View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1723_high_10 (Length: 381)
Name: NF1723_high_10
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1723_high_10 |
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[»] scaffold0251 (1 HSPs) |
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[»] scaffold0110 (2 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 26)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 6 - 168
Target Start/End: Complemental strand, 25857836 - 25857671
Alignment:
Q |
6 |
aagcgtaagctagcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataa-----gggtttccgaaatctaccacaattgaga |
100 |
Q |
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|
||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||| |
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|
T |
25857836 |
aagcgtaagctagtgctaaacctaaaagataaacagaca--ttgcaagcaacaaatctatcaaataaaataagggtttccgaaatccaccacaattgaga |
25857739 |
T |
|
Q |
101 |
gaaaagtctcgaatattattattgaataaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
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|
|||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
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|
T |
25857738 |
gaaaagtctcaaatattattattgaataaaaagtgtgtctcttaggctacataagttatgcttaaata |
25857671 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 255 - 368
Target Start/End: Complemental strand, 25857559 - 25857446
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggcac |
354 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
25857559 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcgggcctttagacgacctcgaatgactaaaataacccctacgtcatggcga |
25857460 |
T |
|
Q |
355 |
aacgatgtgttttg |
368 |
Q |
|
|
| |||||||||||| |
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|
T |
25857459 |
agcgatgtgttttg |
25857446 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 41218834 - 41218684
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
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|
||||||||| |||||||||||| | | | |||| |||||||||||||||||||||||| |||||| |||| |||| |||||||||||||||||||||||| |
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|
T |
41218834 |
agcgctaaatctaaaagataaatagataggttgtaagcgacaaacctatcaaataaggctttccggaatccaccagaattgagagaaaagtctcgaatat |
41218735 |
T |
|
Q |
117 |
tattattgaataaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||||||| |||||||| ||||||||||| |||||||| |||||||||| |
|
|
T |
41218734 |
tattattgaat-aaaagtgtgtctcttaggctccataagttctgcttaaata |
41218684 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 3063824 - 3063942
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
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|
|||||||||||||||||||||||| ||||||||| || |||| |||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||| |
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|
T |
3063824 |
gttgcaagcgacaaacctatcaaaataagggttttcggaatcaaccagaattgagagaaaagtctcgaatattattaatgaat-aaaagtgtacctctta |
3063922 |
T |
|
Q |
145 |
ggctgcataagttatgctta |
164 |
Q |
|
|
|||| ||||||||||||||| |
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|
T |
3063923 |
ggctacataagttatgctta |
3063942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 4580593 - 4580476
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| | |||| || | ||||||||||||| |||||||||| |
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|
T |
4580593 |
agcgctaaacctaaaagataaacacacaggttgcaagcgacaaacctatcaaataagggttttcagaatccactagaattgagagaaaattctcgaatat |
4580494 |
T |
|
Q |
117 |
tattattgaataaaaagtg |
135 |
Q |
|
|
| ||||||||| ||||||| |
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|
T |
4580493 |
t-ttattgaatgaaaagtg |
4580476 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 19950033 - 19949883
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| | |||| | || |||||||||||||||||| ||||| |
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|
T |
19950033 |
agcgctaaacctaaaagataaacagataagttgcaagcgacaaacttatcaaataagggtttttggaatccatcagaattgagagaaaagtctctaatat |
19949934 |
T |
|
Q |
117 |
tattattgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
| ||||| ||| | |||||| ||||||||||||||||||| || ||||||| |
|
|
T |
19949933 |
ttttattcaatgataaagtg--actcttaggctgcataagttctgtttaaata |
19949883 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 43304047 - 43304163
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| || ||||||| |
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|
T |
43304047 |
gttgcaagcgacaaacctattaaaataagggtttccgaaatccaccagaattgagagaaaagtctcgaatattattaatgaataaaa---gtgtctctta |
43304143 |
T |
|
Q |
145 |
ggctgcataagttatgctta |
164 |
Q |
|
|
|||| |||||||| |||||| |
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|
T |
43304144 |
ggctacataagttctgctta |
43304163 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 53013025 - 53012910
Alignment:
Q |
49 |
gcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttaggc |
147 |
Q |
|
|
||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |
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|
T |
53013025 |
gcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaagtctcgaatattattaatgaat-aaaagtgtgcctcttaggc |
53012927 |
T |
|
Q |
148 |
tgcataagttatgctta |
164 |
Q |
|
|
| ||| ||||||||||| |
|
|
T |
53012926 |
tacattagttatgctta |
53012910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 3068962 - 3069080
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||| ||||||||||||| ||||| |||||||| ||||| |
|
|
T |
3068962 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccaaaattgagagaaaagtatcgaatattattaatgaat-aaaagtgtgcatctta |
3069060 |
T |
|
Q |
145 |
ggctgcataagttatgctta |
164 |
Q |
|
|
|||| ||||||||||||||| |
|
|
T |
3069061 |
ggctacataagttatgctta |
3069080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 43306759 - 43306877
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
T |
43306759 |
gttgcaagcgacaaacctatcaaaataagggtttccgtaatccaccagaattgagagaaaagtcttgaatattattaatgaat-aaaagtgtgcctctta |
43306857 |
T |
|
Q |
145 |
ggctgcataagttatgctta |
164 |
Q |
|
|
|||| |||||||| |||||| |
|
|
T |
43306858 |
ggctacataagttctgctta |
43306877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 20398458 - 20398573
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||| || |||| |||| |||||||| ||||||||||||||| |
|
|
T |
20398458 |
agcgctaaacctaaaagataatcagacaggttgcaagcgacaagtctatcaaataagggttttcggaatccaccagaattgagaaaaaagtctcgaatat |
20398557 |
T |
|
Q |
117 |
tattattgaataaaaa |
132 |
Q |
|
|
| || || |||||||| |
|
|
T |
20398558 |
ttttcttaaataaaaa |
20398573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 39913298 - 39913438
Alignment:
Q |
28 |
taaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat |
127 |
Q |
|
|
||||||||||||| | | ||| ||| ||||||||||||||||| || |||| |||| |||| ||||| ||||||||||||||||||| ||||||||| |
|
|
T |
39913298 |
taaaagataaacacatatattgtaagtgacaaacctatcaaatagaggggtccggaatccaccagaattgggagaaaagtctcgaatatttttattgaat |
39913397 |
T |
|
Q |
128 |
aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
|||| ||| ||||||||||||||||||| || ||||||| |
|
|
T |
39913398 |
caaaaatgtgcctcttaggctgcataagttctgtttaaata |
39913438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 368
Target Start/End: Original strand, 39913484 - 39913596
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggcac |
354 |
Q |
|
|
||||||||||||| |||||||||| ||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||| || | | |||||||| |
|
|
T |
39913484 |
aacaaaatagaaaattctagaaaa-tgctgaaatattaaaaggtggtttcgagccttcagacgacctcgaatgactaaaataaaccattcatcatggcaa |
39913582 |
T |
|
Q |
355 |
aacgatgtgttttg |
368 |
Q |
|
|
| ||||||||||| |
|
|
T |
39913583 |
agtgatgtgttttg |
39913596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 5128911 - 5128820
