View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1859C-Insertion-10 (Length: 404)
Name: NF1859C-Insertion-10
Description: NF1859C
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1859C-Insertion-10 |
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[»] scaffold0003 (1 HSPs) |
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[»] scaffold0178 (2 HSPs) |
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[»] scaffold0122 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 48867403 - 48867273
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatttttaaatgaagattgttggatcatggagaggt |
106 |
Q |
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|
|||||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||| ||| |
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|
T |
48867403 |
gaaccaactttgtaggtggtctaccatagactttattaaaatttgtaattttaaccattttatctatt---aaatgaagattgttgaatcatggaggggt |
48867307 |
T |
|
Q |
107 |
ctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
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|
||||||||||||||||||||||||||||| |||| |
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|
T |
48867306 |
ctattgtagcttataataaaccacaaccacctaa |
48867273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 26798879 - 26798744
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatc--tatttttaaatgaagattgttggatcatggagag |
104 |
Q |
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|||||||||||||| |||||| | ||| |||||||||||| | ||||||||||||||||||| | |||||||||||| |||||| |||||||||| |
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|
T |
26798879 |
gaaccaactttgtaggtggtccaccatacactttattaaaaaatttaattttaactgtttgatcgttttttttaaatgaaaattgtttgatcatggagga |
26798780 |
T |
|
Q |
105 |
gtctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
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|
||||||||||||||| | ||||||||||| |||| |
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|
T |
26798779 |
atctattgtagcttatggtgaaccacaaccacctaa |
26798744 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 49333173 - 49333250
Alignment:
Q |
55 |
ttttaactgtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
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|
||||||| ||||||| | |||||||||| |||| ||||||||||| || ||||||||||||||||||| || ||||| |
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|
T |
49333173 |
ttttaaccgtttgatttttttttaaatgtagatcgttggatcatgaaggagtctattgtagcttataatgaagcacaa |
49333250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 35174318 - 35174230
Alignment:
Q |
45 |
aaatttgtaattttaactgtttgatctat-ttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||| || ||||||| ||||||||| | ||||||||| ||| ||||||||||||| | |||||||||| |||||||||||||||| |
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|
T |
35174318 |
aaatttttatttttaacggtttgatctttgttttaaatggagacccttggatcatggagggatctattgtagtttataataaaccacaa |
35174230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 51400406 - 51400485
Alignment:
Q |
55 |
ttttaactgtttgatctat-ttttaaatgaagattgttggatcatggagagg-tctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||||||||||||| | ||||||||| ||| |||||||||||||| || ||||||||| |||| |||||||||||| |
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|
T |
51400406 |
ttttaactgtttgatctttgttttaaatggagaccgttggatcatggagggggtctattgtaacttacaataaaccacaa |
51400485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 48867052 - 48867015
Alignment:
Q |
360 |
aagttgtatatccgcaactcatatgagcacaacaacaa |
397 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||| |
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|
T |
48867052 |
aagttgtatatccgcaaccgatatgagcacaacaacaa |
48867015 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 48867197 - 48867160
Alignment:
Q |
215 |
caaaactccagaaaattacaaaatttcataactatttt |
252 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||| |
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|
T |
48867197 |
caaaactccaagaaattacaaaatttcataactatttt |
48867160 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 23560010 - 23560089
Alignment:
Q |
55 |
ttttaactgtttgatctattttt--aaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||| |||||||||| ||||| ||||| ||| ||||||||| | |||| | |||||||||||||||| |||||||| |
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|
T |
23560010 |
ttttaattgtttgatctttttttttaaatggagaccgttggatcaagaagagatatattgtagcttataatgaaccacaa |
23560089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 131972 - 131838
