View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1735-Insertion-7 (Length: 904)

Name: NF1735-Insertion-7
Description: NF1735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1735-Insertion-7
NF1735-Insertion-7
[»] chr8 (29 HSPs)
chr8 (7-904)||(25620907-25621799)
chr8 (7-378)||(25662224-25662596)
chr8 (7-378)||(25808390-25808767)
chr8 (424-763)||(25662649-25662989)
chr8 (687-904)||(25808956-25809171)
chr8 (52-181)||(28771859-28771989)
chr8 (424-479)||(25808822-25808877)
chr8 (463-560)||(3318576-3318673)
chr8 (308-361)||(26735793-26735846)
chr8 (725-789)||(20706541-20706605)
chr8 (7-55)||(25495609-25495657)
chr8 (309-361)||(31214424-31214476)
chr8 (310-361)||(23800829-23800880)
chr8 (305-368)||(28902612-28902675)
chr8 (310-367)||(15969737-15969794)
chr8 (308-361)||(18157667-18157720)
chr8 (310-367)||(19460407-19460464)
chr8 (310-367)||(19558085-19558142)
chr8 (308-361)||(45292031-45292084)
chr8 (309-361)||(3842936-3842988)
chr8 (309-361)||(8031203-8031255)
chr8 (309-361)||(16746411-16746463)
chr8 (309-361)||(17519971-17520023)
chr8 (310-361)||(6319336-6319387)
chr8 (308-367)||(22167836-22167895)
chr8 (310-361)||(23270754-23270805)
chr8 (310-361)||(30422341-30422391)
chr8 (307-361)||(19957248-19957302)
chr8 (457-538)||(20704139-20704221)
[»] scaffold0466 (1 HSPs)
scaffold0466 (7-902)||(4839-5743)
[»] chr1 (19 HSPs)
chr1 (48-309)||(32972750-32973013)
chr1 (478-561)||(10650033-10650116)
chr1 (310-361)||(20442141-20442192)
chr1 (310-362)||(13223382-13223434)
chr1 (310-366)||(26549086-26549142)
chr1 (309-361)||(39586300-39586352)
chr1 (309-361)||(51630014-51630066)
chr1 (310-361)||(14388954-14389004)
chr1 (310-361)||(17370198-17370249)
chr1 (310-361)||(17956571-17956622)
chr1 (310-361)||(18311799-18311850)
chr1 (310-361)||(18382728-18382779)
chr1 (306-361)||(19171198-19171252)
chr1 (310-361)||(23058751-23058802)
chr1 (692-767)||(34487947-34488022)
chr1 (310-361)||(46181680-46181730)
chr1 (309-367)||(20250962-20251020)
chr1 (309-362)||(5843151-5843204)
chr1 (311-351)||(12396964-12397002)
[»] chr5 (34 HSPs)
chr5 (668-785)||(25954834-25954951)
chr5 (459-562)||(22641907-22642010)
chr5 (310-361)||(35544002-35544053)
chr5 (425-562)||(17772124-17772262)
chr5 (308-361)||(13522416-13522469)
chr5 (309-362)||(14456918-14456971)
chr5 (309-361)||(2157161-2157212)
chr5 (309-361)||(19464874-19464926)
chr5 (309-361)||(19478904-19478956)
chr5 (309-361)||(20216048-20216100)
chr5 (309-361)||(20552717-20552769)
chr5 (309-361)||(21420070-21420122)
chr5 (309-361)||(21705271-21705323)
chr5 (309-361)||(23487742-23487794)
chr5 (309-361)||(24982720-24982772)
chr5 (309-361)||(25112810-25112862)
chr5 (309-361)||(25171901-25171953)
chr5 (309-361)||(34052861-34052913)
chr5 (310-361)||(13546419-13546470)
chr5 (310-361)||(17446005-17446055)
chr5 (310-361)||(20625667-20625718)
chr5 (310-361)||(23407347-23407398)
chr5 (310-361)||(30069209-30069260)
chr5 (310-361)||(35932898-35932949)
chr5 (308-361)||(90326-90377)
chr5 (459-521)||(19761125-19761187)
chr5 (307-361)||(37395359-37395412)
chr5 (309-367)||(40033667-40033724)
chr5 (309-361)||(11208905-11208958)
chr5 (308-361)||(15439491-15439544)
chr5 (312-361)||(20168940-20168989)
chr5 (309-362)||(35216405-35216458)
chr5 (309-362)||(37739873-37739926)
chr5 (308-361)||(42395885-42395938)
[»] chr7 (23 HSPs)
chr7 (458-561)||(11693599-11693701)
chr7 (444-561)||(31270613-31270731)
chr7 (442-552)||(24676972-24677083)
chr7 (309-362)||(11004566-11004619)
chr7 (852-901)||(23135408-23135457)
chr7 (308-361)||(38404073-38404126)
chr7 (309-361)||(9169572-9169624)
chr7 (309-361)||(13027864-13027915)
chr7 (309-361)||(14186879-14186931)
chr7 (309-361)||(26210409-26210461)
chr7 (309-361)||(30025127-30025179)
chr7 (310-361)||(1292247-1292298)
chr7 (310-361)||(11087954-11088005)
chr7 (310-361)||(13138838-13138889)
chr7 (466-561)||(13258626-13258721)
chr7 (466-561)||(13265966-13266061)
chr7 (310-361)||(40055613-40055664)
chr7 (733-801)||(13258842-13258911)
chr7 (733-801)||(13266182-13266251)
chr7 (307-361)||(21770804-21770858)
chr7 (307-357)||(24450626-24450676)
chr7 (309-350)||(21621233-21621274)
chr7 (310-351)||(32265632-32265673)
[»] chr4 (22 HSPs)
chr4 (51-205)||(4890286-4890442)
chr4 (457-560)||(24716430-24716533)
chr4 (692-785)||(35150731-35150825)
chr4 (668-785)||(6115864-6115981)
chr4 (310-367)||(23508564-23508621)
chr4 (309-361)||(11535267-11535319)
chr4 (308-360)||(12605844-12605896)
chr4 (309-361)||(14190272-14190324)
chr4 (310-361)||(10290048-10290099)
chr4 (310-361)||(10299957-10300008)
chr4 (692-767)||(17743354-17743429)
chr4 (310-361)||(20976646-20976697)
chr4 (310-361)||(47152835-47152886)
chr4 (310-361)||(55650746-55650797)
chr4 (308-361)||(14779271-14779325)
chr4 (308-361)||(3370131-3370184)
chr4 (309-351)||(8501693-8501737)
chr4 (308-361)||(11514457-11514509)
chr4 (310-351)||(16631631-16631672)
chr4 (308-361)||(19570438-19570490)
chr4 (308-361)||(24628763-24628816)
chr4 (309-362)||(24639666-24639719)
[»] chr3 (34 HSPs)
chr3 (692-777)||(2120746-2120829)
chr3 (48-124)||(15674056-15674132)
chr3 (309-376)||(6491111-6491178)
chr3 (70-180)||(25021906-25022017)
chr3 (308-361)||(12967509-12967562)
chr3 (308-361)||(14322470-14322523)
chr3 (309-362)||(28315017-28315070)
chr3 (309-362)||(38204657-38204710)
chr3 (309-362)||(39382089-39382142)
chr3 (310-366)||(6501775-6501831)
chr3 (310-362)||(8774056-8774108)
chr3 (309-361)||(8996736-8996788)
chr3 (309-361)||(9982666-9982718)
chr3 (309-361)||(12238395-12238447)
chr3 (309-361)||(15848299-15848350)
chr3 (309-361)||(21640034-21640086)
chr3 (309-361)||(29461997-29462049)
chr3 (309-361)||(29934342-29934394)
chr3 (309-361)||(29983496-29983548)
chr3 (310-362)||(38194123-38194175)
chr3 (310-361)||(933027-933078)
chr3 (310-361)||(9007288-9007339)
chr3 (310-361)||(13953456-13953507)
chr3 (310-361)||(15832565-15832616)
chr3 (310-361)||(23635110-23635161)
chr3 (310-361)||(27882787-27882838)
chr3 (310-361)||(29854607-29854658)
chr3 (310-361)||(38314097-38314148)
chr3 (310-361)||(51989972-51990023)
chr3 (311-361)||(16031701-16031750)
chr3 (460-562)||(55212524-55212625)
chr3 (312-361)||(14580541-14580590)
chr3 (132-177)||(15686563-15686608)
chr3 (733-778)||(27592672-27592717)
[»] scaffold0039 (1 HSPs)
scaffold0039 (48-101)||(103587-103640)
[»] chr2 (23 HSPs)
chr2 (39-180)||(12766471-12766610)
chr2 (309-367)||(22773733-22773791)
chr2 (310-361)||(20319511-20319562)
chr2 (308-361)||(27979180-27979233)
chr2 (308-361)||(28065709-28065762)
chr2 (309-362)||(35262964-35263017)
chr2 (309-362)||(35273589-35273642)
chr2 (309-361)||(18769704-18769756)
chr2 (309-361)||(19303227-19303279)
chr2 (309-361)||(24815376-24815428)
chr2 (310-362)||(27220755-27220807)
chr2 (309-361)||(28722117-28722169)
chr2 (310-362)||(35252356-35252408)
chr2 (310-361)||(19498769-19498820)
chr2 (310-361)||(22763029-22763080)
chr2 (310-361)||(24274404-24274455)
chr2 (306-361)||(24778521-24778576)
chr2 (310-361)||(26866450-26866501)
chr2 (310-361)||(38586887-38586938)
chr2 (462-520)||(16195759-16195817)
chr2 (308-361)||(19313792-19313845)
chr2 (457-510)||(26275628-26275681)
chr2 (309-362)||(26654243-26654295)
[»] scaffold0349 (1 HSPs)
scaffold0349 (309-361)||(10139-10191)
[»] scaffold0084 (1 HSPs)
scaffold0084 (309-361)||(57605-57657)
[»] scaffold0570 (1 HSPs)
scaffold0570 (310-361)||(312-363)
[»] chr6 (28 HSPs)
chr6 (309-368)||(18554649-18554708)
chr6 (307-361)||(27372180-27372234)
chr6 (307-361)||(27462530-27462584)
chr6 (308-361)||(12827046-12827099)
chr6 (308-361)||(18926555-18926608)
chr6 (310-362)||(11021312-11021364)
chr6 (309-361)||(11147982-11148034)
chr6 (309-361)||(11205324-11205376)
chr6 (309-361)||(17063581-17063633)
chr6 (309-361)||(17609246-17609298)
chr6 (309-361)||(21127390-21127442)
chr6 (309-361)||(27505292-27505344)
chr6 (309-361)||(28357503-28357555)
chr6 (309-361)||(31930801-31930852)
chr6 (310-361)||(9717020-9717071)
chr6 (310-361)||(15532534-15532585)
chr6 (310-361)||(17573216-17573267)
chr6 (310-361)||(17742496-17742547)
chr6 (310-361)||(21118967-21119018)
chr6 (310-361)||(25583264-25583315)
chr6 (310-361)||(25687543-25687594)
chr6 (310-361)||(31571769-31571820)
chr6 (310-352)||(11234847-11234889)
chr6 (309-351)||(19687927-19687969)
chr6 (308-361)||(12352930-12352982)
chr6 (308-361)||(15395563-15395616)
chr6 (310-367)||(19453454-19453510)
chr6 (309-361)||(27720720-27720773)
[»] scaffold0443 (1 HSPs)
scaffold0443 (309-367)||(1875-1933)
[»] scaffold0017 (1 HSPs)
scaffold0017 (309-367)||(41206-41264)
[»] scaffold0382 (1 HSPs)
scaffold0382 (309-361)||(2112-2164)
[»] scaffold0090 (2 HSPs)
scaffold0090 (309-361)||(52-104)
scaffold0090 (309-361)||(4435-4487)
[»] scaffold0068 (1 HSPs)
scaffold0068 (309-361)||(8587-8639)
[»] scaffold0042 (1 HSPs)
scaffold0042 (309-361)||(4680-4732)
[»] scaffold0018 (1 HSPs)
scaffold0018 (309-361)||(7350-7402)
[»] scaffold0859 (1 HSPs)
scaffold0859 (310-361)||(2166-2216)
[»] scaffold0839 (1 HSPs)
scaffold0839 (310-361)||(5271-5322)
[»] scaffold0771 (1 HSPs)
scaffold0771 (310-361)||(5596-5647)
[»] scaffold0747 (1 HSPs)
scaffold0747 (310-361)||(2073-2124)
[»] scaffold0509 (1 HSPs)
scaffold0509 (310-361)||(12218-12269)
[»] scaffold0199 (1 HSPs)
scaffold0199 (310-361)||(17715-17766)
[»] scaffold0142 (1 HSPs)
scaffold0142 (310-361)||(39887-39938)
[»] scaffold0133 (1 HSPs)
scaffold0133 (310-361)||(43345-43396)
[»] scaffold0072 (1 HSPs)
scaffold0072 (310-361)||(37556-37607)
[»] scaffold0050 (1 HSPs)
scaffold0050 (310-361)||(34810-34861)
[»] scaffold0163 (1 HSPs)
scaffold0163 (309-367)||(28853-28911)
[»] scaffold0132 (1 HSPs)
scaffold0132 (310-360)||(38990-39040)
[»] scaffold0005 (1 HSPs)
scaffold0005 (308-361)||(60405-60459)
[»] scaffold0627 (1 HSPs)
scaffold0627 (308-361)||(8890-8943)
[»] scaffold0273 (1 HSPs)
scaffold0273 (310-351)||(4887-4928)
[»] scaffold0011 (2 HSPs)
scaffold0011 (309-361)||(145311-145364)
scaffold0011 (310-351)||(250845-250885)
[»] scaffold0010 (1 HSPs)
scaffold0010 (310-359)||(60888-60937)
[»] scaffold0004 (1 HSPs)
scaffold0004 (308-361)||(378415-378468)


Alignment Details
Target: chr8 (Bit Score: 725; Significance: 0; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 725; E-Value: 0
