View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1723_low_17 (Length: 320)
Name: NF1723_low_17
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1723_low_17 |
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[»] scaffold0100 (1 HSPs) |
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[»] scaffold0004 (1 HSPs) |
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[»] scaffold0048 (1 HSPs) |
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[»] scaffold0006 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 89; Significance: 7e-43; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 4383217 - 4383081
Alignment:
Q |
171 |
taagattaaaagcaaattattttttagataaaccatacgtttttcaaatttgtatagggattcaagaaaaatgtaacccttcatgatatttatgttgcat |
270 |
Q |
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|
||||| ||||||||||| |||||||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||| ||||||||| | || |
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|
T |
4383217 |
taagactaaaagcaaataattttttagataaaccatacctttttcaattatgtatagggatctaagaaaaatgtaacccttcataatatttatggagtat |
4383118 |
T |
|
Q |
271 |
atgaataattgaaacgaagaaaataccttgtgtagaa |
307 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||| |
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|
T |
4383117 |
atgaataattgaaatgaagaaaataccttgtgtagaa |
4383081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 39931493 - 39931559
Alignment:
Q |
2 |
tatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||| |
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|
T |
39931493 |
tatgtaaataaataagtttttattttattttataagctctcactaacgaaaattgtatcttcataaa |
39931559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 23284743 - 23284815
Alignment:
Q |
5 |
gtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaa |
77 |
Q |
|
|
|||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | |||||||| |||||||| |
|
|
T |
23284743 |
gtaaataaataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataaaataccttaa |
23284815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3966867 - 3966814
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaac |
54 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
T |
3966867 |
ttatgtaaataaataagtttttattttaatttataagctctcgctaacgaaaac |
3966814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4603280 - 4603349
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||||||||||||||| |||| ||||| ||||||| |||||||||||||||| ||| | |||||||||| |
|
|
T |
4603280 |
ttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaattgtatcttcataaact |
4603349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9201788 - 9201736
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||||||||| |||||||||| |
|
|
T |
9201788 |
ttatgtaaataaataagtttttattttaatttataagctctcgctaacgaaaa |
9201736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19414253 - 19414201
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| |||||||||||||||||||||||| |
|
|
T |
19414253 |
ttatgtaaataaataagcttttattttactttataagctctcactaacgaaaa |
19414201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42617178 - 42617230
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |
|
|
T |
42617178 |
ttatgtaaataaataagtttttattttaatttataagttttcactaacgaaaa |
42617230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 15184674 - 15184615
Alignment:
Q |
11 |
aaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||| ||||| |||||||| ||||||||||||||| ||| | |||||||||| |
|
|
T |
15184674 |
aaataagtttttattttaatttataagttctcactaacgaaaattgtatcttcataaact |
15184615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15179955 - 15179889
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||||||||| |||| ||||| | |||||| ||| ||||||||||| ||| ||||||||| |
|
|
T |
15179955 |
ttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa |
15179889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46175927 - 46175997
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaacta |
71 |
Q |
|
|
||||||||||||||||| ||| ||||| |||||||||||| |||| |||||| ||| | ||||||||||| |
|
|
T |
46175927 |
ttatgtaaataaataagcatttattttaatttataagctcttactagcgaaaattgtatcttcataaacta |
46175997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14987548 - 14987621
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa---ctgttttttcataaacta |
71 |
Q |
|
|
|||| ||||||||||||||||| | ||| || ||||| ||||||||||||||| ||||||||||||||||| |
|
|
T |
14987548 |
ttatataaataaataagtttttatattaattcataagttctcactaacgaaaattgttgttttttcataaacta |
14987621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22303233 - 22303166
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
||||||||||| |||||||||| ||||| ||||||| || ||||||| ||||| ||| | |||||||| |
|
|
T |
22303233 |
ttatgtaaatatataagtttttattttaatttataaactttcactaatgaaaattgtatcttcataaa |
22303166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47202963 - 47202896
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||| ||||||| |||| |||| ||||| |||||||| ||||||||||||||| ||| | |||||||| |
|
|
T |
47202963 |
