View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1723_high_34 (Length: 235)

Name: NF1723_high_34
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1723_high_34
NF1723_high_34
[»] chr6 (22 HSPs)
chr6 (62-231)||(17182433-17182602)
chr6 (1-66)||(12188319-12188384)
chr6 (64-118)||(3673854-3673908)
chr6 (70-113)||(7358869-7358912)
chr6 (2-45)||(20213057-20213100)
chr6 (2-45)||(22107080-22107123)
chr6 (64-118)||(7358942-7358995)
chr6 (4-49)||(6776626-6776671)
chr6 (66-111)||(33122939-33122984)
chr6 (4-61)||(33549104-33549161)
chr6 (1-49)||(28363949-28363997)
chr6 (4-63)||(24641209-24641268)
chr6 (4-62)||(21418469-21418527)
chr6 (7-61)||(30127400-30127454)
chr6 (1-59)||(32613156-32613214)
chr6 (4-41)||(31623010-31623047)
chr6 (1-61)||(3779339-3779399)
chr6 (1-41)||(10338190-10338230)
chr6 (9-61)||(12234531-12234583)
chr6 (1-41)||(15951318-15951358)
chr6 (1-49)||(24507552-24507600)
chr6 (2-58)||(34293833-34293889)
[»] chr1 (57 HSPs)
chr1 (1-61)||(2799862-2799922)
chr1 (64-118)||(29070699-29070753)
chr1 (1-49)||(8177198-8177246)
chr1 (64-120)||(41563079-41563135)
chr1 (2-61)||(9165212-9165271)
chr1 (64-115)||(49586329-49586380)
chr1 (1-59)||(33700789-33700847)
chr1 (64-118)||(41563001-41563055)
chr1 (1-62)||(31794280-31794341)
chr1 (1-61)||(36371470-36371530)
chr1 (5-49)||(52336794-52336838)
chr1 (63-117)||(14442416-14442470)
chr1 (64-118)||(29070621-29070675)
chr1 (1-43)||(44046164-44046206)
chr1 (70-115)||(11322448-11322493)
chr1 (70-115)||(11480469-11480514)
chr1 (1-58)||(15786336-15786393)
chr1 (24-61)||(16530273-16530310)
chr1 (1-45)||(6122810-6122854)
chr1 (1-61)||(19528343-19528403)
chr1 (1-61)||(41508831-41508891)
chr1 (64-116)||(47507649-47507701)
chr1 (2-49)||(6650607-6650654)
chr1 (64-115)||(47507571-47507622)
chr1 (2-49)||(51703791-51703838)
chr1 (3-61)||(4566548-4566606)
chr1 (64-106)||(19175604-19175646)
chr1 (64-118)||(34184438-34184492)
chr1 (64-118)||(52826214-52826268)
chr1 (4-49)||(17410243-17410288)
chr1 (1-58)||(24730387-24730444)
chr1 (64-121)||(34184516-34184573)
chr1 (4-61)||(40257399-40257456)
chr1 (64-97)||(52923348-52923381)
chr1 (1-61)||(8904414-8904474)
chr1 (66-118)||(27732270-27732322)
chr1 (67-115)||(33930822-33930870)
chr1 (2-61)||(30420310-30420369)
chr1 (64-118)||(49586250-49586305)
chr1 (2-49)||(52116798-52116845)
chr1 (8-58)||(26232409-26232459)
chr1 (64-98)||(27732210-27732244)
chr1 (4-61)||(50901581-50901639)
chr1 (1-42)||(10526842-10526883)
chr1 (64-93)||(14214611-14214640)
chr1 (4-49)||(17745275-17745320)
chr1 (4-49)||(21547499-21547544)
chr1 (4-61)||(25297772-25297829)
chr1 (64-97)||(34062025-34062058)
chr1 (70-115)||(49317047-49317092)
chr1 (64-93)||(52923405-52923434)
chr1 (1-41)||(9643825-9643865)
chr1 (64-96)||(10256807-10256839)
chr1 (1-61)||(16169994-16170054)
chr1 (5-41)||(31383818-31383854)
chr1 (1-61)||(51814494-51814554)
chr1 (64-116)||(52826139-52826191)
[»] chr4 (47 HSPs)
chr4 (1-61)||(4249177-4249237)
chr4 (64-121)||(41554077-41554134)
chr4 (1-61)||(37109367-37109427)
chr4 (64-127)||(35820520-35820583)
chr4 (1-62)||(8030220-8030281)
chr4 (1-46)||(38869783-38869828)
chr4 (70-118)||(3435238-3435286)
chr4 (1-61)||(31826609-31826669)
chr4 (1-61)||(51250538-51250598)
chr4 (12-61)||(27965537-27965586)
chr4 (64-113)||(49249894-49249943)
chr4 (64-116)||(3435156-3435208)
chr4 (71-115)||(35820604-35820648)
chr4 (1-61)||(46545711-46545771)
chr4 (7-61)||(37443702-37443756)
chr4 (64-106)||(46462462-46462504)
chr4 (8-61)||(9241048-9241101)
chr4 (4-61)||(19238596-19238653)
chr4 (1-61)||(37274475-37274536)
chr4 (2-58)||(7292815-7292871)
chr4 (1-61)||(7949470-7949530)
chr4 (64-96)||(15659961-15659993)
chr4 (1-61)||(19680804-19680864)
chr4 (5-49)||(29312272-29312316)
chr4 (1-61)||(31759674-31759734)
chr4 (64-116)||(33118280-33118332)
chr4 (1-61)||(37720230-37720290)
chr4 (62-118)||(42183165-42183221)
chr4 (2-61)||(1730506-1730565)
chr4 (1-43)||(23377974-23378016)
chr4 (4-61)||(2606436-2606493)
chr4 (64-93)||(6462741-6462770)
chr4 (65-98)||(38785795-38785828)
chr4 (4-33)||(39509098-39509127)
chr4 (4-61)||(47044717-47044774)
chr4 (64-97)||(48042673-48042706)
chr4 (2-61)||(2185049-2185109)
chr4 (4-61)||(2622414-2622475)
chr4 (1-33)||(5450121-5450153)
chr4 (4-44)||(13015444-13015484)
chr4 (5-49)||(13265128-13265172)
chr4 (66-98)||(20814553-20814585)
chr4 (5-61)||(28635696-28635752)
chr4 (4-44)||(30938238-30938278)
chr4 (65-97)||(33379481-33379513)
chr4 (1-33)||(46329192-46329224)
chr4 (1-49)||(49576910-49576958)
[»] chr3 (55 HSPs)
chr3 (1-49)||(7975430-7975478)
chr3 (1-49)||(30311318-30311366)
chr3 (2-64)||(4222138-4222200)
chr3 (64-118)||(48287991-48288045)
chr3 (1-61)||(46518628-46518688)
chr3 (66-118)||(53739527-53739579)
chr3 (64-118)||(39009839-39009893)
chr3 (64-118)||(53739447-53739501)
chr3 (65-118)||(30675088-30675141)
chr3 (4-61)||(31788989-31789046)
chr3 (70-118)||(14593863-14593911)
chr3 (1-61)||(15048077-15048137)
chr3 (2-58)||(28928896-28928952)
chr3 (1-49)||(32651454-32651502)
chr3 (4-61)||(31520624-31520681)
chr3 (1-45)||(8075143-8075187)
chr3 (1-61)||(27093377-27093437)
chr3 (70-118)||(35504877-35504925)
chr3 (2-49)||(14339622-14339669)
chr3 (59-118)||(35504808-35504866)
chr3 (3-61)||(16354910-16354968)
chr3 (64-118)||(45502721-45502775)
chr3 (64-118)||(45502793-45502847)
chr3 (4-49)||(2667874-2667919)
chr3 (4-61)||(36720381-36720438)
chr3 (73-118)||(39009903-39009948)
chr3 (5-61)||(10499129-10499185)
chr3 (1-61)||(14186648-14186707)
chr3 (1-61)||(26505377-26505437)
chr3 (4-40)||(51903897-51903933)
chr3 (11-62)||(203089-203140)
chr3 (3-62)||(27923061-27923120)
chr3 (4-61)||(10445158-10445216)
chr3 (64-118)||(36458712-36458765)
chr3 (64-118)||(43493796-43493850)
chr3 (64-118)||(46890409-46890463)
chr3 (63-96)||(1086590-1086623)
chr3 (64-93)||(4190710-4190739)
chr3 (4-41)||(4844530-4844567)
chr3 (4-41)||(4870226-4870263)
chr3 (4-61)||(26988996-26989052)
chr3 (1-62)||(37788481-37788542)
chr3 (1-58)||(39253701-39253757)
chr3 (64-97)||(44435256-44435289)
chr3 (4-33)||(44743874-44743903)
chr3 (1-58)||(53412948-53413005)
chr3 (5-61)||(5499427-5499483)
chr3 (1-61)||(11642225-11642285)
chr3 (73-117)||(14593927-14593971)
chr3 (1-41)||(17554791-17554831)
chr3 (64-120)||(19227157-19227213)
chr3 (1-45)||(19341817-19341861)
chr3 (1-61)||(28703420-28703480)
chr3 (1-49)||(35415280-35415328)
chr3 (4-44)||(47454636-47454676)
[»] chr8 (41 HSPs)
chr8 (64-119)||(40372329-40372384)
chr8 (1-59)||(2203494-2203552)
chr8 (5-62)||(6569791-6569848)
chr8 (4-61)||(16852340-16852397)
chr8 (1-61)||(19703503-19703563)
chr8 (1-59)||(3624582-3624640)
chr8 (3-61)||(30483902-30483960)
chr8 (66-116)||(40372253-40372303)
chr8 (1-62)||(18540297-18540358)
chr8 (1-45)||(11819792-11819836)
chr8 (1-61)||(12988428-12988488)
chr8 (1-49)||(35690080-35690128)
chr8 (1-61)||(44780130-44780190)
chr8 (6-61)||(20994479-20994534)
chr8 (64-115)||(43295970-43296021)
chr8 (4-62)||(968361-968419)
chr8 (4-61)||(5264544-5264601)
chr8 (7-59)||(7286209-7286261)
chr8 (1-61)||(23361665-23361725)
chr8 (1-61)||(26688865-26688925)
chr8 (1-41)||(27750750-27750790)
chr8 (1-61)||(28783060-28783120)
chr8 (4-60)||(29858068-29858124)
chr8 (70-121)||(34540667-34540717)
chr8 (71-118)||(41789345-41789392)
chr8 (1-43)||(6536538-6536580)
chr8 (64-118)||(34540747-34540801)
chr8 (4-41)||(7140729-7140766)
chr8 (64-93)||(15037779-15037808)
chr8 (4-61)||(23874401-23874458)
chr8 (4-61)||(35641920-35641977)
chr8 (64-97)||(36308073-36308106)
chr8 (64-97)||(40802285-40802318)
chr8 (3-59)||(8794363-8794419)
chr8 (1-61)||(11518893-11518953)
chr8 (64-92)||(13841929-13841957)
chr8 (1-61)||(18897166-18897226)
chr8 (64-96)||(24418962-24418994)
chr8 (64-96)||(24820324-24820356)
chr8 (5-61)||(29431011-29431067)
chr8 (1-49)||(29915936-29915984)
[»] chr2 (37 HSPs)
chr2 (1-62)||(42327411-42327472)
chr2 (1-61)||(16381670-16381730)
chr2 (1-60)||(16918594-16918653)
chr2 (64-118)||(25312466-25312520)
chr2 (4-61)||(14500277-14500334)
chr2 (1-61)||(29503271-29503331)
chr2 (1-61)||(42602554-42602614)
chr2 (2-62)||(42922413-42922473)
chr2 (71-118)||(23962277-23962324)
chr2 (63-118)||(25312543-25312598)
chr2 (143-231)||(15434980-15435068)
chr2 (1-61)||(34041604-34041664)
chr2 (1-61)||(37480075-37480135)
chr2 (63-118)||(23962354-23962409)
chr2 (4-61)||(1729816-1729873)
chr2 (64-124)||(3197956-3198016)
chr2 (1-61)||(4438995-4439055)
chr2 (1-61)||(11251087-11251147)
chr2 (1-49)||(12086145-12086193)
chr2 (1-45)||(21195692-21195736)
chr2 (1-61)||(23052539-23052599)
chr2 (1-43)||(30410565-30410607)
chr2 (1-62)||(2750642-2750703)
chr2 (4-61)||(7799054-7799111)
chr2 (4-61)||(28846691-28846748)
chr2 (4-61)||(39714992-39715049)
chr2 (64-93)||(41824342-41824371)
chr2 (66-115)||(43341136-43341185)
chr2 (5-49)||(3001391-3001435)
chr2 (1-61)||(5147695-5147755)
chr2 (1-61)||(11062360-11062420)
chr2 (5-49)||(12994396-12994440)
chr2 (1-61)||(19322768-19322828)
chr2 (5-61)||(40416410-40416466)
chr2 (67-115)||(43341214-43341262)
chr2 (64-96)||(43543000-43543032)
chr2 (64-96)||(44274623-44274655)
[»] chr7 (53 HSPs)
chr7 (1-61)||(18363696-18363756)
chr7 (1-61)||(26459426-26459486)
chr7 (2-61)||(25021352-25021411)
chr7 (1-61)||(42836017-42836077)
chr7 (1-44)||(9608645-9608688)
chr7 (1-44)||(9836217-9836260)
chr7 (1-59)||(7744128-7744186)
chr7 (66-116)||(46773921-46773971)
chr7 (1-61)||(17041028-17041088)
chr7 (1-61)||(23552118-23552178)
chr7 (1-41)||(29785317-29785357)
chr7 (1-61)||(30442488-30442548)
chr7 (1-61)||(39631844-39631904)
chr7 (1-61)||(43215184-43215244)
chr7 (5-61)||(48771938-48771994)
chr7 (2-44)||(48984146-48984188)
chr7 (2-59)||(21854550-21854607)
chr7 (64-121)||(33628778-33628835)
chr7 (4-49)||(45709727-45709772)
chr7 (5-58)||(45976943-45976996)
chr7 (1-61)||(7801180-7801240)
chr7 (64-120)||(8269942-8269997)
chr7 (5-61)||(11720980-11721036)
chr7 (1-61)||(22760863-22760923)
chr7 (1-49)||(41519280-41519328)
chr7 (64-96)||(42117542-42117574)
chr7 (64-124)||(46774002-46774062)
chr7 (64-111)||(9487104-9487151)
chr7 (7-62)||(39499741-39499796)
chr7 (2-49)||(43590919-43590966)
chr7 (7-49)||(25956314-25956356)
chr7 (4-62)||(27776171-27776229)
chr7 (1-62)||(5273606-5273667)
chr7 (5-58)||(15905693-15905746)
chr7 (1-62)||(19553453-19553513)
chr7 (4-61)||(20335850-20335907)
chr7 (4-61)||(25590611-25590668)
chr7 (1-62)||(37094748-37094809)
chr7 (1-58)||(37162366-37162423)
chr7 (1-61)||(5579250-5579310)
chr7 (5-33)||(5934149-5934177)
chr7 (64-92)||(8169127-8169155)
chr7 (64-96)||(11602849-11602881)
chr7 (1-61)||(15137553-15137613)
chr7 (5-49)||(21877820-21877864)
chr7 (5-61)||(23301622-23301678)
chr7 (5-61)||(24513797-24513853)
chr7 (1-61)||(31835192-31835252)
chr7 (9-45)||(33181234-33181270)
chr7 (1-61)||(33869461-33869521)
chr7 (64-96)||(34840640-34840672)
chr7 (1-49)||(35119395-35119443)
chr7 (64-96)||(42117486-42117518)
[»] chr5 (42 HSPs)
chr5 (1-61)||(87439-87499)
chr5 (4-61)||(29075781-29075838)
chr5 (5-61)||(21549157-21549213)
chr5 (1-61)||(30883214-30883274)
chr5 (64-115)||(35099599-35099650)
chr5 (64-118)||(6279414-6279468)
chr5 (66-116)||(19216292-19216342)
chr5 (7-61)||(26598524-26598578)
chr5 (1-62)||(16457809-16457870)
chr5 (1-61)||(25627057-25627117)
chr5 (1-61)||(34984806-34984866)
chr5 (64-115)||(884960-885011)
chr5 (66-117)||(19216370-19216421)
chr5 (64-115)||(22012598-22012649)
chr5 (64-118)||(6271927-6271981)
chr5 (64-117)||(24089047-24089100)
chr5 (66-111)||(24089126-24089171)
chr5 (1-33)||(84852-84884)
chr5 (1-61)||(7918485-7918545)
chr5 (1-61)||(14285161-14285221)
chr5 (62-118)||(16052645-16052701)
chr5 (1-49)||(16436630-16436677)
chr5 (5-49)||(22020882-22020926)
chr5 (64-116)||(31927042-31927094)
chr5 (1-49)||(43442208-43442256)
chr5 (68-115)||(884885-884932)
chr5 (5-40)||(17761375-17761410)
chr5 (2-41)||(29692403-29692442)
chr5 (1-48)||(37258382-37258429)
chr5 (5-61)||(43230794-43230852)
chr5 (64-118)||(1023732-1023786)
chr5 (64-106)||(13654525-13654567)
chr5 (63-121)||(31927117-31927175)
chr5 (64-93)||(5110618-5110647)
chr5 (66-119)||(10495295-10495348)
chr5 (4-41)||(14495824-14495861)
chr5 (64-97)||(27990439-27990472)
chr5 (1-49)||(892490-892538)
chr5 (1-61)||(17028280-17028340)
chr5 (5-61)||(30109328-30109384)
chr5 (64-96)||(36759442-36759474)
chr5 (62-98)||(42247576-42247612)
