View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1711_low_19 (Length: 452)
Name: NF1711_low_19
Description: NF1711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1711_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 19 - 448
Target Start/End: Complemental strand, 6364612 - 6364184
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6364612 |
gtagacataccttccaagtgaaacaccagctcctttagtctactacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
6364513 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcc |
218 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6364512 |
tgggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcc |
6364413 |
T |
|
Q |
219 |
cttaccctcgaagagggagaaccggcaggaaagcagctcgtaaaggttataaactttatgttctatcttaacacttgagtatgttatattttaagaaatt |
318 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
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|
T |
6364412 |
cttaccctcgaagagggagaaccggcaggaaagcagctcgtaaaggttat-aactttacgttctatcttaacacttgagtatgttatattttaagaaatt |
6364314 |
T |
|
Q |
319 |
ctggcaaaaattaagtgatatggtactaaaatgtgaaattgtattctacttgacaactaatgtttttatccctgatgttgtttactaagtctttttgttg |
418 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6364313 |
ctggcaaaaattaagtgatatggtactaaaatgtgaaattgtattctacttgacaactaatgtttttatccctgatgttgtttactaagtctttttgttg |
6364214 |
T |
|
Q |
419 |
atacaaatgtttactctgcctatgattcta |
448 |
Q |
|
|
||||||||||||||||||| |||||||||| |
|
|
T |
6364213 |
atacaaatgtttactctgcttatgattcta |
6364184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 7460811 - 7460584
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
|||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
7460811 |
gtagacataccttccaagtgcaacaccagctccattagtgtactacagacaagaagaattgaagactttaagaggagatggaacgggagagcgcaaggaa |
7460712 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcc |
218 |
Q |
|
|
||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||| |||||||||||||||| ||||||| || | | | | | |
|
|
T |
7460711 |
tgggacagaatatatgattatgatgtctacaatgacttgggtgatcccgaccagaaagctagcttggctcgtcctgttgctggaggacctggaaacttgc |
7460612 |
T |
|
Q |
219 |
cttaccctcgaagagggagaaccggcag |
246 |
Q |
|
|
||||||||||||| || ||||||||||| |
|
|
T |
7460611 |
cttaccctcgaaggggaagaaccggcag |
7460584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 20 - 269
Target Start/End: Complemental strand, 6275894 - 6275645
Alignment:
Q |
20 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
119 |
Q |
|
|
|||||||| |||||||||||||||||| |||| ||||| | ||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
T |
6275894 |
tagacatatcttccaagtgaaacaccacctccattagtctactatagacaagaagagttgaacactttaagaggagatggaacaggagagcgtaaagaat |
6275795 |
T |
|
Q |
120 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
219 |
Q |
|
|
||||||| || ||||| || ||||||||||||||| |||||||| |||||||| || || ||||||||||| ||| |||||||||| | |||| | || |
|
|
T |
6275794 |
gggaaaggatctatgactacgatgtctacaatgatgtgggtgatcctgacaagaaagcaagcttggctcgtcccgttattggaggatccaacaccttgcc |
6275695 |
T |
|
Q |
220 |
ttaccctcgaagagggagaaccggcaggaaagcagctcgtaaaggttata |
269 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
6275694 |
ttaccctcgaagagggagaaccggcaggaaaccagctaagaaaggttata |
6275645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 6353739 - 6353596
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
6353739 |
gtagacataccttccaagtgaaacaccggctccattagtgtactacagacaagaagaattgaagactttaagaggagatggaactggagagcgcaaggaa |
6353640 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggtga |
162 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
6353639 |
tgggaaagaatatatgattacgatgtctacaatgatttgggtga |
6353596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 20 - 275
Target Start/End: Complemental strand, 6290646 - 6290391
Alignment:
Q |
20 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
119 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
T |
6290646 |
tagacataccttccaagtgaaacaccagctccattagtgtactatagacaagaagaattgaagactttaagaggagatggaacaggagagcgcaaggaat |
6290547 |
T |
|
Q |
120 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
219 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||| ||||| ||| ||| || ||||| |||| || |||| ||||| |||| |||| |
|
|
T |
6290546 |
gggaaagaatatatgattacgatgtctacaatgatttaggtgagcctgactcgaaacctcaattggcgcgtcaaattcttgggggatcgagcaatttccc |
6290447 |
T |
|
Q |
220 |