ttatataaataagtaagcttttattttaatttataagatctcactaacgaaaattgtatcttcataaa |
47202896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19725432 - 19725379
Alignment:
Q |
1 |
ttatgtaaataaataagtttttg-ttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||| |||||||||||| ||||| |||||||||||||||||| ||||| |
|
|
T |
19725432 |
ttatgtaaaaaaataagttttttattttaatttataagctctcactaatgaaaa |
19725379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7673593 - 7673541
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||| ||| ||| ||||| ||||||||| |||||||||||||| |
|
|
T |
7673593 |
ttatgtaaataaacaaggatttattttaatttataagccctcactaacgaaaa |
7673541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 46704286 - 46704334
Alignment:
Q |
54 |
ctgttttttcataaactaccttaaagacctcacgaataataaattaaag |
102 |
Q |
|
|
|||||||||||||||||||||||| | |||| ||||||||||| |||| |
|
|
T |
46704286 |
ctgttttttcataaactaccttaacaagctcatgaataataaataaaag |
46704334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2757034 - 2757111
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
2757034 |
ttatgtaaataaataagtttttattttattttataagctctcactaacgaaaactgttttttcataaactactttaaa |
2757111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32366287 - 32366218
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || | |||||||||| |
|
|
T |
32366287 |
ttatgtaaataaataagcttttgttttattttataagctcttactaacgaaaatcgtatattcataaact |
32366218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5516214 - 5516145
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| ||| |||| ||||||| |
|
|
T |
5516214 |
ttatgcaaataaataagcttttgtgttaatttataagctctcactaacgaaaattgtatttttataaact |
5516145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22422117 - 22422169
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |
|
|
T |
22422117 |
ttatgtaaataaataagtttttattttaatttataagctctcactaacaaaaa |
22422169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30382217 - 30382269
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |
|
|
T |
30382217 |
ttatgtaaataaataagcttttgttttaatttataagctttcactaacgaaaa |
30382269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 446565 - 446498
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| |||| |||| ||||| |||||||||||||||||||||||| ||| | |||||||| |
|
|
T |
446565 |
ttatgtaaataagtaagcttttattttaatttataagctctcactaacgaaaattgtatcttcataaa |
446498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32521994 - 32522063
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||| | ||||| |||||||||||| ||||||||||| ||| | ||||| |||| |
|
|
T |
32521994 |
ttatgtaaataaataagtttatattttaatttataagctcttactaacgaaaattgtatcttcatgaact |
32522063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40301496 - 40301429
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||||||||||| | |||| ||||| ||||||| |||||||||||||||| ||| | ||||||||| |
|
|
T |
40301496 |
ttatgtaaataaata-gcttttattttaatttataaactctcactaacgaaaagtgtatcttcataaac |
40301429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 34913458 - 34913505
Alignment:
Q |
124 |
atttatttgtatacgctgttttgcataagctcaatccgaacggtccct |
171 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||||| ||||| |||| |
|
|
T |
34913458 |
atttatttgcataagctgttttgcataagctcaatccaaacggaccct |
34913505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2401570 - 2401636
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
|||||||||||||||| ||||| ||||| | |||||| ||| |||||| |||| ||| ||||||||| |
|
|
T |
2401570 |
ttatgtaaataaataaatttttattttaatctataagttctgactaacaaaaattgtattttcataa |
2401636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22898305 - 22898371
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||||||||| |||| ||||| | |||||| | | ||||||||||| ||| ||||||||| |
|
|
T |
22898305 |
ttatgtaaataaataagcttttattttaatctataagttttgactaacgaaaattgtattttcataa |
22898371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23956212 - 23956281
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||| |||||||||||||||| | ||| |||||||| ||||| ||||||||| ||| | || ||||||| |
|
|
T |
23956212 |
ttatgcaaataaataagtttttatgttaatttataagttctcattaacgaaaattgtatctttataaact |
23956281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17546562 - 17546510
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||| ||||| | ||| |||||||| | ||||||||||||| |
|
|
T |
17546562 |
ttatgtaaataaataaatttttatgttagtttataagttttcactaacgaaaa |
17546510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21788595 - 21788543
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||| ||||||||||| |||| | ||| || ||||||||||||||||||||| |
|
|
T |
21788595 |
ttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaa |
21788543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Original strand, 22422181 - 22422209
Alignment:
Q |
50 |
aaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
22422181 |
aaaactgttttttcataaactaccttaaa |
22422209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26440231 - 26440195
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataag |
37 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||| |