[»] scaffold0012 (2 HSPs)
scaffold0012 (70-121)||(42528-42579)
scaffold0012 (73-118)||(42467-42512)
[»] scaffold0014 (1 HSPs)
scaffold0014 (71-118)||(133226-133273)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-58)||(94987-95044)
[»] scaffold0299 (1 HSPs)
scaffold0299 (4-48)||(11541-11585)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-57)||(13062-13118)
[»] scaffold0070 (1 HSPs)
scaffold0070 (3-66)||(42538-42601)
[»] scaffold1266 (2 HSPs)
scaffold1266 (64-118)||(212-266)
scaffold1266 (64-124)||(128-188)
[»] scaffold0263 (1 HSPs)
scaffold0263 (64-118)||(19875-19929)
[»] scaffold0300 (1 HSPs)
scaffold0300 (8-45)||(4356-4393)
[»] scaffold0258 (1 HSPs)
scaffold0258 (4-61)||(15342-15399)
[»] scaffold0118 (1 HSPs)
scaffold0118 (4-61)||(41652-41709)
[»] scaffold1367 (1 HSPs)
scaffold1367 (4-48)||(859-903)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-49)||(19978-20026)
[»] scaffold0128 (1 HSPs)
scaffold0128 (64-116)||(44606-44658)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-61)||(35405-35465)
[»] scaffold0122 (1 HSPs)
scaffold0122 (2-49)||(6936-6983)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-49)||(1765-1813)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-41)||(2486-2526)
[»] scaffold0172 (2 HSPs)
scaffold0172 (1-49)||(15793-15841)
scaffold0172 (1-61)||(32785-32845)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-49)||(12201-12249)
[»] scaffold0021 (1 HSPs)
scaffold0021 (4-40)||(157006-157042)


Alignment Details
Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 17182602 - 17182433
Alignment:
Q  62 cgtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaagaaaatatgnnnnnnnnacaattttatcatgattgattttg 161  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||         |||| |||||||||||||||||||    
T  17182602 cgtacatcatttattgaatgaacctaaaaagtgaaaagttacttacatttgagaccgaagaaaatatatttcttttacaagtttatcatgattgattttg 17182503  T
Q  162 aaagcatagtcattacggatattttggtgaaaataaatggaataggaagtgaagaaaatagcttgaccca 231  Q
     |||||||||  |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  17182502 gaagcatagtagttacagatattttggtgaaaagaaatggaacaggaagtgaagaaaatagcttgaccca 17182433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12188319 - 12188384
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttcgtac 66  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||| ||||    
T  12188319 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtttgtac 12188384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 3673854 - 3673908
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||| |||||||||||||| |  ||||||||||||||||    
T  3673854 tacatcatttattgaatgaatctaaaaagtgaaaagtcgcttacatttgagaccg 3673908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 7358912 - 7358869
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttga 113  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  7358912 atttattgaatgaaccaaaaaagtgaaaagttacttacatttga 7358869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 20213100 - 20213057
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  20213100 ttgaggaggagcacactcccaggtcccaagcgtataccactagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 22107123 - 22107080
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  22107123 ttgaggaggagcacactcccaggtcccaagcgtataccactagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 7358942 - 7358995
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||    
T  7358942 tacatcaattattgaatgaac-taaaaagtgaaaagttgcttacatttgagaccg 7358995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 6776626 - 6776671
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||    
T  6776626 gaggaggagcacacccccagatcccaagccaataccaccaggccaa 6776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 33122939 - 33122984
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacattt 111  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||    
T  33122939 catcatttattaaatgaatctaaaaagtgaaaaatttcttacattt 33122984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 33549161 - 33549104
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||||||||| ||||||| || |||| | |||||||||    
T  33549161 gaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28363997 - 28363949
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||| |||||||||| || ||||||||| |||||    
T  28363997 cttgaggaggagcacactcgcagatcccaaaccaataccactatgccaa 28363949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 24641209 - 24641268
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttcg 63  Q
    |||||||||||||||||||||||||||| | ||||||| | ||||| | || ||||||||    
T  24641209 gaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggttcg 24641268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 21418527 - 21418469
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||||||  ||||||||| ||||||| ||||||| | || |||||||    
T  21418527 gaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggttc 21418469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 30127454 - 30127400
Alignment:
Q  7 gaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||| |||||||| ||||||| || |||| | |||||||||    
T  30127454 gaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32613156 - 32613214
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    |||||| ||||||||||||||||| |||||| | ||||||| ||||||| | |||||||    
T  32613156 cttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 31623010 - 31623047
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  31623010 gaggaggagcacactcccaggtcccaagccaataccac 31623047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3779399 - 3779339
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||| |||||||||||||||  || |||||| ||||||||||| ||| | |||||||||    
T  3779399 cttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgggtt 3779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10338190 - 10338230
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||||| || ||||||||| |||||||    
T  10338190 cttgaggaggagcacactcctaggtcccaagccaataccac 10338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 12234531 - 12234583
Alignment:
Q  9 ggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||| ||||||| | ||||||| ||||||| | |||||||||    
T  12234531 ggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15951318 - 15951358
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||||||| ||| ||||| ||||||||    
T  15951318 cttgaggaggagcacactcccaaatctcaagcttataccac 15951358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24507552 - 24507600
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| ||||| || ||||||||| | |||||||||||||    
T  24507552 cttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaa 24507600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34293833 - 34293889
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||||| || |||| || ||||||||||| ||| | ||||||    
T  34293833 ttgaggaggagcacactcccaaattccaaaccaataccactaggtcaacccaagtgg 34293889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2799922 - 2799862
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2799922 cttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 29070699 - 29070753
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  29070699 tacatcatttattgaatgaacctaaaatgtgaaaaattgcttacatttgagaccg 29070753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8177198 - 8177246
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8177198 cttgaggaggagcacactcccagatcccaagccaataccactaggccaa 8177246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 41563079 - 41563135
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaa 120  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  41563079 tacatcatttattgagtgaacctaaaaagtgaaaagtttcttacatttgagaccgaa 41563135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 9165212 - 9165271
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  9165212 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 49586329 - 49586380
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  49586329 tacatcatttattgaatgaacctaaaaagtgaaaagttacttatatttgaga 49586380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33700789 - 33700847
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  33700789 cttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 41563055 - 41563001
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  41563055 tacatcatttattgaatgaacctaaaaaatgaaaagtttcttacatttgagaccg 41563001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31794280 - 31794341
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||| | ||||||||||    
T  31794280 cttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggttc 31794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36371530 - 36371470
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||| | |||||||||    
T  36371530 cttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 52336794 - 52336838
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  52336794 aggaggagcacactcccagatcccaagccaataccactaggccaa 52336838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 14442470 - 14442416
Alignment:
Q  63 gtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagacc 117  Q
    ||||||||||||||||||||| |||||| ||||||| || |||||||||||||||    
T  14442470 gtacatcatttattgaatgaatctaaaaggtgaaaagtttcttacatttgagacc 14442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 29070675 - 29070621
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||| |||||||| |||| || ||||||||||||||||    
T  29070675 tacatcatttattgaatgaacataaaaagtaaaaagttgcttacatttgagaccg 29070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44046164 - 44046206
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccacta 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  44046164 cttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 11322448 - 11322493
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  11322448 atttattgaatgaacctaaaaagtaaaaaatttcttacatttgaga 11322493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 11480469 - 11480514
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  11480469 atttattgaatgaacctaaaaagtaaaaaatttcttacatttgaga 11480514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15786336 - 15786393
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| |||| | ||||||    
T  15786336 cttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 16530273 - 16530310
Alignment:
Q  24 atcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16530273 atcccaagcctataccactaggccaagcgaagtgggtt 16530310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6122854 - 6122810
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  6122854 cttgaggaggagcacactcccaagtcccaagcctataccactagg 6122810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19528343 - 19528403
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||| | |||||||||    
T  19528343 cttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41508891 - 41508831
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||||||||||| ||  |||||| ||||||| | |||||||||    
T  41508891 cttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 47507649 - 47507701
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  47507649 tacataatttattgaatgaatctaaaaagtgaaaaattgcttacatttaagac 47507701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 6650654 - 6650607
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  6650654 ttgaggaggagcatactccccgatcccaagccaataccactaggccaa 6650607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 47507622 - 47507571
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    ||||| ||||||| |||||| ||||||||||||||||| |||||||||||||    
T  47507622 tacataatttattaaatgaatctaaaaagtgaaaaattgcttacatttgaga 47507571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 51703838 - 51703791
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  51703838 ttgaggaggagcacactcccagattccaagccaataccactagaccaa 51703791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 4566606 - 4566548
Alignment:
Q  3 tgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||| | ||||||| ||| ||||||||||| | |||||||||    
