View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1723_high_15 (Length: 330)
Name: NF1723_high_15
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1723_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 7 - 315
Target Start/End: Original strand, 4030744 - 4031052
Alignment:
| Q |
7 |
gaagcaaagggaaatagtatgaatacaattatagtggggtccaggtcaatttaaaagatattgtgaagcttgttgagacacattgcttcatattaaagaa |
106 |
Q |
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| T |
4030744 |
gaagcaaagggaaatagtatgaatacaattatagtggggtccaggtcaatttaaaagatattgtgaagcttgttgagacacattgcttcatattaaagaa |
4030843 |
T |
|
| Q |
107 |
agtatagtctataataagatgaaataaaacatgaaacagaaagcatcatttttcagtaagaaactcggatttttgtctgaactgaaaatccaagagtact |
206 |
Q |
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| T |
4030844 |
agtatagtctataataagatgaaataaaacatgaaacagaaagcatcatttttcagtaagaaactcggatttttgtctgaactgaaaatccaagagtact |
4030943 |
T |
|
| Q |
207 |
caagaatctttgcaaggaagaaaacaaagattaaaaactcaaactgttgtgactttattaatgcattcattttgcatctaaaaccattttctataattag |
306 |
Q |
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| T |
4030944 |
caagaatctttgcaaggaagaaaacaaagattaaaaactcaaactgttgtgactttattaatgcattcattttgcatctaaaaccattttctataattag |
4031043 |
T |
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| Q |
307 |
aacaaaagt |
315 |
Q |
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| T |
4031044 |
aacaaaagt |
4031052 |
T |
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