|
|
T |
26440231 |
ttatgtaaataaataagtttttattttaatttataag |
26440195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 24371379 - 24371447
Alignment:
Q |
10 |
taaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||||||||||| |
|
|
T |
24371379 |
taaataagtttttattttattttataagctctcactaacgaaaattgtatcttcataaactaccttaaa |
24371447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44799540 - 44799470
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaacta |
71 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||||||||||||| | | | | ||||||||||| |
|
|
T |
44799540 |
ttatgtaaataaataagtttttattttaatttataagctctcactaacgaatattctatcttcataaacta |
44799470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22575724 - 22575655
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||||| |||||||||||||| ||||| |||||||||||| ||||||||||| ||| | |||||||||| |
|
|
T |
22575724 |
ttatgtagataaataagtttttattttaatttataagctcttactaacgaaaattgtatcttcataaact |
22575655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 991637 - 991570
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
||||||||||||||||| |||| ||||| ||||||| |||||||||||||||| ||| | |||||||| |
|
|
T |
991637 |
ttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaagtgtatcttcataaa |
991570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23137111 - 23137179
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
|||||||||||| |||| |||| ||||| |||||||||||||||||| ||||| ||| | ||||||||| |
|
|
T |
23137111 |
ttatgtaaataagtaagcttttattttaatttataagctctcactaatgaaaattgtatcttcataaac |
23137179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 35246806 - 35246755
Alignment:
Q |
2 |
tatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||| |||| ||||| ||||||||| |||||||||||||| |
|
|
T |
35246806 |
tatgtaaataaataagcttttattttaatttataagccctcactaacgaaaa |
35246755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 14675912 - 14675977
Alignment:
Q |
5 |
gtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||| ||||| |||||||||| || |||| ||||| ||| | |||||||||| |
|
|
T |
14675912 |
gtaaataaataagtttttattttaatttataagctttcgctaatgaaaattgtatcttcataaact |
14675977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25536400 - 25536323
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
||||||||||| |||| ||||| ||||| ||| |||||| ||| ||||||||| | | | |||||||||||||||||| |
|
|
T |
25536400 |
ttatgtaaatagataaatttttattttaatttgtaagctatcattaacgaaaattatgtcttcataaactaccttaaa |
25536323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 44613541 - 44613590
Alignment:
Q |
124 |
atttatttgtatacgctgttttgcataagctcaatccgaacggtccctaa |
173 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||||| ||||| |||||| |
|
|
T |
44613541 |
atttatttgcataagctgttttgcataagctcaatccaaacggaccctaa |
44613590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1312251 - 1312183
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
|||||||||||||||| |||| ||||| ||||||| |||||||||| ||||| ||| | ||||||||| |
|
|
T |
1312251 |
ttatgtaaataaataaacttttattttaatttataaactctcactaatgaaaagtgtatattcataaac |
1312183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16958953 - 16958885
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||| ||||||||| |||| ||||| |||||||||| | ||||||||||| ||| | ||||||||| |
|
|
T |
16958953 |
ttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataaac |
16958885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22032900 - 22032848
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||| |||||||||||||||| | ||| |||||||| ||||||||||||||| |
|
|
T |
22032900 |
ttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaa |
22032848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16932878 - 16932945
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
||||||| ||||||||| |||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
16932878 |
ttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataaa |
16932945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16938261 - 16938328
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
||||||| ||||||||| |||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
16938261 |
ttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataaa |
16938328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47654362 - 47654431
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||| |||||||||||||||| | ||| || ||||| ||||||||||||||| ||| |||||||||| |
|
|
T |
47654362 |
ttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataaact |
47654431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1111387 - 1111351
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataag |
37 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||| |
|
|
T |
1111387 |
ttatgtaaataaataagtttttattttaatttataag |
1111351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19914083 - 19914031
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| | |||||||| | ||||||||||| |
|
|
T |
19914083 |
ttatgtaaataaataagcttttattttaatatataagcttttactaacgaaaa |
19914031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 33288029 - 33288089