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgt |
136 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | ||||||||| ||||||||| |
|
|
T |
5128911 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagtgt |
5128820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 33620071 - 33620215
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattatt |
120 |
Q |
|
|
|||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||| ||||| ||||| || |
|
|
T |
33620071 |
ctaaacctaaaa--taaacagacaatctgcaagcgcaaaacctatcaaataagggtttccagaatcctccagaattgagagaaaaatctcg-atattttt |
33620167 |
T |
|
Q |
121 |
attgaataaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||| |||| | |||||||||||| ||||||| || ||||||| |
|
|
T |
33620168 |
attgaattaaaaagatgtctcttaggctgtataagttttgtttaaata |
33620215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 40593502 - 40593598
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaata |
115 |
Q |
|
|
||||||||||| |||| | ||||| || ||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||||| ||||||||| |
|
|
T |
40593502 |
agcgctaaaccaaaaaaa-aaacagacgggttgcaagcgacaaacctatcaaataagggttttcggaatccaccaaaattgagagaaaa-tctcgaata |
40593598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 4580395 - 4580312
Alignment:
Q |
258 |
aaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccc |
341 |
Q |
|
|
|||||||||| ||||||||| ||| |||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |
|
|
T |
4580395 |
aaaatagaaaattctagaaatatgttgaaatattaaaaggcggtttcgggccttcatacgacctcgaatgactaatttaacccc |
4580312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 25340146 - 25340224
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||| | |||| | || |||||||| |
|
|
T |
25340146 |
taaacctaaaagataaacagacaggttgcacgcaacaaacctatcaaataagggtttctggaatccatcataattgaga |
25340224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 33620291 - 33620356
Alignment:
Q |
285 |
aaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatgg |
351 |
Q |
|
|
|||||||||||||||||||| |||||| |||| |||| |||||| ||||||||||||||| |||||| |
|
|
T |
33620291 |
aaatattaaaaggcggtttcgggccttcagactacct-gaatgattaaaataacccctacatcatgg |
33620356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 20398687 - 20398755
Alignment:
Q |
285 |
aaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
|||||||||||||||||||| || | | | |||||||||||||||||||||||| | ||| |||||||| |
|
|
T |
20398687 |
aaatattaaaaggcggtttcgggtcatcaaacgacctcgaatgactaaaataactcatacttcatggca |
20398755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 40594023 - 40594086
Alignment:
Q |
286 |
aatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcat |
349 |
Q |
|
|
||||||||||||||||||| |||||| || |||| |||||||||||||||||||||| |||| |
|
|
T |
40594023 |
aatattaaaaggcggtttcgggccttatgattacctggaatgactaaaataacccctacatcat |
40594086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 41218638 - 41218589
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttc |
304 |
Q |
|
|
||||||||||||| |||||||||| || | |||||||||||||||||||| |
|
|
T |
41218638 |
aacaaaatagaaaattctagaaaagtgtagaaatattaaaaggcggtttc |
41218589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 1151221 - 1151120
Alignment:
Q |
28 |
taaaagataaacaaacaagtt-gcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaa |
126 |
Q |
|
|
||||||||||||| ||||||| |||||| ||||||||||||| |||||||| || |||| |||| |||| |||||||||||| | ||| |||||||| |
|
|
T |
1151221 |
taaaagataaacagacaagtttgcaagcaacaaacctatcaa--aagggttttcggaatccaccagaatt--gagaaaagtctctataatttttattgaa |
1151126 |
T |
|
Q |
127 |
taaaaa |
132 |
Q |
|
|
| |||| |
|
|
T |
1151125 |
tgaaaa |
1151120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 19999345 - 19999439
Alignment:
Q |
258 |
aaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
|||||||||| ||||||| | ||| |||||||||||| || |||| |||||| ||||||| || |||||| ||||| ||| ||||||||||||| |
|
|
T |
19999345 |
aaaatagaaaaatctagaata-tgcttaaatattaaaatgctgttttcggccttcagacgacttcaaatgaccaaaatcaccactacgtcatggca |
19999439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 19795244 - 19795148
Alignment:
Q |
55 |
gacaaacctat-caaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttaggctgcata |
153 |
Q |
|
|
||||||||||| ||||||||| || ||||||| |||| |||| |||||||| ||| ||||| | |||||||||||||| | | |||||||||||||||| |
|
|
T |
19795244 |
gacaaacctatgcaaataagg--ttacgaaatccaccaaaatttagagaaaa-tctggaataattttattgaataaaaaat-tgtctcttaggctgcata |
19795149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 1697061 - 1697109
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatca |
67 |
Q |
|
|
|||||||| | ||||||||| | ||| |||||||||||||||||||||| |
|
|
T |
1697061 |
cgctaaacatgaaagataaatagacaggttgcaagcgacaaacctatca |
1697109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 89; Significance: 8e-43; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 31577241 - 31577391
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |
|
|
T |
31577241 |
agcgctaaacctaaaagataaacagataggttgcaagcgacaaacctatcaaataagggtttccgaaatccaccagaattgagagaaaagtcttgaatat |
31577340 |
T |
|
Q |
117 |
tattattgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
| ||||||||| ||||||| || |||||||| |||||||||| || ||||||| |
|
|
T |
31577341 |
ttttattgaatgaaaaagt-tc-ctcttaggttgcataagttttgtttaaata |
31577391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 4303481 - 4303341
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcg-acaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaata |
115 |
Q |
|
|
|||||||||||||||||||||| | ||| |||||||||| |||||||||| |||||||||||| || |||| || | ||||||||||||| ||||||||| |
|
|
T |
4303481 |
agcgctaaacctaaaagataaagagacaggttgcaagcgaacaaacctattaaataagggttttcggaatccactagaattgagagaaaa-tctcgaata |
4303383 |
T |
|
Q |
116 |
ttattattgaat-aaaaagtgtctctcttaggctgcataagt |
156 |
Q |
|
|
| ||||||||| ||||||||| |||||||||| ||||||| |
|
|
T |
4303382 |
attttattgaatcaaaaagtgtgcctcttaggctacataagt |
4303341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 5678275 - 5678420
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattatt |
120 |
Q |
|
|
|||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| | || |||| ||||||||||||||||||||||| | || |
|
|
T |
5678275 |
ctaaacttaaaagataaacagacaggttacaagcgacaaacctatcaaataaggg-ttcacatatacaccagaattgagagaaaagtctcgaataatttt |
5678373 |
T |
|
Q |
121 |
attgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||| |||||||| ||||||| |||||||||||| || ||||||| |
|
|
T |
5678374 |
attgaatgaaaaagtg--tctcttaagctgcataagttctgtttaaata |
5678420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 5703327 - 5703472
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattatt |
120 |
Q |
|
|
|||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| | || |||| ||||||||||||||||||||||| | || |
|
|
T |
5703327 |
ctaaacttaaaagataaacagacaggttacaagcgacaaacctatcaaataaggg-ttcacatatacaccagaattgagagaaaagtctcgaataatttt |
5703425 |
T |
|
Q |
121 |
attgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||| |||||||| ||||||| |||||||||||| || ||||||| |
|
|
T |
5703426 |
attgaatgaaaaagtg--tctcttaagctgcataagttctgtttaaata |
5703472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 4668229 - 4668374
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattatta |
121 |
Q |
|
|
||||||||||||||||||| | | | || ||||||||||||||| |||||||||||||| |||| ||| |||| |||||||||||||||||||| || |
|
|
T |
4668229 |
taaacctaaaagataaacagaaaggatgtaagcgacaaacctattaaataagggtttccataatccacctgaattaagagaaaagtctcgaatatttttt |
4668328 |
T |
|
Q |
122 |
ttgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
|| ||| |||||||| |||||||||||||||||||||| ||||||| |
|
|
T |
4668329 |
ttcaatgaaaaagtg--cctcttaggctgcataagttatgtttaaata |
4668374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 859243 - 859357
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||||||| ||| |||||||| |||| |||| |||||||||||||||||| |||||||||| ||||| |||||||| | ||| |