Query Start/End: Original strand, 7 - 904
Target Start/End: Original strand, 25620907 - 25621799
Alignment:
Q  7 aaatttaactacgcaaacggaagatgtcaaaaccatgatggatcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25620907 aaatttaactacgcaaacggaagatgtcaaaaccatgatggatcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaa 25621006  T
Q  107 tcctatttatcgacattagaaccttgtgatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatattatatcctttttctaaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25621007 tcctatttatcgacattagaaccttgtgatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatattatatcctttttctaaa 25621106  T
Q  207 agctttcctcatctcaaagtactattctttaagtttgggacataatagacatttgaaatcaactcaagtcattcatttttcaaacaaattaagatattat 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25621107 agctttcctcatctcaaagtactattctttaagtttgggacataatagacatttgaaatcaactcaagtcatccatttttcaaacaaattaagatattat 25621206  T
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaatctctttctaacaaaacaaagaaatcaagataatcnnnn 406  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||        
T  25621207 ctttgaaggtgagaaaaacacaagaagatgaggttgaattgtgttccctttttttgaaaaa--tctttctaacaaaacaaagaaatcaagataatcaaag 25621304  T
Q  407 nnnnnnnnnnnnnnnnncaacacaagctgttattctagttcaccctaaaatcgaggttagtccagtcaccttgtacttttaagggattttccactataat 506  Q
                     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25621305 agagatagagatagagacaacacaagctgttattctagttcaccctaaaatcgaggttagtccagacaccttgtacttttaagggattttccactataat 25621404  T
Q  507 cacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcacacatatccattcttcaataaaatattaaaaataaaattgattgttta 606  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25621405 cacaaaggattataattacataaacacacaagcctaaaatttccttgcctcacacatatccattcttcaataaaatattaaaaataaaattgattgttta 25621504  T
Q  607 cattttgtactcaaagaacagtaaactaaacttaaagctcaattaacnnnnnnnatactttagaaattccaagatatagagtttctaagaattttctaag 706  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  25621505 cattttgtacccaaagaacggtaaactaaacttaaagctcaattaac-ttttttatactttagaaattccaagatatagagtttctaagaattttctaag 25621603  T
Q  707 tctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctcttatgttcgtcaaactactcagg-tcttaaatatgagagaat 805  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25621604 tctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctcttatgttcgtcaaactactcaggttcttaaatatgagagaat 25621703  T
Q  806 gaaagagtagtcgctatttgaagaatgcgagcacgtccaaatcgtctttgagaaactttgattaggtttgaaatatttttcctctaatggataatttcg 904  Q
    |||||   ||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25621704 gaaag---agtcgttatttgaagaatgctagcacatccaaatcgtctttgagaaactttcattaggtttgaaatatttttcctctaatggataatttcg 25621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 7 - 378
Target Start/End: Original strand, 25662224 - 25662596
Alignment:
Q  7 aaatttaactacgcaaacggaagatgtcaaaaccatgatggatcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaa 106  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||    
T  25662224 aaatttaactacccaaatggaagatgtcaaaaccatgatggatcattgtagcaagctttgatacatttttccacattattttttatattcaacaataaaa 25662323  T
Q  107 tcctatttatcgacattagaaccttg-tgatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatattatatcctttttctaa 205  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25662324 tcctatttatcgacattagaaccttggtgatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatatcatatcctttttctaa 25662423  T
Q  206 aagctttcctcatctcaaagtactattctttaagtttgggacataatagacatttgaaatcaactcaagtcattcatttttcaaacaaattaagatatta 305  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25662424 aagctttcctcatctaaaagtacgattctttaagtttgggacatgatagacatttgaaatcaactcaggtcatccatttttcaaacaaattaagatatta 25662523  T
Q  306 tctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaatctctttctaa 378  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  25662524 tctttgaaggtgagaaaaacataagaagatggagttgaattgtgttgcccttttctgaaaaatctctttctaa 25662596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 7 - 378
Target Start/End: Original strand, 25808390 - 25808767
Alignment:
Q  7 aaatttaactacgcaaacggaagatgtcaaaaccatgatggatcatt---gtagcaagctttgatacatttttccacatcattttggatattcaacaaca 103  Q
    |||||||||||  |||| ||||||||| || ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| | |    
T  25808390 aaatttaactatccaaatggaagatgtaaacaccatgatggatcattattgtagcaagctttgatacatttttccacatcattttggatattcaaccata 25808489  T
Q  104 aaatcctatttatcgacattagaacc---ttgtgatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatattatatcctttt 200  Q
    ||||||||||||||||||||| ||||   | |||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||    
T  25808490 aaatcctatttatcgacattaaaaccccttggtgatgagattatttttctcatatttgatggagataattgaatctttcaacttaatatcatattctttt 25808589  T
Q  201 tctaaaagctttcctcatctcaaagtactattctttaagtttgggacataatagacatttgaaatcaactcaagtcattcatttttcaaacaaattaaga 300  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||    
T  25808590 tctaaaacttttcctcatctcaaagtactattctttaagtttgggatataatagacatttgaaatcaactcaggtcatccatttttcgaacaatttaaga 25808689  T
Q  301 tattatctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaatctctttctaa 378  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||| |||||||    
T  25808690 tattatctttgaaggtgagaaaaacataagaagatggggttgaattgtgttgcctttttctgaaaaatctatttctaa 25808767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 424 - 763
Target Start/End: Original strand, 25662649 - 25662989
Alignment:
Q  424 caacacaagctgttattctagttcaccctaaaatcgaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaatt 523  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| || ||||||||||||||    
T  25662649 caacacaagctattattctagatcatcctaaaatcgaggttagtctagtcaccttgaacttttaagggatttttcactataaccataaaggattacaatt 25662748  T
Q  524 acgtaaacacacaagcctaaaatttccttgcctcacacatatcca-ttcttcaataaaatattaaaaataaaattgattgtttacattttgtactcaaag 622  Q
    ||||| |||||||||||||||||||||||||||||||||| |  | ||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  25662749 acgtagacacacaagcctaaaatttccttgcctcacacatgtggaattctaaaatcaaatattaaaaataaaattgattgtttactttttgtactcaaag 25662848  T
Q  623 aacagtaaactaaacttaaagctcaattaacnnnnnnnatactttagaaattccaagatatagagtttctaagaattttctaagtctttgtgcactttat 722  Q
    ||| ||| |||||||||||||||||||| ||       |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  25662849 aacggtatactaaacttaaagctcaattgactttttttatacttaagaaattccaagatacagagtttctaagaattttctaagtctttgtgcactttgt 25662948  T
Q  723 attttgacagagttttggcacttttaaattatgtgaagtct 763  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  25662949 attttgacagagttttggcacttgtaaattatgtgaagtct 25662989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 687 - 904
Target Start/End: Original strand, 25808956 - 25809171
Alignment:
Q  687 gtttctaagaattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctcttatgttcgtcaaactactcag 786  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||    
T  25808956 gtttctaagaattttctaagtctttgtgaactttgtattttgacagagttttggcacttgtcaattatgtgaagtctcttatgttcttcaaactactcag 25809055  T
Q  787 gt-cttaaatatgagagaatgaaagagtagtcgctatttgaagaatgcgagcacgtccaaatcgtctttgagaaactttgattaggtttgaaatattttt 885  Q
    || |||||||||||||||||||||||||  |   |||||||||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||    
T  25809056 gttcttaaatatgagagaatgaaagagtcat---tatttgaagaatgcgagcaaatcaaaatcgtctttgggaaactttgattaggtttgaaatattttt 25809152  T
Q  886 cctctaatggataatttcg 904  Q
    |||||||||||||||||||    
T  25809153 cctctaatggataatttcg 25809171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 28771859 - 28771989
Alignment:
Q  52 ttgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaatcctatttatcgacattagaaccttg-tgatgagattatttttct 150  Q
    |||| ||||||||||| | ||||| | ||||||||||||| ||||||||| ||  |  ||||| | |||||| | |||||| ||||| ||||||||||||    
T  28771859 ttgtggcaagctttgagatattttgcaacatcattttggacattcaacaagaacgttttatttcttgacattggtaccttgatgatgtgattatttttct 28771958  T
Q  151 catatttgatggagatacttaaatctttcaa 181  Q
    ||||||||||||||| |||||||| ||||||    
T  28771959 catatttgatggagagacttaaatatttcaa 28771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 479
Target Start/End: Original strand, 25808822 - 25808877
Alignment:
Q  424 caacacaagctgttattctagttcaccctaaaatcgaggttagtccagtcaccttg 479  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  25808822 caacacaagtttttattctagttcaccctaaaatcgaggttagtcaagtcaccttg 25808877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 463 - 560
Target Start/End: Original strand, 3318576 - 3318673
Alignment:
Q  463 ttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcaca 560  Q
    ||||||||||| | ||| ||||  |||||||||||||| ||||||||| | |||||||||||| || || |||||  |||| |||| |||||||||||    
T  3318576 ttagtccagtctctttgcacttccaagggattttccacaataatcacacaagattacaattacttagacgcacaactctaagatttacttgcctcaca 3318673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 26735846 - 26735793
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  26735846 tttgaaggtgagaaaaacacaagaagagggggttgaattgtgttttctttttct 26735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 789
Target Start/End: Original strand, 20706541 - 20706605
Alignment:
Q  725 tttgacagagttttggcacttttaaattatgtgaagtctcttatgttcgtcaaactactcaggtc 789  Q
    ||||||||||||||| ||||| |||||||||||||||| |||| |||| ||||||| || |||||    
T  20706541 tttgacagagttttgacacttgtaaattatgtgaagtcacttaagttcttcaaactgcttaggtc 20706605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 25495609 - 25495657
Alignment:
Q  7 aaatttaactacgcaaacggaagatgtcaaaaccatgatggatcattgt 55  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  25495609 aaatttaactacccaaatggaagatgtcaaaaccatgacggatcattgt 25495657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 31214424 - 31214476
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  31214424 ttgaaggtgagaaaaacacaagaagggggagttgaattgtgttttctttttct 31214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 23800829 - 23800880
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  23800829 tgaaggtgagaaaaacacaagaagggggagttgaattgtgttttctttttct 23800880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 305 - 368
