View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1722-Insertion-7 (Length: 923)
Name: NF1722-Insertion-7
Description: NF1722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1722-Insertion-7 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 848; Significance: 0; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 848; E-Value: 0
Query Start/End: Original strand, 8 - 920
Target Start/End: Complemental strand, 39569593 - 39568678
Alignment:
| Q |
8 |
ccttctagtttagtacactaaaaaccttgtttattctaatcttatacctttgggatccccagttatggaatgcagcaagatactgttgattggaaaatca |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39569593 |
ccttctagtttagtacactaaaaaccttgtttattctaatcttatacctttgggatccccagttatggaatgcagcaagatactgttgattggaaaatca |
39569494 |
T |
|
| Q |
108 |
agtatcaaccccttcaatattttaaaggctttgtttataagatataatcttatgcacaatctcattctcaagtatatgaatatttaagataaagttggta |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
39569493 |
agtatcaaccccttcaatattttaaaggctttgtttataagatataatcttatgcacaatctcattctcatgtatatgaatatttaagattaagttggta |
39569394 |
T |
|
| Q |
208 |
ttaaaatatacnnnnnnnntcactactgagatactggatagctactgtgtcttatattttatattagtgctcaaggataagagctccttcatggaaagca |
307 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39569393 |
ttaaaatatacaaaaaaaatcactactgagatactggatagctactgtgtcttatattttatattagtgctcaaggataagagctccttcatggaaagca |
39569294 |
T |
|
| Q |
308 |
tttccgatttaattaattacttttccacactatataatacatcacataggaaacctcaaactcaaactcaaa-caaacccattaaacatattctttagct |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
39569293 |
tttccgatttaattaattacttttccacactatataatacatcacataggaaacctcaaactcaaactcaaaacaaacccattaatcatattctttagct |
39569194 |
T |
|
| Q |
407 |
ttcatttcctctctctttttctagctacaacacataattagacaaattcctaattgctaaactctcaatttttcaatggatccattccatatacctgctt |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39569193 |
ttcatttcctctctctttttctagctacaacacataattagacaaattcctaattgctaaactctcaatttttcaatggatccattccatatacctgctt |
39569094 |
T |
|
| Q |
507 |
atgcaaacttcagctgtgaactaagaataatacaagcccgaaatgttgaatctgtcaagtccacgaaaaacttgtttgcaaggttgtatcttccaacagg |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39569093 |
atgcaaacttcagctgtgaactaagaataatacaagcccgaaatgttgaatctgtcaagtccacgaaaaacttgtttgcaaggttgtatcttccaacagg |
39568994 |
T |
|
| Q |
607 |
aaacaacaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtacccttttgggatgagtcttttaatctggattgttcttgcccccaagaa |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39568993 |
aaacaacaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtacccttttgggatgagtcttttaatctggattgttcttgcccccaagaa |
39568894 |
T |
|
| Q |
707 |
ttcttggaaaaccttaatcaacaaagcctagaggtggagctaaggcaaaggaagatgtgggggtcacagcttattggcaaaggtgagattccatggaaag |
806 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
39568893 |
ttcttggaaaaccttaatcaacaaagcctagaggtggagctaaggcaaaggaagatgtgggggtcacaacttattggcaaaggtgagattccatggaaag |
39568794 |
T |
|
| Q |
807 |
tgattcttgaatcacaaaacatggagctaa-aaaatggttgaaaatggaattggtgagtagaagtgattgc-aagaggctatgttcccaacaccagaagt |
904 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
39568793 |
tgattcttgaatcacaaaacatggagctaaaaaaatggttgaaaatggatttggtgagtagaagtgattgcaaagaggctatgttcccaacaccagaagt |
39568694 |
T |
|
| Q |
905 |
ggaagtggaaattaaa |
920 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
39568693 |
ggaagtggaaattaaa |