|
|
T |
859243 |
gttgcaagcgacaaacctatcaaaataaaggtttccggaatccaccagaattgagagaaaagtctcaaatattattaatgaat-aaaagtgtgcatttta |
859341 |
T |
|
Q |
145 |
ggctgcataagttatg |
160 |
Q |
|
|
|||| ||||||||||| |
|
|
T |
859342 |
ggctacataagttatg |
859357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 1217247 - 1217361
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||||||| ||| |||||||| |||| |||| |||||||||||||||||| |||||||||| ||||| |||||||| | ||| |
|
|
T |
1217247 |
gttgcaagcgacaaacctatcaaaataaaggtttccggaatccaccagaattgagagaaaagtctcaaatattattaatgaat-aaaagtgtgcatttta |
1217345 |
T |
|
Q |
145 |
ggctgcataagttatg |
160 |
Q |
|
|
|||| ||||||||||| |
|
|
T |
1217346 |
ggctacataagttatg |
1217361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 22572447 - 22572530
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||| || | |||||||| |
|
|
T |
22572447 |
agcgctaaacctaaaagataaacagacaggttgcaagcgacaaatctatcaaataagggtttccggaatccacaagaattgaga |
22572530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 32053071 - 32052989
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
|||||||||||||||||||||||| |||| |||||||||||||| || ||||| |||||||||||||||| |||| |||||||| |
|
|
T |
32053071 |
agcgctaaacctaaaagataaacagacaatttgcaagcgacaaatctgtcaaa-aagggtttccgaaatccaccagaattgaga |
32052989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 5678460 - 5678557
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||||||||| | |||| |||||| |||||| |||| ||||||||||||| |||||| |||||||| |
|
|
T |
5678460 |
aacaaaatagaaagttctagaaaa-tgctgaaatattaaaaggtgatttcgggccttcagacgatctcggatgactaaaataatccctacatcatggca |
5678557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 5703512 - 5703609
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||||||||| | |||| |||||| |||||| |||| ||||||||||||| |||||| |||||||| |
|
|
T |
5703512 |
aacaaaatagaaagttctagaaaa-tgctgaaatattaaaaggtgatttcgggccttcagacgatctcggatgactaaaataatccctacatcatggca |
5703609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 13882773 - 13882890
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| |||| |||| | ||||||||| |||||||| |||||| |
|
|
T |
13882773 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcaaataattttattgaatcaaaaagtg--tctctt |
13882869 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
||| | |||||||| |||||| |
|
|
T |
13882870 |
aggatacataagttctgctta |
13882890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 13886276 - 13886370
Alignment:
Q |
47 |
ttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctct |
140 |
Q |
|
|
|||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||| |||||||| | ||||||||| ||||||||||||| |
|
|
T |
13886276 |
ttgcaagcgacaaacctatcaaaataagggtttccagaatccaccataattgagagaaaa-tctcgaatgattttattgaatcaaaaagtgtctct |
13886370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 32936824 - 32936902
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
||||||||| || |||||||||||||||||||| ||||| | |||||||||||||| || |||| |||| |||||||| |
|
|
T |
32936824 |
taaacctaagagctaaacaaacaagttgcaagcaacaaatatgtcaaataagggttttcggaatccaccataattgaga |
32936902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 8e-40; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 19677189 - 19677339
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||| ||||||||||||||| | | |||||||||||||||||| |||||||||||||| || |||| |||| |||||||||||||||||||||||| |
|
|
T |
19677189 |
agcgctaagcctaaaagataaacagataggttgcaagcgacaaacctttcaaataagggttttcggaatccaccagaattgagagaaaagtctcgaatat |
19677288 |
T |
|
Q |
117 |
tattattgaataaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
| |||||||||| ||||||| |||||||| |||||||||| || ||||||| |
|
|
T |
19677289 |
t-ttattgaatacaaagtgtgcctcttaggatgcataagttctgtttaaata |
19677339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 19677386 - 19677477
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtc |
347 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||| |
|
|
T |
19677386 |
aacaaaatagaaagttctagaaaaa-gctgaaatattaaaaggcggtttcggcccttcagacgacctaaaatgactaaaataacccctacgtc |
19677477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 40778873 - 40778992
Alignment:
Q |
46 |
gttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
||||||||||||||||||||| ||||||||||||| | |||| |||| ||||||||||||| ||||||||| | ||||||||| ||||||||| ||||| |
|
|
T |
40778873 |
gttgcaagcgacaaacctatcaaaataagggtttctggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagtgtgcctctt |
40778971 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
|| || |||||||| |||||| |
|
|
T |
40778972 |
agactacataagttctgctta |
40778992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 35160790 - 35160848
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttc |
79 |
Q |
|
|
|||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |
|
|
T |
35160790 |
ctaaacctaaaagataaacagacaagttgcaaacgacaaacctgtcaaataagggtttc |
35160848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 15385013 - 15385082
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatc |
86 |
Q |
|
|
|||| ||||| ||||||||||||| |||||| |||||||||||| || | ||||||| |||||||||||| |
|
|
T |
15385013 |
agcgttaaacttaaaagataaacagacaagtcgcaagcgacaaatctgttaaataagagtttccgaaatc |
15385082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7775442 - 7775386
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggttt |
78 |
Q |
|
|
||||||||||||||||||| ||||||||||||| |||||||| ||||| || ||||| |
|
|
T |
7775442 |
taaacctaaaagataaacagacaagttgcaagctacaaacctgtcaaaaaaaggttt |
7775386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 14504149 - 14504086
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttcc |
80 |
Q |
|
|
|||| |||||||| |||||||| |||||||||||||| |||||||| ||||||||| |||||| |
|
|
T |
14504149 |
agcgttaaacctagaagataaaacaacaagttgcaagcaacaaacctgtcaaataagagtttcc |
14504086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 36844394 - 36844450
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggttt |
78 |
Q |
|
|
||||||||| |||||| || |||| ||| ||| ||||||||| |||||||||||||| |
|
|
T |
36844394 |
taaacctaagagataatcagacaaattgtaagtgacaaacctgtcaaataagggttt |
36844450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 2053083 - 2053216
Alignment:
Q |
34 |
ataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaag |
133 |
Q |
|
|
||||||| ||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||| |||||||||||||| | ||||||||| || | |
|
|
T |
2053083 |
ataaacagacaagttgcaagcgacaaatctatcaaataagggtttccgaaatccactagaattgaggaaaaagtctcgaataattttattgaatgaata- |
2053181 |
T |
|
Q |
134 |
tgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
|||||||||||||||||||||||||| ||||||| |
|
|
T |
2053182 |
agtctctcttaggctgcataagttatgtttaaata |
2053216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 13085150 - 13085286
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaata |
115 |
Q |
|
|
||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| || |||| |||| ||||||||||||| ||||||||| |
|
|
T |
13085150 |
agcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccaccaaaattgagagaaaa-tctcgaata |
13085248 |
T |
|
Q |
116 |
ttattattgaataaaaagtgtctctcttaggctgcataa |
154 |
Q |
|
|
| |||||||||||||| || ||||||||||||||||| |
|
|
T |
13085249 |
attttattgaataaaaa-agtgtctcttaggctgcataa |
13085286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 4053157 - 4053028
Alignment:
Q |
37 |
aacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgt |
136 |
Q |
|
|
|||||||| || |||||||||||||||||||| ||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||| | |
|
|
T |
4053157 |
aacaaacatgtagcaagcgacaaacctatcaagtaaggattttcgaaatccaccataattgagagaaaagtctcgaatatttttattgaatgaaaagag- |
4053059 |
T |
|
Q |
137 |
ctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||||| |||||||||| || ||||||| |
|
|
T |
4053058 |
-tctcttaggttgcataagttttgtttaaata |