Target Start/End: Original strand, 28902612 - 28902675
Alignment:
Q  305 atctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaat 368  Q
    |||||||||||||||||||||||||| ||  |  |||||||||||||| |||||||| ||||||    
T  28902612 atctttgaaggtgagaaaaacacaaggagggggggttgaattgtgttttctttttctcaaaaat 28902675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 15969794 - 15969737
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  15969794 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaa 15969737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 18157667 - 18157720
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  18157667 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 18157720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 19460407 - 19460464
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  19460407 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaa 19460464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 19558085 - 19558142
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  19558085 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaa 19558142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 45292031 - 45292084
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  | ||||||||||||||  ||||||||    
T  45292031 tttgaaggtgagaaaaacacaagaagggggagttgaattgtgttagctttttct 45292084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 3842936 - 3842988
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  3842936 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 3842988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 8031203 - 8031255
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  8031203 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 8031255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 16746411 - 16746463
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  16746411 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 16746463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 17520023 - 17519971
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17520023 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17519971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 6319387 - 6319336
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  6319387 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 6319336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 22167895 - 22167836
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    ||||||||||||||||||||||||||  |   ||||||||||||| |||||||| |||||    
T  22167895 tttgaaggtgagaaaaacacaagaaggggggtttgaattgtgttttctttttctcaaaaa 22167836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 23270805 - 23270754
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  23270805 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 23270754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 30422391 - 30422341
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  30422391 tgaaggtgagaaaaacacaagaaga-ggggttgaattgtgtttgctttttct 30422341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 19957302 - 19957248
Alignment:
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||||  ||  ||||||||||||  ||||||||    
T  19957302 ctttgaaggtgagaaaaacacaagaaggggagattgaattgtgttagctttttct 19957248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 538
Target Start/End: Original strand, 20704139 - 20704221
Alignment:
Q  457 tcgaggttagtccagtcaccttgtacttt-taagggattttccactataatcacaaaggattacaattacgtaaacacacaag 538  Q
    ||||||||||||||||| ||||| ||||| |||  |||||||||||| ||||||| | |||||||| | |  |||||||||||    
T  20704139 tcgaggttagtccagtccccttgcactttctaatagattttccactacaatcacacaagattacaactgctcaaacacacaag 20704221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 602; Significance: 0; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 7 - 902
Target Start/End: Complemental strand, 5743 - 4839
Alignment:
Q  7 aaatttaactacgcaaacggaagatgtcaaaaccatgatggatcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaa 106  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  5743 aaatttaactacccaaatggaagatgtcaaaaccatgatggatcattgtagcaagctttgatacatttttccacatcattttggatactcaacaataaaa 5644  T
Q  107 tcctatttatcgacattagaaccttg-tgatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatattatatcctttttctaa 205  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5643 tcctatttatcgacattagaaccttggttatgagattatttttctcatatttgatggagatacttaaatctttcaacttaatatcatatcctttttctaa 5544  T
Q  206 aagctttcctcatctcaaagtactattctttaagtttgggacataatagacatttgaaatcaactcaagtcattcatttttcaaacaaattaagatatta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5543 aagctttcctcatctcaaagtactattctttaagtttgggacataatagacatttgaaatcaactcaggtcatccatttttcaaacaaattaagatatta 5444  T
Q  306 tctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaatctctttcta---------acaaaacaaagaaatcaag 396  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||         |||||||| ||||| ||||    
T  5443 tctttgaaggtgagaaaaacacaagaagatggagttgaattgtgttgcctttttctgaaaaatctctttctaaatgtttaaacaaaacatagaaagcaag 5344  T
Q  397 ataatcnnnnnnnnnnnnnnnnnnnnncaacacaagctgttattctagttcaccctaaaatcgaggttagtccagtcaccttgtacttttaagggatttt 496  Q
    ||||||                     ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  5343 ataatcagagagagatagagatagagacaacctaagctattattctagttcaccctaaaatcgaggttagtccagtcaccttacacttttaagggatttt 5244  T
Q  497 ccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcacacatatcc-attcttcaataaaatattaaaaataaaa 595  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |   |||||  |||||||||||||||||||||    
T  5243 tcactataatcacaaaggattacaattacgtagacacacaagcctaaaatttccttgcctcatacatgtgggattctaaaataaaatattaaaaataaaa 5144  T
Q  596 ttgattgtttacattttgtactcaaagaacagtaaactaaacttaaagctcaattaacnnnnnnnatactttagaaattccaagatatagagtttctaag 695  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||  |||||||||||||||||||||||||||    
T  5143 ttgattgtttacattttgtactcaaagaacggtaaactaaacttaaagctcaattgactttttttatacttaggaaattccaagatatagagtttctaag 5044  T
Q  696 aattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctcttatgttcgtcaaactactcagg-tcttaaa 794  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||| |||||||    
T  5043 aattttctaagtctttgcgcactttatattttgacagagttttgacacttgtaaattatgtgaagtctcttatgttcttcgaactgctcaggttcttaaa 4944  T
Q  795 tatgagagaatgaaagagtagtcgctatttgaagaatgcgagcacgtccaaatcgtctttgagaaactttgattaggtttgaaatatttttcctctaatg 894  Q
    ||||||||||||||||   ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4943 tatgagagaatgaaag---agtcgttatttgaagaatgcgagcacatcaaaatcgtctttgagaaactttgattaggtttgaaatatttttcctctaatg 4847  T
Q  895 gataattt 902  Q
    ||||||||    
T  4846 gataattt 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 7e-30; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 48 - 309
Target Start/End: Complemental strand, 32973013 - 32972750
Alignment:
Q  48 atcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaatccta-tttatcgacattagaacctt-gtgatgagattatt 145  Q
    ||||||| |||||| ||||||||||||| | ||||||||||||||||| ||||| || ||| || ||| | |||||| | ||||| || |||||| ||||    
T  32973013 atcattgcagcaagttttgatacattttacaacatcattttggatattaaacaataacatcttattttcttgacattggtaccttggttatgagaatatt 32972914  T
Q  146 tttctcatatttgatggagatacttaaatctttcaacttaatattatatcctttttctaaaagctttcctcatctcaaagtactattctttaagtttggg 245  Q
    |||  ||| ||| ||||| | ||||||||||||||| | |||||  |||| |||||||||||| | ||||    ||||| || ||||||| | ||||| |    
T  32972913 ttttccatctttcatggaaagacttaaatctttcaagtaaatatcctatcttttttctaaaagttgtcctagggtcaaaatattattcttcatgtttgag 32972814  T
Q  246 acataatagacatttgaaatcaactcaagtcattcatttttcaaacaaattaagatattatctt 309  Q
    |||||||||||||||||||| || ||| ||| |  || ||||||  ||||||||||||||||||    
T  32972813 acataatagacatttgaaataaaatcacgtcttcaatatttcaagtaaattaagatattatctt 32972750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 561
Target Start/End: Complemental strand, 10650116 - 10650033
Alignment:
Q  478 tgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcacac 561  Q
    ||||||| |||| |||||||||| ||||||| | | |||||||||||| |||||||||||| |||||||||||||  |||||||    
T  10650116 tgtacttctaagagattttccacgataatcatacaagattacaattacttaaacacacaagtctaaaatttccttatctcacac 10650033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 20442192 - 20442141
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  20442192 tgaaggtgagaaaaacacaagaagggggagttgaattgtgttttctttttct 20442141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 13223382 - 13223434
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  13223382 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 13223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 26549142 - 26549086
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaa 366  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| ||||    
T  26549142 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaa 26549086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 39586300 - 39586352
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  39586300 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 39586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 51630066 - 51630014
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  51630066 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 51630014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 14389004 - 14388954
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  14389004 tgaaggtgagaaaaacacaagaaggag-agttgaattgtgttttctttttct 14388954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 17370198 - 17370249
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17370198 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 17956571 - 17956622
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17956571 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17956622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 18311850 - 18311799
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  18311850 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 18311799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 18382779 - 18382728
