View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1723_high_21 (Length: 300)
Name: NF1723_high_21
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1723_high_21 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 6 - 300
Target Start/End: Complemental strand, 430810 - 430519
Alignment:
| Q |
6 |
agcagcagagaccaatacggtgaccggttctttctcaactttgagaagatcactcatgtatctaatgatcttccaaaacaaaaaagtacaaactaaaaca |
105 |
Q |
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| T |
430810 |
agcaccagtgaccaatacggtgaccggttctttctcaactttgagaagatcactcatgtatctaatgatcttccaaaacaaaaaagtacaaactaaaaca |
430711 |
T |
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| Q |
106 |
agaacaattttttgaaggactgttttgtccataatatccaaaccaaacatttccatgttgatcactctttgttaggattctaaggaaacaatctacttca |
205 |
Q |
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| T |
430710 |
agaacaattttttgaaggactgttttgtccataatatccaaaccaaacatttccatgt---tcactctttgttaggattctaaggaaacaatctacttca |
430614 |
T |
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| Q |
206 |
ccatctttttatttaacaagtttgaaaatcaatttaaaattaaagaatcaattcacattactcttgagcaaggcaatcatcatataccagaacca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
430613 |
ccatctttttatttaacaagtttgaaaatcaatttaaaattaaagaatcaatgcacattactcttgagcaaggcaatcatcatataccagaacca |
430519 |
T |
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