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatt-tttaaatgaagattgttggatcatggagagg |
105 |
Q |
|
|
||||||||||||||||||| || | ||| ||||||||||| ||| |||||||||| ||||||||| || |||||||||||||||||||||||||||||| |
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|
T |
131972 |
gaaccaactttgtaagtggactaccataaactttattaaattttttaattttaaccgtttgatcttttctttaaatgaagattgttggatcatggagaga |
131873 |
T |
|
Q |
106 |
tctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
|||||||||||||||||| ||||||||||| |||| |
|
|
T |
131872 |
tctattgtagcttataatgaaccacaaccacctaa |
131838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 33459516 - 33459382
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctattttt-aaatgaagattgttggatcatggagagg |
105 |
Q |
|
|
|||||||||||||| ||||||| | || ||||||||||||||||||||||||||| ||||||| | ||||| |||| |||||||||||||||| ||||| |
|
|
T |
33459516 |
gaaccaactttgtaggtggtctaccatggactttattaaaatttgtaattttaaccgtttgatattttttttaaattaagattgttggatcatagagaga |
33459417 |
T |
|
Q |
106 |
tctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
|||||| || |||||||||||||||||||| |||| |
|
|
T |
33459416 |
tctattttaacttataataaaccacaaccacctaa |
33459382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 10256290 - 10256392
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctat-ttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||| |||||||| || || ||||||| ||| ||||| | ||||||||| ||| ||||||||||||||| | |||||| ||| ||||||||||||| |
|
|
T |
10256290 |
catagaccttattaaatcttttatttttaacggttcgatctttattttaaatggagactgttggatcatggagggatctattatagtttataataaacca |
10256389 |
T |
|
Q |
130 |
caa |
132 |
Q |
|
|
||| |
|
|
T |
10256390 |
caa |
10256392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 28325217 - 28325284
Alignment:
Q |
10 |
accaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatttt |
76 |
Q |
|
|
|||||||||||| ||||||| | ||||||||||||||||||| ||||| ||| ||||||||| |||| |
|
|
T |
28325217 |
accaactttgtaggtggtctaccatagactttattaaaattttaaatttaaaccgtttgatctttttt |
28325284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 46458638 - 46458558
Alignment:
Q |
55 |
ttttaactgtttgatctattttt---aaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||| ||||||||| ||||| ||||| ||| ||||||||||| |||| ||||||||| |||||||| |||||||| |
|
|
T |
46458638 |
ttttaaccgtttgatctttttttgttaaatgtggatcgttggatcatgaagagatctattgtaccttataatgaaccacaa |
46458558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 38280976 - 38281109
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgcatagactttattaaaatttgtaattttaactgtttgatctatt-tttaaatgaagattgttggatcatggagaggt |
106 |
Q |
|
|
||||||||| |||||||||||| | ||||||||||||| ||| | |||||||| ||||||||| || |||||||||||||||||||||||||||| | | |
|
|
T |
38280976 |
gaaccaactctgtaagtggtctacgtagactttattaattttttttattttaaccgtttgatcttttatttaaatgaagattgttggatcatggagggat |
38281075 |
T |
|
Q |
107 |
ctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
||||||||| ||||||| ||||||||||| |||| |
|
|
T |
38281076 |
ctattgtagattataatgaaccacaaccacctaa |
38281109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 2972935 - 2972853
Alignment:
Q |
52 |
taattttaactgtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaacca |
135 |
Q |
|
|
|||||||||| ||||||| | ||||||| |||||||||||||| ||| ||| |||||||||| ||||||| ||||||||||| |
|
|
T |
2972935 |
taattttaaccgtttgatttttttttaa-tgaagattgttggaccatagaggaatctattgtagtttataatgaaccacaacca |
2972853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 13642506 - 13642407
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctattttt-aaatgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
|||| ||||||||||||||| |||||| ||| ||||||||| ||||| |||| ||||||| |||||| || | |||||||||||||||||| ||||| |
|
|
T |
13642506 |
cataaactttattaaaatttttaattt-aaccgtttgatcttttttttaaataaagattg---gatcattaagggatctattgtagcttataatgaacca |
13642411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 40811419 - 40811512
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttt-taaatgaagattgttggatcatggagaggtctattgtagcttataat |
123 |
Q |
|
|
||||||| |||||||| || || ||||||| ||||||| | |||| |||||||||| ||||||||| |||||| ||||||||| |||||||| |
|
|
T |
40811419 |
catagaccttattaaatcttttatttttaaccgtttgatattttttttaaatgaagaccgttggatcaaggagagatctattgtaacttataat |
40811512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 13930565 - 13930522
Alignment:
Q |
89 |
gttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||||||||||| |||||||||||||||||| | |||||||| |
|
|
T |
13930565 |
gttggatcatggaggggtctattgtagcttatattgaaccacaa |