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  18382779 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 18382728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 19171252 - 19171198
Alignment:
Q  306 tctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  19171252 tctttgaaggtgagaaaaacacaagaag-gggggttgaattgtgttttctttttct 19171198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 23058751 - 23058802
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  23058751 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 23058802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 767
Target Start/End: Original strand, 34487947 - 34488022
Alignment:
Q  692 taagaattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctctta 767  Q
    |||||||||||||||| ||||| | ||||  | ||||||||||||||| |||||||||| | | || |||||||||    
T  34487947 taagaattttctaagtgtttgtacgcttttgaatttgacagagttttgacacttttaaaatctatgcagtctctta 34488022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 46181730 - 46181680
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  46181730 tgaaggtgagaaaaacacaagaaga-ggggttgaattgtgttttctttttct 46181680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 20250962 - 20251020
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||| ||| |||||    
T  20250962 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttctctaaaaaa 20251020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 5843151 - 5843204
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||| ||||||||||||||||  |  |||||||||||||| |||||||||    
T  5843151 ttgaaggttagaaaaacacaagaagggggggttgaattgtgttttctttttctg 5843204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 12396964 - 12397002
Alignment:
Q  311 gaaggtgagaaaaacacaagaagatgaagttgaattgtgtt 351  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  12396964 gaaggtgagaaaaacacaagaagat--agttgaattgtgtt 12397002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 3e-26; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 668 - 785
Target Start/End: Complemental strand, 25954951 - 25954834
Alignment:
Q  668 agaaattccaagatatagagtttctaagaattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctctta 767  Q
    |||||||| |||||||| ||||| |||||||||||||||| ||||||||||||  | ||||||||||||||| ||||| |||| ||||||||||||| ||    
T  25954951 agaaattctaagatataaagtttgtaagaattttctaagtgtttgtgcacttttaaatttgacagagttttgacacttgtaaaatatgtgaagtctcata 25954852  T
Q  768 tgttcgtcaaactactca 785  Q
     |||| ||||||| ||||    
T  25954851 agttcttcaaacttctca 25954834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 562
Target Start/End: Original strand, 22641907 - 22642010
Alignment:
Q  459 gaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctca 558  Q
    ||||||||||||||  |  ||| ||| ||| ||||||| || | |||||||| | |||||||||||| |||||||||||| |||| ||||||||||||||    
T  22641907 gaggttagtccagttcctgtgtgcttctaacggatttttcagtgtaatcacacaagattacaattacttaaacacacaagtctaagatttccttgcctca 22642006  T
Q  559 caca 562  Q
    ||||    
T  22642007 caca 22642010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 35544053 - 35544002
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||| ||||||||    
T  35544053 tgaaggtgagaaaaacacaagaaggggaggttgaattgtgttttctttttct 35544002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 562
Target Start/End: Complemental strand, 17772262 - 17772124
Alignment:
Q  425 aacacaagctgttattctagttcaccctaaaat-cgaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaatt 523  Q
    |||||||||  |||| |||||||| |||| ||| ||| ||| ||||| || ||||| ||||| ||   ||||||||||||||||| |||  |||||||||    
T  17772262 aacacaagcaattatcctagttcatcctacaattcgatgttggtccaatctccttgcactttcaaaaaattttccactataatcataaaatattacaatt 17772163  T
Q  524 acgtaaacacacaagcctaaaatttccttgcctcacaca 562  Q
    || || ||||||||   ||| ||||| ||||||||||||    
T  17772162 acttagacacacaaatataagatttctttgcctcacaca 17772124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 13522416 - 13522469
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  13522416 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 13522469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 14456918 - 14456971
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  14456918 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 14456971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 2157212 - 2157161
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  || |||||||||||||| ||||||||    
T  2157212 ttgaaggtgagaaaaacacaagaag-ggaggttgaattgtgttttctttttct 2157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 19464926 - 19464874
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  19464926 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 19464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 19478956 - 19478904
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  19478956 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 19478904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 20216100 - 20216048
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  20216100 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 20216048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 20552769 - 20552717
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  20552769 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 20552717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 21420070 - 21420122
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  21420070 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 21420122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 21705271 - 21705323
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  21705271 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 21705323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 23487742 - 23487794
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  23487742 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 23487794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 24982720 - 24982772
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  24982720 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 24982772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 25112862 - 25112810
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  25112862 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 25112810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 25171953 - 25171901
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  25171953 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 25171901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 34052913 - 34052861
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  34052913 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 34052861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 13546470 - 13546419
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||    |||||||||||||| ||||||||    
T  13546470 tgaaggtgagaaaaacacaagaagagtgggttgaattgtgtttactttttct 13546419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 17446005 - 17446055
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||| ||||||||    
T  17446005 tgaaggtgagaaaaacacaagaag-ggaggttgaattgtgttttctttttct 17446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 20625718 - 20625667
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  20625718 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 20625667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 23407398 - 23407347
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  23407398 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 23407347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 30069209 - 30069260
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  30069209 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 30069260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 35932949 - 35932898
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||  ||||||||    
T  35932949 tgaaggtgagaaaaacacaagaaggggaggttgaattgtgttagctttttct 35932898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 90377 - 90326
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |||| |||||||||||||  ||||||||    
T  90377 tttgaaggtgagaaaaacacaaga--atgaggttgaattgtgttagctttttct 90326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 19761125 - 19761187
Alignment:
Q  459 gaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaa 521  Q
    |||||||||||| || ||||| ||||| ||| |||||| ||||||||||||| | ||||||||    
T  19761125 gaggttagtccattccccttgcactttcaagtgatttttcactataatcacataagattacaa 19761187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 37395359 - 37395412
Alignment:
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  37395359 ctttgaaggtgagaaaaacacaagaag-gggggttgaattgtgtttactttttct 37395412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 40033724 - 40033667
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  40033724 ttgaaggtgagaaaaacacaagaag-gggggttgaattgtgttttctttttctaaaaaa 40033667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 11208958 - 11208905
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaa-gatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||| |  || |||||||||||||| ||||||||    
T  11208958 ttgaaggtgagaaaaacacaagaagggggaggttgaattgtgttttctttttct 11208905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 15439491 - 15439544
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||   |  |||||||||||||| ||||||||    
T  15439491 tttgaaggtgagaaaaacacaagaaatgggggttgaattgtgttttctttttct 15439544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 20168989 - 20168940
Alignment:
Q  312 aaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  20168989 aaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 20168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 35216458 - 35216405
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||| ||||||||||||||||  |  |||||||||||||| |||||||||    
T  35216458 ttgaaggttagaaaaacacaagaagggggggttgaattgtgttttctttttctg 35216405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 37739873 - 37739926
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||| |||||    
