtcctatctaac 28085714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 21497685 - 21497747
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactct 91  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||    
T  21497685 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21497747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 21498289 - 21498227
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactct 91  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||    
T  21498289 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 37288886 - 37288951
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||| ||| |||| ||||| ||| | ||||||||||||||||| ||||||    
T  37288886 tacaaaatcggcttgtacggcgaagagtgtctcctttttataaactcttctcaagaatcatatcta 37288951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 13254485 - 13254405
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||| | ||||||||||| || || |||||  |||||||| ||||| | |||||||||||| | |||||||||    
T  13254485 ggcctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactcttctcaatagtcctatcta 13254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 25753609 - 25753677
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||| ||||||    
T  25753609 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaaga 25753677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 36558468 - 36558536
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaa 97  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||| | |||||| | ||||||||||||    
T  36558468 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaa 36558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 43972121 - 43972061
Alignment:
Q  49 aaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| || |||||  |||| ||||||||| | |||||||||||||| |||||||||    
T  43972121 aaccggcttgtaaggtgaggagtgtctcctctttatcaactcttctcaagagtcctatcta 43972061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 49380746 - 49380682
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  49380746 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 49380682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 49380898 - 49380962
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 49380962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 50858114 - 50858034
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  ||| |||| ||||| | || ||||||||||| | |||||||    
T  50858114 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtacctcttctttataaaatcttctcaagagtactatcta 50858034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 56511399 - 56511319
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||| |  || |||||  |||||||||||||| | ||||||| |||||| || ||||||    
T  56511399 ggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatcta 56511319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 17295098 - 17295000
Alignment:
Q  11 ccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  17295098 ccatgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 17295000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 29228571 - 29228470
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||||||||||||| |||||||    
T  29228571 ataccatgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatc 29228472  T
Q  108 ta 109  Q
    ||    
T  29228471 ta 29228470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 45858778 - 45858677
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | || ||||||||| |||||| || ||||||| ||| ||||||||  |||||||||||||| | ||||||||||||||||||||||    
T  45858778 ataccatgtaacgaatattgaggcctaactcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc 45858679  T
Q  108 ta 109  Q
    ||    
T  45858678 ta 45858677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 51722364 - 51722275
Alignment:
Q  21 gaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctct-ttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||| || | ||||||||||||||||||||||||    
T  51722364 gaaatcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctcttataaactcttctcaagaatcctatcta 51722275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 28509389 - 28509469
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| ||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  28509389 ggcctaactcatccttacaaaaccggcttgtacggtggagagtgcctcctctttataaactcttctcaagaatcctatcta 28509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 27958057 - 27958129
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  27958057 tcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 27958129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 29228793 - 29228697
Alignment:
Q  13 atgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||| | |||||||||||| |||||| |||||| ||||||| ||| ||||  |||||||||||||| | |||||||||||||| |||||||||    
T  29228793 atgtaacgaatatcgaggcctaactcatccctacaaatccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatcta 29228697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 31411539 - 31411648
Alignment:
Q  10 accatgtaacggaaatcgaggcctaatt----catccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatccta 105  Q
    ||||||||||| | |||||||||||| |    |||||||||||||||||||| |||||||| | ||||||||| ||| | ||||||| ||||||||||||    
T  31411539 accatgtaacgaatatcgaggcctaacttatccatccatacaaaaccggcttgtacggtgagatgtgcctcctttttataaactcttttcaagaatccta 31411638  T
Q  106 tctaactgat 115  Q
    |||| |||||    
T  31411639 tctatctgat 31411648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 12287965 - 12287870
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| |||||| ||||||||| |||| ||||||||  |||||||||||||| | | ||||| ||||||||||||||||    
T  12287965 tgtaacgaatatcgaggcctaactcatccttacaaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatcta 12287870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 4187511 - 4187595
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||  ||||||||||| || | |||||||||||||| |||||||||    
T  4187511 atcgaggcgtaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctc-ttataaactcttctcaagattcctatcta 4187595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 38474386 - 38474305
Alignment:
Q  28 aggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| ||||||||||||||||    
T  38474386 aggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatcta 38474305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 18585147 - 18585060
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||||| |||||| |||||||| ||||| ||||||||  ||| |||||||||| | || |||||||||||||||||||||    
T  18585147 aaatcggggcctaactcatccttacaaaactggcttgtacggtgaggagtccctcctctttataaaatcttctcaagaatcctatcta 18585060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 19937046 - 19937125
Alignment:
Q  30 gcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||||| |||||||    
T  19937046 gcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatcta 19937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 33562114 - 33562209
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | ||| |||||||| ||||||  ||||||||||||| ||||||||  |||||||||||||| | | ||||| ||||||||||||||||    
T  33562114 tgtaacgaatatcaaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatcta 33562209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 45443327 - 45443242
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| | | || |||||||||||||| |||||| |  |||||||| ||||| | ||||||||||||||||||||||||    
T  45443327 atcgaggcctaactgaaccttacaaaaccggcttgtacggttaggagtgcctcatctttataaactcttctcaagaatcctatcta 45443242  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 4022127 - 4022207
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||| ||||| || |||||  |||||||||||||| | |||||||||||||| |||||||||    
T  4022127 ggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatcta 4022207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 31305812 - 31305733
Alignment:
Q  30 gcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  31305812 gcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 31305733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 20735624 - 20735538
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | || ||||||||||| | ||||||| |||||    
T  20735624 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagtactatctatctgat 20735538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 2697348 - 2697413
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| |||||||||    
T  2697348 tacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatcta 2697413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 17419886 - 17419809
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  17419886 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 17419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 29383618 - 29383705
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||||| |||||| |||||||| ||||| |||||| |  ||||||||| |||| | ||||||||||||| ||| ||||||    
T  29383618 aaatcggggcctaactcatccttacaaaactggcttgtacggtaaggagtgcctccgctttataaactcttctcaagtatcttatcta 29383705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 36332214 - 36332136
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||| |||||||| | |||||||  |||||||||||||    
T  36332214 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcatcctctttataaactcttaacaagaatcctatc 36332136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 40521474 - 40521575
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcc-tctttttgaactcttctcaagaatcctat 106  Q
    ||||||||||||| | |||||||| ||| |||| | |||||| |||| || ||||||||| |||| |||| ||||| | ||||||||||||||||| |||    
T  40521474 ataccatgtaacgaatatcgaggcttaactcattcttacaaa-ccggtttgtacggtgaagagtgtctccctctttataaactcttctcaagaatcttat 40521572  T
Q  107 cta 109  Q
    |||    
T  40521573 cta 40521575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 43423381 - 43423311
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||| ||||| || |||||  |||||||||||||| | ||||||||||||||    
T  43423381 ggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 43423311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 45403544 - 45403474
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaa 97  Q
    ||||||||| |||||| ||||||||| |||| || |||||  |||||||||||||| | ||||||||||||    
T  45403544 gaggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaa 45403474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 27957814 - 27957891
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||||| ||||||||  || | ||||||||| | |||| ||||||||||||| |||||    
T  27957814 ctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaacttttctcaagaatcccatcta 27957891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 36326998 - 36326929
Alignment:
Q  39 atccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatct 108  Q
    |||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | ||||||    
T  36326998 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatct 36326929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 40642773 - 40642858
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| ||||||  |||||| |||| ||||||||| | | ||||  |||| ||||||||| | ||||||||||||||||||||||||    
T  40642773 atcggggcctagctcatccttacagaaccggcttttgctgtgaggagtgtctcctctttataaactcttctcaagaatcctatcta 40642858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 40664303 - 40664230
Alignment:
Q  38 catccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||| |||||||||||||| || || ||  |||||||||||||| | ||||||| |||||| |||||||||||    
T  40664303 catccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactcttatcaagagtcctatctaac 40664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 20735859 - 20735771
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||| ||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||| ||| ||| || |||||| |||||    
T  20735859 gaggcttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctactcgagagtcttatctatctgat 20735771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 29413458 - 29413370
Alignment:
Q  21 gaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| ||||||| |||||| |||||||| ||||  || |||||  |||||||||||||| | ||||||| |||||| || ||||||    
T  29413458 gaaatcggggcctaactcatccttacaaaactggctcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatcta 29413370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 39649094 - 39649166
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  39649094 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 39649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 31789451 - 31789373
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatct 108  Q
    |||||||||||||| |||||||||||||| || ||||| | |||||  |||||| | ||||||| |||||| ||||||||    
T  31789451 ggcctaattcatccttacaaaaccggcttgtaaggtgagaggtgcc-actctttataaactcttatcaagagtcctatct 31789373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 43361557 - 43361624
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  43361557 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 43361624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 2104262 - 2104344
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||||||||||||   ||||||  |||||  |||||||||||    
T  2104262 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttacaaactctgatcaagcttcctatctaac 2104344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 29273227 - 29273297
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | ||||||| |||| | ||||||||||||||    
T  29273227 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcccctttataaactcttctcaaga 29273297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 30604464 - 30604542
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||| ||||||||||||||||||||| || | | |  |||| ||||||||| | |||| ||||||||| |||||||||    
T  30604464 cctaactcatccatacaaaaccggcttgtaagataaggagtgtctcctctttataaactattctcaagattcctatcta 30604542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 33879780 - 33879850
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| ||||||||| |||| || |||||  |||| ||||||||| | ||||||||||||||    
T  33879780 ggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaaga 33879850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 33964475 - 33964405
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| ||||||||| |||| || |||||  |||| ||||||||| | ||||||||||||||    
T  33964475 ggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaaga 33964405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 35024249 - 35024331
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    |||||||  ||||| |||||||||||| | || |||||  |||||||||| ||| | ||||||| |||||| |||||||||||    
T  35024249 ggcctaacccatccttacaaaaccggcctgtaaggtgaggagtgcctcctgtttataaactcttatcaagagtcctatctaac 35024331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 37600966 - 37600904
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||||| |||||||||||||| || |||||  |||||| ||||||| | ||||||||||||||    
T  37600966 tcatccttacaaaaccggcttataaggtgaggagtgccgcctctttataaactcttctcaaga 37600904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 8520110 - 8520175
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| || |||||  |||||||| ||||| | |||||||||||||| | |||||||    
T  8520110 tacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatcta 8520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 12233377 - 12233304
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaa 110  Q
    |||||| || ||||||||||| || |||||  ||| |||||||||| | |||||||||||||| || |||||||    
T  12233377 tcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaactcttctcaagagtcgtatctaa 12233304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 13959504 - 13959424
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| || |||||| |||| || |||||||| ||  |||||||| | |||||||||||||| || ||||||    
T  13959504 ggcctaactcatccttaaaaaaccagcttgtaaggtgaaaattgtatcctctttataaactcttctcaagagtcttatcta 13959424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 15392127 - 15392047
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| ||  ||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  15392127 ggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatcta 15392047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 52846859 - 52846931
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  52846859 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 52846931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 36495789 - 36495688
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    |||||||| |||| | |||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||| | |||| |||||||||||||||||    
T  36495789 ataccatgaaacgaatatcgaggcctaactcatccctacaaaaccggcttctacggtgaggagtgcctcctctttataaactattctcaagaatcctatc 36495690  T
Q  108 ta 109  Q
    ||    
T  36495689 ta 36495688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 47346304 - 47346404
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||||||||||||| |||||||    
T  47346304 ataccatgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatc 47346403  T
Q  108 t 108  Q
    |    
T  47346404 t 47346404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 47346081 - 47346182
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactg 113  Q
    ||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||||||||||||| ||||||||| |||    
T  47346081 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatctg 47346180  T
Q  114 at 115  Q
    ||    
T  47346181 at 47346182  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 33909260 - 33909159
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||| | | |||||||||||| ||||||||||||||||||||| ||| ||||  ||||  |||||||| | ||||||||||||||||||||||    
T  33909260 ataccatgtaaagaatatcgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtatcctctttataaactcttctcaagaatcctatc 33909161  T
Q  108 ta 109  Q
    ||    
T  33909160 ta 33909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 37756162 - 37756246
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||||    
T  37756162 atcgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatcta 37756246  T