4053028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 22716686 - 22716574
Alignment:
Q |
20 |
gctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataa-gggtttccgaaatctaccacaattgagagaaaagtctcgaatatta |
118 |
Q |
|
|
||||||||||||| |||||| ||| |||||||||||||||||||||||| || ||||||||| |||| |||| |||||||||||||||||||||||||| |
|
|
T |
22716686 |
gctaaacctaaaatataaactgacaggttgcaagcgacaaacctatcaaaaaaagggtttccggaatccaccagaattgagagaaaagtctcgaatatta |
22716587 |
T |
|
Q |
119 |
ttattgaataaaa |
131 |
Q |
|
|
||| ||||||||| |
|
|
T |
22716586 |
ttaatgaataaaa |
22716574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 22988531 - 22988643
Alignment:
Q |
20 |
gctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatatta |
118 |
Q |
|
|
|||||| ||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |
|
|
T |
22988531 |
gctaaatctaaaagataaactgacaggttgcaagcgacaaacctatcgaaaaaagggtttccggaatccaccagaattgagagaaaagtctcgaatatta |
22988630 |
T |
|
Q |
119 |
ttattgaataaaa |
131 |
Q |
|
|
||| ||||||||| |
|
|
T |
22988631 |
ttaatgaataaaa |
22988643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 9596972 - 9596857
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||||||||| | ||| ||||||| ||| ||||||||||||||||||||||| |||| |||| |||||||||||||||||| ||||| |
|
|
T |
9596972 |
agcgctaaacctaaaagataaaaagacaggttgcaaacgataaacctatcaaataagggtttccataatccaccagaattgagagaaaagtctcaaatat |
9596873 |
T |
|
Q |
117 |
tattattgaataaaaa |
132 |
Q |
|
|
| ||||||||| |||| |
|
|
T |
9596872 |
tcttattgaatgaaaa |
9596857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 22691312 - 22691195
Alignment:
Q |
47 |
ttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttag |
145 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||| ||||||| |
|
|
T |
22691312 |
ttgcaagcgacaaacctatcgaaataagggtttccggaatccaccagaattgagagaaaagtcttgaatattattaatgaat-aaaagtgtgcctcttag |
22691214 |
T |
|
Q |
146 |
gctgcataagttatgctta |
164 |
Q |
|
|
||| |||||||| |||||| |
|
|
T |
22691213 |
gctacataagttctgctta |
22691195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 38223089 - 38223235
Alignment:
Q |
20 |
gctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattat |
119 |
Q |
|
|
||||||||||||||||||| | | | | ||||| ||||||||||||||||||||||||| | |||| || | |||| |||||||||||||| ||| | |
|
|
T |
38223089 |
gctaaacctaaaagataaatagataggctgcaaacgacaaacctatcaaataagggtttacagaatccactagaatt--gagaaaagtctcgataatttt |
38223186 |
T |
|
Q |
120 |
tattgaataaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
|||||||| |||| || ||||||||| ||||||||||||| ||||||| |
|
|
T |
38223187 |
tattgaatgaaaaaagtgtctcttaggttgcataagttatgtttaaata |
38223235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 6659417 - 6659535
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | ||| ||||| ||||||| | ||||| |
|
|
T |
6659417 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaatagttttagtgaatcaaaaagt-tgcctctt |
6659514 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
||||| |||||||| |||||| |
|
|
T |
6659515 |
aggctacataagttctgctta |
6659535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 19684792 - 19684855
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttcc |
80 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |
|
|
T |
19684792 |
agcgctaaacctaaaagataaacagacagtttgcaagcgacaaacctatcaaacaagggtttcc |
19684855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 54239635 - 54239554
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
|||||||||||| || |||||| ||||||| |||| |||||||||||||||||||||||| || |||| |||| |||||||| |
|
|
T |
54239635 |
cgctaaacctaagaggtaaacagacaagttacaagggacaaacctatcaaataagggttttcggaatccaccaaaattgaga |
54239554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 34949082 - 34949162
Alignment:
Q |
51 |
aagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaa |
131 |
Q |
|
|
|||||| |||||||| |||| |||||||| |||||| ||| | ||||||||||||||||||||||| ||||||||||||| |
|
|
T |
34949082 |
aagcgataaacctattaaattagggtttctgaaatccacccgatttgagagaaaagtctcgaatatttttattgaataaaa |
34949162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 2880221 - 2880170
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaa |
69 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
T |
2880221 |
agcgctaaacctaaaagataaacaaacaagttgcaagc-acaaacctgtcaaa |
2880170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 24667637 - 24667566
Alignment:
Q |
98 |
agagaaaagtctcgaatattattattgaataaaaagtgtctctcttaggctgcataagttatgcttaaataa |
169 |
Q |
|
|
|||||||||||||||||||||||| |||| |||||||| |||||||||| |||||||| |||||| |||| |
|
|
T |
24667637 |
agagaaaagtctcgaatattattaatgaaataaaagtgtgcctcttaggctacataagttctgcttatataa |
24667566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 38223311 - 38223376
Alignment:
Q |
285 |
aaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatg |
350 |
Q |
|
|
||||||||||| | ||||| |||||| |||| |||||||||||||||| | |||||||||||||| |
|
|
T |
38223311 |
aaatattaaaatgaggttttgggccttcagacaacctcgaatgactaaattcacccctacgtcatg |
38223376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 4052948 - 4052884
Alignment:
Q |
289 |
attaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
||||||||| |||||| || ||| ||| ||||| ||||||||||||||| || |||| ||||||| |
|
|
T |
4052948 |
attaaaaggtggtttcgggtcttcagatgacctagaatgactaaaataatccatacggcatggca |
4052884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 8781543 - 8781408
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||| ||||||||| |
|
|
T |
8781543 |
agcgctaaacctaaaagataaacagacaggttgcaagcgacaaacctatcaaataagggttt-cgaaatccaccagaattgagagtaaa-tctcgaataa |
8781446 |
T |
|
Q |
117 |
tattattgaataaaaagtgtctctcttaggctgcataa |
154 |
Q |
|
|
| ||||||||| |||| || |||||||||||||||| |
|
|
T |
8781445 |
ttttattgaatgaaaaaagtgcctcttaggctgcataa |
8781408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 2155968 - 2155851
Alignment:
Q |
47 |
ttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttag |
145 |
Q |
|
|
||||||||||||||||||||||| ||||||||| || |||| | || ||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |
|
|
T |
2155968 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcagaattgagagaaaagtcttgaatattattattgaat-aaaagtgtgtctcttag |
2155870 |
T |
|
Q |
146 |
gctgcataagttatgctta |
164 |
Q |
|
|
|||||||||||| |||||| |
|
|
T |
2155869 |
gctgcataagttctgctta |
2155851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 22011438 - 22011316
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaa---aagtgtctctc |
141 |
Q |
|
|
|||| ||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||| |||| |||| |
|
|
T |
22011438 |
gttggaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaagtctcgaatattattaatgaataaataaaagtcggtctc |
22011339 |
T |
|
Q |
142 |
ttaggctgcataagttatgctta |
164 |
Q |
|
|
||||||| |||||||| |||||| |
|
|
T |
22011338 |
ttaggctacataagttttgctta |
22011316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 27956241 - 27956360
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||| ||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | ||||||||| ||||||||| ||||| |
|
|
T |
27956241 |
gttgcaagcgacaaacctatgaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagtgtgcctctt |
27956339 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
||||| |||||||| |||||| |
|
|
T |
27956340 |
aggctacataagttctgctta |
27956360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 27952405 - 27952524
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||| | ||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | ||||||||| ||||||||| ||||| |
|
|
T |
27952405 |
gttgcaagcgacaaacctttgaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaagtgtgcctctt |
27952503 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
||||| |||||||| |||||| |
|
|
T |
27952504 |
aggctacataagttctgctta |
27952524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 2165924 - 2165814
Alignment:
Q |
47 |
ttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttag |
145 |
Q |
|
|
|||||||| |||||| ||||||| ||| |||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |
|
|
T |
2165924 |
ttgcaagcaacaaacttatcaaaataaatgttttcagaatccaccaaaattgagagaaaagtctcgaatattattaatgaataaaaa-tgtgtctcttag |
2165826 |
T |
|
Q |
146 |
gctgcataagtt |
157 |
Q |
|
|
|||||||||||| |
|
|
T |
2165825 |
gctgcataagtt |
2165814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 18725654 - 18725802
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatatta |
118 |
Q |
|
|
|||||||| ||||||||||||| ||| | ||||||||||||||||||||||||| |||||| | | || || | |||| |||||||||| || |||| | |
|
|
T |
18725654 |
cgctaaacttaaaagataaacagacaggctgcaagcgacaaacctatcaaataaaggtttctggattccactaaaattaagagaaaagtttcaaataatt |
18725753 |
T |
|
Q |
119 |
ttattgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||||| |||||||| |||||||| | ||||||||| || ||||||| |
|
|
T |
18725754 |
ttattgaatgaaaaagtg--tctcttagaccgcataagttttgtttaaata |
18725802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 44675286 - 44675385
Alignment:
Q |
23 |
aaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagag-aaaagtctcgaatattatta |
121 |
Q |
|
|
|||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||| || |||| |||| ||||||||| |||||| ||||||| ||||| |
|
|
T |
44675286 |
aaacataaaagataaacagacaggttgcaagcgacatacctatcaaataagggttttcggaatccaccagaattgagagaaaaagtttcgaatactatta |
44675385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 22264465 - 22264315
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||| ||||||||| ||||||| | ||| |||||||| |||||||||||| ||||| |||||| |||| | || |||||||| |||| ||||||||| |
|
|
T |
22264465 |
agcgttaaacctaatagataaagagacaggttgcaagagacaaacctatcgaataaaggtttctagaatccatcagaattgagataaaa-tctcgaataa |
22264367 |
T |
|
Q |
117 |
tattattgaat-aaaaagtgtctctcttaggctgcataa-gttatgcttaaata |
168 |
Q |
|
|
| ||||||||| |||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
22264366 |
ttttattgaatcaaaaagtg--cctcttaggctgcataatgttatgcttaaata |
22264315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 5841332 - 5841251
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||||||||| ||||| | |||||| || |||| || | |||||||| |
|
|
T |
5841332 |
cgctaaacctaaaagataaacatacaagttgcaagcgacaaacctgtcaaacaggggttttcggaatccacaagaattgaga |
5841251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 18725852 - 18725946
Alignment:
Q |
258 |
aaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
||||||||||||||||||| | ||| |||||||||||||||||||| |||||| |||||| ||||||| |||||| ||||| || | |||||||| |
|
|
T |
18725852 |
aaaatagaaagttctagaata-tgctgaaatattaaaaggcggtttcgggccttcagacgatctcgaattactaaattaacctctgcatcatggca |
18725946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 33655630 - 33655526
Alignment:
Q |
46 |
gttgcaagcgacaaacctatc-aaataagggtttccgaaatctacca-caattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctct |
142 |
Q |
|
|
||||||| ||||||||||||| ||||||||||||||| |||| |||| ||||||||||||| ||||||||| | ||||||||| ||||||||| |||| |
|
|
T |
33655630 |
gttgcaaacgacaaacctatcaaaataagggtttccggaatccaccagaaattgagagaaaa-tctcgaataattttattgaatgaaaaagtgtgcctct |
33655532 |
T |
|
Q |
143 |
taggct |
148 |
Q |
|
|
|||||| |
|
|
T |
33655531 |
taggct |
33655526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 31636339 - 31636228
Alignment:
Q |
46 |
gttgcaagcgacaaacctatc-aaataagggtttccgaaatctacca-caattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctt |
143 |
Q |
|
|
||||||||||||||||||||| ||||||||| ||||| |||| |||| ||||||||||||| ||| ||||||||||| |||||||||| | |||||| |
|
|
T |
31636339 |
gttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tcttgaatattattaatgaataaaaaagttgtctctt |
31636242 |
T |
|
Q |
144 |
aggctgcataagtt |
157 |
Q |
|
|
|||| |||||||| |
|
|
T |
31636241 |
cggctacataagtt |
31636228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 31634105 - 31633995
Alignment:
Q |
47 |
ttgcaagcgacaaacctatc-aaataagggtttccgaaatctacca-caattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||| |||||||||||| || |||| |||| ||||||||||||| |||| |||||||||| |||||||||| | ||||| |
|
|
T |
31634105 |
ttgcaagcgacaaacctatcaaaataagggttt-cggaatccaccagaaattgagagaaaa-tctcaaatattattaatgaataaaaaagttgcctcttc |
31634008 |
T |
|
Q |
145 |
ggctgcataagtt |
157 |
Q |
|
|
||||||||||||| |
|
|
T |
31634007 |
ggctgcataagtt |
31633995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 8781340 - 8781262
Alignment:
Q |
260 |
aatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataaccc |
340 |
Q |
|
|
|||||||||||||||||| | | ||||||||||||| |||||| |||||| | |||||||||||| ||||||||||||| |
|
|
T |
8781340 |
aatagaaagttctagaaatttcta-aaatattaaaaggaggtttc-ggccttcaaacgacctcgaataactaaaataaccc |
8781262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 29340897 - 29341012
Alignment:
Q |
50 |
caagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttaggct |
148 |
Q |
|
|
|||||||||||||||||||| ||| |||||||| |||| || | ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| |
|
|
T |
29340897 |
caagcgacaaacctatcaaaataaaggtttccggaatccactagaattgagagaaaagtctcgaatattattaatgaataaaaagtgtttgtcttaggct |
29340996 |
T |
|
Q |
149 |
gcataagttatgctta |
164 |
Q |
|
|
||||||||| |||||| |
|
|
T |
29340997 |
gcataagttctgctta |
29341012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 2939946 - 2940043
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||| |
|
|
T |
2939946 |
aacaaaatagaaagttcta-aaaaatgcaaaaatactaaaaggcggtttcgggccttcagacgacctcgactgactaaaataacccctacatcatggca |
2940043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 2939768 - 2939900
Alignment:
Q |
34 |
ataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaa |
132 |
Q |
|
|
||||||| ||| ||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||||||| | | ||||||| ||||||||| ||||| |
|
|
T |
2939768 |
ataaacagacatgttgcaagcgacaaacctatcaaataa-ggttttcgaaatccaccataattgagagaaattttttgaatatt-ttattgaatgaaaaa |
2939865 |
T |
|
Q |
133 |
gtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||| ||||||||||||||||||| |||||||||| |
|
|
T |
2939866 |
gtgtc-ctcttaggctgcataagttctgcttaaata |
2939900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 3565763 - 3565618
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatatta |
118 |
Q |
|
|
|||||||| |||||||||| |||| |||| |||||| |||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||| |
|
|
T |
3565763 |
cgctaaacttaaaagataac--aacaggttgtaagcgataaacctatcaaataagagtttccaaaatccaccagaattgagagaaaagtctcgaatattt |
3565666 |
T |
|
Q |
119 |
ttattgaataaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
||||||||| ||||||| ||||| |||| |||||||| || ||||||| |
|
|
T |
3565665 |
ttattgaatgaaaagtg--cctctttggctacataagttctgtttaaata |
3565618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 11190524 - 11190408
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattatt |
120 |
Q |
|
|
|||||||||||| ||||| | ||| ||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||||| ||||||||| | || |
|
|
T |
11190524 |
ctaaacctaaaatataaagagacaggttgcaagcgacaaacctatcaaataa-ggtttccggaatccaccagaattgagagaaaa-tctcgaataatttt |
11190427 |
T |
|
Q |
121 |
attgaat-aaaaagtgtct |
138 |
Q |
|
|
||||||| ||||||||||| |
|
|
T |
11190426 |
attgaatcaaaaagtgtct |
11190408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 19232160 - 19232062
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
|||||||||||||||||||||||| | || ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| | ||||||||| |
|
|
T |
19232160 |
aacaaaatagaaagttctagaaaattacagaaatattaaaaggcgatttcgagccttcagacgacctcgaatgactaaaataacccatgtgtcatggca |
19232062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 2339110 - 2339246
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||| |||||| ||| | ||||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |
|
|
T |
2339110 |
agcgctaaacctaaaa--taaacagacaggctgcaagc-acaaatctatcaaataagggtttccgaaatccaccagaattgagagaaaagtctcg-ataa |