ttaccctcgaagagggagaaccggcaggaaagcagctcgtaaaggttataaacttt |
275 |
Q |
|
|
|||||||||||| || |||||||||||| || ||||| |||||||||||||||| |
|
|
T |
6290446 |
ttaccctcgaaggggaagaaccggcagggaaccagctaagaaaggttataaacttt |
6290391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 289
Target Start/End: Complemental strand, 6333322 - 6333053
Alignment:
Q |
20 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
119 |
Q |
|
|
||||| ||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| || ||||| || |||| |
|
|
T |
6333322 |
tagacgtaccttccaagcgaaacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaat |
6333223 |
T |
|
Q |
120 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
219 |
Q |
|
|
||| || || ||||| || ||||| |||||||| ||||||||| |||||||| | || ||||||||||| |||||||||||||| | | | | || |
|
|
T |
6333222 |
cggataggatctatgactacgatgtttacaatgacttgggtgatcctgacaagaaagaaagcttggctcgtcccgttgttggaggatccaataacttgcc |
6333123 |
T |
|
Q |
220 |
ttaccctcgaagagggagaaccggcaggaaagcagctcgtaaaggttataaactttatgttctatcttaa |
289 |
Q |
|
|
|||||||||||| |||||||||||||||||| ||| |||||| |||||||||||| |||||||||| |
|
|
T |
6333122 |
ttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggtgataaactttatgctctatcttaa |
6333053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 6392235 - 6392094
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
|||| ||||||||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
6392235 |
gtaggcataccttctaagggaaacaccagctccattactgtactacagacaagaagaattgaatactttaagaggagatggaactggagagcgtaaggaa |
6392136 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggt |
160 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
6392135 |
tgggacagaatatatgattatgatgtctacaatgatttgggt |
6392094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 6425429 - 6425192
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
||||||||||||||||||||||||||| ||||| || |||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
6425429 |
gtagacataccttccaagtgaaacaccggctccattggtgtactatagacaagaagagttgaagactttaagaggagatggaaaaggagagcgcaaggaa |
6425330 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcc |
218 |
Q |
|
|
|||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||| |||| |||||| ||| |||||||||| |||||| | | |
|
|
T |
6425329 |
tgggaaaggatctatgattacgatgtctacaatgatttgggtgagcctgactcgaaacctaccttgggtcgtccagttcttggaggatcgagcaccttgc |
6425230 |
T |
|
Q |
219 |
cttaccctcgaagagggagaaccggcaggaaagcagct |
256 |
Q |
|
|
||||||||||||| |||||||| ||||| ||| ||||| |
|
|
T |
6425229 |
cttaccctcgaagggggagaacaggcagaaaaccagct |
6425192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 270
Target Start/End: Complemental strand, 6322755 - 6322505
Alignment:
Q |
20 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
119 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||| | ||| ||| |||||||||||||||||||||||||||||||||| || |||| |||||| |
|
|
T |
6322755 |
tagacataccttccaagtgaaacaccagctccattagtctactatagagaagaagaattgaagactttaagaggagatggaacgggtcagcgcaaggaac |
6322656 |
T |
|
Q |
120 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
219 |
Q |
|
|
|| ||||| ||||| || ||||| |||||||| ||||||||| |||||| |||| ||||||||||| ||| |||||||||| |||| | || |
|
|
T |
6322655 |
acgatagaatctatgactacgatgtttacaatgacttgggtgatcctgacaagtacgcacacttggctcgtcccgttattggaggatccgacaccttgcc |
6322556 |
T |
|
Q |
220 |
ttaccctcgaagagggagaaccggcaggaaagcagctcgtaaaggttataa |
270 |
Q |
|
|
|||||||||||| || ||||||||||||||| ||||| ||||||||||| |
|
|
T |
6322555 |
ttaccctcgaaggggcagaaccggcaggaaaccagctaaaaaaggttataa |
6322505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 6411399 - 6411258
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
|||| |||||||||||||| || ||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
T |
6411399 |
gtaggcataccttccaagtcaagcaccacaaccattagtgtactacatcaaagaagaattgaagactttaagaggagatggaactggagagcgtaaggta |
6411300 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggt |
160 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
6411299 |
tgggacagaatatatgattatgatgtctacaatgatttgggt |
6411258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 6371443 - 6371300
Alignment:
Q |
19 |
gtagacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaa |
118 |
Q |
|
|
|||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||| |
|
|
T |
6371443 |
gtagacataccttctaagtgaaacaccagctccattagtctactacagacaagaagagttgaagactttaagaggagatggaacgggtgagcgcaaagaa |