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Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 27585373 - 27585278
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||| ||||| |||||| |||||||||||||| ||||||||  |||||||||| ||| | ||||||||||||||||||||||||    
T  27585373 tgtaacgaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatcta 27585278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 34914907 - 34915002
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  |||||||| ||||| | ||||||||||||||||||| ||||    
T  34914907 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcatctttgtaaactcttctcaagaatcctgtcta 34915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 36496006 - 36495911
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | || ||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||| |||||||||||||||||||    
T  36496006 tgtaacgaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagaatcctatcta 36495911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 37755939 - 37756020
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||||    
T  37755939 gaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatcta 37756020  T

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Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 37761913 - 37761994
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||||    
T  37761913 gaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatcta 37761994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 34748885 - 34748800
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||| |||||| |||||||||||||| ||||||||  | |||||||||||| | ||||||||||||||||||||||||    
T  34748885 atcgaggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatcta 34748800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 36270678 - 36270779
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||  | |||||||||||| |||||| |||||||||||||| ||| ||||  |||||||||||||| | ||||| | ||||||||||||||    
T  36270678 ataccatgtaacaaatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcctgtcaagaatcctatc 36270777  T
Q  108 ta 109  Q
    ||    
T  36270778 ta 36270779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 43384282 - 43384362
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||||||||||||    
T  43384282 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 43384362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 36270457 - 36270552
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| |||||| |||||| ||||||| ||||||||  |||| ||||||||| | ||||| ||||||||||||||||||    
T  36270457 tgtaacgaatatcgaggcctaactcatccttacaaagccggcttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatcta 36270552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 14991506 - 14991591
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||| |||||| ||||||| || ||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  14991506 atcgagacctaactcatccttacaaaatcgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 14991591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 15421117 - 15421202
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||| |||||| ||||||| || ||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  15421117 atcgagacctaactcatccttacaaaatcgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 15421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 19843606 - 19843506
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| || || |||||||| |||||| ||||||| |||||| ||||||||  ||||||||||| |||  |||||||||||| |||||||||    
T  19843606 ataccatgtaacgaaagtcaaggcctaactcatccttacaaaatcggcttgtacggtgaggagtgcctcctc-tttaaaactcttctcaataatcctatc 19843508  T
Q  108 ta 109  Q
    ||    
T  19843507 ta 19843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 39549983 - 39550060
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||| ||||| ||| ||||  |||||||||||||| | ||||||||||||||||||||||||    
T  39549983 ctaactcatccttacaaaactggcttgtacagtgatgagtgcctcctctttataaactcttctcaagaatcctatcta 39550060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 7135245 - 7135325
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||  |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| |||||||||    
T  7135245 ggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatcta 7135325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 33909410 - 33909338
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||||| ||||||||||||||||||||| ||| ||||  |||| ||||||||| | ||||||||||||||    
T  33909410 gaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttataaactcttctcaaga 33909338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 37272050 - 37272129
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    |||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| |||||||||||    
T  37272050 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaac 37272129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 37530926 - 37531005
Alignment:
Q  30 gcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||| | |||||||||||| || | |||  |||||||||||||| | ||||||||||||||||||||||||    
T  37530926 gcctaactcatccttgcaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagaatcctatcta 37531005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 1663606 - 1663687
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttt-tgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||||||||||||| | |||||||||||||| | |||||||    
T  1663606 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatcta 1663687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 28910131 - 28910054
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||| ||||| |||||||||    
T  28910131 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttcccaagagtcctatcta 28910054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 36092604 - 36092681
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| ||||||||| |||| || |||||  |||||||||||| | | ||||||||||||||||||||||||    
T  36092604 ctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatcta 36092681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 257269 - 257341
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||| |||||| |||||||||||||  || |||||  |||||||||||||| | ||||||||||||||||    
T  257269 ggcctaactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaat 257341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 6783140 - 6783060
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  6783140 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 6783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 36092394 - 36092474
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  ||| |||||||| | | ||||||||||||||||| ||||||    
T  36092394 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtacctcctctctataaactcttctcaagaatcatatcta 36092474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 19843806 - 19843723
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||| |||||| ||||||| || ||| ||||||||  ||||| | |||||| | |||||||||||||||||||||||| |||||    
T  19843806 ctaactcatccttacaaaatcgtcttgtacggtgaggagtgctttctctttataaactcttctcaagaatcctatctatctgat 19843723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 20296368 - 20296285
Alignment:
Q  26 cgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||| | ||||||| ||||||||||| || || ||  |||| ||||||||| | ||||||||||||||||||| ||||    
T  20296368 cgaggcctaacttatccatataaaaccggcttgtatggcgaggagtgtctcctctttataaactcttctcaagaatcctctcta 20296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 22206273 - 22206360
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| |  ||| ||||||| ||| || || |||||  |||||||||||||| | |||| |||||||||||||||||||    
T  22206273 aaatcgaggcctaactggtccctacaaaatcggtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatcta 22206360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 22228466 - 22228379
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| |  ||| ||||||| ||| || || |||||  |||||||||||||| | |||| |||||||||||||||||||    
T  22228466 aaatcgaggcctaactggtccctacaaaatcggtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatcta 22228379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 1661193 - 1661263
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||| | |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||    
T  1661193 ggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 1661263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 24240387 - 24240445
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtga 66  Q
    ||||||||||||| | ||| |||||||| |||||| |||||||||||||| ||||||||    
T  24240387 ataccatgtaacgaacatcaaggcctaactcatccgtacaaaaccggcttgtacggtga 24240445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 22686728 - 22686812
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtg--cctcctctttttgaactcttctcaagaatcctat 106  Q
    |||| |||||||||||||| ||||||||| |||| ||||||||  ||||   ||||||||| | ||||||| |||||||||||||    
T  22686728 atcggggcctaattcatccctacaaaaccagcttgtacggtgaggagtgtctctcctctttataaactcttttcaagaatcctat 22686812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 36492545 - 36492625
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||| |||||||| |||||||| ||||| || |||||  |||||||||||||| | |||| || |||||| |||||||||    
T  36492545 ggccttattcatccttacaaaactggcttttaaggtgaggagtgcctcctctttataaacttttatcaagagtcctatcta 36492625  T

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Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 40121628 - 40121700
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  |||||||||||| | | |||||||||||||| | |||||||    
T  40121628 tcatccttacaaaaccggcttgtagggtgaggagtgcctcctctctataaactcttctcaagagtactatcta 40121700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 39808466 - 39808536
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| ||||||  ||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  39808466 ggcctaactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaactcttctcaaga 39808536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 43288366 - 43288284
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| ||| || ||||||||||| || || | |||  |||||||||||||| | ||||||| |||||| |||||||||||    
T  43288366 ggcctaactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttatcaagagtcctatctaac 43288284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 43288634 - 43288564
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| | |||| |||||||||||||| || |||||  |||||||||||||| | ||||||| ||||||    
T  43288634 ggcctaactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaaga 43288564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 44314311 - 44314353
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtga 66  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||    
T  44314311 atcgaggcctaactcatctatacaaaaccggcttgtacggtga 44314353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 27729471 - 27729556
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||| |||||| ||||||| |||||| ||||||||  | ||| || ||||| | |||||||| ||| |||||||||||    
T  27729471 atcgagacctaactcatccttacaaaatcggcttgtacggtgaggattgcatcatctttataaactcttcccaataatcctatcta 27729556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 31374864 - 31374799
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaa 97  Q
    |||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||    
T  31374864 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaa 31374799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 36237896 - 36237827
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    |||||| |||||||||||||| || || ||  |||||||||||||| | ||||||| |||||| ||||||    
T  36237896 tcatccttacaaaaccggcttgtaaggagaggagtgcctcctctttataaactcttatcaagagtcctat 36237827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 6782912 - 6782848
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  6782912 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 6782848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 6959978 - 6960050
Alignment:
Q  39 atccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    |||| |||||| || |||| || |||||| ||||||||||| || | ||||||| |||||| |||||||||||    
T  6959978 atccttacaaacccagcttgtaaggtgaagagtgcctcctcgttataaactcttatcaagagtcctatctaac 6960050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 23396711 - 23396631
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||| ||||| |  ||||||||||||| || ||||||    
T  23396711 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatcta 23396631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 29252662 - 29252598
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  29252662 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 29252598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 29780249 - 29780169
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| || ||||||| ||| || |||||  |||| ||||||||| | |||||||||||||| || ||||||    
T  29780249 ggcctaactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtcatatcta 29780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 40121957 - 40122021
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||| || |||||  |||| ||||||||| | |||||||||||||| | |||||||    
T  40121957 acaaaaccggcttgtagggtgaggagtgtctcctctttataaactcttctcaagagtactatcta 40122021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 41670677 - 41670605
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||||||| | || || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  41670677 tcatccttacaaaaccagtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 41670605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 43167903 - 43167975
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||  || |||||  | |||||||||||| | |||||||||||||| | |||||||    
T  43167903 tcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatcta 43167975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 17607195 - 17607296
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | |||||||||||| |||||| |||||||| ||||| ||||||||  |||||||||||||| | |||||||| |||||||||||||    
T  17607195 ataccatgtaacgaatatcgaggcctaactcatccttacaaaactggcttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatc 17607294  T
Q  108 ta 109  Q
    ||    
T  17607295 ta 17607296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 35908801 - 35908700
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  ||||||| |||||| | ||||||||||||| ||||||||    
T  35908801 ataccatgtaacgaatatcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatc 35908702  T
Q  108 ta 109  Q
    ||    
T  35908701 ta 35908700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 15711603 - 15711518
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| |||||| || ||||| ||||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  15711603 atcgaggcctaactcatccctataaaacaggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 15711518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 14019913 - 14019830
Alignment:
Q  26 cgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| ||||| |||||| |||||||||||||| | ||||||  |||||||||||||| | ||||||||||||||| ||||||||    
T  14019913 cgagacctaactcatccttacaaaaccggcttgttcggtgaggagtgcctcctctttataaactcttctcaagaaacctatcta 14019830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 18464176 - 18464086
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||||||||||| || ||| |||||| ||||||| ||||||||  ||||||| |||||| | |||||||||||||||||||||||| |||||    
T  18464176 atcgaggcctaactcgtccctacaaa-ccggcttgtacggtgaggagtgccttctctttataaactcttctcaagaatcctatctatctgat 18464086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 34248179 - 34248097
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| |||||||||||    
T  34248179 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaac 34248097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 34248461 - 34248379
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| |||||||||||    
T  34248461 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaac 34248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 8276636 - 8276571
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| ||| |||| ||||| ||||||||| | ||||||||||||||||||||||||    
T  8276636 tacaaaaccggcttgtacagtgagaagtgtctcctctttataaactcttctcaagaatcctatcta 8276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 38287961 - 38288046
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||| |||||| ||||||||| |||| ||||||||  |||| ||||||||| | |||||||||||| |||||||||||    
T  38287961 atcgagacctaactcatccttacaaaaccagcttgtacggtgagtagtgtctcctctttataaactcttctcaaaaatcctatcta 38288046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 18905958 - 18905878
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  18905958 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 18905878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 32931503 - 32931431
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||||    
T  32931503 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaat 32931431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 9596200 - 9596301
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| |||||||||||||| |||||  || ||||| ||||| ||| ||||  ||||| | |||||| | ||||||||||||||||| ||||    
T  9596200 ataccatgtcacgaaaatcgaggcctaactcatctttaaaaaactggcttgtacagtgaggagtgcattctctttataaactcttctcaagaatcttatc 9596299  T
Q  108 ta 109  Q
    ||    
T  9596300 ta 9596301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 21653428 - 21653359
Alignment:
Q  30 gcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||||| |||||| |||||||||||||| || ||||| ||||||||||||| | | ||||||||||||||    
T  21653428 gcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaaga 21653359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 3183913 - 3183993
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||  |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| |||||||||    
T  3183913 ggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcctatcta 3183993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 43599413 - 43599333
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  43599413 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 43599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 10989036 - 10989106
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  10989036 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 10989106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 10989243 - 10989313
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  10989243 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 10989313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 27402115 - 27402197
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    |||||||||||||| ||||| ||| |||| || ||||| ||||||||||||||| | ||||| | |||||| || ||||||||    
T  27402115 ggcctaattcatccttacaagacctgcttataaggtgagaagtgcctcctctttataaactcctatcaagagtcatatctaac 27402197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 36997268 - 36997198
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| ||||||    
T  36997268 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaaga 36997198  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 8559683 - 8559603
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  8559683 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 8559603  T

