View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1723_low_29 (Length: 256)
Name: NF1723_low_29
Description: NF1723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1723_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 812601 - 812361
Alignment:
| Q |
2 |
tgtgatgtagagttccaaactactttacattgtaattaactttaatcgataatttgagattagactgttaagattacacatcagttttagtgaagctgta |
101 |
Q |
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| T |
812601 |
tgtgatgtagagttccaaactactttacattgtaattaattttaatcgataatttgagattagactgttaagattacacatcaattttagtgaagctgta |
812502 |
T |
|
| Q |
102 |
tgatctcagccgttaaaccaaatcggacagttgagagtagtaaatgtgccacacaagttaatgcaccaactccaaattcattgcggattctcttagtttg |
201 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
812501 |
tgatctcagccgttaaaccaaatcggacagttgagagaagtaaatgtgccacacaagttaatgcaccaactccaaattcattgtggattctcttagtttg |
812402 |
T |
|
| Q |
202 |
tgatataaactaatatttcatttcattttatattcatctcact |
244 |
Q |
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||| ||||| | |||||||||||||||||||||||| ||||| |
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| T |
812401 |
tgaaataaa--actatttcatttcattttatattcatttcact |
812361 |
T |
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