2339205 |
T |
|
Q |
117 |
tattattgaataaaaagtgtctctcttaggctgcataagtt |
157 |
Q |
|
|
| ||||||||| |||| | ||||||||||||||||||| |
|
|
T |
2339206 |
ttttattgaatgaaaaagatgcctcttaggctgcataagtt |
2339246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 3536036 - 3535919
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaa-ttgagagaaaagtctcgaatattattattgaataaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||| ||| |||| |||| || ||||||||||| ||||||||||||||| ||||||||| |||| ||||| |
|
|
T |
3536036 |
gttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaa-gtgtgcctctt |
3535940 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
3535939 |
aggctgcataagttctgctta |
3535919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 3542247 - 3542130
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaa-ttgagagaaaagtctcgaatattattattgaataaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||| ||| |||| |||| || ||||||||||| ||||||||||||||| ||||||||| |||| ||||| |
|
|
T |
3542247 |
gttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaa-gtgtgcctctt |
3542151 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
3542150 |
aggctgcataagttctgctta |
3542130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 30052206 - 30052086
Alignment:
Q |
45 |
agttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaa-ttgagagaaaagtctcgaatattattattgaataaaaa-gtgtctctc |
141 |
Q |
|
|
||||||||||||||||||||||||| | |||||| ||| |||| |||| || ||||||||||| ||||||||||||||| |||||||||| |||| |||| |
|
|
T |
30052206 |
agttgcaagcgacaaacctatcaaaattagggtt-ccggaatccaccaaaaattgagagaaaa-tctcgaatattattaatgaataaaaaagtgtgtctc |
30052109 |
T |
|
Q |
142 |
ttaggctgcataagttatgctta |
164 |
Q |
|
|
||| |||||||||||| |||||| |
|
|
T |
30052108 |
ttaagctgcataagttttgctta |
30052086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 13394436 - 13394532
Alignment:
Q |
255 |
aacaaaatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggc |
352 |
Q |
|
|
||||||||| |||||||||||||| ||| |||||| || |||||||||| | |||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
T |
13394436 |
aacaaaataaaaagttctagaaaa-tgctgaaatatcaataggcggtttcggaccttcagatgacctcgaatgactaaactaacccctacgtcatggc |
13394532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 13645868 - 13645955
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaa |
104 |
Q |
|
|
|||||| | ||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||| |||||| || |||||||||||| |
|
|
T |
13645868 |
agcgcttagcctaaaagataaacagacagattgcaagcaacaaacctattaaataagggtttccggaatctaacagaattgagagaaa |
13645955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 19474681 - 19474828
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
||||||||| |||||||||||||| | | |||||||| ||||||||||| |||||||||||| ||||||| || | |||| ||||||| | |||| || |
|
|
T |
19474681 |
agcgctaaagctaaaagataaacatataggttgcaagagacaaacctattaaataagggttttcgaaatccactagaatt-tgagaaaaatatcgataat |
19474779 |
T |
|
Q |
117 |
tattattgaataaaaagtgtctctcttaggctgcataagttatgcttaaat |
167 |
Q |
|
|
| ||||||||| |||||| || ||||||| ||||||||||| || |||||| |
|
|
T |
19474780 |
ttttattgaatgaaaagt-tc-ctcttagactgcataagttctgtttaaat |
19474828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 30049919 - 30049799
Alignment:
Q |
45 |
agttgcaagcgacaaacctatc-aaataagggtttccgaaatctacc-acaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctc |
141 |
Q |
|
|
|||||||||||||||||||||| |||| |||| ||||| |||| ||| | ||||||||||||| ||||||||||||||| ||||| ||||||||| |||| |
|
|
T |
30049919 |
agttgcaagcgacaaacctatcaaaattaggg-ttccggaatccaccaaaaattgagagaaaa-tctcgaatattattaatgaataaaaaagtgtgtctc |
30049822 |
T |
|
Q |
142 |
ttaggctgcataagttatgctta |
164 |
Q |
|
|
||| |||| ||||||| |||||| |
|
|
T |
30049821 |
ttaagctgaataagttttgctta |
30049799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 26571180 - 26571045
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||| ||||||||||| | ||| ||||||||||||||| |||| ||||| |||||| || |||| | | ||||||||||||| ||||||||| |
|
|
T |
26571180 |
agcgctaaacttaaaagataaatagacaggttgcaagcgacaaatctattaaataggggttttcggaatccgctagaattgagagaaaa-tctcgaataa |
26571082 |
T |
|
Q |
117 |
tattattgaat-aaaaagtgtctctcttaggctgcataa |
154 |
Q |
|
|
| ||||||||| || ||||| |||||||||||||||| |
|
|
T |
26571081 |
ttttattgaatgaataagtg--gctcttaggctgcataa |
26571045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 8568651 - 8568701
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaa |
69 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||| |||||||| ||||| |
|
|
T |
8568651 |
cgctaaacctaaaagataaacagacaagttgcaagctacaaacctgtcaaa |
8568701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 19232283 - 19232216
Alignment:
Q |
88 |
accacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttaggctgcataagtt |
157 |
Q |
|
|
|||| |||||||| |||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||| |
|
|
T |
19232283 |
accaaaattgagataaaagtctcgaatattgttattgaat--aaagtgtgtctcgtaggctgcataagtt |
19232216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 27142537 - 27142618
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
|||||||||||| ||||||| | ||||||||||||||||||||| |||| ||||||| || | |||| |||| |||||||| |
|
|
T |
27142537 |
cgctaaacctaagagataaatagacaagttgcaagcgacaaaccagtcaattaagggtatctggaatccaccataattgaga |
27142618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 19237103 - 19237035
Alignment:
Q |
10 |
gtaagctagcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggttt |
78 |
Q |
|
|
|||||| | |||||||||||||||||||||||| | ||||||||||| ||| ||| |||||||||||| |
|
|
T |
19237103 |
gtaagcaaacgctaaacctaaaagataaacaaataggttgcaagcgataaatatattaaataagggttt |
19237035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 2339336 - 2339404
Alignment:
Q |
285 |
aaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
||||||||||| ||| |||| | | || ||||||||||||||||||||||||| |||||| || ||||| |
|
|
T |
2339336 |
aaatattaaaatgcgatttcggacgttcagacgacctcgaatgactaaaataagccctacatcttggca |
2339404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 3565568 - 3565476
Alignment:
Q |
258 |
aaaatagaaagttctagaaaaatgcataaatattaaaaggcggttt-caggcctttagacgacctcgaatgactaaaataacccctacgtcatg |
350 |
Q |
|
|
|||||| |||||||||||| | ||| || |||||||| ||||||| | |||||| |||||||||||||||| |||| |||| ||||| ||||| |
|
|
T |
3565568 |
aaaatataaagttctagaata-tgctgaagtattaaaacgcggttttcgggccttcagacgacctcgaatgattaaattaactcctacatcatg |
3565476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 69; Significance: 7e-31; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 23573585 - 23573474
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||| |
|
|
T |
23573585 |
gttgcaagcgacaaacctatcaaaataagggtttccgaaatccacctaaattgagagaaaagtctcgaatattattaatgaat-aaaagtgtgcctctta |
23573487 |
T |
|
Q |
145 |
ggctgcataagtt |
157 |
Q |
|
|
|||| |||||||| |
|
|
T |
23573486 |
ggctacataagtt |
23573474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 22921937 - 22922049
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | ||||||||| |||| |||| |||||| |
|
|
T |
22921937 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaatcaaaaggtgtgtctctt |
22922035 |
T |
|
Q |
144 |
aggctgcataagtt |
157 |
Q |
|
|
|||||||||||||| |
|
|
T |
22922036 |
aggctgcataagtt |
22922049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 22926735 - 22926852
Alignment:
Q |
46 |
gttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
||||||||||||||||||||| ||||||||||||| | |||| |||| ||||||||||||| ||||||||||| ||||||||| ||| ||| ||||||| |
|
|
T |
22926735 |
gttgcaagcgacaaacctatcaaaataagggtttctggaatccaccagaattgagagaaaa-tctcgaatatttttattgaat-taaattgtgtctctta |
22926832 |
T |
|
Q |
145 |
ggctgcataagttatgctta |
164 |
Q |
|
|
||||||||||||| |||||| |
|
|
T |
22926833 |
ggctgcataagttctgctta |
22926852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 18180741 - 18180865