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Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 8605598 - 8605515
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    |||||| || |||| |||||| || ||||||||||| ||| ||||  |||||||||||| | | |||||||||||||||||||||    
T  8605598 aaatcggggtctaactcatcctta-aaaaccggcttgtacagtgaggagtgcctcctctatataaactcttctcaagaatcctat 8605515  T

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Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 20298518 - 20298590
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||| |||||  ||||||||| |||| || |||||  |||||||||||||| | ||||||||||||||||    
T  20298518 ggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaat 20298590  T

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Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 21085150 - 21085230
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||  ||||||||| |||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  21085150 ggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 21085230  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 9595988 - 9596075
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| || |||| |||||| |||||| ||| ||| ||| ||||  |||||||||||||| | || | |||||||||||||||||||    
T  9595988 aaatcggggtctaactcatccttacaaagccgacttgtactgtgaggagtgcctcctctttataaaatattctcaagaatcctatcta 9596075  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 36993947 - 36994002
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctcttt 82  Q
    ||||||||| |||||| |||||||||||||| || |||||  ||||||||||||||    
T  36993947 gaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttt 36994002  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 39587875 - 39587938
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    |||||||||||||| || |||||  ||||| |||||||| | |||||||||| |||||||||||    
T  39587875 tacaaaaccggcttataaggtgaggagtgcttcctctttataaactcttctctagaatcctatc 39587938  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 39588088 - 39588169
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttga---actcttctcaagaatcctatcta 109  Q
    ||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |   ||||||||||| |||||||||||    
T  39588088 cctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctctttataaactactcttctcaaaaatcctatcta 39588169  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15011039 - 15011101
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  15011039 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 15011101  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 20232404 - 20232446
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtga 66  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||    
T  20232404 atcgaggcctaactcatctatacaaaaccggcttgtacggtga 20232446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 21653906 - 21653836
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||| | | |||| |||||||||    
T  21653906 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaaga 21653836  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 30176466 - 30176528
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactct 91  Q
    ||||||| |||||| |||||||||||||| |  |||||| |||||||||||||| | ||||||    
T  30176466 ggcctaactcatccttacaaaaccggcttgtgaggtgaagagtgcctcctctttataaactct 30176528  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 40902395 - 40902465
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| | |||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  40902395 ggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 40902465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 43984318 - 43984380
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactct 91  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||    
T  43984318 ggcctaactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactct 43984380  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 35561765 - 35561688
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||| |  | |||||  | |||||||||||| | ||||||||||||||||| ||||||    
T  35561765 ctaactcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatcta 35561688  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 16454637 - 16454717
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  |||||||| |||| || ||||||    
T  16454637 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttcttaagagtcttatcta 16454717  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 23027830 - 23027910
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||| | || ||||||||||| || |||||  |||||||||||||| | | |||||||||||| | |||||||    
T  23027830 ggcctaactcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataagctcttctcaagagttctatcta 23027910  T

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Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 48511620 - 48511721
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| | || ||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||| | |||||||||||||| |||||||    
T  48511620 ataccatgtcacgaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatc 48511719  T
Q  108 ta 109  Q
    ||    
T  48511720 ta 48511721  T

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Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 10450629 - 10450730
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| | |||||||||||| ||||||  ||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||| ||||||    
T  10450629 ataccatgttacgaatatcgaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatc 10450728  T
Q  108 ta 109  Q
    ||    
T  10450729 ta 10450730  T

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Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 15820598 - 15820687
Alignment:
Q  20 ggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||  |||| |||||| || | ||||||||||||||||||||||||    
T  15820598 ggaaatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatcta 15820687  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 24453895 - 24453800
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||| ||| | ||||||||||||||| ||||||||    
T  24453895 tgtaacgaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctgtttataaactcttctcaagaaccctatcta 24453800  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 11244538 - 11244623
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||| ||||||||    
T  11244538 atcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatcta 11244623  T

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Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 10453706 - 10453785
Alignment:
Q  30 gcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||| ||||||||||||||||||||    
T  10453706 gcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaacccttctcaagaatcctatcta 10453785  T

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Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 10856607 - 10856706
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| | |||||||||||| |||||| |||||||||||||| ||  || |  |||||||||||||| | ||||||| ||||||||||||||    
T  10856607 ataccatgtcacgaatatcgaggcctaactcatccttacaaaaccggcttgtatagtaaggagtgcctcctctttataaactcttttcaagaatcctatc 10856706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 42190464 - 42190558
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| ||||||||| |||| ||| || ||||||||| ||||||||||| || | |||||||||||||| |||||||||    
T  42190464 tgtaacgaatatcgaggcctaactcatccatataaaatcggtttgtacggtgaagagtgcctcctc-ttataaactcttctcaagattcctatcta 42190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 36020920 - 36020838
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| |||||||||||||| |||||| |||||| |  |||||||||||||| | |||||||||||| |||| ||||||    
T  36020920 gaggcctaactcatccatacaaaatcggcttgtacggtaatgagtgcctcctctttataaactcttctcaaaaatcatatcta 36020838  T

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Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 40769912 - 40769994
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| ||||||||||||||||||||| ||| ||||  |||| ||||||||| |||||||||| ||| |||| ||||||    
T  40769912 gaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttatgaactcttcacaataatcatatcta 40769994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 48511410 - 48511492
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| ||||| | ||||||||||||| ||||||||  | |||||||||||| | |||||||||||||| |||||||||    
T  48511410 gaggcctaactcatctagacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatcta 48511492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 9179030 - 9178929
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||  || ||||||| ||| |||||| | |||||| ||||| || |||||| |||| ||||||||| | ||||||||| ||||||||||||    
T  9179030 ataccatgtaacaaaattcgaggcttaactcatccttccaaaactggcttgtaaggtgaagagtgtctcctctttataaactcttcttaagaatcctatc 9178931  T
Q  108 ta 109  Q
    ||    
T  9178930 ta 9178929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 9180475 - 9180390
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| | |||| ||||||||| |||| ||||||||  |||| ||||||||| | |||| |||||||||||||||||||    
T  9180475 atcgaggcctaactgatccttacaaaaccagcttgtacggtgaggagtgtctcctctttataaacttttctcaagaatcctatcta 9180390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 10450421 - 10450506
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| ||||||  |||||||| |||| ||||||||  ||||||||||| || | ||||||||||||||| ||||||||    
T  10450421 atcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctcgttataaactcttctcaagaaacctatcta 10450506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16051516 - 16051609
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||||||| | | |||||| ||||| |||||| |||||||||||||| ||||||||| | || ||| ||||| | ||||||||||||||||    
T  16051516 ataccatgtaatgaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaagaatgtctcatctttataaactcttctcaagaat 16051609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16060866 - 16060959
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||||||| | | |||||| ||||| |||||| ||||||||| |||| ||||||||| |||| ||| ||||| | ||||||||||||||||    
T  16060866 ataccatgtaatgaatatcgagacctaactcatccttacaaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaat 16060959  T