13930522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 14071094 - 14071051
Alignment:
Q |
89 |
gttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||||||||||| |||||||||||||||||| | |||||||| |
|
|
T |
14071094 |
gttggatcatggaggggtctattgtagcttatattgaaccacaa |
14071051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 7e-28; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 11114953 - 11114836
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatttt--taaatgaagattgttggatcatggagag |
104 |
Q |
|
|
|||||||||||||| ||||||| | ||||||||||||||| || |||||||||||||| ||||| |||| |||||||||||||||||||||||||| | |
|
|
T |
11114953 |
gaaccaactttgtaggtggtctaccatagactttattaaatgttttaattttaactgttagatctttttttctaaatgaagattgttggatcatggag-g |
11114855 |
T |
|
Q |
105 |
gtctattgtagcttataat |
123 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
11114854 |
gtctattgtagcttataat |
11114836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 40144707 - 40144811
Alignment:
Q |
35 |
gactttattaaaatttgtaattttaactgtttga----tctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccac |
130 |
Q |
|
|
||||||||||||||||||||||||||| |||||| | | ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
T |
40144707 |
gactttattaaaatttgtaattttaaccgtttgatttttttctttttaaatgaagattgttggattatagagagatctattgtagcttataataaaccac |
40144806 |
T |
|
Q |
131 |
aacca |
135 |
Q |
|
|
||||| |
|
|
T |
40144807 |
aacca |
40144811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 48207668 - 48207558
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttttaaa-tgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
|||||| ||||||||| ||| |||||||||| ||||||||| |||| ||| ||||||||||||||||| |||| | |||||||||||||||||| ||| | |
|
|
T |
48207668 |
catagattttattaaattttttaattttaaccgtttgatcttttttaaaaatgaagattgttggatcacggagggatctattgtagcttataatgaacaa |
48207569 |
T |
|
Q |
130 |
caaccatctaa |
140 |
Q |
|
|
|||||| |||| |
|
|
T |
48207568 |
caaccacctaa |
48207558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 17319209 - 17319313
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctattttt---aaatgaagattgttggatcatggagaggtctattgtagcttataataaac |
127 |
Q |
|
|
|||| ||||||||||| ||| |||||||||| ||| ||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||| |
|
|
T |
17319209 |
cataaactttattaaattttttaattttaaccgttggatctttttttttaaaatgaagattgttggatcatggaggggtctattctagcttataatgaac |
17319308 |
T |
|
Q |
128 |
cacaa |
132 |
Q |
|
|
|||| |
|
|
T |
17319309 |
tacaa |
17319313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 6140309 - 6140207
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctattttt-aaatgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||| |||||||| || || ||||||| ||||||||| ||||| ||||| ||| |||||||||||||| | |||||||||||||||||||||||| |
|
|
T |
6140309 |
catagaccttattaaatcttttatttttaacagtttgatcttttttttaaatggagaccgttggatcatggagggatctattgtagcttataataaacca |
6140210 |
T |
|
Q |
130 |
caa |
132 |
Q |
|
|
||| |
|
|
T |
6140209 |
caa |
6140207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 50530670 - 50530772
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctat-ttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||| |||||||| ||| || ||||||| ||| ||||| | ||||||||| ||| ||||||||||||||| | |||||||||| ||||||||||||| |
|
|
T |
50530670 |
catagaccttattaaattttttatttttaacggttcgatctttattttaaatggagactgttggatcatggagggatctattgtagtttataataaacca |
50530769 |
T |
|
Q |
130 |
caa |
132 |
Q |
|
|
||| |
|
|
T |
50530770 |
caa |
50530772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 52660139 - 52660061
Alignment:
Q |
55 |
ttttaactgtttgatctat-ttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||||||||||||| | ||||||||| ||| ||||||||||||||| |||||||| ||||| |||||||||||| |
|
|
T |
52660139 |
ttttaactgtttgatctttgttttaaatggagaccgttggatcatggagaaatctattgttgcttacaataaaccacaa |
52660061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 38555249 - 38555180
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatttt |
76 |
Q |
|
|
|||||||||||||| ||||||| | ||||||||||||||| ||| |||||| ||| ||||||||| |||| |
|
|
T |
38555249 |
gaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatctttttt |
38555180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 15787142 - 15787201
Alignment:
Q |
54 |
attttaactgtttgatctatttttaaa-tgaagattgttggatcatggagaggtctattg |
112 |
Q |
|
|
|||||||| |||||||| |||||||| ||||||||||||||||||| |||| ||||||| |
|
|
T |
15787142 |
attttaaccatttgatctttttttaaaatgaagattgttggatcatgtagagatctattg |
15787201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 28102294 - 28102336
Alignment:
Q |
89 |
gttggatcatggagaggtctattgtagcttataataaaccaca |
131 |
Q |
|
|
|||||||||||||||| |||||||||| |||| |||||||||| |
|
|
T |
28102294 |
gttggatcatggagagatctattgtaggttattataaaccaca |
28102336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 31712396 - 31712354
Alignment:
Q |
89 |
gttggatcatggagaggtctattgtagcttataataaaccaca |
131 |
Q |
|
|
|||||||||||||||| |||||||||| |||| |||||||||| |
|
|
T |
31712396 |
gttggatcatggagagatctattgtaggttattataaaccaca |
31712354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 16268684 - 16268818
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatt-tttaaatgaagattgttggatcatggagagg |
105 |
Q |
|
|
|||||||||||||| ||||||| | ||||||||||||||| ||| |||||||| | ||||||| | || ||| |||||||||||||||||||||||| | |
|
|
T |
16268684 |
gaaccaactttgtatgtggtctaccatagactttattaaattttttaattttatccgtttgattttttctttgaatgaagattgttggatcatggaggga |
16268783 |
T |
|
Q |
106 |
tctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
|||||| ||||||||||| ||||||||||| |||| |
|
|
T |
16268784 |
tctattttagcttataatgaaccacaaccacctaa |
16268818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 293565 - 293488
Alignment:
Q |
55 |
ttttaactgtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||| |||||||| |||||||||| |||| |||||||||||||||| |||||||||||||||||| |||||||| |
|
|
T |
293565 |
ttttaaccatttgatctttttttaaatggagatcgttggatcatggagagatctattgtagcttataatgaaccacaa |
293488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 27440143 - 27440020
Alignment:
Q |
13 |
aactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctattttt-aaatgaagattgttggatcatggagagg--tct |
108 |
Q |
|
|
||||||||| ||||||| | ||| ||||||||||| ||| |||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||| || ||| |
|
|
T |
27440143 |
aactttgtaggtggtctaccataaactttattaaattttttaattttaaccgtttgatctttttttaaaatgaaaattgttggatcatagagggggatct |
27440044 |
T |
|
Q |
109 |
attgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||||||||||||||||||| |
|
|
T |
27440043 |
tctgtagcttataataaaccacaa |
27440020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 9927748 - 9927883
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgcatagactttattaaaatttgtaattttaactgttt-gatct-attt-ttaaatgaagattgttggatcatggagag |
104 |
Q |
|
|
|||||||||||||| ||||||| | ||||||||||| | ||| |||||||||| |||| ||| | |||| ||||||||||||||||||||||||||| |
|
|
T |
9927748 |
gaaccaactttgtaggtggtctaccaagactttattacattttttaattttaaccgttttgattttatttcttaaatgaagattgttggatcatggaggt |
9927847 |
T |
|
Q |
105 |
gtctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
||||||||||| |||||| ||| ||||||| |||| |
|
|
T |
9927848 |
atctattgtagcatataatgaactacaaccacctaa |
9927883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 31738590 - 31738633
Alignment:
Q |
89 |
gttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||||||||||||| |||||||||||||||||| |||||||| |
|
|
T |
31738590 |
gttggatcatggagagatctattgtagcttataatgaaccacaa |
31738633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 22298771 - 22298870
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctattttt-aaatgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
|||| ||||||||||||||| |||||| ||| ||||||||| ||||| |||| ||||||| |||||| || | |||||||||||||||||| ||||| |
|
|
T |
22298771 |
cataaactttattaaaatttttaattt-aaccgtttgatcttttttttaaataaagattg---gatcattaagggatctattgtagcttataatgaacca |
22298866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 35799659 - 35799789
Alignment:
Q |
12 |
caactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctattttt--aaatgaagattgttggatcatggagaggtct |
108 |
Q |
|
|
||||||| |||||||||| | ||||||||||||||| || |||||||||| ||||||||| ||||| |||| |||||||||||||||||||| | || |
|
|
T |
35799659 |
caactttataagtggtctaccatagactttattaaatgttataattttaaccgtttgatcttttttttaaaattaagattgttggatcatggagggatc- |
35799757 |
T |
|
Q |
109 |
attgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
||||||| ||||||||||||||||||| |||| |
|
|
T |
35799758 |
attgtagtttataataaaccacaaccacctaa |
35799789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 42249733 - 42249623
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttttaaa-tgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
|||||| ||||||||| ||| |||||||||| ||||||||| |||| ||| ||||||||||||||||| |||| |||||||||||||||||| ||| | |
|
|
T |
42249733 |
catagattttattaaattttttaattttaaccgtttgatcttttttaaaaatgaagattgttggatcacggaggaatctattgtagcttataatgaacaa |
42249634 |
T |
|
Q |
130 |
caaccatctaa |
140 |
Q |
|
|
|||||| |||| |
|
|
T |
42249633 |
caaccacctaa |