T  37739873 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttcttcttctg 37739926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 42395938 - 42395885
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||| |||||||||||||||  |  |||||||||||||| ||||||||    
T  42395938 tttgaaggtgtgaaaaacacaagaagggggggttgaattgtgttttctttttct 42395885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 561
Target Start/End: Complemental strand, 11693701 - 11693599
Alignment:
Q  458 cgaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctc 557  Q
    ||||||||||||| || ||||| ||||| ||||||||||| |||||||||||| | |||||||||||| || ||||||||| |||| ||||||||| |||    
T  11693701 cgaggttagtccaatc-ccttgcactttcaagggattttcgactataatcacacaagattacaattacttagacacacaagtctaatatttccttgtctc 11693603  T
Q  558 acac 561  Q
    ||||    
T  11693602 acac 11693599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 31270613 - 31270731
Alignment:
Q  444 gttcaccctaaaatc-gaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagccta 542  Q
    |||||||||| |||| |||||||||| |||  ||||| |||| |||| ||||||| |||||||||||| | |||||||||||| || ||||||| | |||    
T  31270613 gttcaccctacaatctgaggttagtctagttcccttgcacttctaagagattttctactataatcacacaagattacaattacttagacacacatgtcta 31270712  T
Q  543 aaatttccttgcctcacac 561  Q
    | |||||||||||||||||    
T  31270713 atatttccttgcctcacac 31270731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 552
Target Start/End: Original strand, 24676972 - 24677083
Alignment:
Q  442 tagttcacccta-aaatcgaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcc 540  Q
    |||||||||| | ||| ||||| |||||||||| ||||  |||| |||| |||||| || |||||||||| | |||||||||||| | |||||||||| |    
T  24676972 tagttcaccccacaaaccgaggctagtccagtctccttacacttctaagagatttttcagtataatcacacaagattacaattactttaacacacaagtc 24677071  T
Q  541 taaaatttcctt 552  Q
    ||| ||||||||    
T  24677072 taagatttcctt 24677083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 11004566 - 11004619
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  11004566 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 11004619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 852 - 901
Target Start/End: Complemental strand, 23135457 - 23135408
Alignment:
Q  852 tttgagaaactttgattaggtttgaaatatttttcctctaatggataatt 901  Q
    |||||||||||||| | | |||||||||||||| ||||||||||||||||    
T  23135457 tttgagaaactttgttcaagtttgaaatattttgcctctaatggataatt 23135408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 38404126 - 38404073
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  38404126 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 38404073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 9169572 - 9169624
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  9169572 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 9169624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 13027915 - 13027864
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  || |||||||||||||| ||||||||    
T  13027915 ttgaaggtgagaaaaacacaagaag-ggaggttgaattgtgtttgctttttct 13027864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 14186879 - 14186931
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  14186879 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgtttactttttct 14186931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 26210461 - 26210409
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  26210461 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 26210409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 30025127 - 30025179
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  30025127 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgtttgctttttct 30025179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 1292247 - 1292298
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||  ||||||||    
T  1292247 tgaaggtgagaaaaacacaagaaggggaggttgaattgtgttagctttttct 1292298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 11088005 - 11087954
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  |||||||| ||||| ||||||||    
T  11088005 tgaaggtgagaaaaacacaagaagagggggttgaattttgttttctttttct 11087954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 13138889 - 13138838
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  |||||||||||||  ||||||||    
T  13138889 tgaaggtgagaaaaacacaagaagagggggttgaattgtgttggctttttct 13138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 13258626 - 13258721
Alignment:
Q  466 gtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcacac 561  Q
    ||||| || ||||| |||| |||||||||||||||||||||| || |  |||| |||||  || |||||||||  ||| ||||| |||||||||||    
T  13258626 gtccactctccttgcacttctaagggattttccactataatcccataaaattataattatttagacacacaagtttaagatttcattgcctcacac 13258721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 13265966 - 13266061
Alignment:
Q  466 gtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcacac 561  Q
    ||||| || ||||| |||| |||||||||||||||||||||| || |  |||| |||||  || |||||||||  ||| ||||| |||||||||||    
T  13265966 gtccactctccttgcacttctaagggattttccactataatcccataaaattataattatttagacacacaagtttaagatttcattgcctcacac 13266061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 40055664 - 40055613
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  40055664 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 40055613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 733 - 801
Target Start/End: Original strand, 13258842 - 13258911
Alignment:
Q  733 agttttggcactttt-aaattatgtgaagtctcttatgttcgtcaaactactcaggt-cttaaatatgaga 801  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||| | ||||| || |||||||||||||    
T  13258842 agttttggcacttgtgaaattatgtgaagtctcttatgttcttcaatc-actcatgtccttaaatatgaga 13258911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 733 - 801
Target Start/End: Original strand, 13266182 - 13266251
Alignment:
Q  733 agttttggcactttt-aaattatgtgaagtctcttatgttcgtcaaactactcaggt-cttaaatatgaga 801  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||| | ||||| || |||||||||||||    
T  13266182 agttttggcacttgtgaaattatgtgaagtctcttatgttcttcaatc-actcatgtccttaaatatgaga 13266251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 21770858 - 21770804
Alignment:
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||| ||||||||||||||||  |  |||||||||||||| ||||||||    
T  21770858 ctttgaaggtaagaaaaacacaagaagggggggttgaattgtgttttctttttct 21770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 24450626 - 24450676
Alignment:
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttccttt 357  Q
    |||||||||||||||||||||||||||  |  |||||||||||||| ||||    
T  24450626 ctttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttcttt 24450676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 21621274 - 21621233
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgt 350  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  21621274 ttgaaggtgagaaaaacacaagaagatggtgttggattgtgt 21621233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 32265673 - 32265632
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtt 351  Q
    ||||||||||||||||||||||||  | ||||||||||||||    
T  32265673 tgaaggtgagaaaaacacaagaagggggagttgaattgtgtt 32265632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 4890286 - 4890442
Alignment:
Q  51 attgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaatcctatttatcgacattagaacctt-gtgatgagatta-ttttt 148  Q
    ||||||||||||||| | ||| |||   |||||||||| ||||||||| || || ||||||||| | |||||| | ||||| |||||||||||| |||||    
T  4890286 attgtagcaagctttaagacactttggaacatcattttagatattcaagaagaacatcctatttcttgacattggtaccttggtgatgagattatttttt 4890385  T
Q  149 ctcatatttgatggagatacttaaatctttcaacttaatattatatcctttttctaa 205  Q
     |||| ||||||||||| ||||||||||||||  | ||||| ||| || ||||||||    
T  4890386 ttcatctttgatggagagacttaaatctttcatgtaaatatcataacccttttctaa 4890442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 24716533 - 24716430
Alignment:
Q  457 tcgaggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcct 556  Q
    |||| ||||||  |||| ||||| ||||| ||| |||||| ||||| ||||||| |  ||||||||||| || ||||||||| |||||||||||||||||    
T  24716533 tcgatgttagtttagtccccttgaactttcaagagatttttcactaaaatcacacatcattacaattacttagacacacaagtctaaaatttccttgcct 24716434  T
Q  557 caca 560  Q
    ||||    
T  24716433 caca 24716430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 692 - 785
Target Start/End: Complemental strand, 35150825 - 35150731
Alignment:
Q  692 taagaattttctaagtctttgtgcactttatattttgacagagttttggcactt-ttaaattatgtgaagtctcttatgttcgtcaaactactca 785  Q
    |||||||||| ||||| |||||||||||| || ||| | ||||||||||||||| | ||| ||| ||||||||||||| ||||||||||| ||||    
T  35150825 taagaattttttaagtttttgtgcactttctaatttaatagagttttggcacttgtaaaaatatatgaagtctcttatattcgtcaaactgctca 35150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 668 - 785
Target Start/End: Original strand, 6115864 - 6115981
Alignment:
Q  668 agaaattccaagatatagagtttctaagaattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctctta 767  Q
    |||||||| ||||| || ||||  |||||||||||||||| ||||||| ||||  | ||||||||||||||| | ||| |||| |||||  ||| | | |    
T  6115864 agaaattctaagatctaaagttggtaagaattttctaagtgtttgtgcgcttttgaatttgacagagttttgacgcttgtaaaatatgtatagtttataa 6115963  T
Q  768 tgttcgtcaaactactca 785  Q
     |||| ||||||||||||    
T  6115964 agttcttcaaactactca 6115981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 23508564 - 23508621
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  23508564 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaa 23508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 11535267 - 11535319
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  11535267 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 11535319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 12605844 - 12605896
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttc 360  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||  |||||||    
T  12605844 tttgaaggtgagaaaaacacaagaagttgaggttgaattatgttggctttttc 12605896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 14190324 - 14190272