Alignment:
Q |
7 |
aaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
|||||||||||||||| | ||| || ||||| | ||||||||||||||||| | ||||||| |
|
|
T |
33288029 |
aaataaataagtttttatgttaattcataagttttcactaacgaaaactgtatcttcataa |
33288089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32165209 - 32165278
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | |||||||||| |
|
|
T |
32165209 |
ttatgtaaataaataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataaact |
32165278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1468312 - 1468243
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||||||||| |
|
|
T |
1468312 |
ttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataaact |
1468243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22708424 - 22708347
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
||||| |||||||||||||||| ||||| ||||||| ||| |||||||||||| ||| | |||||||||||||||||| |
|
|
T |
22708424 |
ttatgcaaataaataagtttttattttaatttataaactcccactaacgaaaattgtatcttcataaactaccttaaa |
22708347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9894913 - 9894844
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||| |||||||||| |
|
|
T |
9894913 |
ttatgtaaataaataagtttttattttaatttataagctctcaataacgaaaattgtaaattcataaact |
9894844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10401751 - 10401828
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
|||| ||| ||||||||||||| ||||| |||||||||||| ||||||||||| ||| | || ||||||||||||||| |
|
|
T |
10401751 |
ttatataactaaataagtttttattttaatttataagctcttactaacgaaaattgtatcttgataaactaccttaaa |
10401828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34223472 - 34223524
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |
|
|
T |
34223472 |
ttatgtaaataaataagtttttattttaatttataagctctcactaacaaaaa |
34223524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10184278 - 10184345
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||| |||||||||||| |||| ||||| |||||||||||| ||||||||||| ||||| |||||||| |
|
|
T |
10184278 |
ttatataaataaataagcttttattttaatttataagctcttactaacgaaaattgtttcttcataaa |
10184345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17300702 - 17300779
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
|||||||||||||||| ||||| ||||| |||||||| | |||||||||||| ||| | ||||||||| |||||||| |
|
|
T |
17300702 |
ttatgtaaataaataactttttattttaatttataagttgtcactaacgaaagttgtatattcataaacaaccttaaa |
17300779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1189521 - 1189453
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||||||||||||| ||| ||||| ||||||| |||||||||||||||| ||| | ||||||||| |
|
|
T |
1189521 |
ttatgtaaataaataagctttaattttaatttataaactctcactaacgaaaagtgtatcttcataaac |
1189453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32615363 - 32615430
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| |||| |||| ||||| |||||| ||||||||||||||||| ||| | |||||||| |
|
|
T |
32615363 |
ttatgtaaataagtaagcttttattttaatttatatgctctcactaacgaaaattgtatcttcataaa |
32615430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21609997 - 21610067
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaacta |
71 |
Q |
|
|
||||| |||||||||||||||| ||||| |||||||| ||| ||||||||||| | | | ||||||||||| |
|
|
T |
21609997 |
ttatgcaaataaataagtttttattttaatttataagttcttactaacgaaaattatatattcataaacta |
21610067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 23314763 - 23314818
Alignment:
Q |
2 |
tatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgt |
57 |
Q |
|
|
|||||||||| |||| |||| ||||| |||||||||||| ||||||||||||||| |
|
|
T |
23314763 |
tatgtaaatatgtaagcttttattttaatttataagctctgactaacgaaaactgt |
23314818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 23324930 - 23324985
Alignment:
Q |
2 |
tatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgt |
57 |
Q |
|
|
|||||||||| |||| |||| ||||| |||||||||||| ||||||||||||||| |
|
|
T |
23324930 |
tatgtaaatatgtaagcttttattttaatttataagctctgactaacgaaaactgt |
23324985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17915083 - 17915017
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
|||| |||||||||||| |||| ||||| | |||||| ||| ||||||||||| ||| ||||||||| |
|
|
T |
17915083 |
ttatataaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa |
17915017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29052470 - 29052422
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacga |
50 |
Q |
|
|
||||||||||||||||| |||| ||||| ||||||||||||||| ||||| |
|
|
T |
29052470 |
ttatgtaaataaataag-ttttattttaatttataagctctcacaaacga |
29052422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15632042 - 15631974
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||| ||||||||||| |
|
|
T |
15632042 |
ttatgtaaataaataagtttttattttaatttatatgctctcactaacgaaaattgtattttcataaac |
15631974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42591520 - 42591450
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaacta |
71 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||| | ||||||||||| |
|
|
T |
42591520 |