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Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 44573428 - 44573348
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  44573428 ggcctaactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 44573348  T

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Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 45443382 - 45443302
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| || ||||||||||| || |||||| |||||||||||||| | |||||||||||||| | |||||||    
T  45443382 ggcctaactcatccttaaaaaaccggcttgtaaggtgaagagtgcctcctctttataaactcttctcaagagtgctatcta 45443302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 44573741 - 44573671
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||    
T  44573741 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 44573671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 44574038 - 44573968
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||    
T  44574038 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 44573968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 11414467 - 11414395
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||||| |||||| ||||||||||||||||| |||||  | || ||||||||| | ||||||||||||||    
T  11414467 gaggcctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaaga 11414395  T

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Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 13769293 - 13769373
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||| |||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  13769293 ggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 13769373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 49477636 - 49477556
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  49477636 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 49477556  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 50203859 - 50203939
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||| || || |||||  |||||||||||||| | |||||||||||||| || ||||||    
T  50203859 ggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatcta 50203939  T

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Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 31563716 - 31563787
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||||||||||||| |||||  |||||||||||||| | ||||||  |||||  |||||||||||||||    
T  31563716 tacaaaaccggcttctaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaactgat 31563787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 27219421 - 27219351
Alignment:
Q  39 atccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  27219421 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 27219351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 39078773 - 39078843
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  39078773 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 39078843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 43101381 - 43101459
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||||| ||||||||||  || || |||||  |||||||||||||| | |||||||||||||| ||||||||| |||||    
T  43101381 tcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgat 43101459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 50692425 - 50692355
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  50692425 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 50692355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16045351 - 16045444
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||||||| | | |||||| ||||| |||||| ||||||||| |||| |||| |||| |||| ||| | ||| | ||||||||||||||||    
T  16045351 ataccatgtaatgaatatcgagacctaactcatccttacaaaaccagcttgtacgatgaagagtgtctcatatttataaactcttctcaagaat 16045444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 38300752 - 38300833
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatct 108  Q
    ||||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||  |||||  ||||||||    
T  38300752 gaggcctaactcatccgtacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatct 38300833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 39956677 - 39956746
Alignment:
Q  30 gcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  39956677 gcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 39956746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 49477429 - 49477348
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaa 110  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||| ||||||||| || |||||||    
T  49477429 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttatctaa 49477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 3985875 - 3985807
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaa 97  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||| |||||||| | ||||||||||||    
T  3985875 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaa 3985807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 9264088 - 9264168
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  9264088 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 9264168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 34715465 - 34715525
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaa 97  Q
    |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||    
T  34715465 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaa 34715525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 51338441 - 51338529
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||| |||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || |||||| |||||    
T  51338441 gaggactaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgat 51338529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 51642430 - 51642510
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  51642430 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 51642510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 51642637 - 51642717
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  51642637 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 51642717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 53966295 - 53966255
Alignment:
Q  69 agtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  53966295 agtgcctcctctttataaactcttctcaagaatcctatcta 53966255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 54369141 - 54369061
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||| ||||||| || ||  ||||  |||||||||||||| | |||||||||||||| |||||||||    
T  54369141 ggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatcta 54369061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 31564020 - 31564091
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||||||||||||| || |||||  |||||||||||||| | ||||||  |||||  |||||||||||||||    
T  31564020 tacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaactgat 31564091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 9264295 - 9264365
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  |||||||||||||    
T  9264295 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaaga 9264365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 14170009 - 14170071
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||||| |||||||||||||| || |||||  |||||||||||||| | || |||||||||||    
T  14170009 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaaga 14170071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 21750577 - 21750495
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| |||||| |||||||| ||||| || |||||  |||||||||||||| | ||||||  |||||  |||||||||||    
T  21750577 ggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaac 21750495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 22339843 - 22339773
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||| ||| || |||||  | |||||||||||| | ||||||||||||||    
T  22339843 ggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaaga 22339773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 22407443 - 22407509
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctc 95  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| |  |||||||||    
T  22407443 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctc 22407509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 22407650 - 22407716
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctc 95  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| |  |||||||||    
T  22407650 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctc 22407716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 50692628 - 50692558
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||| ||||||    
T  50692628 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaaga 50692558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 9179235 - 9179162
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatc 102  Q
    ||||||| |||||| |||||||||| ||| || |||||  ||||| |||||||| | ||||||||||| |||||    
T  9179235 ggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcatcctctttataaactcttctcatgaatc 9179162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 22666343 - 22666400
Alignment:
Q  52 cggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||||||  |||| | ||||||| | ||||||||||||||||||||||||    
T  22666343 cggcttgtacggtgaggagtgacgcctctttataaactcttctcaagaatcctatcta 22666400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 4029646 - 4029726
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||| || || |||||| | ||  |||||||| | |||||||||||||| || ||||||    
T  4029646 ggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatcta 4029726  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 9264502 - 9264582
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| ||  ||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  9264502 ggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatcta 9264582  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 19820528 - 19820600
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||||| |||||| ||||||||||| || || |||||  | || ||||||||| | ||||||||||||||    
T  19820528 gaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaaga 19820600  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 35011966 - 35011886
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||| |  || |||||  |||||||||||||| | ||||||| |||||| || ||||||    
T  35011966 ggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatcta 35011886  T

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Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 10862039 - 10862140
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | || |||| |||| |||||| |||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||||||||||    
T  10862039 ataccatgtaacgaatatggaggtctaactcatccttacaaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatc 10862138  T
Q  108 ta 109  Q
    ||    
T  10862139 ta 10862140  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 15962138 - 15962239
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | || ||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||| ||||||||| |||||||    
T  15962138 ataccatgtaacgaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagattcctatc 15962237  T
Q  108 ta 109  Q
    ||    
T  15962238 ta 15962239  T

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Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 11350174 - 11350269
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | ||| || ||||| ||||||||||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||| ||||||||    
T  11350174 tgtaacgaatatcaagacctaactcatccatacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatcta 11350269  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 17325277 - 17325192
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| |||||| |||||||||||||| ||| ||||| |||||||||||||| | || |||||| ||||||||||||||    
T  17325277 atcgaggcctaactcatccttacaaaaccggcttgtacagtgaagagtgcctcctctttataaattcttcttaagaatcctatcta 17325192  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 36161344 - 36161427
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatct 108  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||  ||||||||||| |||| |||||||||||||||||||||||    
T  36161344 atcgagacctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctc-ttttaaactcttctcaagaatcctatct 36161427  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 28193556 - 28193663
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| | ||||||| |||| |||||| |||||||| | ||| ||||||||  |||||||||||||| | || |||||||||||||||||||    
T  28193556 ataccatgtcacgaatatcgaggtctaactcatccttacaaaactgacttgtacggtgaggagtgcctcctctttataaaatcttctcaagaatcctatc 28193655  T
Q  108 taactgat 115  Q
    || |||||    
T  28193656 tatctgat 28193663  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 39420814 - 39420719
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| |||||| |||||||||||||| ||| ||||  |||||||||||||| | |||||||||||| | |||||||||    
T  39420814 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtactgtgaggagtgcctcctctttataaactcttctcaaaattcctatcta 39420719  T