39568678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 328 - 920
Target Start/End: Original strand, 39581203 - 39581795
Alignment:
| Q |
328 |
ttttccacactatataatacatcacataggaaacctcaaactcaaactcaaacaaacccattaaacatattctttagctttcatttcctctct--ctttt |
425 |
Q |
| |
|
|||||||||||||||||| |||| |||| | | || |||||||||| |||||| || || || ||||||||||||||| |||||||| | ||| | |
|
|
| T |
39581203 |
ttttccacactatataatgcatcgcatacaacaacttaaactcaaac---aacaaaacccttcaatatattctttagctttactttcctctttttcttct |
39581299 |
T |
|
| Q |
426 |
tctagcta----caacacataattagacaaattcctaattgctaaactctcaatttttcaatggatccattccatatacctgcttatgcaaacttcagct |
521 |
Q |
| |
|
|||||||| |||||||||| ||| | ||||||| |||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |
|
|
| T |
39581300 |
tctagctatctacaacacataacaagaaacattccta---gcta--ctctcaatttttcaatggatccatgccacatatctgcttatgcaaacttcagtt |
39581394 |
T |
|
| Q |
522 |
gtgaactaagaataatacaagcccgaaatgttgaatctgtcaagtccacgaaaaacttgtttgcaaggttgtatcttccaacaggaaacaacaaaagaat |
621 |
Q |
| |
|
|||||| ||||| || |||||||||||| ||||||| ||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39581395 |
ttgaactgagaatcattcaagcccgaaatattgaatccgtcaaatccacaaaaaacttatttgctaggttatatcttccaacaggaaacaacaaaagaat |
39581494 |
T |
|
| Q |
622 |
tcaactaaacagcaaaagtgtttccaccaaatcagtacccttttgggatgagtcttttaatctggattgttcttgcccccaagaattcttggaaaacctt |
721 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
39581495 |
tcaactaaacagcaaaagtgtttccaccaaatcagtgcccttttgggatgagtcttttaatctagattgttcttgcccccaagaattcttggaaaacctt |
39581594 |
T |
|
| Q |
722 |
aatcaacaaagcctagaggtggagctaaggcaaaggaagatgtgggggtcacagcttattggcaaaggtgagattccatggaaagtgattcttgaatcac |
821 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
39581595 |
aatcaacaaagcctagaggtggagctaaggcaaaggaagatatgggggtcacaacttattgggaaatttgagattccatggaaagtgattcttgaatcac |
39581694 |
T |
|
| Q |
822 |
aaaacatggagct-aaaaaatggttgaaaatggaattggtgagtagaagtgattgc-aagaggctatgttcccaacaccagaagtggaagtggaaattaa |
919 |
Q |
| |
|
||||||||||| | |||||||||||||| ||||| ||||||||| ||||||||| | |||||| ||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
39581695 |
aaaacatggagttaaaaaaatggttgaagatggatttggtgagtggaagtgattacaaagagggtatgttcacaacaccagaagtggaagtggagattaa |
39581794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 366 - 920
Target Start/End: Original strand, 39584882 - 39585434
Alignment:
| Q |
366 |
aactcaaactcaaacaaacccattaaacatattctttagctttcatttcctctctctttttctagctacaacacataattagacaaat--tcctaattgc |
463 |
Q |
| |
|
|||||||||||||||||||| || || |||||||| |||||| |||||||||| ||||||| || |||||||||| |||||| || |||||| | |
|
|
| T |
39584882 |
aactcaaactcaaacaaaccacttcaatatattctt-agctttaatttcctctcc--ttttctaactgcaacacataactagacacatattcctaa---c |
39584975 |
T |
|
| Q |
464 |
taaactctcaatttttcaatggatccattccatatacctgcttatgcaaacttcagctgtgaactaagaataatacaagcccgaaatgttgaatctgtca |
563 |
Q |
| |
|
|| |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||| |
|
|
| T |
39584976 |
tatactctcaaattttcaatggatccatcccatataccagcttatgcaaacttcagctgtgaactgagaataatacaagccagaaacactgaattcatca |
39585075 |
T |
|
| Q |
564 |
agtccacgaaaaacttgtttgcaaggttgtatcttccaacaggaaacaacaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtaccctt |
663 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||| ||||||| |
|
|
| T |
39585076 |
aatccacgaaaaacttgttttcaaggttgtatcttccaacaggaaacaacaaaagaattcaactcaacagtaaaagtatttctaccaaatccctaccctt |