T  4566606 tgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 19175646 - 19175604
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattactta 106  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  19175646 tacatcatttattgaatgaacctaaaaagtgaaattttactta 19175604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 34184492 - 34184438
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||| ||||||||||| ||||||||||||||||| ||  |||||||||||||||    
T  34184492 tacattatttattgaataaacctaaaaagtgaaaagttttttacatttgagaccg 34184438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 52826214 - 52826268
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||| ||||| | |||| || ||||||||||||||||    
T  52826214 tacatcatttattgaatgaaccaaaaaaataaaaagtttcttacatttgagaccg 52826268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 17410288 - 17410243
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||| |||||||||||||||||| || |||||||||||||||    
T  17410288 gaggaggaccacactcccagatcccaaaccaataccactaggccaa 17410243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24730444 - 24730387
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||| |||||||||||||||||||| |||| | ||||||||||||||| | ||||||    
T  24730444 cttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 34184516 - 34184573
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaag 121  Q
    ||||| ||||||||||||||| |||||||||||||  | |||||| ||||||||||||    
T  34184516 tacataatttattgaatgaacttaaaaagtgaaaagattcttacaattgagaccgaag 34184573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 40257456 - 40257399
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| || |||||| ||||||| ||||||| | |||||||||    
T  40257456 gaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 52923381 - 52923348
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    ||||||||||||||||||||||||||||||||||    
T  52923381 tacatcatttattgaatgaacctaaaaagtgaaa 52923348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8904474 - 8904414
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| || |||||||| | |||| |||||||||| | |||||||||    
T  8904474 cttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 27732270 - 27732322
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||| ||||||||||||||||||||| || |||| | |||||||||    
T  27732270 catcatttattcaatgaacctaaaaagtgaaaagttgcttataattgagaccg 27732322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 33930822 - 33930870
Alignment:
Q  67 atcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||||||| ||| |||||| ||||||||| |||||||||||||    
T  33930822 atcatttattgaataaacttaaaaaatgaaaaattgcttacatttgaga 33930870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 30420369 - 30420310
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| | |||||||||| | |||||| |||||| | |||||||||    
T  30420369 ttgaggaggagcacactcctatatcccaagccaaaaccacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 49586305 - 49586250
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaa-ttacttacatttgagaccg 118  Q
    ||||| ||||||| |||||||||||||| ||||||| || ||||||||||||||||    
T  49586305 tacataatttattaaatgaacctaaaaaatgaaaaagttgcttacatttgagaccg 49586250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 52116798 - 52116845
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||||  ||||||||| ||||||| |||||||    
T  52116798 ttgaggaggagcacactcccaagtcccaagccaataccaccaggccaa 52116845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 26232409 - 26232459
Alignment:
Q  8 aggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||| |||||| |||||||||| |||| | ||||||    
T  26232409 aggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 27732244 - 27732210
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaa 98  Q
    ||||||||||||| |||||||||||||||||||||    
T  27732244 tacatcatttattcaatgaacctaaaaagtgaaaa 27732210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 50901639 - 50901581
Alignment:
Q  4 gaggaggagcacactcccagatcccaagccta-taccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||| |||| ||||||||| | |||||||||||||| | |||||||||    
T  50901639 gaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10526883 - 10526842
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccact 42  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  10526883 cttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 14214611 - 14214640
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  14214611 tacatcatttattgaatgaacctaaaaagt 14214640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 17745275 - 17745320
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| | ||| ||||||||| |||||||||||||||    
T  17745275 gaggaggagcacacgctcaggtcccaagccaataccactaggccaa 17745320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 21547499 - 21547544
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||| ||||||  ||||||||| |||||||||||||||    
T  21547499 gaggaggagcaccctcccatgtcccaagccaataccactaggccaa 21547544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25297829 - 25297772
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||| ||||||| ||| | |||||||||| |||| | |||||||||    
T  25297829 gaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 34062025 - 34062058
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||    
T  34062025 tacatcattaattgaatgaacctaaaaagtgaaa 34062058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 49317047 - 49317092
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||||||| |||||||||  |||||| |||||||||||||    
T  49317047 atttattgaatgaatctaaaaagtacaaaatttcttacatttgaga 49317092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 52923405 - 52923434
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  52923405 tacatcatttattgaatgaacctaaaaagt 52923434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9643825 - 9643865
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||| || ||||||||||||||||||||| |||||||    
T  9643825 cttgaggatgaacacactcccagatcccaagccaataccac 9643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 10256839 - 10256807
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||| ||||||||||||    
T  10256839 tacatcatttattgaatgaatctaaaaagtgaa 10256807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16169994 - 16170054
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| ||||||||||| ||||||| | ||||||| |||| || | |||||||||    
T  16169994 cttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 31383818 - 31383854
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccac 41  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  31383818 aggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51814554 - 51814494
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| |||||| |||| | ||||||  ||||||| | |||||||||    
T  51814554 cttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 52826191 - 52826139
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    ||||||||||||||||| ||   |||||||||||| || ||||||||||||||    
T  52826191 tacatcatttattgaataaattaaaaaagtgaaaattttcttacatttgagac 52826139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4249237 - 4249177
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  4249237 cttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 41554077 - 41554134
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaag 121  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41554077 tacatgatttattgaatgaacctaaaaagtgaaaaattgcttacatttgagaccgaag 41554134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37109367 - 37109427
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  37109367 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 35820583 - 35820520
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaagaaaata 127  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||||||| || |||||    
T  35820583 tacatcctttattgaatgaacctaaaaagtgaaaagttgcttacatttgagaccggaggaaata 35820520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8030220 - 8030281
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||| | ||||||||||    
T  8030220 cttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggttc 8030281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38869828 - 38869783
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggc 46  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  38869828 cttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 3435238 - 3435286
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  3435238 atttattgaatgaacctaaaaagtgaaaagttgcttacatttgagaccg 3435286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31826669 - 31826609
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| || |||||||||||||||||||||| ||| | |||||||||    
T  31826669 cttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51250538 - 51250598
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  51250538 cttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 27965537 - 27965586
Alignment:
Q  12 gcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 49249943 - 49249894
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttga 113  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  49249943 tacatcatttattagatgaacctaaaaagtgaaaaatttcttacatttga 49249894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 3435208 - 3435156
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||    
T  3435208 tacattatttattgaatgaacctcaaaagtgaaaagttgcttacatttgagac 3435156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 35820604 - 35820648
Alignment:
Q  71 tttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  35820604 tttattgaatgaacctaaaaagtgaaaagttgcttacatttgaga 35820648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46545771 - 46545711
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| ||| || |||||| ||||||||||||||| | |||||||||    
T  46545771 cttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37443756 - 37443702
Alignment:
Q  7 gaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||| |||||||||||||||||||| ||||||||||| ||| | |||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 46462462 - 46462504
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattactta 106  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  46462462 tacatcatttattcaatgaacctaaaaagtgaaaaattgctta 46462504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 9241048 - 9241101
Alignment:
Q  8 aggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| |||||||||||||| ||||||| ||||||| | |||||||||    
T  9241048 aggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 19238596 - 19238653
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||  ||||||||| ||||||| ||||||| | |||||||||    
T  19238596 gaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37274475 - 37274536
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagccta-taccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||||||| | ||| |||||||||| | |||||||||    
T  37274475 cttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7292815 - 7292871
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    |||||||||||||||||||||| | ||||||| |||||||||| |||| | ||||||    
T  7292815 ttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7949470 - 7949530
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| || ||||||||| ||||| ||||||||  | |||||||||    
T  7949470 cttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 15659993 - 15659961
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||||||||||||||||    
T  15659993 tacatcatttattgaatgaacctaaaaagtgaa 15659961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19680804 - 19680864
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||| |||||||||||||  ||||||||  ||||||||||||||| | |||||||||    
T  19680804 cttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 29312272 - 29312316
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||    
T  29312272 aggaggagaacactcccacatcccaagccaataccactaggccaa 29312316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31759674 - 31759734
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||  ||| | |||||||||    
T  31759674 cttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 33118280 - 33118332