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Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 33532740 - 33532818
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||| ||| || |||||||||||||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  33532740 cctaactcaaccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatcta 33532818  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 936919 - 936834
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||||  |||| ||||||||| | |||||||||||||| |||||||||    
T  936919 atcgaggcctaactcatctatacaaaactggcttgtacggtgaggagtgtctcctctttataaactcttctcaagattcctatcta 936834  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 11349780 - 11349875
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | ||| || ||||| ||||||||||||||  ||||| ||||||||  |||||||||||||| | ||||||||||||||| ||||||||    
T  11349780 tgtaacgaatatcaagacctaactcatccatacaaaattggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatcta 11349875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 43195886 - 43195800
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | ||||||| |||||    
T  43195886 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgat 43195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 3976473 - 3976545
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaat 101  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||||    
T  3976473 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaat 3976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 11969154 - 11969074
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  11969154 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 11969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 15961786 - 15961882
Alignment:
Q  13 atgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||| | || ||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | ||   ||||||||| |||||||||    
T  15961786 atgtaacgaatattgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaaagattctcaagattcctatcta 15961882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 21214203 - 21214283
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  21214203 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 21214283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 32810863 - 32810958
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| ||||||  ||||||||||||| || |||||  | || ||||||||| | ||||||| ||||||||||||||||    
T  32810863 tgtaacgaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatcta 32810958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 14280384 - 14280302
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| |||||  |||||||| ||||| || | |||| |||||||||||||| | ||||||||||| ||||||||||||    
T  14280384 gaggcctaactcatcattacaaaacaggcttgtatgatgaagagtgcctcctctttataaactcttctcatgaatcctatcta 14280302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 28193335 - 28193417
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| |||||  || |||| |||||| ||||||||  |||||||||| ||| | ||||||||||||||||||||||||    
T  28193335 gaggcctaactcatctttaaaaaatcggcttgtacggtgaggagtgcctcctatttataaactcttctcaagaatcctatcta 28193417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 38760319 - 38760405
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||  |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| ||||||||| |||||    
T  38760319 ggcctaactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatctacctgat 38760405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 42768336 - 42768406
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||||    
T  42768336 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 42768406  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 6183371 - 6183448
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||||| || ||||| ||||| ||||||||| | |||||||||||||| | |||||||    
T  6183371 ctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatcta 6183448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 21213895 - 21213967
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  21213895 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 21213967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 25441796 - 25441712
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||| |||||| |||||||||||||| || |||||  |||||| ||||||| | |||||||||||||| | ||||||| |||||    
T  25441796 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgccccctctttataaactcttctcaagagtactatctatctgat 25441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 7877944 - 7877866
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| |||||||||||||| || |||||  |||| ||||||||| | |||||||||| ||| | |||||||    
T  7877944 cctaattcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcgagagtgctatcta 7877866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 10861851 - 10861913
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    ||||||||  |||| ||||||||  |||||||||||||| | |||||||||||||||||||||    
T  10861851 tacaaaacttgcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctat 10861913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 20998991 - 20999061
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  20998991 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 20999061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 23054428 - 23054358
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||| ||| || |||||  |||||||||||||| | ||||||||||||||    
T  23054428 ggcctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 23054358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 883611 - 883683
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  883611 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 883683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 3977005 - 3977085
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| ||   |||  |||||||||||||| | |||||||||||||| | |||||||    
T  3977005 ggcctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatcta 3977085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 17727506 - 17727426
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | ||||| |||||| | |||||||||||||| || ||||||    
T  17727506 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatcta 17727426  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 10862423 - 10862328
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| ||| |  |||||||| ||||| ||||||||  |||| ||||||||| | ||||||||| || |||| ||||||    
T  10862423 tgtaacgaatatcgaggcctaactcacctttacaaaactggcttgtacggtgatgagtgtctcctctttataaactcttctaaaaaatcttatcta 10862328  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 44266305 - 44266396
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||| |||||||||||||| | |||| || | |||  |||| ||||||||| | |||||||||||| |||| |||||| |||||    
T  44266305 atcgaggtctaactcatccatacaaaatcagcttgtatgatgatgagtgtctcctctttataaactcttctcaaaaatcttatctatctgat 44266396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 19860139 - 19860069
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || ||||   | |||||||||||| | ||||||||||||||    
T  19860139 ggcctaaatcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaaga 19860069  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 34775459 - 34775389
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | || |||||||||||    
T  34775459 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaaga 34775389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 10849493 - 10849578
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactga 114  Q
    ||||||| |||||| |||||||||  ||| || |||||  |||||||||||||| | ||||||| ||||||  |||||||| ||||    
T  10849493 ggcctaactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactcttatcaagagccctatctatctga 10849578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 18901881 - 18901946
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||| ||||| || |||||| |||||||||||||| | ||||||| |||||| || ||||||    
T  18901881 tacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatcta 18901946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 27545121 - 27545198
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| ||||||||||| || || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  27545121 ctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 27545198  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 33985773 - 33985851
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  33985773 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttat--actcttctcaagagtcttatcta 33985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 3435488 - 3435568
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||| || || |||||  | |||||||||| | | |||||||||||||| || ||||||    
T  3435488 ggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatcta 3435568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 4505627 - 4505671
Alignment:
Q  22 aaatcgaggcctaattcatccatacaaaaccggcttctacggtga 66  Q
    ||||||||| |||| |||||| |||||||||||||| ||||||||    
T  4505627 aaatcgaggtctaactcatccttacaaaaccggcttttacggtga 4505671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 12431992 - 12431920
Alignment:
Q  37 tcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| |||||||||||||| || |||||  | || ||||||||| | |||||||||||||| || ||||||    
T  12431992 tcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatcta 12431920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 14289014 - 14288950
Alignment:
Q  38 catccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatc 102  Q
    ||||| |||||| ||| ||| ||||||||  |||| ||||||||| | |||||||||||||||||    
T  14289014 catccttacaaatccgacttgtacggtgaggagtgtctcctctttataaactcttctcaagaatc 14288950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 17509197 - 17509125
Alignment:
Q  43 atacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||||||||| |||| || |||||  |||||||||||||| | |||||||||||||  | ||||||| |||||    
T  17509197 atacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagggtgctatctatctgat 17509125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 43169344 - 43169264
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| || ||| |||||||| |||||  | |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  43169344 ggcctaactcttccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 43169264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 43688423 - 43688503
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||  || |||||||||||  | |||||| ||||| || ||||| | |||||||||||||| |||||||||    
T  43688423 ggcctaactcatctttataaaaccggcttacaaggtgaagagtgcatcttctttataaactcttctcaagagtcctatcta 43688503  T

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Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 84031 - 84113
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||||||| | |||||||||||||||||||||    
T  84031 atcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctat 84113  T

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Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 22196534 - 22196635
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| |||||||||| ||||||| |||||| |||||||||||||| ||||||||  |||| ||||||||| | |||||||||||||| || ||||    
T  22196534 ataccatgtcacggaaatcggggcctaactcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatc 22196633  T
Q  108 ta 109  Q
    ||    
T  22196634 ta 22196635  T