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaata |
115 |
Q |
|
|
||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||| ||||||||| |
|
|
T |
18180741 |
agcgctaaacctaaaggataaactgacatgttgcaagcgacaaacctatcaaaataagggtttccagaatccaccagaattgagagaaaa-tctcgaata |
18180839 |
T |
|
Q |
116 |
ttattattgaat-aaaaagtgtctct |
140 |
Q |
|
|
| ||||||||| |||||||| |||| |
|
|
T |
18180840 |
attttattgaatcaaaaagtgcctct |
18180865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 42891751 - 42891870
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| |||| |||| | ||||||||| ||||||||| ||||| |
|
|
T |
42891751 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcaaataattttattgaatcaaaaagtgtgcctctt |
42891849 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
||||| |||||||| |||||| |
|
|
T |
42891850 |
aggctacataagttctgctta |
42891870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 22512133 - 22512219
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaa |
132 |
Q |
|
|
|||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| | |||||||||||||| |
|
|
T |
22512133 |
gttgcaagtgacaaacctatcaaaataagggtttccgaaatccaccagaattgagagaaaa-tctcgaataattttattgaataaaaa |
22512219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 23570586 - 23570500
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaa |
131 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||||||| |
|
|
T |
23570586 |
gttgcaagcgacaaacctatcaaaataagggtttccagaatgcaccagaattgagagaaaagtctcgaatattatttatgaataaaa |
23570500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 26150487 - 26150419
Alignment:
Q |
285 |
aaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggca |
353 |
Q |
|
|
||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||| |||||||| |
|
|
T |
26150487 |
aaatattaaaagggggtttccggccttcagacgacctcgaatgactaaaataacccatacatcatggca |
26150419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 2262769 - 2262692
Alignment:
Q |
23 |
aaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||| | | |||||||||||| || ||||||| | |||||||| |
|
|
T |
2262769 |
aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctactaaaattgaga |
2262692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 38082155 - 38082295
Alignment:
Q |
27 |
ctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaa |
126 |
Q |
|
|
|||||||||||||| | | |||||||||||||||| ||||||||||||||||| | |||||| || |||||||| ||| |||||| ||| |||||||| |
|
|
T |
38082155 |
ctaaaagataaacagagaggttgcaagcgacaaacatatcaaataagggtttcaggaatctatcagaattgaga-aaagttctcgataatttttattgaa |
38082253 |
T |
|
Q |
127 |
taaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
| |||| || |||||||||| | |||||||| ||||||| |
|
|
T |
38082254 |
tgaaaaaagtgcctcttaggctacgaaagttatgtttaaata |
38082295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 22520886 - 22520968
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaata |
128 |
Q |
|
|
|||||||| ||||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | |||||||||| |
|
|
T |
22520886 |
gttgcaagtgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgaata |
22520968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 6845338 - 6845221
Alignment:
Q |
46 |
gttgcaagcgacaaacctatc-aaataagggtttccgaaatctacc-acaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctct |
142 |
Q |
|
|
||||||||||||||||||||| |||||||||||| || |||| ||| | ||||||||||||| ||||||||||||||| ||||| |||||||| ||||| |
|
|
T |
6845338 |
gttgcaagcgacaaacctatcaaaataagggttt-cggaatccaccaaaaattgagagaaaa-tctcgaatattattaatgaatcaaaaagtg--tctct |
6845243 |
T |
|
Q |
143 |
taggctgcataagttatgctta |
164 |
Q |
|
|
|||| | |||||||| |||||| |
|
|
T |
6845242 |
taggatacataagttctgctta |
6845221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 26150669 - 26150570
Alignment:
Q |
68 |
aataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaa |
166 |
Q |
|
|
||||||| ||||| |||| |||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||| || ||||| |
|
|
T |
26150669 |
aataaggatttccagaatccaccagaattgagagaaaagtctcgaatatttttattgaatgaaaaagtg--cctcttaagctgcataagttttgtttaaa |
26150572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 4360858 - 4360979
Alignment:
Q |
12 |
aagctagcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgag-agaaaagtctc |
110 |
Q |
|
|
|||| |||| ||||| ||||||||||| | ||| |||||||||||||||||||| |||||| |||||| |||| | | ||||||| | ||||||||| |
|
|
T |
4360858 |
aagcaagcgttaaacttaaaagataaatacacaggttgcaagcgacaaacctattaaataaaggtttctagaatccatcgaaattgagaaaaaaagtctc |
4360957 |
T |
|
Q |
111 |
gaatattattattgaataaaaa |
132 |
Q |
|
|
||||||| ||||||||| |||| |
|
|
T |
4360958 |
gaatatttttattgaatgaaaa |
4360979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 12310892 - 12310831
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggttt |
78 |
Q |
|
|
|||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||||||| |
|
|
T |
12310892 |
agcgctaaacctaaaagataaacagacaagttgtgagcgacaaacctataaaaaaagggttt |
12310831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 15081599 - 15081538
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttcc |
80 |
Q |
|
|
|||||||| ||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| |
|
|
T |
15081599 |
cgctaaacataagagataaacacacaagttgcaagcgacaaacctgtcaaataaaggtttcc |
15081538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 9295364 - 9295281
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgaga |
100 |
Q |
|
|
||||||||| |||| ||||||||| ||||||||||||||||||| || ||||||| | ||||| | |||| |||| |||||||| |
|
|
T |
9295364 |
agcgctaaatctaagagataaacagacaagttgcaagcgacaaatctgtcaaatatgagtttctggaatccaccagaattgaga |
9295281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 37189868 - 37189783
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaa |
132 |
Q |
|
|
|||||||||||||||||||||||| |||||||| |||||||| |||| || | ||||||| ||||||||||||||| |||||||||| |
|
|
T |
37189868 |
gttgcaagcgacaaacctatcaaaataagggtt-ccgaaatccaccagaaatt-gagaaaaatctcgaatattattaatgaataaaaa |
37189783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 42890392 - 42890281
Alignment:
Q |
48 |
tgcaagcgacaaacctatc-aaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctcttag |
145 |
Q |
|
|
||||||||||||||||||| ||||||||||||||| |||| |||| |||||||| ||||||||| | ||||||||| ||||||||| ||||||| |
|
|
T |
42890392 |
tgcaagcgacaaacctatcaaaataagggtttccggaatccacca------agagaaaa-tctcgaataattttattgaatcaaaaagtgtgcctcttag |
42890300 |
T |
|
Q |
146 |
gctgcataagttatgctta |
164 |
Q |
|
|
||| |||||||| |||||| |
|
|
T |
42890299 |
gctacataagttttgctta |
42890281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 10456259 - 10456329
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctacca |
91 |
Q |
|
|
||||| |||||||||||| | | |||||||||||||||||||| ||||| |||||||||| ||||| |||| |
|
|
T |
10456259 |
ctaaatctaaaagataaatagataagttgcaagcgacaaacctgtcaaaaaagggtttccaaaatccacca |
10456329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 18468633 - 18468598
Alignment:
Q |
93 |
aattgagagaaaagtctcgaatattattattgaata |
128 |
Q |
|
|
||||||||||||||||||||||||||||| |||||| |
|
|
T |
18468633 |
aattgagagaaaagtctcgaatattattaatgaata |
18468598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 42071581 - 42071688
Alignment:
Q |
260 |
aatagaaagttctagaaaaatgcataaatattaaaaggcggtttcaggcctttagacgacctcgaatgactaaaataacccctacgtcatggcacaacga |
359 |
Q |
|
|
|||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| | ||| |
|
|
T |
42071581 |
aatagaaagttctagaaat-tgctaaaatattaaaaggcggtttcgggccttcagacgacctcgaatgactaaaataacccctacatcatggcaaagcga |
42071679 |
T |
|
Q |
360 |
tgtgttttg |
368 |
Q |
|
|
|| |||||| |
|
|
T |
42071680 |
tgagttttg |
42071688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 13444076 - 13444193
Alignment:
Q |
47 |
ttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctcttag |
145 |
Q |
|
|
||||||||||||||| ||||||| |||||||||||| |||| |||| |||||||||||||||||| |||||||||| |||||||||| ||| ||||||| |