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    ||||||||| ||||| |||||||||||||| |||| || ||||||||||||||    
T  33118280 tacatcattaattgattgaacctaaaaagtaaaaagttgcttacatttgagac 33118332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37720230 - 37720290
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||| |||||||||||| ||||||||| ||| ||| ||||||| | |||||||||    
T  37720230 cttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 42183221 - 42183165
Alignment:
Q  62 cgtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||| ||||||||||||||| |||||||| |||||||  |||||||||| ||||    
T  42183221 cgtacattatttattgaatgaacttaaaaagtaaaaaattgattacatttgaaaccg 42183165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 1730506 - 1730565
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||| ||||||||||||| ||| ||||||||| ||||||||||| ||| | |||||||||    
T  1730506 ttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23378016 - 23377974
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccacta 43  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||    
T  23378016 cttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 2606493 - 2606436
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| |||| ||||||| || || ||||||||||||||| | |||||||||    
T  2606493 gaggaggagcatactcacagatcctaaaccaataccactaggccaatctaagtgggtt 2606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Complemental strand, 6462770 - 6462741
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  6462770 tacatcatttattgaatgaacctaaaaagt 6462741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 38785828 - 38785795
Alignment:
Q  65 acatcatttattgaatgaacctaaaaagtgaaaa 98  Q
    |||||||||||| |||||||||||||||||||||    
T  38785828 acatcatttattcaatgaacctaaaaagtgaaaa 38785795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 39509127 - 39509098
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcc 33  Q
    ||||||||||||||||||||||||||||||    
T  39509127 gaggaggagcacactcccagatcccaagcc 39509098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 47044774 - 47044717
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| |||| ||||||||||| | ||||||| ||||||| | |||||||||    
T  47044774 gaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 48042673 - 48042706
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||    
T  48042673 tacatcattaattgaatgaacctaaaaagtgaaa 48042706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 2185049 - 2185109
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa-gcgaagtgggtt 61  Q
    ||||| |||||||||||||||| | |||||||  ||||||||||||||  |||||||||||    
T  2185049 ttgagaaggagcacactcccaggttccaagccattaccactaggccaacccgaagtgggtt 2185109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 2622414 - 2622475
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcc----tataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| |||||||||     ||||||||||||||| | |||||||||    
T  2622414 gaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5450153 - 5450121
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcc 33  Q
    ||||||||||||||||||||||||| |||||||    
T  5450153 cttgaggaggagcacactcccagattccaagcc 5450121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 13015484 - 13015444
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactag 44  Q
    |||||||||||||||||||  ||||||||| ||||||||||    
T  13015484 gaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 13265128 - 13265172
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||| |||||| ||||||||| ||||| |||||||||    
T  13265128 aggaggagcacattcccaggtcccaagccaatacctctaggccaa 13265172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 20814585 - 20814553
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaa 98  Q
    |||||||||||||||||||||||||||| ||||    
T  20814585 catcatttattgaatgaacctaaaaagtcaaaa 20814553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 28635752 - 28635696
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||||||| |  |||||| ||| ||| | |||||||||    
T  28635752 aggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 30938238 - 30938278
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactag 44  Q
    ||||||||||||||||| ||||||||| || ||||||||||    
T  30938238 gaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 33379481 - 33379513
Alignment:
Q  65 acatcatttattgaatgaacctaaaaagtgaaa 97  Q
    |||||||| ||||||||||||||||||||||||    
T  33379481 acatcattaattgaatgaacctaaaaagtgaaa 33379513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46329224 - 46329192
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  46329224 cttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49576910 - 49576958
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||||  ||| ||||| ||||||| |||||||    
T  49576910 cttgaggaggagcacactcccaagtccaaagccaataccaccaggccaa 49576958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7975478 - 7975430
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7975478 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 7975430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30311366 - 30311318
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30311366 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 30311318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 4222200 - 4222138
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttcgt 64  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||    
T  4222200 ttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggttcgt 4222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 48288045 - 48287991
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  48288045 tacatcatttattgaatgaacctaaaaagtaaaaaatttcttacatttgagaccg 48287991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46518688 - 46518628
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||    
T  46518688 cttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 53739527 - 53739579
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  53739527 catcatttattgaatgaacctaaaaagtgaaaagttgcttacatttgagaccg 53739579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 39009893 - 39009839
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  39009893 tacatcatttattgaatgaacctcaaaagtgaaaagttgcttacatttgagaccg 39009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 53739501 - 53739447
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  53739501 tacatcatttattgaatgaacctaaaaagtaaaaagttgcttacatttgagaccg 53739447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 30675141 - 30675088
Alignment:
Q  65 acatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  30675141 acatcatttattaaatgaacctaaaaagtgaaaagtttcttacatttgagaccg 30675088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 31788989 - 31789046
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||    
T  31788989 gaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 14593911 - 14593863
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14593911 atttattgaatgcacctaaaaagtgaaaaattgcttacatttgagaccg 14593863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15048077 - 15048137
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||| ||||||||||||||||||||||| || ||||| | |||||||||    
T  15048077 cttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 28928896 - 28928952
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32651454 - 32651502
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32651454 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 32651502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 31520624 - 31520681
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||||||||||| || |||| ||||||| | |||||||||    
T  31520624 gaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8075143 - 8075187
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  8075143 cttgaggaggagcacactcccaagtcccaagcctataccactagg 8075187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27093377 - 27093437
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||  | ||||||| ||||||||||||||| | |||||||||    
T  27093377 cttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 35504877 - 35504925
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  35504877 atttatttaatgaacttaaaaagtgaaaaatttcttacatttgagaccg 35504925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 14339669 - 14339622
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  14339669 ttgaggaggagcacactcccaaatcccaagccaataccaccaggccaa 14339622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 35504866 - 35504808
Alignment:
Q  59 gttcgtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||| ||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||    
T  35504866 gttcatacatcatttatttaatgaatctaaaaagt-aaaaattgcttacatttgagaccg 35504808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 16354910 - 16354968
Alignment:
Q  3 tgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||| ||| | ||||||| ||||||||||||||| | |||||||||    
T  16354910 tgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 45502775 - 45502721
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||||||| | |||| ||  |||||||||||||||    
T  45502775 tacatcatttattgaatgaacctaaaaaataaaaagttgtttacatttgagaccg 45502721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 45502793 - 45502847
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||||||| | |||| ||  |||||||||||||||    
T  45502793 tacatcatttattgaatgaacctaaaaaataaaaagttgtttacatttgagaccg 45502847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 2667919 - 2667874
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||    
T  2667919 gaggaagagcacactcccagatcccaagccaataccaccaggccaa 2667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 36720438 - 36720381
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| |||||||||| ||||||| || |||| | |||||||||    
T  36720438 gaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 39009903 - 39009948
Alignment:
Q  73 tattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||    
T  39009903 tattgaatgaacttaaaaagtgaaaagttgcttacatttgagaccg 39009948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10499129 - 10499185
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||| ||||| |||||||||||||||||| ||||||| ||||||| | |||||||||    
T  10499129 aggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14186707 - 14186648
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| || ||||||| | ||||||||||||||| | |||||||||    
T  14186707 cttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26505377 - 26505437
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||| |||||||||||| ||| ||||||||||||||||||| | |||| | |||||||||    
T  26505377 cttgaagaggagcacacttccatatcccaagcctataccactggaccaatccaagtgggtt 26505437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 51903897 - 51903933
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctatacca 40  Q
    |||||||||||||||||||||||||||||| ||||||    
T  51903897 gaggaggagcacactcccagatcccaagccaatacca 51903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 203140 - 203089
Alignment:
Q  11 agcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||| ||||||||| | ||||||||||||||| | ||||||||||    
T  203140 agcacactccctgatcccaagtcaataccactaggccaacccaagtgggttc 203089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 27923061 - 27923120
Alignment:
Q  3 tgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||| |||  ||||||||| ||||||| ||||||| | ||||||||||    
T  27923061 tgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggttc 27923120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 10445158 - 10445216
Alignment:
Q  4 gaggaggagcacactcccagatcccaagccta-taccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||||||||| | | |||||||||||| | |||||||||    
T  10445158 gaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 36458712 - 36458765
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||| | |||||| | ||||||| ||||||||||||||||    
T  36458712 tacatcatttattgaatgatcttaaaaa-taaaaaattgcttacatttgagaccg 36458765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 43493850 - 43493796
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||| |||||| ||||||| ||||||| | ||||||||| ||||||    