ttatgtaaataaataagtttttattttaatttataagctttcactaacgaaaagtgtatcttcataaacta |
42591450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15235109 - 15235177
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||| ||||||||| |
|
|
T |
15235109 |
ttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataaac |
15235177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 8410268 - 8410194
Alignment:
Q |
4 |
tgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaaa |
78 |
Q |
|
|
|||||||||||||| |||| ||||| |||| ||||||||||||||||||| ||| | |||||||||||| ||||| |
|
|
T |
8410268 |
tgtaaataaataagcttttattttaatttacaagctctcactaacgaaaattgtatcttcataaactactttaaa |
8410194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17628373 - 17628441
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||||||||||||| |||| ||||| |||| ||||||||||||||||||| ||| | ||||||||| |
|
|
T |
17628373 |
ttatgtaaataaataagcttttattttaatttagaagctctcactaacgaaaattgtatcttcataaac |
17628441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32497220 - 32497289
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||| | ||||||||| |
|
|
T |
32497220 |
ttatgtaaataaataaacttttattttaatttataagctctcactaacgaaaattgtatcctcataaact |
32497289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15791521 - 15791469
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| |
|
|
T |
15791521 |
ttatgtaaataaataagcttttattttaatttataagctctcattaacgaaaa |
15791469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8061957 - 8062024
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||||||| ||||| ||||| ||||||||||||||| || ||||| ||| | |||||||| |
|
|
T |
8061957 |
ttatgtaaataaataaatttttattttaatttataagctctcacaaatgaaaattgtatcttcataaa |
8062024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16225645 - 16225594
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaa |
52 |
Q |
|
|
|||| ||||||||||||||||||| ||| |||||||| |||||||||||||| |
|
|
T |
16225645 |
ttatttaaataaataagtttttgtgttaatttataagttctcactaacgaaa |
16225594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5243352 - 5243422
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaacta |
71 |
Q |
|
|
||||||||||||||||| |||| ||||| |||||| |||||| ||||||||| ||| | ||||||||||| |
|
|
T |
5243352 |
ttatgtaaataaataagcttttattttaatttatatgctctccgtaacgaaaattgtatcttcataaacta |
5243422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17814328 - 17814262
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||||||||| |||| ||||| | |||||| ||| ||||||||||| ||| ||||||||| |
|
|
T |
17814328 |
ttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa |
17814262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 19395904 - 19395846
Alignment:
Q |
9 |
ataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
|||||||||||||| ||||| |||||||||| ||||||||||||| ||| | ||||||| |
|
|
T |
19395904 |
ataaataagtttttattttaatttataagctttcactaacgaaaattgtatcttcataa |
19395846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17349016 - 17348947
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||| |||||| || ||||| || |||||||||||| |
|
|
T |
17349016 |
ttatgtaaataaataagtttttattttaatttataaactctcagtagagaaaatcgtattttcataaact |
17348947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3116010 - 3116077
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| |||| |||| ||||| |||||||| ||| ||||||||||| ||| | |||||||| |
|
|
T |
3116010 |
ttatgtaaataagtaagcttttattttaatttataagatcttactaacgaaaattgtatcttcataaa |
3116077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 46473163 - 46473116
Alignment:
Q |
55 |
tgttttttcataaactaccttaaagacctcacgaataataaattaaag |
102 |
Q |
|
|
|||||||||||| ||||||||||| |||||| ||||||||||| |||| |
|
|
T |
46473163 |
tgttttttcatatactaccttaaaaacctcatgaataataaataaaag |
46473116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5347292 - 5347226
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||||||||| |||| ||||| | |||||| ||| | ||||||||| ||| ||||||||| |
|
|
T |
5347292 |
ttatgtaaataaataagcttttattttaatctataagttctgattaacgaaaattgtattttcataa |
5347226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22088357 - 22088403
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaa |
47 |
Q |
|
|
|||||||||||||||| |||| ||||| |||||||||||||||||| |
|
|
T |
22088357 |
ttatgtaaataaataaccttttattttaatttataagctctcactaa |
22088403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22103247 - 22103181
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||||| ||| |||| ||||| | |||||| ||| ||||||||||| ||| ||||||||| |
|
|
T |
22103247 |
ttatgtaaataaagaagcttttattttaatctataagttctaactaacgaaaattgtattttcataa |
22103181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 9572853 - 9572902
Alignment:
Q |
124 |
atttatttgtatacgctgttttgcataagctcaatccgaacggtccctaa |
173 |
Q |
|
|
||||||||| | | ||||||||||||||||||||||| ||||| |||||| |
|
|
T |
9572853 |
atttatttgcaaaagctgttttgcataagctcaatccaaacgggccctaa |
9572902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35275846 - 35275898
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||| |||| ||||| ||||||| ||||||||||||||| |
|
|
T |