39585175 |
T |
|
| Q |
664 |
ttgggatgagtcttttaatctggattgttcttgcccccaagaattcttggaaaaccttaatcaacaaagcctagaggtggagctaaggcaaaggaagatg |
763 |
Q |
| |
|
|||| |||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
39585176 |
ttggaatgagtcttttaatttagattgttcatgcccccaggaattcttggacaatcttaatcaacaaagcctagtggtggagctgaggcaaaggaagatg |
39585275 |
T |
|
| Q |
764 |
tgggggtcacagcttattggcaaaggtgagattccatggaaagtgattcttgaatcacaaaacatggagct-aaaaaatggttgaaaatggaattggtga |
862 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |
|
|
| T |
39585276 |
tgggggtcacaacttattgggaaaggtgagattccatggaaagtgattcttgaatcacaaaacatggagttaaaaaaatggttgaaaatggaatttgtga |
39585375 |
T |
|
| Q |
863 |
gtagaagtgattgc-aagaggctatgttcccaacaccagaagtggaagtggaaattaaa |
920 |
Q |
| |
|
|| ||||||||||| |||||| ||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
39585376 |
gtggaagtgattgcaaagagggtatgttcacaacaacagaagtggaagtggagattaaa |
39585434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 435 - 920
Target Start/End: Complemental strand, 39566505 - 39566017
Alignment:
| Q |
435 |
aacacataattagacaaattcctaatt-gctaaactctcaatttttcaatggatccattccatatacctgcttatgcaaacttcagctgtgaactaagaa |
533 |
Q |
| |
|
|||| |||| |||||||||||||| || |||| |||||||||||||| |||||||||| ||| ||| ||||||||||||||||||| | |||||| |||| |
|
|
| T |
39566505 |
aacatataactagacaaattcctatttagctatactctcaatttttcgatggatccatcccacatatctgcttatgcaaacttcagttttgaactgagaa |
39566406 |
T |
|
| Q |
534 |
taatacaagcccgaaatgttgaatctgtcaagtccacgaaaaacttgtttgcaaggttgtatcttccaacaggaaacaacaaaagaattcaactaaacag |
633 |
Q |
| |
|
| || |||||||||||| ||||||| ||||| || ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39566405 |
tcattcaagcccgaaatattgaatccgtcaaatctacgaaaaacttatttgcaaggttatatcttccaacgggaaacaacaaaagaattcaactaaacag |
39566306 |
T |
|
| Q |
634 |
caaaagtgtttccaccaaatcagtacccttttgggatgagtcttttaatctggattgttcttgcccccaagaattcttggaaaaccttaatcaacaaagc |
733 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39566305 |
caaaagtgtttccaccaaatcagtgcccttttgggatgagtcttttaatctagattgttcttgcccccaagaattcttggaaaaccttaatcaacaaagc |
39566206 |
T |
|
| Q |
734 |
ctagaggtggagctaaggcaaaggaagatgtgggggtcacagcttattggcaaaggtgagattccatggaaagtgattcttgaatcacaaaacatggagc |
833 |
Q |
| |
|
|| | | |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39566205 |
ctggtgttggagctaaggcaaaggaagatgtgggggtcacaacttattgggaaatgtgagattccatggaaagtgattcttgaatcaaaaaacatggagt |
39566106 |
T |
|
| Q |
834 |
t-aaaaaatggttgaaaatggaattggtgagtagaagtgattgc-aagaggctatgttcccaacaccagaagtggaagtggaaattaaa |
920 |
Q |
| |
|
| |||||||||||||| ||||| ||||||||| | ||||||| | |||||| ||||||| ||| ||||||||||||||||| |||||| |
|
|
| T |
39566105 |
taaaaaaatggttgaagatggatttggtgagtggcagtgatttcaaagagggtatgttcataacgccagaagtggaagtggagattaaa |
39566017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 263 - 920
Target Start/End: Complemental strand, 39572138 - 39571495
Alignment:
| Q |
263 |
attttatattagtgctcaaggataagagctccttcatggaaagcatttccgatttaattaattacttttccacactatataatacatcacataggaaacc |
362 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| || ||||||||||| ||||| || |||| ||||||||||||||||||| || ||| |
|
|
| T |
39572138 |
attttatattagtgttcaaggataagagcagcttcctgtaaagcatttccaatttactt-------tttcaacactatataatacatcacctac--aac- |
39572049 |
T |
|
| Q |
363 |