T  43493850 tacatcatttattaaatgaatctaaaaattgaaaaaattcttacatttaagaccg 43493796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 46890409 - 46890463
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||| ||  ||||||||||||| || |||| |||||||||||    
T  46890409 tacatcatttattgaataaatttaaaaagtgaaaagttgcttagatttgagaccg 46890463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 1086590 - 1086623
Alignment:
Q  63 gtacatcatttattgaatgaacctaaaaagtgaa 96  Q
    ||||||||||||||||||||| ||||||||||||    
T  1086590 gtacatcatttattgaatgaatctaaaaagtgaa 1086623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 4190710 - 4190739
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  4190710 tacatcatttattgaatgaacctaaaaagt 4190739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4844530 - 4844567
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||||||||||||| | |||||||    
T  4844530 gaggaggagcacactcccagatcccaagtcaataccac 4844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4870226 - 4870263
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||||||||||||| | |||||||    
T  4870226 gaggaggagcacactcccagatcccaagtcaataccac 4870263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 26989052 - 26988996
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| |||| ||||||| ||||| ||||||||||||||| | |||||||||    
T  26989052 gaggaggagcaaactctcagatcc-aagccaataccactaggccaacccaagtgggtt 26988996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37788481 - 37788542
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||||||| || | ||||| | |||||||| |||||| | ||||||||||    
T  37788481 cttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggttc 37788542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39253757 - 39253701
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||| ||| | ||||||    
T  39253757 cttgaagaggagcacactcccagatcccaagtcta-accactaggtcaacctaagtgg 39253701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 44435256 - 44435289
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||    
T  44435256 tacatcattaattgaatgaacctaaaaagtgaaa 44435289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 44743874 - 44743903
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcc 33  Q
    ||||||||||||||||||||||||||||||    
T  44743874 gaggaggagcacactcccagatcccaagcc 44743903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53413005 - 53412948
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||||||| |  |||||| |||||||||| |||| | ||||||    
T  53413005 cttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 5499427 - 5499483
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||| |||||| |||| | ||||||| ||||||| | |||||||||    
T  5499427 aggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11642225 - 11642285
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| |||| || |||||||||||  ||||||| |||||||| | |||||||||    
T  11642225 cttgaggaggatcacaatctcagatcccaagtttataccagtaggccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 14593927 - 14593971
Alignment:
Q  73 tattgaatgaacctaaaaagtgaaaaattacttacatttgagacc 117  Q
    |||||||||||||||||||||||||| ||  || |||||||||||    
T  14593927 tattgaatgaacctaaaaagtgaaaagttgtttgcatttgagacc 14593971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17554831 - 17554791
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||| |||||||||||||| ||||||||| |||||||    
T  17554831 cttgaggaagagcacactcccaggtcccaagccaataccac 17554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 19227213 - 19227157
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaa 120  Q
    ||||||||||||| | |||| |||||||||||||| || |||| |||| ||||||||    
T  19227213 tacatcatttattaagtgaatctaaaaagtgaaaagttgcttatatttaagaccgaa 19227157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19341861 - 19341817
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||||||||||  || |||| |||||||||||||    
T  19341861 cttgaggaggagcacactcccaagtctcaagtctataccactagg 19341817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28703420 - 28703480
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||| ||||||||||||||||||||||||||  ||| |||| | |||| | |||||||||    
T  28703420 cttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35415328 - 35415280
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||| | |||||||| |||||||||| || |||||||||||||||    
T  35415328 cttgaggatgggcacactctcagatcccaaaccaataccactaggccaa 35415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47454636 - 47454676
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactag 44  Q
    ||||||||||||||||| ||||| |||||| ||||||||||    
T  47454636 gaggaggagcacactccaagatctcaagccaataccactag 47454676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 40372329 - 40372384
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccga 119  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40372329 tacataatttattgaatgaacctaaaaagtgaaaaatttcttacatttgagaccga 40372384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2203552 - 2203494
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||    
T  2203552 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6569791 - 6569848
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggttc 6569848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 16852397 - 16852340
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  16852397 gaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19703503 - 19703563
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||| | |||||||||    
T  19703503 cttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3624640 - 3624582
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||||| | |||||||    
T  3624640 cttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 30483902 - 30483960
Alignment:
Q  3 tgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||| | |||||||||    
T  30483902 tgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 40372303 - 40372253
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    ||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  40372303 catcatttattaaatgaacctaaaaagtgaaaagttgcttacatttgagac 40372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18540358 - 18540297
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||| || |||||||||| ||||||||| ||||||||||||||| | ||||||||||    
T  18540358 cttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggttc 18540297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11819836 - 11819792
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  11819836 cttgaggaggagcacactcccaagtcccaagcctataccactagg 11819792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12988488 - 12988428
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||| |||| | ||||||| ||||||||||||||| | |||||||||    
T  12988488 cttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35690080 - 35690128
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||    
T  35690080 cttgaggaggagcaaacacccagatcccaagccaataccactaggccaa 35690128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44780130 - 44780190
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||||| | |||||||||    
T  44780130 cttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  6 ggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||| ||||||| | ||||||||||||||| | |||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 43295970 - 43296021
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    ||||||||||||||||||||  ||||||||||||| || |||||||||||||    
T  43295970 tacatcatttattgaatgaatttaaaaagtgaaaagttgcttacatttgaga 43296021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 968419 - 968361
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||   ||||||||||    
T  968419 gaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggttc 968361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 5264601 - 5264544
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||| |||||| | ||||||| ||||||||||||||| | |||||||||    
T  5264601 gaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 7286261 - 7286209
Alignment:
Q  7 gaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    |||||||||||||||||||||||| || ||||||||||| ||| | |||||||    
T  7286261 gaggagcacactcccagatcccaaaccaataccactaggtcaacctaagtggg 7286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23361665 - 23361725
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||| |||||||| | ||||||| ||| ||| | |||||||||    
T  23361665 cttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26688925 - 26688865
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| || ||||||||| | ||||| ||||||| | |||||||||    
T  26688925 cttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27750790 - 27750750
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  27750790 cttgaggaggagcacactcccaagtcccaagcctataccac 27750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28783120 - 28783060
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| || |||||| ||||||| | ||||| | |||||||||    
T  28783120 cttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 29858068 - 29858124
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggt 60  Q
    |||||||||||||||||| | ||||||||| ||||||| ||||||| | ||||||||    
T  29858068 gaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 34540717 - 34540667
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaag 121  Q
    ||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||    
T  34540717 atttattgaatgaacataaaa-gtgtaaagttacttacatttgagaccgaag 34540667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 41789392 - 41789345
Alignment:
Q  71 tttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||||    
T  41789392 tttattgaatgaacttaaaaagtaaaaagttgcttacatttgagaccg 41789345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6536580 - 6536538
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccacta 43  Q
    |||||||||||||||||||| || ||||||||| |||||||||    
T  6536580 cttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 34540747 - 34540801
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||| ||||||||| |||||| |||| || ||| ||||||||||||    
T  34540747 tacatcatttattaaatgaacctcaaaagtaaaaagttgcttccatttgagaccg 34540801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 7140766 - 7140729
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  7140766 gaggaggagcacacacccagatcccaagccaataccac 7140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Complemental strand, 15037808 - 15037779
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  15037808 tacatcatttattgaatgaacctaaaaagt 15037779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 23874401 - 23874458
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||| ||| | |||||| ||||||||| ||||||||||||||| | |||||||||    
T  23874401 gaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 35641920 - 35641977
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| ||| |||||| ||||||| || |||| | |||||||||    
T  35641920 gaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 36308073 - 36308106
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    |||||||||||||||||||| |||||||||||||    
T  36308073 tacatcatttattgaatgaatctaaaaagtgaaa 36308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 40802285 - 40802318
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||    
T  40802285 tacatcattaattgaatgaacctaaaaagtgaaa 40802318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 8794363 - 8794419
Alignment:
Q  3 tgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    |||||||||||||||| |||| | ||||||| ||||||||| ||||| | |||||||    
T  8794363 tgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11518893 - 11518953
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||| | |||||||||  | |||||||||||||||||||| || | |||||||||    
T  11518893 cttgaggaggggtacactcccaagttccaagcctataccactaggctaacccaagtgggtt 11518953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 13841929 - 13841957
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaag 92  Q
    |||||||||||||||||||||||||||||    
T  13841929 tacatcatttattgaatgaacctaaaaag 13841957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18897226 - 18897166