35275846 |
ttatgtaaataaataaacttttattttaatttataaaatctcactaacgaaaa |
35275898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29614331 - 29614262
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||| | |||||||||| |
|
|
T |
29614331 |
ttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcataaact |
29614262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 29830590 - 29830656
Alignment:
Q |
4 |
tgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| | |||||||||| |
|
|
T |
29830590 |
tgtaaataaataagtttttattttaatttataagttctcactaacgaaaattgtatcttcataaact |
29830656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3645440 - 3645371
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||| | ||||| |||| |
|
|
T |
3645440 |
ttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcatgaact |
3645371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20894640 - 20894571
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||| | ||||| |||| |
|
|
T |
20894640 |
ttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcatgaact |
20894571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1516046 - 1516115
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||| ||||||||| ||||| ||| | || ||||||| |
|
|
T |
1516046 |
ttatgtaaataaataagtttttattttaatttataagttctcactaatgaaaattgtatctttataaact |
1516115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42381208 - 42381277
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||||| ||||||||||| | | | |||||||||| |
|
|
T |
42381208 |
ttatgtaaataattaagtttttattttaatttataagctcttactaacgaaaattttatcttcataaact |
42381277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4257246 - 4257317
Alignment:
Q |
1 |
ttatgtaaataaataagttt--ttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||| || ||||| ||||||||||||||||| |||||| ||| | |||||||||| |
|
|
T |
4257246 |
ttatgtaaataaataagtttgttttttttaatttataagctctcactagcgaaaattgtatcttcataaact |
4257317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42409922 - 42409971
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacga |
50 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||||| |||||||| |
|
|
T |
42409922 |
ttatgtaaataattaagtttttattttaatttataagctcttactaacga |
42409971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42956127 - 42956179
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||| |||||||||||||||| | ||| |||||||| ||||||||||||||| |
|
|
T |
42956127 |
ttatgcaaataaataagtttttatgttaatttataagttctcactaacgaaaa |
42956179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 37778268 - 37778205
Alignment:
Q |
4 |
tgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
|||||||||||||| |||| ||||| |||||||| |||||||||| |||| ||| | ||||||| |
|
|
T |
37778268 |
tgtaaataaataagcttttattttaatttataagttctcactaacaaaaattgtatcttcataa |
37778205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40240525 - 40240591
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||| ||||||||||| |||| | ||| || ||||||||||||||||||||| ||| | ||||||| |
|
|
T |
40240525 |
ttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataa |
40240591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17752079 - 17752148
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||| |||| | ||| |||||||| ||| ||||||||||| ||| | |||||||||| |
|
|
T |
17752079 |
ttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataaact |
17752148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19053399 - 19053468
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||| |||| | ||| |||||||| ||| ||||||||||| ||| | |||||||||| |
|
|
T |
19053399 |
ttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataaact |
19053468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40581024 - 40581089
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcata |
66 |
Q |
|
|
||||| ||||||||||| |||| | ||| || ||||| ||||||||||||||| ||||| |||||| |
|
|
T |
40581024 |
ttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcata |
40581089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10449115 - 10449063
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||| |||||||||||||||| | ||| || ||||| ||||||||||||||| |
|
|
T |
10449115 |
ttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaa |
10449063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12004430 - 12004378
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| ||||||| ||||||| || ||||| |
|
|
T |
12004430 |
ttatgtaaataaataagcttttattttaatttataaactctcacgaaagaaaa |
12004378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24841334 - 24841386
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||| |||||| ||||| ||||| |||||||||||||| |||||||| |
|
|
T |
24841334 |
ttatgtaaacaaataaatttttattttaatttataagctctcaaaaacgaaaa |
24841386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25341408 - 25341332
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactaccttaa |
77 |
Q |
|
|
|||||||||||||||||||||| | ||| || | ||| | || |||||||||| | | | ||||||||||||||||| |
|
|
T |
25341408 |
ttatgtaaataaataagtttttatattaattcacaagttttccctaacgaaaattttatcttcataaactaccttaa |