|
|
T |
13444076 |
ttgcaagcgacaaacatatcaaaataagggtttccgtaatccaccagaattgagagaaaagtctctaatattattactgaataaaaa-tgtgcctcttag |
13444174 |
T |
|
Q |
146 |
gctgcataagttatgctta |
164 |
Q |
|
|
||| |||||||| |||||| |
|
|
T |
13444175 |
gctacataagttctgctta |
13444193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 12033620 - 12033724
Alignment:
Q |
28 |
taaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat |
127 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||| ||||||| | |||| | | ||||||||||||||||||||||||| ||||| ||| |
|
|
T |
12033620 |
taaaagataaacaaacaagttgcaagcgacaaacttatcaaatgagggtttacataatccattagaattgagagaaaagtctcgaatatttttattaaat |
12033719 |
T |
|
Q |
128 |
aaaaa |
132 |
Q |
|
|
||||| |
|
|
T |
12033720 |
aaaaa |
12033724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 40804679 - 40804576
Alignment:
Q |
28 |
taaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat |
127 |
Q |
|
|
|||||||||| |||| | ||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||| |
|
|
T |
40804679 |
taaaagataagcaaaaagattgcaagcgacaaacctatcaaatacgggtttccaaaatccaccagaattgagagaaaagtctcgaata-tattattgaat |
40804581 |
T |
|
Q |
128 |
aaaaa |
132 |
Q |
|
|
|||| |
|
|
T |
40804580 |
gaaaa |
40804576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 50857531 - 50857650
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctctt |
143 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||||||| | |||||| || ||||||||| ||||| |
|
|
T |
50857531 |
gttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaa-tctcgaataattttattgtatcaaaaagtgtgcctctt |
50857629 |
T |
|
Q |
144 |
aggctgcataagttatgctta |
164 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
50857630 |
aggctgcataagttctgctta |
50857650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 42071380 - 42071489
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatat |
116 |
Q |
|
|
|||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||| ||||| | |||| | || |||||||||| || ||||||||| |
|
|
T |
42071380 |
agcgctaaacctaaaagataaacagacatgttacaagtgacaaacctatcaaataagcgtttctggaatccatcataattgagagagaa-tctcgaataa |
42071478 |
T |
|
Q |
117 |
tattattgaat |
127 |
Q |
|
|
| ||||||||| |
|
|
T |
42071479 |
ttttattgaat |
42071489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 13441686 - 13441797
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaaa-taagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaataaaaagtgtctctctta |
144 |
Q |
|
|
||||||||||| |||||||| ||| ||||| |||||| |||| | || |||||||||||||||||| |||||||||| ||||| |||||||| |||||| |
|
|
T |
13441686 |
gttgcaagcgaaaaacctattaaaataaggatttccggaatccatcagaattgagagaaaagtctctaatattattaatgaat-aaaagtgtgcctctta |
13441784 |
T |
|
Q |
145 |
ggctgcataagtt |
157 |
Q |
|
|
|||| ||||||| |
|
|
T |
13441785 |
ggctatataagtt |
13441797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 45085774 - 45085687
Alignment:
Q |
20 |
gctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagt |
107 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||| | |||||| |||| ||||||| |||| ||||||||||||||| |
|
|
T |
45085774 |
gctaaacctaaaagataaacagacaagttgcaagcgacaaatattgacaataagagttttcgaaatccaccagaattgagagaaaagt |
45085687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 12486314 - 12486392
Alignment:
Q |
47 |
ttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattattattgaa |
126 |
Q |
|
|
|||||||| |||||||||| |||||||||||| || |||| |||| ||||||||||||| ||||||||| | |||||||| |
|
|
T |
12486314 |
ttgcaagcaacaaacctattaaataagggttttcggaatccaccaaaattgagagaaaa-tctcgaataattttattgaa |
12486392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 8931222 - 8931127
Alignment:
Q |
46 |
gttgcaagcgacaaacctatcaa-ataagggtttccgaaatctacca-caattgagagaaaagtctcgaatattattattgaataaaaagtgtctctc |
141 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||| |||| |||| ||||||||||||| ||||||||||||||| ||| ||||||||| |||| |
|
|
T |
8931222 |
gttgcaagcgacaaacctatcaatataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgataaaaaagtgtgtctc |
8931127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 42646701 - 42646624
Alignment:
Q |
17 |
agcgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattga |
98 |
Q |
|
|
|||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||| |||| |||| |||||| |
|
|
T |
42646701 |
agcgctaaacataaaagataaacaagc----tgcaaacgacaaacctatcaaataagggtttccagaatccaccaaaattga |
42646624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 16261641 - 16261529
Alignment:
Q |
19 |
cgctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatatta |
118 |
Q |
|
|
||||||| |||||||||||| ||||| ||| || ||| |||| ||||||||||| |||| |||||| | | |||||| | |||||||||| ||| || |
|
|
T |
16261641 |
cgctaaatctaaaagataaataaacaggttataatcgataaacgtatcaaataagagtttttgaaatccatcgaaattgataaaaaagtctcg-ataata |
16261543 |
T |
|
Q |
119 |
ttattgaataaaaa |
132 |
Q |
|
|
|||||||||||||| |
|
|
T |
16261542 |
ttattgaataaaaa |
16261529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 49043977 - 49043907
Alignment:
Q |
99 |
gagaaaagtctcgaatattattattgaat-aaaaagtgtctctcttaggctgcataagttatgcttaaata |
168 |
Q |
|
|
|||||||||||||| ||| ||||||||| ||||| || |||||||| |||||||||||||| ||||||| |
|
|
T |
49043977 |
gagaaaagtctcgataatttttattgaatgaaaaaaagtgtctcttagactgcataagttatgtttaaata |
49043907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 50004128 - 50004182
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggt |
76 |
Q |
|
|
|||| |||||||||||| | ||| ||||||| | ||||||||||||||||||||| |
|
|
T |
50004128 |
taaatctaaaagataaatagacaggttgcaaacaacaaacctatcaaataagggt |
50004182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 11923915 - 11923859
Alignment:
Q |
22 |
taaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggttt |
78 |
Q |
|
|
||||||||||||||||||| |||| ||| |||| |||||||| ||||| || ||||| |
|
|
T |
11923915 |
taaacctaaaagataaacagacaatttgtaagctacaaacctgtcaaaaaaaggttt |
11923859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0251 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0251
Description:
Target: scaffold0251; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 8218 - 8337
Alignment:
Q |
21 |
ctaaacctaaaagataaacaaacaagttgcaagcgacaaacctatcaaataagggtttccgaaatctaccacaattgagagaaaagtctcgaatattatt |
120 |
Q |
|
|
||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||| | || |||||||| ||| ||||||| ||| | |
|
|
T |
8218 |
ctaaacctagaagataaacagacaagttgcaagcgacaaacctgtcaaataagggtttctggaatccatcagaattgagaaaaagatctcgaaaatt-tg |
8316 |
T |
|
Q |
121 |
attgaat-aaaaagtgtctct |
140 |
Q |
|
|
||||||| ||||||||||||| |
|
|
T |
8317 |
attgaatgaaaaagtgtctct |
8337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 46792 - 46910
Alignment:
Q |
47 |
ttgcaagcgacaaacctatcaaa--taagggtttccgaaatctacc-acaattgagagaaaagtctcgaatattattattgaat-aaaaagtgtctctct |
142 |
Q |
|
|
||||||||||||||||||||||| ||||| ||||| |||| ||| | ||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| |
|
|
T |
46792 |
ttgcaagcgacaaacctatcaaaattaagg--ttccggaatccaccaaaaattgagagaaaa-tctcgaatattattaatgaataaaaaagtgtgtctct |
46888 |
T |
|
Q |
143 |
taggctgcataagttatgctta |
164 |
Q |
|
|
|| |||| ||||||| |||||| |
|
|
T |
46889 |
taagctggataagttttgctta |
46910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 45349 - 45461
Alignment:
Q |
46 |
gttgcaagcgacaaacctatc-aaataagggtttccgaaatctacca-caattgagagaaaagtctcgaatattattattgaataaaaa-gtgtctctct |
142 |
Q |
|
|
||||||||||||||||||||| ||||||||| |||| |||| |||| ||||||||||||| ||||||||||||||| |||||||||| || | |||| |
|
|
T |
45349 |
gttgcaagcgacaaacctatcaaaataaggg-ttccagaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaaatgtttgcctct |
45446 |
T |
|
Q |
143 |
taggctgcataagtt |
157 |
Q |
|
|
||||||||||||||| |
|
|
T |
45447 |
taggctgcataagtt |
45461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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