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Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 29396330 - 29396431
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactg 113  Q
    ||||||| | |||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||| ||||||||| ||||||||| |||    
T  29396330 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaacttttctcaagattcctatctatctg 29396429  T
Q  114 at 115  Q
    ||    
T  29396430 at 29396431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30329959 - 30329858
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||| ||| | |||||||||||| | ||||||||||||||| ||| ||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  30329959 ataccatgtcacgaatatcgaggcctaactgatccatacaaaaccgacttgtacggtgaggagttcctcctctttataaactcttctcaagaatcctatc 30329860  T
Q  108 ta 109  Q
    ||    
T  30329859 ta 30329858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 32395300 - 32395396
Alignment:
Q  13 atgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||| | |||||||| ||| ||||||||||||||||||||| ||| ||||  |||||||||||||| | |||||||||||||| |||||||||    
T  32395300 atgtaacgaatatcgaggcgtaactcatccatacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatcta 32395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 2471690 - 2471775
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||||||| | |||||||||||| || ||||||||    
T  2471690 atcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatcta 2471775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 22196323 - 22196408
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| | |||||||||||||| | |||||||    
T  22196323 atcgaggcctaactcatccttacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 22196408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 83808 - 83889
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    |||||| ||||| ||||||||||||||||||||| ||||||| | |||||||||||||| | |||| ||||||||||||||||    
T  83808 atcgagacctaactcatccatacaaaaccggcttgtacggtg-agagtgcctcctctttataaacttttctcaagaatcctat 83889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 29432514 - 29432432
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| |||||| |||||||||||||| || ||||| ||||||||||||||| | ||||||| |||||| |||||||||||    
T  29432514 ggcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagtcctatctaac 29432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 14769832 - 14769914
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||| |||||| | |||||||||||| ||||||||  |||| ||| ||||| | ||||||||||||||||||||||||    
T  14769832 gaggcctaactcatcctttcaaaaccggcttgtacggtgaggagtgtctcgtctttataaactcttctcaagaatcctatcta 14769914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 38663349 - 38663263
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| |||||||| ||||||    
T  38663349 ggcctaactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatcttactgat 38663263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 24994171 - 24994094
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||||||||| |||||||    
T  24994171 ggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactcttctcaagcatcctat 24994094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 3763008 - 3762928
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||| | |||||||||||| | |||||||||||||| || ||||||    
T  3763008 ggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtcttatcta 3762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 19439960 - 19439876
Alignment:
Q  31 cctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||| ||| || |||||||||||||| ||||||||  |||| ||||||||| | || ||||||||||||||||||||| |||||    
T  19439960 cctaactcaaccctacaaaaccggcttgtacggtgaggagtgtctcctctttataaattcttctcaagaatcctatctatctgat 19439876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 24918263 - 24918183
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||  |||||||||    
T  24918263 ggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactcttctcaagcgtcctatcta 24918183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 24792246 - 24792348
Alignment:
Q  6 caataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatccta 105  Q
    |||| |||||||||| | |||||||||||| ||||||  |||||||||| || || |||||  ||||||||||| || | |||||||||||||| |||||    
T  24792246 caatgccatgtaacgaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctc-ttataaactcttctcaagattccta 24792344  T
Q  106 tcta 109  Q
    ||||    
T  24792345 tcta 24792348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 13843799 - 13843713
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||| |||||||||||||| || |||||  || ||||||||||| | |||||||||||||| | ||||||| |||||    
T  13843799 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgat 13843713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 30330180 - 30330083
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcat--ccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| ||||  || | |||||||||||| ||||||||  |||||||||||||| |  |||||||||||||||| ||||||    
T  30330180 tgtaacgaatatcgaggcctaactcatatccttgcaaaaccggcttgtacggtgaggagtgcctcctctttatatactcttctcaagaatcatatcta 30330083  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 40169043 - 40169129
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| |||||| |||||||||||||| || ||||| || |||||||||||| |  ||||||||||||| || |||||| |||||    
T  40169043 ggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatctatctgat 40169129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 13413686 - 13413606
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  13413686 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 13413606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 13844115 - 13844035
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||  || || ||||| ||||||||||||||| | |||||||||||||| | |||||||    
T  13844115 ggcctaactcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatcta 13844035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 35526990 - 35527070
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  35526990 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 35527070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 37995636 - 37995716
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| | |||||||    
T  37995636 ggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatcta 37995716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 38131866 - 38131786
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | || ||||||||| | |||||||||||||| |||||||||    
T  38131866 ggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatcta 38131786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 33040159 - 33040088
Alignment:
Q  35 attcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    |||||||| |||||||||||||| || |||||  |||||||||||| | | ||||||| |||||||||||||    
T  33040159 attcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttttcaagaatcctat 33040088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 48106 - 48176
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  48106 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 48176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 34457405 - 34457335
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || ||||| || ||| |||||||| | ||||||||||||||    
T  34457405 ggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaaga 34457335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 873698 - 873778
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||| |||| || |||||  | |||||||||| | | |||||||||||||| |||||||||    
T  873698 ggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagtcctatcta 873778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 18541824 - 18541744
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||| |||||| || | |||  |||||||||||||| | |||| |||||||||||| ||||||    
T  18541824 ggcctaactcatccttacaaaatcggcttgtaggttgaggagtgcctcctctttataaactattctcaagaatcttatcta 18541744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 37656734 - 37656814
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  37656734 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 37656814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 38376833 - 38376753
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  | || ||||||||| | |||||||||||||| || ||||||    
T  38376833 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatcta 38376753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 48313 - 48383
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||| |||||||||    
T  48313 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttttctcaaga 48383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 2716648 - 2716578
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||||||||| || | ||||||| ||||||    
T  2716648 ggcctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactcttatcaaga 2716578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 12965248 - 12965330
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaac 111  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||| |||||||| | ||||||  |||||  |||||||||||    
T  12965248 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactctgatcaagcttcctatctaac 12965330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 27760179 - 27760097
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||| ||| ||| || |||||||||||||| || |||||  |||||||| |||||   |||||||||||||| |||||||||    
T  27760179 gaggcttaactcaaccttacaaaaccggcttgtaaggtgaggagtgcctcttctttagaaactcttctcaagagtcctatcta 27760097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 28156132 - 28156070
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactct 91  Q
    |||||||||||||| |||||||||||||| || |||||  | |||||||||||| | ||||||    
T  28156132 ggcctaattcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct 28156070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 28358037 - 28358107
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | || ||||||||| | ||||||||||||||    
T  28358037 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaaga 28358107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 34457198 - 34457128
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | ||| |||||||| | ||||||||||||||    