25341332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42615039 - 42615083
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcact |
45 |
Q |
|
|
||||||||||||||||||||| ||||| ||||||| |||||||| |
|
|
T |
42615039 |
ttatgtaaataaataagttttcattttaatttataaactctcact |
42615083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26003135 - 26003067
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
|||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| | ||||||||| |
|
|
T |
26003135 |
ttatgtaaataaataagtttttattttaatttacaagctctcactaacgaaaattgtatcttcataaac |
26003067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43268584 - 43268658
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaactacctt |
75 |
Q |
|
|
||||| ||||||||||| |||| | ||| |||||||| |||||||||| |||| ||| | ||||||||||||||| |
|
|
T |
43268584 |
ttatgaaaataaataagcttttatgttaatttataagttctcactaacaaaaattgtatcttcataaactacctt |
43268658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4728982 - 4728930
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| |||||||||||| ||||| ||||| |
|
|
T |
4728982 |
ttatgtaaataaataagcttttattttaatttataagctcttactaaggaaaa |
4728930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38461228 - 38461299
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataag--ctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||| ||||||||||| |||| | | | |||||||||| |
|
|
T |
38461228 |
ttatgtaaataaataagtttttattttaatttataagttctctcactaacaaaaattatatcttcataaact |
38461299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20458506 - 20458572
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||||||||| |||| ||||| | |||||| ||| || |||||||| ||| ||||||||| |
|
|
T |
20458506 |
ttatgtaaataaataagcttttattttaatctataagttctgaccaacgaaaattgtattttcataa |
20458572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41419639 - 41419573
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||| |||||||||||||||| | ||| || ||||| ||||||||||||||| ||| | ||||||| |
|
|
T |
41419639 |
ttatgaaaataaataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataa |
41419573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29659198 - 29659129
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||| |||||||||||||||| | ||| || ||||| ||||||||| ||||| ||| ||||||||||| |
|
|
T |
29659198 |
ttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgtactttcataaact |
29659129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 11991436 - 11991376
Alignment:
Q |
7 |
aaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataa |
67 |
Q |
|
|
||||||||||| |||| | ||| ||||||| |||||||||||||||| ||| | ||||||| |
|
|
T |
11991436 |
aaataaataagcttttatgttaatttataaactctcactaacgaaaattgtatgttcataa |
11991376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16722164 - 16722096
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
|||||||||||||| | |||| | ||| ||||||| |||||||||||||||| ||| | ||||||||| |
|
|
T |
16722164 |
ttatgtaaataaatcaacttttatcttaatttataaactctcactaacgaaaagtgtatcttcataaac |
16722096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29418700 - 29418752
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||| |||||||||||||||| | ||| ||||||| ||||||||||||||| |
|
|
T |
29418700 |
ttatgcaaataaataagtttttatcttaatttataaattctcactaacgaaaa |
29418752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11988334 - 11988266
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||||||||||| | |||| ||||| |||||||||||||||||||||||| ||| | ||||||||| |
|
|
T |
11988334 |
ttatgtaaataaatatgcttttattttaatttataagctctcactaacgaaaattgtatcttcataaac |
11988266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12607217 - 12607149
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||||||||||||| |||| ||||| |||||||||||||||||||| ||| ||| | ||||||||| |
|
|
T |
12607217 |
ttatgtaaataaataagcttttattttaatttataagctctcactaacggaaattgtatcttcataaac |
12607149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38338799 - 38338851
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |
|
|
T |
38338799 |
ttatgtaaataaataagtttttattttaatttataagttctcactaacgaaaa |
38338851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19925695 - 19925628
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||||||||| ||| ||||| ||| |||||||||||||||||||| ||| | |||||||| |
|
|
T |
19925695 |
ttatgtaaataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatcttcataaa |
19925628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 218202 - 218269
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
218202 |
ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaa |
218269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 694762 - 694829
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
694762 |
ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaa |
694829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 698971 - 699038
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
698971 |
ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaa |
699038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 731825 - 731892