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||  || |||||| || | ||||||||||||| | |||||||||    
T  18897226 cttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 24418962 - 24418994
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||| ||||||||||||    
T  24418962 tacatcatttattgaatgaatctaaaaagtgaa 24418994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 24820356 - 24820324
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    ||||||||||||||||||||||||| |||||||    
T  24820356 tacatcatttattgaatgaacctaagaagtgaa 24820324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 29431067 - 29431011
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||  ||||||||| ||||| | ||||||| | |||||||||    
T  29431067 aggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29915936 - 29915984
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||  |||||||||||||||  |||||| ||||||||||    
T  29915936 cttgaggaggagcgtactcccagatcccaaatctatacaactaggccaa 29915984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42327411 - 42327472
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||    
T  42327411 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttc 42327472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16381670 - 16381730
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||    
T  16381670 cttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16918594 - 16918653
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggt 60  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||| | ||||||||    
T  16918594 cttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 25312520 - 25312466
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  25312520 tacatcatatattgaatgaacataaaaagtgaaaaattgcttacatttgagaccg 25312466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 14500334 - 14500277
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||    
T  14500334 gaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29503331 - 29503271
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||| | |||||||||    
T  29503331 cttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42602614 - 42602554
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  42602614 cttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 42922473 - 42922413
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||| | ||||||||||    
T  42922473 ttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttc 42922413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 23962324 - 23962277
Alignment:
Q  71 tttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  23962324 tttattgaatgaacctaaaaagtgaaaagttgcttacatttgagaccg 23962277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 25312543 - 25312598
Alignment:
Q  63 gtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||    
T  25312543 gtacatcatttattgaatgaacctaaaaagtaaaaagttgcttgcatttgagaccg 25312598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 15435068 - 15434980
Alignment:
Q  143 tttatcatgattgattttgaaagcatagtcattacggatattttggtgaaaataaatggaataggaagtgaagaaaatagcttgaccca 231  Q
    |||||||||| ||||| | | ||||||||| |||| || ||| ||||||||| |||||||  | | |||||||||||||||||||||||    
T  15435068 tttatcatgaatgattcttagagcatagtcgttacagacattatggtgaaaagaaatggaggaaggagtgaagaaaatagcttgaccca 15434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34041604 - 34041664
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| ||||||| ||| | ||||||||||||||| | |||||||||    
T  34041604 cttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37480135 - 37480075
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| ||||||| | |||||||||    
T  37480135 cttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 23962354 - 23962409
Alignment:
Q  63 gtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||||||||||| ||||||||| |||| || |||||| |||||||||    
T  23962354 gtacatcatttattgaatgaatctaaaaagtaaaaagttgcttacaattgagaccg 23962409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 1729873 - 1729816
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||  ||||||||| |||||||||| |||| | |||||||||    
T  1729873 gaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 3198016 - 3197956
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaagaaa 124  Q
    |||||||| |||||||||||  ||||| || |||| |||||||||||||||||||| ||||    
T  3198016 tacatcatgtattgaatgaatttaaaatgtaaaaatttacttacatttgagaccgatgaaa 3197956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4438995 - 4439055
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| |||||||||||   |||||| |||||||| | |||||||||    
T  4438995 cttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11251147 - 11251087
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||| |||  ||||||||| ||||||||| ||||| | |||||||||    
T  11251147 cttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12086145 - 12086193
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||| |||| ||||||||| ||||||| |||||||    
T  12086145 cttgaggaggagcacacttccaggtcccaagccaataccaccaggccaa 12086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21195692 - 21195736
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||||||||||  | |||||||||||||||||||    
T  21195692 cttgaggaggagcacactcccaagttccaagcctataccactagg 21195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23052539 - 23052599
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||| ||||||||||||  ||||||||| ||||||| ||||||| | |||||||||    
T  23052539 cttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30410565 - 30410607
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccacta 43  Q
    |||||||||||||||||||| || ||||||||| |||||||||    
T  30410565 cttgaggaggagcacactcctaggtcccaagccaataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2750642 - 2750703
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||| ||||||||| || ||| |||||| |||||||||| |||||  |||||||||||    
T  2750642 cttgaggaagagcacactaccggattccaagcttataccactacgccaacagaagtgggttc 2750703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 7799054 - 7799111
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||  ||||||||| ||||||| ||| ||| | |||||||||    
T  7799054 gaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 28846748 - 28846691
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||||||| | ||||||||||  ||| | |||||||||    
T  28846748 gaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 39715049 - 39714992
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||||||| | ||||||| | ||||| | |||||||||    
T  39715049 gaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 41824342 - 41824371
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  41824342 tacatcatttattgaatgaacctaaaaagt 41824371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 43341185 - 43341136
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||||||||||| ||||||||| |||| || ||||| |||||||    
T  43341185 catcatttattgaatgaatctaaaaagtaaaaagttgcttacgtttgaga 43341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 3001435 - 3001391
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||| ||||| |||| | |||||||||||||||    
T  3001435 aggaggagcacactcctagatctcaagtcaataccactaggccaa 3001391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5147695 - 5147755
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||| ||||||| ||||||||||| |||| | |||||||||| |||| | |||||||||    
T  5147695 cttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11062420 - 11062360
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||| ||||||||||||  | ||||||| ||| ||||||||||| | |||||||||    
T  11062420 cttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 12994396 - 12994440
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||| ||||||| | |||||||||| ||||    
T  12994396 aggaggagcacactcccaggtcccaagtcaataccactagaccaa 12994440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19322828 - 19322768
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||| ||||||||||||||||| |||||| || ||||||||||  ||| | |||||||||    
T  19322828 cttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggtt 19322768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 40416410 - 40416466
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||| |||||||| | ||||| | ||||||||||||||| | |||||||||    
T  40416410 aggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 43341214 - 43341262
Alignment:
Q  67 atcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||||||| |||||| ||||||||| |||| || |||||||||||||    
T  43341214 atcatttattaaatgaatctaaaaagtaaaaagttgcttacatttgaga 43341262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 43543000 - 43543032
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||||||||||| ||||    
T  43543000 tacatcatttattgaatgaacctaaaaaatgaa 43543032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 44274623 - 44274655
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||| ||||||||||||    
T  44274623 tacatcatttattgaatgaatctaaaaagtgaa 44274655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18363756 - 18363696
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||    
T  18363756 cttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26459426 - 26459486
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  26459426 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25021352 - 25021411
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  25021352 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42836017 - 42836077
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  42836017 cttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9608645 - 9608688
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactag 44  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  9608645 cttgaggaggaggacactcccagatcccaagcctataccactag 9608688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9836217 - 9836260
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactag 44  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  9836217 cttgaggaggaggacactcccagatcccaagcctataccactag 9836260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7744128 - 7744186
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||| | |||||||    
T  7744128 cttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 46773971 - 46773921
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  46773971 catcatttattgaatgaacctaaaaaataaaaaattgcttacatttgagac 46773921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17041028 - 17041088
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||| |||||||||||||| || ||||||| |||| | |||||||||    
T  17041028 cttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23552178 - 23552118
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||||| | ||| ||||||||||| | |||||||||    
T  23552178 cttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29785317 - 29785357
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  29785317 cttgaggaggagcacacttccagatcccaagcctataccac 29785357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30442548 - 30442488
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||| |||||||| ||||||||| |||||||| |||||| | |||||||||    
T  30442548 cttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39631904 - 39631844
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||  |||||||| ||||||||| ||||||||||||||| | |||||||||    
T  39631904 cttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43215244 - 43215184
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||    
T  43215244 cttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 48771994 - 48771938
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||| | |||||||||    
T  48771994 aggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 48984146 - 48984188
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactag 44  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  48984146 ttgaggaggagcacactcccaagtcccaagcctataccactag 48984188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 21854607 - 21854550
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtggg 59  Q
    ||||||||||||||||||||||||||| |||| ||||||  ||||||| | |||||||    