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  14190324 ttgaaggtgagaaaaacacaagaagggggtgttgaattgtgttttctttttct 14190272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 10290048 - 10290099
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  10290048 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 10290099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 10299957 - 10300008
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  10299957 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 10300008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 767
Target Start/End: Original strand, 17743354 - 17743429
Alignment:
Q  692 taagaattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctctta 767  Q
    |||||||||||||||| ||||||| ||||  | ||||| ||||||||| ||||| |||| | |||| |||||||||    
T  17743354 taagaattttctaagtgtttgtgcgcttttgaatttgatagagttttgacacttgtaaaatttgtgtagtctctta 17743429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 20976646 - 20976697
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  20976646 tgaaggtgagaaaaacacaagaagggggggttgaattgtgtttgctttttct 20976697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 47152886 - 47152835
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  47152886 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 47152835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 55650746 - 55650797
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  55650746 tgaaggtgagaaaaacacaagaaggaggggttgaattgtgttttctttttct 55650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 14779325 - 14779271
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaa-gatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  | ||||||||||||||| ||||||||    
T  14779325 tttgaaggtgagaaaaacacaagaaggggggagttgaattgtgttttctttttct 14779271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 3370131 - 3370184
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||| |||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  3370131 tttgtaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 3370184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 8501693 - 8501737
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaaga--tgaagttgaattgtgtt 351  Q
    ||||||||||||||||||||||||||   ||||||||||||||||    
T  8501693 ttgaaggtgagaaaaacacaagaagaggagaagttgaattgtgtt 8501737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 11514457 - 11514509
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  11514457 tttgaaggtgagaaaaacacaagaag-gggggttgaattgtgttttctttttct 11514509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 16631631 - 16631672
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtt 351  Q
    ||||||||||||||||||||||||| |  |||||||||||||    
T  16631631 tgaaggtgagaaaaacacaagaagagggggttgaattgtgtt 16631672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 19570438 - 19570490
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  19570438 tttgaaggtgagaaaaacacaagaag-gggggttgaattgtgttttctttttct 19570490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 24628816 - 24628763
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||| ||||||||  | ||||||||||||||  ||||||||    
T  24628816 tttgaaggtgagaaaaatacaagaaggaggagttgaattgtgttagctttttct 24628763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 24639666 - 24639719
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||| ||||    
T  24639666 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttctctg 24639719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 692 - 777
Target Start/End: Complemental strand, 2120829 - 2120746
Alignment:
Q  692 taagaattttctaagtctttgtgcactttatattttgacagagttttggcacttttaaattatgtgaagtctcttatgttcgtcaa 777  Q
    ||||||||||||  || ||||||||||||  | ||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||    
T  2120829 taagaattttct--gtgtttgtgcacttttgaatttgacagagttttgacacttgtaaattatgtgaagtctcttaggttcttcaa 2120746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 15674056 - 15674132
Alignment:
Q  48 atcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaatcctatttatcgacatta 124  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||||| || || ||| ||||| | |||||||    
T  15674056 atcattgtagcaagctttgagacacttttcaacatcattttggatattcaagaagaacatcatatttcttgacatta 15674132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 6491178 - 6491111
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaatctctttct 376  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||| ||| |||||    
T  6491178 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctaaaaattctttttct 6491111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 25021906 - 25022017
Alignment:
Q  70 catttttccacatcattttggatattcaacaacaaaatcctatttatcgacattagaaccttg-tgatgagattatttttctcatatttgatggagatac 168  Q
    |||||| | |||||||||| |||| ||||||| ||  ||| |||| ||||||||   |||||| |||||||| || ||||  ||| ||||||||||||||    
T  25021906 cattttccaacatcatttttgatactcaacaagaacgtcccatttctcgacattgctaccttggtgatgagactactttttccatctttgatggagatac 25022005  T
Q  169 ttaaatctttca 180  Q
    ||||||||||||    
T  25022006 ttaaatctttca 25022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 12967509 - 12967562
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  | ||||||||||||||  ||||||||    
T  12967509 tttgaaggtgagaaaaacacaagaagggggagttgaattgtgttagctttttct 12967562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 14322523 - 14322470
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  14322523 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 14322470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 28315070 - 28315017
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  28315070 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 28315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 38204657 - 38204710
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  38204657 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 38204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 39382089 - 39382142
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  39382089 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 39382142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 6501831 - 6501775
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaa 366  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| ||||    
T  6501831 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctaaaaa 6501775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 8774056 - 8774108
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  8774056 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 8774108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 8996788 - 8996736
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  8996788 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 8996736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 9982718 - 9982666
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  9982718 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 9982666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 12238447 - 12238395
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  12238447 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 12238395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 15848299 - 15848350
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||| |||  |||||||||||||| ||||||||    
T  15848299 ttgaaggtgagaaaaacacaagaa-atggtgttgaattgtgttttctttttct 15848350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 21640034 - 21640086
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  21640034 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgtttactttttct 21640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 29462049 - 29461997
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||| |||||||||||||||| |  |||||||||||||| ||||||||    
T  29462049 ttgaaggtgtgaaaaacacaagaagagggggttgaattgtgttttctttttct 29461997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 29934394 - 29934342
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  29934394 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 29934342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 29983548 - 29983496
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  29983548 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 29983496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 38194123 - 38194175
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  38194123 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 38194175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 933027 - 933078
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  933027 tgaaggtgagaaaaacacaagaaggggtggttgaattgtgttttctttttct 933078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 9007339 - 9007288
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  9007339 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 9007288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 13953456 - 13953507
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  13953456 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 13953507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 15832565 - 15832616
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  15832565 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 15832616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 23635110 - 23635161
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  23635110 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 23635161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 27882787 - 27882838
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  27882787 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 27882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 29854607 - 29854658
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||  ||||||||    
T  29854607 tgaaggtgagaaaaacacaagaaggggaggttgaattgtgttagctttttct 29854658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 38314097 - 38314148
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  38314097 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 38314148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 51990023 - 51989972
