View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1723-Insertion-2 (Length: 149)
Name: NF1723-Insertion-2
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1723-Insertion-2 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 7e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 7e-75
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 36921701 - 36921560
Alignment:
| Q |
8 |
ctaatcaatcttttcttcataatcttgtcaaaaatatattttcttcataattcataacccacttttaattaattttattttaccctacttattaatatct |
107 |
Q |
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| T |
36921701 |
ctaatcaatcttttcttcataatcttgtcaaaaatatattttcttcataattcataacccacttttaattaattttattttaccctacttattaatatct |
36921602 |
T |
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| Q |
108 |
tgttttccccgaccagtctagtcccatcctaaccattcacaa |
149 |
Q |
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| T |
36921601 |
tgttttccccgaccagtctagtcccatcctaaccattcacaa |
36921560 |
T |
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