T  21854607 ttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 33628778 - 33628835
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaag 121  Q
    ||||| ||||||| |||||| |||||| ||||||||||| |||||||||||| |||||    
T  33628778 tacataatttattaaatgaatctaaaatgtgaaaaattatttacatttgagatcgaag 33628835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 45709727 - 45709772
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||    
T  45709727 gaggaggagcacactctcagatcccaagctaataccactaggccaa 45709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 45976943 - 45976996
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||| || |||||| ||||||||||||||| | ||||||    
T  45976943 aggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7801240 - 7801180
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||| ||||||||||||||||| ||||||| | ||||||| ||||||| | |||||||||    
T  7801240 cttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 8269942 - 8269997
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaa 120  Q
    ||||| |||||||||||||||  |||||||||||| || ||||||||||||||||||    
T  8269942 tacattatttattgaatgaaca-aaaaagtgaaaagttgcttacatttgagaccgaa 8269997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 11720980 - 11721036
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||| |||||| ||||||||| ||||||| ||||||| |||||| ||||    
T  11720980 aggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaagttggtt 11721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22760923 - 22760863
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||||| | ||||||| || |||| | |||||||||    
T  22760923 cttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41519280 - 41519328
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||| | |||||||| | |||||||||||||||    
T  41519280 cttgaggaggagcacactcctaaatcccaagtcaataccactaggccaa 41519328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 42117542 - 42117574
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||||||||||||||||    
T  42117542 tacatcatttattgaatgaacctaaaaagtgaa 42117574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 46774002 - 46774062
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaagaaa 124  Q
    |||||||||| ||||| ||||||||||| |||||| || || ||||||||||||| |||||    
T  46774002 tacatcatttgttgaaagaacctaaaaaatgaaaagttgctcacatttgagaccggagaaa 46774062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 9487104 - 9487151
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacattt 111  Q
    ||||||||||||||||| ||| ||| |||||||||||| |||||||||    
T  9487104 tacatcatttattgaataaacttaagaagtgaaaaattgcttacattt 9487151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 39499741 - 39499796
Alignment:
Q  7 gaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||| ||||||| ||| ||||||||| ||||||||||||||| | ||||||||||    
T  39499741 gaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggttc 39499796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 43590966 - 43590919
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||||  ||||||||| ||||||| |||||||    
T  43590966 ttgaggaggagcacactcccaagtcccaagccaataccaccaggccaa 43590919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 25956314 - 25956356
Alignment:
Q  7 gaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| || ||||||||| |||||||||||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaa 25956356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 27776229 - 27776171
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||| ||  |||||||| |||||||| ||||||| | ||||||||||    
T  27776229 gaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggttc 27776171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5273606 - 5273667
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||||||  || ||||||||| | ||||| ||||||| | ||||||||||    
T  5273606 cttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggttc 5273667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 15905693 - 15905746
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||| ||||||||| ||||| | ||||||| | ||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19553513 - 19553453
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||| | ||| ||||||    
T  19553513 cttgaggaggagcacactcccaggt-ccaagccaataccaccaggccaacccaagcgggttc 19553453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 20335850 - 20335907
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||  ||||||||| ||||| |||| |||| | |||||||||    
T  20335850 gaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25590668 - 25590611
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| |||||| ||||||  ||| ||| | |||||||||    
T  25590668 gaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37094809 - 37094748
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||| |||||   ||||||||||    
T  37094809 cttgaggaggatcacacttccagatcccaaacctatatcactatgccaattcaagtgggttc 37094748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37162366 - 37162423
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    |||||| || |||||||||||| ||| |||| || |||||||||||||| ||||||||    
T  37162366 cttgagaagaagcacactcccaaatctcaagtctttaccactaggccaaccgaagtgg 37162423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5579250 - 5579310
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| || ||||||||| | ||||| ||| ||| | |||||||||    
T  5579250 cttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 5934177 - 5934149
Alignment:
Q  5 aggaggagcacactcccagatcccaagcc 33  Q
    |||||||||||||||||||||||||||||    
T  5934177 aggaggagcacactcccagatcccaagcc 5934149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 92
Target Start/End: Complemental strand, 8169155 - 8169127
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaag 92  Q
    |||||||||||||||||||||||||||||    
T  8169155 tacatcatttattgaatgaacctaaaaag 8169127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 11602849 - 11602881
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||| ||||||||||||    
T  11602849 tacatcatttattgaatgaatctaaaaagtgaa 11602881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15137613 - 15137553
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| | |||||||| |  |||||| ||||||| | |||||||||    
T  15137613 cttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 21877864 - 21877820
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  21877864 aggaggagcaccctcccaggtcccaagtcaataccactaggccaa 21877820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 23301622 - 23301678
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||  ||||||| | ||||||| ||||||| | |||||||||    
T  23301622 aggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 24513853 - 24513797
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||| || ||||||||| ||| |||||| ||||||||||||||| | |||||||||    
T  24513853 aggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31835252 - 31835192
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||  |||||||| | ||||| ||||||| | |||||||||    
T  31835252 cttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 33181234 - 33181270
Alignment:
Q  9 ggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||  |||||||||||||||||||||    
T  33181234 ggagcacactcccaagtcccaagcctataccactagg 33181270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33869461 - 33869521
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||| ||||||||||| |||| || |||||| |||| |||||||||| | |||||||||    
T  33869461 cttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 34840672 - 34840640
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||||||||| ||||||||||||    
T  34840672 tacatcatttattgaatgaatctaaaaagtgaa 34840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35119443 - 35119395
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||| ||||| || ||||||||||||| | |||||||||||||||    
T  35119443 cttgaggatgagcatacacccagatcccaagtcaataccactaggccaa 35119395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 42117518 - 42117486
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    |||||||||||||| ||||||||||||||||||    
T  42117518 tacatcatttattggatgaacctaaaaagtgaa 42117486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 87439 - 87499
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  87439 cttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 29075838 - 29075781
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||||||||||||| |||||||||||| || | |||||||||    
T  29075838 gaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30883214 - 30883274
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| |||| | |||||||||    
T  30883214 cttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 35099650 - 35099599
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  35099650 tacatcatttattaaatgaatctaaaaagagaaaaattacttacatttgaga 35099599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 6279468 - 6279414
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||    
T  6279468 tacatcatttagtgaatgaacctaaaaattgaaaaattgcttacatttgaaaccg 6279414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 19216342 - 19216292
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    |||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  19216342 catcatttattgaatgaacctaaaaaatgaaaagttgcttacatttgagac 19216292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26598578 - 26598524
Alignment:
Q  7 gaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggtt 26598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16457870 - 16457809
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttc 62  Q
    |||||||||||||||||||| || ||||||||| ||||||| ||||||| | ||||||||||    
T  16457870 cttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggttc 16457809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25627117 - 25627057
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||  | ||||||| ||||||||||||||| | |||||||||    
T  25627117 cttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34984866 - 34984806
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| | ||||||| |||||||||| |||| | |||||||||    
T  34984866 cttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 884960 - 885011
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    ||||||||||||||||||||| |||||| |||||| || |||||||||||||    
T  884960 tacatcatttattgaatgaacttaaaaaatgaaaagtttcttacatttgaga 885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 19216370 - 19216421
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagacc 117  Q
    ||||||||||||||| || |||||||||||||| || |||||||||||||||    
T  19216370 catcatttattgaataaaactaaaaagtgaaaagttgcttacatttgagacc 19216421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 22012649 - 22012598
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    |||||| ||||||||||||| |||||||||||||| || |||||||||||||    
T  22012649 tacatcgtttattgaatgaatctaaaaagtgaaaagtttcttacatttgaga 22012598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 6271981 - 6271927
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||||||| ||| |||||| ||  |||||||||||||||    
T  6271981 tacatcatttattgaatgaacctacaaaatgaaaagttttttacatttgagaccg 6271927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 24089100 - 24089047
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagacc 117  Q
    |||||||||||||||||||||||||||||| |||| ||  ||| ||||||||||    
T  24089100 tacatcatttattgaatgaacctaaaaagtaaaaagttgtttatatttgagacc 24089047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 24089126 - 24089171
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacattt 111  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||    
T  24089126 catcatttattgaatgaacctaaaaaatgaaaaattgcttagattt 24089171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 84884 - 84852
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  84884 cttgaggaggagcacactcccagatcccaagcc 84852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7918485 - 7918545
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||  ||||||||| | ||||||| ||||||||||||||| | |||||||||    
T  7918485 cttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14285221 - 14285161
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||| | ||||||| || ||||| |||||| | |||||||||    