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  51990023 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 51989972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 16031701 - 16031750
Alignment:
Q  311 gaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||| || ||||||||||| || ||||||||    
T  16031701 gaaggtgagaaaaacacaagaaga-gaggttgaattgtgatttctttttct 16031750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 460 - 562
Target Start/End: Original strand, 55212524 - 55212625
Alignment:
Q  460 aggttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattacaattacgtaaacacacaagcctaaaatttccttgcctcac 559  Q
    ||||||||  |||| ||||| ||| | ||| ||||||||||||||||||||   |||||||||||| | ||||||||||  ||| |||| |||| |||||    
T  55212524 aggttagtttagtccccttgcactatcaagtgattttccactataatcacacgagattacaattac-ttaacacacaagtttaagattttcttgtctcac 55212622  T
Q  560 aca 562  Q
    |||    
T  55212623 aca 55212625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 14580541 - 14580590
Alignment:
Q  312 aaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  14580541 aaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 14580590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 15686563 - 15686608
Alignment:
Q  132 gtgatgagattatttttctcatatttgatggagatacttaaatctt 177  Q
    ||||||||||||||||| | || ||||||||||| |||||||||||    
T  15686563 gtgatgagattattttttttatctttgatggagagacttaaatctt 15686608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 778
Target Start/End: Original strand, 27592672 - 27592717
Alignment:
Q  733 agttttggcacttttaaattatgtgaagtctcttatgttcgtcaaa 778  Q
    ||||||||||| |||||| | ||||||||||||||||||| |||||    
T  27592672 agttttggcacatttaaaatttgtgaagtctcttatgttcttcaaa 27592717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 103587 - 103640
Alignment:
Q  48 atcattgtagcaagctttgatacatttttccacatcattttggatattcaacaa 101  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  103587 atcattgtagcaagatttaagacatttttccacatcattttggatattcaacaa 103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 12766610 - 12766471
Alignment:
Q  39 ccatgatggatcattgtagcaagctttgatacatttttccacatcattttggatattcaacaacaaaatcctatttatcgacattagaaccttgtga-tg 137  Q
    |||||||| |||||| ||| || | |||| |||| ||||||  || ||||||||||||||||  || | |||||||||||||||||   |||||  | ||    
T  12766610 ccatgatgcatcattatagaaatcattgagacatatttccatgtcgttttggatattcaacagtaacaccctatttatcgacatta---ccttggcaatg 12766514  T
Q  138 agattatttttctcatatttgatggagatacttaaatctttca 180  Q
    ||||||||| |  ||||||||||| ||||||||||||||||||    
T  12766513 agattatttcttccatatttgatgaagatacttaaatctttca 12766471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 22773733 - 22773791
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    |||||||||||||||||||||||||| |  |||||||||||||| |||||||| |||||    
T  22773733 ttgaaggtgagaaaaacacaagaagagggggttgaattgtgttttctttttctcaaaaa 22773791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 20319562 - 20319511
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  20319562 tgaaggtgagaaaaacacaagaagagggggttgaattgtgttttctttttct 20319511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 27979233 - 27979180
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  27979233 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 27979180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 28065762 - 28065709
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  28065762 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 28065709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 35262964 - 35263017
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  35262964 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 35263017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 35273589 - 35273642
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  35273589 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 35273642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 18769756 - 18769704
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  18769756 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 18769704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 19303279 - 19303227
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  19303279 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 19303227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 24815428 - 24815376
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  24815428 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 24815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 27220755 - 27220807
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  27220755 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 27220807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 28722169 - 28722117
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  28722169 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 28722117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 35252356 - 35252408
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  35252356 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 35252408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 19498820 - 19498769
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  19498820 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 19498769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 22763029 - 22763080
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  22763029 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 22763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 24274404 - 24274455
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  24274404 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 24274455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 361
Target Start/End: Original strand, 24778521 - 24778576
Alignment:
Q  306 tctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||||  |  |||||||||||||  ||||||||    
T  24778521 tctttgaaggtgagaaaaacacaagaagggggggttgaattgtgttggctttttct 24778576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 26866450 - 26866501
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  26866450 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 26866501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 38586938 - 38586887
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  38586938 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 38586887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 16195817 - 16195759
Alignment:
Q  462 gttagtccagtcaccttgtacttttaagggattttccactataatcacaaaggattaca 520  Q
    |||||||||| | | |||||||| ||||||||||| ||||||||||||| | |||||||    
T  16195817 gttagtccagaccctttgtacttctaagggatttttcactataatcacacaagattaca 16195759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 19313845 - 19313792
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatga-agttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||| |||  |||||||||||||| ||||||||    
T  19313845 tttgaaggtgagaaaaacacaagaag-tgagggttgaattgtgttttctttttct 19313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 510
Target Start/End: Complemental strand, 26275681 - 26275628
Alignment:
Q  457 tcgaggttagtccagtcaccttgtacttttaagggattttccactataatcaca 510  Q
    |||||||||||||||||  |||| |||| |||| |||||| |||||||||||||    
T  26275681 tcgaggttagtccagtctacttgcacttctaagagatttttcactataatcaca 26275628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 26654295 - 26654243
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||| || ||||||||| ||||  |||||||||    
T  26654295 ttgaaggtgagaaaaacacaagaag-tggagttgaattatgttggctttttctg 26654243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 10139 - 10191
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  10139 ttgaaggtgagaaaaacacaagaagagggggttgaattgtgttttctttttct 10191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 57657 - 57605
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  57657 ttgaaggtgagaaaaacacaagaagagggggttgaattgtgttttctttttct 57605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 363 - 312
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||| ||||||||    
T  363 tgaaggtgagaaaaacacaagaaggggaggttgaattgtgttttctttttct 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000009; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 18554649 - 18554708
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaat 368  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||| ||||||    
T  18554649 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaat 18554708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 27372180 - 27372234
Alignment:
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  27372180 ctttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 27372234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 27462530 - 27462584
Alignment:
Q  307 ctttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  27462530 ctttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 27462584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 12827046 - 12827099
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  12827046 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 12827099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 18926608 - 18926555
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  18926608 tttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 18926555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 11021312 - 11021364
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctg 362  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  11021312 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctg 11021364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 11148034 - 11147982
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  11148034 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 11147982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 11205324 - 11205376
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  | |||||||||||||||  |||||||    
T  11205324 ttgaaggtgagaaaaacacaagaagggggagttgaattgtgttttttttttct 11205376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 17063581 - 17063633