T  34457198 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttataaactcttctcaaga 34457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 35527276 - 35527342
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctc 95  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||    
T  35527276 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttctc 35527342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 43490272 - 43490338
Alignment:
Q  43 atacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||||||||||| || |||||| | || ||||||||| | |||||||||||||| || ||||||    
T  43490272 atacaaaaccggcttgtaaggtgaagattgtctcctctttataaactcttctcaagagtcttatcta 43490338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 1028111 - 1028175
Alignment:
Q  45 acaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||| || || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  1028111 acaaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 1028175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 1892092 - 1892172
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  || ||||||||||| | || |||  |||||| |||||||||    
T  1892092 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagggcctcctctttataaattctcatcaagagtcctatcta 1892172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 2908771 - 2908839
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaa 97  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||| |||||||    
T  2908771 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaa 2908839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 5095888 - 5095940
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtga 66  Q
    ||||||| | |||||||||||| |||||| |||||||||||||| || |||||    
T  5095888 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtagggtga 5095940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 37781846 - 37781926
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||| |||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  37781846 ggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 37781926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 26842843 - 26842742
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | |||||||||||| ||||||  |||||||| |||| ||||||||  |||||||||||||| | ||||||||||||||| ||||||    
T  26842843 ataccatgtaacgaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatc 26842744  T
Q  108 ta 109  Q
    ||    
T  26842743 ta 26842742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 8427657 - 8427579
Alignment:
Q  24 atcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatc 102  Q
    |||||||||||| ||| || |||||||||| ||| ||||||||  |||||||||||||| | |||||||||||||||||    
T  8427657 atcgaggcctaactcaaccttacaaaaccgacttgtacggtgaggagtgcctcctctttctaaactcttctcaagaatc 8427579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 33396430 - 33396329
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| |||||    ||||| |||||| ||||||||| |||| |||  |||  |||||||||||||| | ||||||||||||||||||||||    
T  33396430 ataccatgtaacgaaaatcagctcctaactcatccttacaaaaccagcttttacaatgaggagtgcctcctctttataaactcttctcaagaatcctatc 33396331  T
Q  108 ta 109  Q
    ||    
T  33396330 ta 33396329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 8144119 - 8144039
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | |||||||||||||| | |||||||    
T  8144119 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatcta 8144039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 25184327 - 25184232
Alignment:
Q  14 tgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| | |||||||||||| ||||||  ||||||||||||| || |||||  | ||| |||||||| | ||||||| ||||||||||||||||    
T  25184327 tgtaacgaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttatcaagaatcctatcta 25184232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 1744844 - 1744924
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||| |||||| | |||||||    
T  1744844 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatcta 1744924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 24055111 - 24055191
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||| ||||| | |||||||||||||| | |||||||    
T  24055111 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatcta 24055191  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 10733440 - 10733510
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  |||| ||||||||| | ||||||||||||||    
T  10733440 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaaga 10733510  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 15101113 - 15101183
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  15101113 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 15101183  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 16877012 - 16877082
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  16877012 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 16877082  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 17096703 - 17096780
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||||| ||||| ||  |||  ||||||||| | |||||||||||||| |||||||||    
T  17096703 ctaactcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaactcttctcaagactcctatcta 17096780  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 21067074 - 21067139
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| || || ||  |||||||||||||| | |||||||||||||||| |||||||    
T  21067074 tacaaaaccggcttgtaaggggaggagtgcctcctctttataaactcttctcaagaatgctatcta 21067139  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 21088865 - 21088930
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| || || ||  |||||||||||||| | |||||||||||||||| |||||||    
T  21088865 tacaaaaccggcttgtaaggggaggagtgcctcctctttataaactcttctcaagaatgctatcta 21088930  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 25184126 - 25184025
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||  | |||||||||||| | ||||  ||||||||||||| ||||||||  | || || |||||| | ||||||| ||||||||| ||||    
T  25184126 ataccatgtaacaaatatcgaggcctaacttatccccacaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatc 25184027  T
Q  108 ta 109  Q
    ||    
T  25184026 ta 25184025  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 10418340 - 10418420
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||||||||| || |||||  |||||||||||||| | ||||||  |||||| | |||||||    
T  10418340 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatcta 10418420  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 19712611 - 19712691
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||| |||| || |||||  | |||||||||||| | |||||||||||||| | |||||||    
T  19712611 ggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtgctatcta 19712691  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 19054592 - 19054525
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    |||| |||||| |||||||||||||| || |||||  |||||||| ||||| | ||||||||||||||    
T  19054592 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaaga 19054525  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 27443554 - 27443625
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| ||| || ||||||||  ||||  |||||||| | |||||||||||||||||||||||| |||||    
T  27443554 tacaaaatcggattgtacggtgaggagtgtttcctctttataaactcttctcaagaatcctatctatctgat 27443625  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 16876832 - 16876902
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | |||| |||||||||    
T  16876832 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaaga 16876902  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 24558685 - 24558599
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| ||||||  ||||||||||||| || |||||  | |||||||||||| |  ||||||||||||| || |||||| |||||    
T  24558685 ggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgat 24558599  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 28149895 - 28149825
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| |||||| |||||||||||||| || |||||  | |||||||||||| | ||||||| ||||||    
T  28149895 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaaga 28149825  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 5269278 - 5269355
Alignment:
Q  32 ctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||| |||||| |||||||||||||| || |||||  | ||||| |||||| | |||||||||||||| || ||||||    
T  5269278 ctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatcta 5269355  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 30718799 - 30718734
Alignment:
Q  13 atgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcct 78  Q
    |||||||| | |||||| | ||| ||||||| ||||||||||||| ||||||||  ||||||||||    
T  30718799 atgtaacgaatatcgagacttaactcatccacacaaaaccggcttgtacggtgagtagtgcctcct 30718734  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 11313384 - 11313464
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| |||||||| ||||| || |||||  | |||||||||||| |  ||||||||||||| || ||||||    
T  11313384 ggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatcta 11313464  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 12134485 - 12134565
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||| ||||||||||| || || ||| |  |||| ||||||||| | |||||||||||||| | |||||||    
T  12134485 ggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatcta 12134565  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 13673979 - 13673871
Alignment:
Q  7 aataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctat 106  Q
    |||||||||| | | | ||||| |||||| |||||  ||||||| ||| || ||||||||  || | |||||| || | ||||||||||||||| |||||    
T  13673979 aataccatgtcatgaatatcgaagcctaactcatcactacaaaatcggtttgtacggtgatgagggtctcctcattataaactcttctcaagaaacctat 13673880  T
Q  107 ctaactgat 115  Q
    ||| |||||    
T  13673879 ctatctgat 13673871  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 23591633 - 23591545
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    |||| |||| |||||| ||||||| |||||| || |||||| |||| ||||| | | | |||| |||||||||||| |||||| |||||    
T  23591633 gaggtctaactcatccttacaaaatcggcttgtaaggtgaagagtgtctcctttatataaacttttctcaagaatcttatctatctgat 23591545  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 33396587 - 33396547
Alignment:
Q  69 agtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| | |||||||||||| |||||||||||    
T  33396587 agtgcctcctctttataaactcttctcaaaaatcctatcta 33396547  T

