View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1723_high_33 (Length: 237)
Name: NF1723_high_33
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1723_high_33 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 30025336 - 30025115
Alignment:
| Q |
16 |
acaagtgtccacaccaaatctggcccgggctacagccaactgcaggaaagcctatcatagcccaaggaggtttcaaccttccatccaacaatgcctacac |
115 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
30025336 |
acaagtgtccacaccaaatctggcccgggctacagccaactgcaggaaagcctatcatagcccaaggaggtttcaaccttccatctaacaatgcctacac |
30025237 |
T |
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| Q |
116 |
aatccaacttccaccgctttggtcaggtcgcatatgggcccgcgacaactgctccttcgacgctacaggccacggtcactgcaccactggagactgcggt |
215 |
Q |
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| T |
30025236 |
actccaacttccaccgctttggtcaggtcgcatatgggcccgcgacaactgctccttcgacgctacaggccacggtcactgcaccactggagactgcggt |
30025137 |
T |
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| Q |
216 |
ggtatactctcatgtaacggcc |
237 |
Q |
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|||||||||||||||||||||| |
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| T |
30025136 |
ggtatactctcatgtaacggcc |
30025115 |
T |
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