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17063581 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17063633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 17609298 - 17609246
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17609298 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17609246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 21127390 - 21127442
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  21127390 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 21127442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 27505292 - 27505344
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  27505292 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 27505344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 28357555 - 28357503
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  28357555 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 28357503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 31930801 - 31930852
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  || |||||||||||||| ||||||||    
T  31930801 ttgaaggtgagaaaaacacaagaag-ggaggttgaattgtgttttctttttct 31930852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 9717020 - 9717071
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  || |||||||||||||| | ||||||    
T  9717020 tgaaggtgagaaaaacacaagaaggggaggttgaattgtgtttgcattttct 9717071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 15532585 - 15532534
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  |||||||||||||  ||||||||    
T  15532585 tgaaggtgagaaaaacacaagaagaaggggttgaattgtgttagctttttct 15532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 17573267 - 17573216
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17573267 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17573216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 17742547 - 17742496
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17742547 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17742496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 21118967 - 21119018
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  21118967 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 21119018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 25583264 - 25583315
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  25583264 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 25583315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 25687594 - 25687543
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  25687594 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 25687543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 31571769 - 31571820
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  31571769 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 31571820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 11234847 - 11234889
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgttt 352  Q
    ||||||||||||||||||||||||  | |||||||||||||||    
T  11234847 tgaaggtgagaaaaacacaagaagggggagttgaattgtgttt 11234889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 19687927 - 19687969
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtt 351  Q
    |||||||||||||||||||||||||| |  |||||||||||||    
T  19687927 ttgaaggtgagaaaaacacaagaagagggggttgaattgtgtt 19687969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 12352930 - 12352982
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  12352930 tttgaaggtgagaaaaacacaagaag-gggggttgaattgtgttttctttttct 12352982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 15395616 - 15395563
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||| |||||||||||||| |  |||||||||||||  ||||||||    
T  15395616 tttgaaggtgagcaaaacacaagaagagggggttgaattgtgttagctttttct 15395563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 19453510 - 19453454
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  19453510 tgaaggtgagaaaaacacaagaag-gggggttgaattgtgttttctttttctaaaaaa 19453454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 27720720 - 27720773
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaaga-tgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  27720720 ttgaaggtgagaaaaacacaagaagaggggggttgaattgtgttttctttttct 27720773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 1933 - 1875
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  1933 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaa 1875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 41264 - 41206
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    |||||||||||||||||||||||||  |  |||||||||||||| |||||||| |||||    
T  41264 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttctcaaaaa 41206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 2164 - 2112
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  2164 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 2112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 52 - 104
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  52 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 4435 - 4487
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  4435 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 8639 - 8587
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  8639 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 8587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 4680 - 4732
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  4680 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 4732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 7402 - 7350
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  7402 ttgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 7350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 2166 - 2216
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||||||    
T  2166 tgaaggtgagaaaaacacaagaag-tggggttgaattgtgttttctttttct 2216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 5271 - 5322
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  5271 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 5322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 5596 - 5647
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  5596 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 2073 - 2124
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  2073 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 12218 - 12269
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  12218 tgaaggtgagaaaaacacaagaagtgggggttgaattgtgttttctttttct 12269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 17715 - 17766
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  17715 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 17766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 39887 - 39938
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  39887 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 39938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 43396 - 43345
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  43396 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 43345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 37607 - 37556
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  37607 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 37556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 34810 - 34861
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||||    
T  34810 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttct 34861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 28853 - 28911
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttctgaaaaa 367  Q
    |||||||||||||||| ||||||||  |  |||||||||||||| |||||||| |||||    
T  28853 ttgaaggtgagaaaaatacaagaagggggggttgaattgtgttttctttttctcaaaaa 28911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 39040 - 38990
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttc 360  Q
    ||||||||||||||||||||||||  |  |||||||||||||| |||||||    
T  39040 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttctttttc 38990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 60405 - 60459
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaa-gatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||||||||||||||||||| |  | ||||||||||||||| ||||||||    
T  60405 tttgaaggtgagaaaaacacaagaaggggggagttgaattgtgttttctttttct 60459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 8943 - 8890
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    ||||||||| ||||||||||||||||  |  |||||||||||||| ||||||||    
T  8943 tttgaaggtaagaaaaacacaagaagggggggttgaattgtgttttctttttct 8890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 4887 - 4928
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtt 351  Q
    ||||||||||||||||||||||||  | ||||||||||||||    
T  4887 tgaaggtgagaaaaacacaagaagggggagttgaattgtgtt 4928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 145364 - 145311
Alignment:
Q  309 ttgaaggtgagaaaaacacaagaa-gatgaagttgaattgtgtttcctttttct 361  Q
    |||||||||||||||||||||||| ||||  |||||||||||||  ||||||||    
T  145364 ttgaaggtgagaaaaacacaagaaggatggggttgaattgtgttggctttttct 145311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 250845 - 250885
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtt 351  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  250845 tgaaggtgagaaaaacacaagaaga-gaggttgaattgtgtt 250885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 60888 - 60937
Alignment:
Q  310 tgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttccttttt 359  Q
    ||||||||||||||||||||||||  |  |||||||||||||| ||||||    
T  60888 tgaaggtgagaaaaacacaagaagggggggttgaattgtgttttcttttt 60937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 378468 - 378415
Alignment:
Q  308 tttgaaggtgagaaaaacacaagaagatgaagttgaattgtgtttcctttttct 361  Q
    |||||| |||||||||||||||||||| |  |||||||||||||  ||||||||    
T  378468 tttgaaagtgagaaaaacacaagaagaaggggttgaattgtgttagctttttct 378415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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