6371344 |
T |
|
Q |
119 |
tgggaaagaatatatgattatgatgtctacaatgatttgggtga |
162 |
Q |
|
|
||||| || || ||||| || ||||||||||||||||||||||| |
|
|
T |
6371343 |
tgggataggatctatgactacgatgtctacaatgatttgggtga |
6371300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 6265057 - 6264927
Alignment:
Q |
32 |
ccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatat |
131 |
Q |
|
|
|||||||||||||| ||||| | || | ||| |||||| ||| |||||||||||||||||||||||||| || ||||| || |||||||| ||| | | |
|
|
T |
6265057 |
ccaagtgaaacacctgctccacttgtctactatagacaattagagttgaagactttaagaggagatggaacgggggagcgcaaagaatgggacagagttt |
6264958 |
T |
|
Q |
132 |
atgattatgatgtctacaatgatttgggtga |
162 |
Q |
|
|
||||||||||||| ||||||||||||||||| |
|
|
T |
6264957 |
atgattatgatgtttacaatgatttgggtga |
6264927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 6458352 - 6458262
Alignment:
Q |
69 |
aagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgatttggg |
159 |
Q |
|
|
||||||| ||| ||||| ||||||||||||||||||||||||| || ||| ||| ||| | |||||||||||| | || ||||||||||| |
|
|
T |
6458352 |
aagaagagttgcagactctaagaggagatggaactggagagcgcaaagaagcggatagagtttatgattatgatatttataatgatttggg |
6458262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 6452259 - 6452174
Alignment:
Q |
69 |
aagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgat |
154 |
Q |
|
|
||||||| ||| ||| | |||||||||||||||| ||||| || || |||||||| || ||||| ||||||||||| || |||||| |
|
|
T |
6452259 |
aagaagagttgcagaatctaagaggagatggaaccggagaacgcaaagaatgggataggatatacgattatgatgtttataatgat |
6452174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 9603035 - 9603177
Alignment:
Q |
21 |
agacataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatg |
120 |
Q |
|
|
||||||| ||||||||| ||||||||||||| ||||| | ||||||||||||||||||| | | | ||||||||||||| |||||| | || || ||||| |
|
|
T |
9603035 |
agacatatcttccaagtcaaacaccagctccattagtctactacagacaagaagaattgcaaaatctaagaggagatggtactggacaacgaaaagaatg |
9603134 |
T |
|
Q |
121 |
ggaaagaatatatgattatgatgtctacaatgatttgggtgat |
163 |
Q |
|
|
||||||| | |||||||||||||||||||||||| | |||||| |
|
|
T |
9603135 |
ggaaagagtttatgattatgatgtctacaatgatcttggtgat |
9603177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 42694526 - 42694394
Alignment:
Q |
24 |
cataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatggga |
123 |
Q |
|
|
|||| ||||| ||||||||||| ||||| ||||| || ||| ||||||||||||| | |||||||||||||||||| ||||| || || |||||||| |
|
|
T |
42694526 |
catatcttcctagtgaaacaccggctccattagtccattatagagaagaagaattgaacaatttaagaggagatggaacaggagaacgcaaagaatggga |
42694427 |
T |
|
Q |
124 |
aagaatatatgattatgatgtctacaatgattt |
156 |
Q |
|
|
|||||| |||||||||||||||||||||||||| |
|
|
T |
42694426 |
aagaatctatgattatgatgtctacaatgattt |
42694394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 42687136 - 42687263
Alignment:
Q |
29 |
cttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaa |
128 |
Q |
|
|
|||||||||||||||||| |||| |||| || ||| ||||||||||| | | |||||| ||||||||||| |||||||| ||| | ||||| | |
|
|
T |
42687136 |
cttccaagtgaaacaccatctccactagtcaagtatagagaagaagaattgcaaaatttaaggggagatggaacaggagagcgcaagttacatgaaagga |
42687235 |
T |
|
Q |
129 |
tatatgattatgatgtctacaatgattt |
156 |
Q |
|
|
| || ||||| ||||||||||||||||| |
|
|
T |
42687236 |
tctacgattacgatgtctacaatgattt |
42687263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 36743886 - 36744021
Alignment:
Q |
24 |
cataccttccaagtgaaacaccagctcctttagtgttctacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatggga |
123 |
Q |
|
|
||||||||||| ||||| |||||||| |||| ||||||||| | ||||||| | |||||||| ||||||||||| | | ||||| |||||||||| |
|
|
T |
36743886 |
cataccttccacatgaaatgccagctccactagttaactacagacatgtagaattggatactttaaggggagatggaacagcaaagcgtgaggaatggga |
36743985 |
T |
|
Q |
124 |
aagaatatatgattatgatgtctacaatgatttggg |
159 |
Q |
|
|
||||| |||||||||||||| |||||||||||||| |
|
|
T |
36743986 |
cagaatctatgattatgatgtttacaatgatttggg |
36744021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 35722304 - 35722372
Alignment:
Q |
86 |
ttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgat |
154 |
Q |
|
|
||||||||| ||||| |||||||||||| ||| || ||||| |||||||||||||||||||||||| |
|
|
T |
35722304 |
ttaagaggaaatggagaaggagagcgtaagaaatcagacagaatctatgattatgatgtctacaatgat |
35722372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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