T  14285221 cttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 16052701 - 16052645
Alignment:
Q  62 cgtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||| |||||  ||||||||||||| || |||| |||||||||||    
T  16052701 cgtacatcatttattggatgaatttaaaaagtgaaaagttgcttatatttgagaccg 16052645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16436677 - 16436630
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||    
T  16436677 cttgaggaggagcacactccaag-tcccaagccaataccactaggccaa 16436630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 22020882 - 22020926
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||    
T  22020882 aggaggagcacactcccagatcccaagctaataccactatgccaa 22020926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 31927094 - 31927042
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    |||||||| ||||| |||||| |||||||| ||||||||||||||||| ||||    
T  31927094 tacatcatatattgtatgaacataaaaagtcaaaaattacttacatttaagac 31927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43442256 - 43442208
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||||||||||||||| ||| || ||||||||| |||||    
T  43442256 cttgaggaggagcacactcccagatctcaaaccaataccactatgccaa 43442208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 884932 - 884885
Alignment:
Q  68 tcatttattgaatgaacctaaaaagtgaaaaattacttacatttgaga 115  Q
    ||||||||||| ||||||||||||||||||| || |||| ||||||||    
T  884932 tcatttattgagtgaacctaaaaagtgaaaagtttcttatatttgaga 884885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 17761375 - 17761410
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctatacca 40  Q
    ||||||||||||||||||||||||||||| ||||||    
T  17761375 aggaggagcacactcccagatcccaagccgatacca 17761410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 29692403 - 29692442
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  29692403 ttgaggaggagcacactcccagatcccaatccaataccac 29692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37258382 - 37258429
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggcca 48  Q
    |||||||||||||||||||| |||||||||||  ||||||||| ||||    
T  37258382 cttgaggaggagcacactcctagatcccaagctaataccactaagcca 37258429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 43230794 - 43230852
Alignment:
Q  5 aggaggagcacactcccagatcccaagcc--tataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||| |||| ||||||||  |||||||||||||||| | |||||||||    
T  43230794 aggaggagcacactctcagaacccaagccaatataccactaggccaacccaagtgggtt 43230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 1023732 - 1023786
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||| | |||||||||    
T  1023732 tacatcatttattcaatgaacctaaaaaaagaaaagttacttataattgagaccg 1023786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 13654567 - 13654525
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattactta 106  Q
    |||||||||||||||||||||||||||||| || | |||||||    
T  13654567 tacatcatttattgaatgaacctaaaaagtcaatatttactta 13654525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 31927117 - 31927175
Alignment:
Q  63 gtacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaag 121  Q
    ||||||||||||||||||||| ||||||| | |||| ||  |||||||||||| |||||    
T  31927117 gtacatcatttattgaatgaatctaaaaaataaaaagttgtttacatttgagatcgaag 31927175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 5110618 - 5110647
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagt 93  Q
    ||||||||||||||||||||||||||||||    
T  5110618 tacatcatttattgaatgaacctaaaaagt 5110647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 10495295 - 10495348
Alignment:
Q  66 catcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccga 119  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| |  |||||||||    
T  10495295 catcatttattcaatgaacttaaaaagtgaaaatttacttataaatgagaccga 10495348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 14495824 - 14495861
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccac 41  Q
    |||||||||||||||||||||||||||| | |||||||    
T  14495824 gaggaggagcacactcccagatcccaagtcaataccac 14495861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 27990439 - 27990472
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||    
T  27990439 tacatcattaattgaatgaacctaaaaagtgaaa 27990472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 892490 - 892538
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||| ||||||  || ||||||||| |||||||||||||||    
T  892490 cttgaggaggagtacactctgaggtcccaagccaataccactaggccaa 892538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17028280 - 17028340
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||||||  |||||| || |||| |||||| ||| | |||||||||    
T  17028280 cttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgggtt 17028340  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 30109328 - 30109384
Alignment:
Q  5 aggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||||||||| || |||||| ||||||| | ||||| | |||||||||    
T  30109328 aggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 36759442 - 36759474
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaa 96  Q
    ||||||||||||||||||||| |||||||||||    
T  36759442 tacatcatttattgaatgaacgtaaaaagtgaa 36759474  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 42247612 - 42247576
Alignment:
Q  62 cgtacatcatttattgaatgaacctaaaaagtgaaaa 98  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  42247612 cgtacatcatttattgaatgaacataaaaagtcaaaa 42247576  T

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Target: scaffold0012 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 42528 - 42579
Alignment:
Q  70 atttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaag 121  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  42528 atttattgaatgcacctaaaaagtgaaaaattgcttacatttgagaccgaag 42579  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 42512 - 42467
Alignment:
Q  73 tattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||| ||||||| || ||| ||||||||||||    
T  42512 tattgaatgaacctaaaatgtgaaaagttgcttgcatttgagaccg 42467  T

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Target: scaffold0014 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 133226 - 133273
Alignment:
Q  71 tttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  133226 tttattcaatgaacctaaaaagtgaaaaattgcttacatttgagaccg 133273  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 94987 - 95044
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgg 58  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||| | ||||||    
T  94987 cttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 11585 - 11541
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggcca 48  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  11585 gaggaggagcacactcccagatcccaagccaataccaccaggcca 11541  T

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Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13062 - 13118
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtg 57  Q
    |||||||||||||||||||||||||| |||||| ||||||| | ||||| |||||||    
T  13062 cttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 42538 - 42601
Alignment:
Q  3 tgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggttcgtac 66  Q
    |||||||||||| |||||||||| ||||| | ||||||||||||||| | || |||||||||||    
T  42538 tgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggttcgtac 42601  T

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Target: scaffold1266 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 212 - 266
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    |||||||||||||||||||| |||||||||||||| ||  ||||||||| |||||    
T  212 tacatcatttattgaatgaatctaaaaagtgaaaagttggttacatttgtgaccg 266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 188 - 128
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccgaagaaa 124  Q
    ||||| ||||||| |||||| |||||||||||||||||  |||||||||||| || |||||    
T  188 tacataatttattaaatgaatctaaaaagtgaaaaattggttacatttgagatcggagaaa 128  T

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Target: scaffold0263 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 19875 - 19929
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagaccg 118  Q
    ||||| ||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  19875 tacataatttattaaatgaatctaaaaagtgaaaaattggttacatttgagaccg 19929  T

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Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 4393 - 4356
Alignment:
Q  8 aggagcacactcccagatcccaagcctataccactagg 45  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4393 aggagcacactcccaaatcccaagcctataccactagg 4356  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 15342 - 15399
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||||||||| ||||||||| ||||||| || |||| | |||||||||    
T  15342 gaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 41652 - 41709
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||| |||| |||||| |||||| ||||||||||||||| | |||||||||    
T  41652 gaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

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Target: scaffold1367 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 859 - 903
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctataccactaggcca 48  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  859 gaggaggagcacattcccagatcccaagccaataccaccaggcca 903  T

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Target: scaffold0180 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19978 - 20026
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| |||||||| | ||||||| |||||||||||||||    
T  19978 cttgaggaggagcatactcccaggttccaagccaataccactaggccaa 20026  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 44658 - 44606
Alignment:
Q  64 tacatcatttattgaatgaacctaaaaagtgaaaaattacttacatttgagac 116  Q
    |||| |||||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  44658 tacaccatttattaaataaacctgaaaagtgaaaaaatacttacatttgagac 44606  T

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Target: scaffold0063 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35405 - 35465
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    |||||||||||||| ||||| |||| ||||||| |||||||| ||| || |||||||||||    
T  35405 cttgaggaggagcatactcctagattccaagccaataccactgggcaaaccgaagtgggtt 35465  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 6936 - 6983
Alignment:
Q  2 ttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    ||||||||||||||||||||   ||||||||| |||||||||||||||    
T  6936 ttgaggaggagcacactccccagtcccaagccaataccactaggccaa 6983  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1813 - 1765
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| ||||| || ||||||||| | |||||||||||||    
T  1813 cttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaa 1765  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2486 - 2526
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccac 41  Q
    ||||||||||||||||||||||||||| || || |||||||    
T  2486 cttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15793 - 15841
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| ||||| | |||||||||| ||||||| |||||||    
T  15793 cttgaggaggagcatactccaaaatcccaagccaataccaccaggccaa 15841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32785 - 32845
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaagcgaagtgggtt 61  Q
    ||||||||||||| ||| |||||||||  |||| ||||||| ||||||| | |||||||||    
T  32785 cttgaggaggagcgcacccccagatcctcagccaataccaccaggccaacccaagtgggtt 32845  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12249 - 12201
Alignment:
Q  1 cttgaggaggagcacactcccagatcccaagcctataccactaggccaa 49  Q
    |||||||||||||| ||||| || ||||||||| | |||||||||||||    
T  12249 cttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaa 12201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 157006 - 157042
Alignment:
Q  4 gaggaggagcacactcccagatcccaagcctatacca 40  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  157006 gaggaggagcacactcccagatctcaagccaatacca 157042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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