tcaaactcaaactcaaacaaacccattaaacatattctttagctttcatttcctctctctttttctagctacaacacataattagacaaattcctaatt- |
461 |
Q |
| |
|
|| |||||||||||| |||| || ||||||||| | ||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||| | |
|
|
| T |
39572048 |
---aattcaaactcaaaccaaccttttt--catattctt-accttcaatttcctctct-tttttctagctaaaacacataactagacaaattcctaacta |
39571956 |
T |
|
| Q |
462 |
gctaaactctcaatttttcaatggatccattccatatacctgcttatgcaaacttcagctgtgaactaagaataatacaagcccgaaatgttgaatctgt |
561 |
Q |
| |
|
|||| ||||||||| ||||||||||||| |||||| ||||||||| ||| |||||||| ||||| |||||||||||||| || || | |||| | |
|
|
| T |
39571955 |
gctatactctcaataactcaatggatccatctcatataactgcttatgtaaatttcagctgcgaactgagaataatacaagctcgtaacatcgaattcat |
39571856 |
T |
|
| Q |
562 |
caagtccacgaaaaacttgtttgcaaggttgtatcttccaacaggaaacaacaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtaccc |
661 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
39571855 |
caagtccacgaagaacttatttgcaaggttgtatcttccaacaggaaacgacaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtgccc |
39571756 |
T |
|
| Q |
662 |
ttttgggatgagtcttttaatctggattgttcttgcccccaagaattcttggaaaaccttaatcaacaaagcctagaggtggagctaaggcaaaggaaga |
761 |
Q |
| |
|
|||||||| |||||||||||| | || || || ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||| |||| |
|
|
| T |
39571755 |
ttttgggacgagtcttttaatttagactgctcatgccctcaagaattcttggaaaaccttaatcaacaaagcctagtgttggagctaagacaaagaaaga |
39571656 |
T |
|
| Q |
762 |
tgtgggggtcacagcttattggcaaaggtgagattccatggaaagtgattcttgaatcacaaaacatggagct-aaaaaatggttgaaaatggaattggt |
860 |
Q |
| |
|
| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||| ||||| |
|
|
| T |
39571655 |
tatgggggtcacaacttattggcaaaggtgacattccatggaaggtgattcttgaagcacaaaacatggagttaaaaaaatggttgaaaatggatttggt |
39571556 |
T |
|
| Q |
861 |
gagtagaagtgattgc-aagaggctatgttcccaacaccagaagtggaagtggaaattaaa |
920 |
Q |
| |
|
|||| ||||||| ||| |||||| ||||||| |||||||||||||||||||| |||||| |
|
|
| T |
39571555 |
gagtggaagtgagtgcaaagagggtatgttcagtacaccagaagtggaagtggagattaaa |
39571495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 271 - 920
Target Start/End: Complemental strand, 39561935 - 39561308
Alignment:
| Q |
271 |
ttagtgctcaaggataagagctccttcatggaaagcatttccgatttaattaattacttttccacactatataatacatcacataggaaacctcaaactc |
370 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| ||||| |
|
|
| T |
39561935 |
ttagtgctcaaggataagagcagcttcctggaaagcatttccaatttac-------cttttccacactatataatgcatcacatac--aac----aactc |
39561849 |
T |
|
| Q |
371 |
aaactcaaacaaacccattaaacatattctttagctttcatttcctctctctttttctagctacaacacataattagacaaattcctaattgctaaactc |
470 |
Q |
| |
|
|||||||||| ||| ||||||| |||||||||| | ||||| ||||||| ||| |||||||| |||||| ||| | |||| || ||| |
|
|
| T |
39561848 |
aaactcaaaccaacacattaaaaatattctttaatctcaatttcatctctctattttgagctacaa-acataacaagatagattctta---------ctc |
39561759 |
T |
|
| Q |
471 |
tcaatttttcaatggatccattccatatacctgcttatgcaaacttcagctgtgaactaagaataatacaagcccgaaatgttgaatctgtcaagtccac |
570 |
Q |
| |
|
|| ||||| |||||||||||| | | |||||| |||||||||||||| |||||||| |||||||| ||||| ||||| |||||| ||||||| | |
|
|
| T |
39561758 |
tccatttt-caatggatccatcgaaaacacctgcatatgcaaacttcagttgtgaactgagaataattcaagcacgaaacattgaattcatcaagtcggc |
39561660 |
T |
|
| Q |
571 |
gaaaaacttgtttgcaaggttgtatcttccaacaggaaacaacaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtacccttttgggat |
670 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||| |||| |||||||| ||||| |||||||| |
|
|
| T |
39561659 |
aaaaaatatgtttgcaaggctgtatcttccaacaggaaacaacaaaagtattcaactcaatagcaaaaaaatttcaaccaaatccgtacctttttgggac |
39561560 |
T |
|
| Q |
671 |
gagtcttttaatctggattgttcttgcccccaagaattcttggaaaaccttaatcaacaaagcctagaggtggagctaaggcaaaggaagatgtgggggt |
770 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
39561559 |
gagtcttttaatctagattgttcttgcccccaagaattcttggaaaatcttaaccaacaaaacctagtgttggagctaaggcaaaggaagatatgggggt |
39561460 |
T |
|
| Q |
771 |
cacagcttattggcaaaggtgagattccatggaaagtgattcttgaatcacaaaacatggagct-aaaaaatggttgaaaatggaattggtgagtagaag |
869 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || | || |||||| |||| |
|
|
| T |
39561459 |
cacaacttattggaaaaggtgagattccatggaaagtgattcttgaatcacaaaacatggagttaaaaaaatggttgaagatatatttagtgagtggaag |
39561360 |
T |
|
| Q |
870 |
tgattgc-aagaggctatgttcccaacaccagaagtggaagtggaaattaaa |
920 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39561359 |
tgattgcaaagaggctatgttcccaacaccagaagtggaagtggaaattaaa |
39561308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 512 - 878
Target Start/End: Original strand, 39574830 - 39575191
Alignment:
| Q |
512 |
aacttcagctgtgaactaagaataatacaagcccgaaatgttgaatctgtcaagtccacgaaaaacttgtttgcaaggttgtatcttccaacaggaaaca |
611 |
Q |
| |
|
|||||||| |||||| | ||| |||||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39574830 |
aacttcagttgtgaattgagattaatacaagctcgaaacatcgaattcatcaagtccacgaaaaacttgtttgcaaggttgtatcttccaacaggaaaca |
39574929 |
T |
|
| Q |
612 |
acaaaagaattcaactaaacagcaaaagtgtttccaccaaatcagtacccttttgggatgagtcttttaatctggattgttcttgcccccaagaattctt |
711 |
Q |
| |
|
| |||||||||||||| ||| || ||| |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
39574930 |
ataaaagaattcaactcaacggctaaaatgtttctaccaaatcagtgcccttttgggatgaatcttttaatcttgattgttcttgtgcccaagaattctt |
39575029 |
T |
|
| Q |
712 |
ggaaaaccttaatcaacaaagcctagaggtggagctaaggcaaaggaagatgtgggggtcacagcttattggcaaaggtgagattccatggaaagtgatt |
811 |
Q |
| |
|
|| |||| ||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
39575030 |
gg------ttaaccaacaaagcctagtgttggagctaaggcaaaggaagatgtgggggtcacaacttattggaaaaggtgagattccatggaaagtgatt |
39575123 |
T |
|
| Q |
812 |
cttgaatcacaaaacatggagct-aaaaaatggttgaaaatggaattggtgagtagaagtgattgcaa |
878 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||| ||||| ||| ||||| ||||||||||||| |
|
|
| T |
39575124 |
cttgaatcacaaaacatggagttaaaaaaatggttgaagatggatttgttgagtggaagtgattgcaa |
39575191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 39580879 - 39580962
Alignment:
| Q |
8 |
ccttctagtttagtacactaaaaaccttgtttattctaatcttatacctttgggatccccagttatggaatgcagcaagatact |
91 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||| |||| ||||||||| |
|
|
| T |
39580879 |
ccttttagtttactacactaaaaaccctgtttattctcttcttatacctttggggtccccagttacggattgcatcaagatact |
39580962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 39584521 - 39584600
Alignment:
| Q |
19 |
agtacactaaaaaccttgtttattctaatcttatacctttgggatccccagttatggaatgcagcaagatactgttgatt |
98 |
Q |
| |
|
||||||||||||| || |||||| ||| |||||||||||||| |||||||||| ||| |||| |||||||| |||||| |
|
|
| T |
39584521 |
agtacactaaaaatgttttttattgtaaccttatacctttggggtccccagttagggattgcattaagatactcttgatt |
39584600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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