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
731825 |
ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaa |
731892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 855721 - 855788
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||| ||||||||| ||||| |||||||||| | ||||||||||| ||| | |||||||| |
|
|
T |
855721 |
ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaa |
855788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29218199 - 29218269
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaacta |
71 |
Q |
|
|
||||||||||| |||||||||| ||||| ||||||| |||||||||| ||||| | | | ||||||||||| |
|
|
T |
29218199 |
ttatgtaaatacataagtttttattttaatttataaactctcactaatgaaaattatatcttcataaacta |
29218269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16926676 - 16926745
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
||||| |||||||||||||||| | ||| |||||||| ||||||||||| ||| ||||| || ||||||| |
|
|
T |
16926676 |
ttatgcaaataaataagtttttatgttaatttataagttctcactaacggaaattgtttctttataaact |
16926745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37410861 - 37410930
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||||| | ||||| |||||||| ||| ||||||||||| ||| | ||||| |||| |
|
|
T |
37410861 |
ttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaattgtatcttcatgaact |
37410930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 38195620 - 38195555
Alignment:
Q |
5 |
gtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaact |
70 |
Q |
|
|
|||||||||||||||||| ||||| ||||||| |||||| |||| |||| ||| ||| |||||||| |
|
|
T |
38195620 |
gtaaataaataagtttttattttaatttataaactctcattaacaaaaattgtatttccataaact |
38195555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3664273 - 3664221
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||| |||||| ||||| ||||||||||||| ||||||||| |
|
|
T |
3664273 |
ttatgtaaataaataggtttttattttaatttataagctctcgttaacgaaaa |
3664221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42102244 - 42102192
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| ||||||| |||||| ||||||||| |
|
|
T |
42102244 |
ttatgtaaataaataagcttttattttaatttataacctctcattaacgaaaa |
42102192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42363265 - 42363333
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaac |
69 |
Q |
|
|
||||||||||||||||| |||| ||||| |||| ||| |||||||||| |||| ||| | ||||||||| |
|
|
T |
42363265 |
ttatgtaaataaataagcttttattttaatttaaaagttctcactaacaaaaattgtatcttcataaac |
42363333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32751276 - 32751209
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
|||||||||||||||| ||||| ||||| ||||||| || | ||||||||||| ||| |||| ||||| |
|
|
T |
32751276 |
ttatgtaaataaataaatttttattttaatttataaacttttactaacgaaaattgtatttttataaa |
32751209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35055559 - 35055493
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaactgttttttcataaa |
68 |
Q |
|
|
||||||||||||||||| |||| ||| ||| ||||||||||||||||||||| ||| | |||||||| |
|
|
T |
35055559 |
ttatgtaaataaataagcttttatttaattc-ataagctctcactaacgaaaattgtatcttcataaa |
35055493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35123199 - 35123154
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcacta |
46 |
Q |
|
|
|||| |||||||||||| |||| ||||| ||||||||||||||||| |
|
|
T |
35123199 |
ttatataaataaataagcttttattttaatttataagctctcacta |
35123154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29713315 - 29713267
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacg |
49 |
Q |
|
|
||||||||||||||||| |||| ||||| |||||| |||||||| |||| |
|
|
T |
29713315 |
ttatgtaaataaataagcttttattttaatttatatgctctcaccaacg |
29713267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32212963 - 32213015
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||| ||||||||||| |||| | |||||||||||| ||||||||| ||||| |
|
|
T |
32212963 |
ttatgcaaataaataagcttttatgttattttataagttctcactaatgaaaa |
32213015 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38401 - 38453
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||||| |||| ||||| ||||||||||||| |||||||||| |
|
|
T |
38401 |
ttatgtaaataaataagcttttattttaatttataagctctcgctaacgaaaa |
38453 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 242588 - 242640
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
||||||||||||||| |||||| ||||| ||||||||||||| |||||||||| |
|
|
T |
242588 |
ttatgtaaataaataggtttttattttaatttataagctctcgctaacgaaaa |
242640 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 59405 - 59367
Alignment:
Q |
1 |
ttatgtaaataaataagtttttgttttattttataagct |
39 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
59405 |
ttatgtaaataaataagtttttattttaatttataagct |
59367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 40625 - 40674
Alignment:
Q |
4 |
tgtaaataaataagtttttgttttattttataagctctcactaacgaaaa |
53 |
Q |
|
|
|||||||||||||| |||| ||||| ||||||||||||| ||||||||| |
|
|
T |
40625 |
tgtaaataaataagattttattttaatttataagctctccttaacgaaaa |
40674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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