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Target: scaffold0785 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 3101 - 3202
Alignment:
Q  8 ataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatc 107  Q
    ||||||||||||| | |||||||||||| |||||| || |||||| ||||||| |||||  |||| ||||||||| | |||||||||||| ||| |||||    
T  3101 ataccatgtaacgcatatcgaggcctaactcatccttataaaaccagcttctatggtgaggagtgtctcctctttataaactcttctcaaaaattctatc 3200  T
Q  108 ta 109  Q
    ||    
T  3201 ta 3202  T

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Target: scaffold0012 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 165871 - 165806
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    |||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||| |||||||    
T  165871 tacaaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagaattctatcta 165806  T

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Target: scaffold0166 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 34629 - 34731
Alignment:
Q  6 caataccatgtaacggaaatcgaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatccta 105  Q
    |||| |||||||||| | |||||||||||| ||||||  |||||||||| || || |||||  ||||||||||| || | |||||||||||||| |||||    
T  34629 caatgccatgtaacgaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctc-ttataaactcttctcaagattccta 34727  T
Q  106 tcta 109  Q
    ||||    
T  34728 tcta 34731  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 76954 - 76874
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatcta 109  Q
    ||||||| |||||  |||||||||||||| || |||||  | |||||||||||| | |||||||||||||| || ||||||    
T  76954 ggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 76874  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 43807 - 43736
Alignment:
Q  44 tacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaagaatcctatctaactgat 115  Q
    ||||||| ||| || ||||||||  ||||  |||||||| | |||||||||||||||||||||||| |||||    
T  43807 tacaaaatcggattgtacggtgaggagtgtttcctctttataaactcttctcaagaatcctatctatctgat 43736  T

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Target: scaffold0434 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 13408 - 13338
Alignment:
Q  29 ggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||| ||||||  ||||||||||||| || |||||  | |||||||||||| | ||||||||||||||    
T  13408 ggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 13338  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 21263 - 21335
Alignment:
Q  27 gaggcctaattcatccatacaaaaccggcttctacggtgaaaagtgcctcctctttttgaactcttctcaaga 99  Q
    ||||||||| |||||| |||||||||  ||| || |||||  | |||||||||||| | ||||||||||||||    
T  21263 gaggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaaga 21335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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