42249623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 11575408 - 11575334
Alignment:
Q |
58 |
taactgtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
|||| ||||||||| |||||||||| ||| ||||||||||| || | ||||||||||||||||||||||||||| |
|
|
T |
11575408 |
taaccgtttgatctttttttaaatggagacagttggatcatgaagggatctattgtagcttataataaaccacaa |
11575334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 8537157 - 8537279
Alignment:
Q |
10 |
accaactttgtaagtggt-ctgcatagactttattaaaatttgtaattttaactgtttgatctatttttaaatgaagattgttggatcatggagaggtct |
108 |
Q |
|
|
||||||||| |||||||| | ||||||||||||||||| | |||||||||| |||||||| ||||||||||||||| ||| |||||| || | ||| |
|
|
T |
8537157 |
accaactttttaagtggttcaccatagactttattaaaaaatttaattttaaccatttgatctttttttaaatgaagatcgttagatcataaagggatct |
8537256 |
T |
|
Q |
109 |
attgtagcttataataaaccacaa |
132 |
Q |
|
|
||| | ||||||||| |||||||| |
|
|
T |
8537257 |
att-ttgcttataatgaaccacaa |
8537279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 7037157 - 7037234
Alignment:
Q |
55 |
ttttaactgtttgatctattttt-aaatgaagattgttggatcatggagaggtctattgtagcttataataaaccaca |
131 |
Q |
|
|
||||||| ||||||||| ||||| ||| | ||| |||||||||||||||| |||||||||| |||| |||||||||| |
|
|
T |
7037157 |
ttttaaccgtttgatcttttttttaaaaggagaccgttggatcatggagagatctattgtaggttattataaaccaca |
7037234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 37868965 - 37868886
Alignment:
Q |
55 |
ttttaactgtttgatctatttt--taaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||| ||||||||| |||| |||| | |||||||||||||||| || | |||||||||||||||||| || ||||| |
|
|
T |
37868965 |
ttttaaccgtttgatcttttttgttaaacggagattgttggatcatgaagggatctattgtagcttataatgaatcacaa |
37868886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 38471432 - 38471567
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaa-atttgtaattttaactgtttgatctatttttaaa-tgaagattgttggatcatggagag |
104 |
Q |
|
|
||||||||||| || ||||||| | ||||||||||||| |||| | |||||||| ||||||||| |||||||| |||||||||||||||||| ||| | |
|
|
T |
38471432 |
gaaccaactttataggtggtctaccatagactttattatttattttttattttaaccgtttgatctttttttaaaatgaagattgttggatcatagaggg |
38471531 |
T |
|
Q |
105 |
gtctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
|||||||||||||||||| ||||||||||| |||| |
|
|
T |
38471532 |
atctattgtagcttataatgaaccacaaccacctaa |
38471567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 32734298 - 32734400
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttttaaa-tgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||| |||||||| || || ||||||| ||||||| | |||||||| || ||| |||||||||||||| | |||||||||||||||||||||||| |
|
|
T |
32734298 |
catagaccttattaaatcttttatttttaacagtttgatatttttttaaaatggagaccgttggatcatggagggatctattgtagcttataataaacca |
32734397 |
T |
|
Q |
130 |
caa |
132 |
Q |
|
|
||| |
|
|
T |
32734398 |
caa |
32734400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 12933942 - 12934020
Alignment:
Q |
55 |
ttttaactgtttgatctatttt-taaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||| |||||||| |||| |||||||||| |||||||||||||| | ||||||||| ||||||||||||||||| |
|
|
T |
12933942 |
ttttaacgttttgatcttttttataaatgaagaccgttggatcatggagggatctattgtaacttataataaaccacaa |
12934020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 12948103 - 12948181
Alignment:
Q |
55 |
ttttaactgtttgatctatttt-taaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||| |||||||| |||| |||||||||| |||||||||||||| | ||||||||| ||||||||||||||||| |
|
|
T |
12948103 |
ttttaacgttttgatcttttttataaatgaagaccgttggatcatggagggatctattgtaacttataataaaccacaa |
12948181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 223369 - 223438
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctatttt |
76 |
Q |
|
|
|||||||||||||| ||||||| | ||||||||||||||| ||| |||||| ||| ||||||||| |||| |
|
|
T |
223369 |
gaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatctttttt |
223438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 19525213 - 19525138
Alignment:
Q |
55 |
ttttaactgtttgatctattttt-aaatgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||||||||||||| ||||| ||||| ||| |||||||||||||| | || |||||||||||| || ||||| |
|
|
T |
19525213 |
ttttaactgtttgatcttttttttaaatggagaccgttggatcatggagggatcaattgtagcttatgatgaacca |
19525138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 40058185 - 40058285
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctattttt--aaatgaagattgttggatcatggagaggtctattgtagcttataataaacc |
128 |
Q |
|
|
||||||| |||||||| || || ||||||||||||||||| ||||| ||||| ||| |||||||||| ||| ||||||||||||| |||| |||| |
|
|
T |
40058185 |
catagaccttattaaatcttttatttttaactgtttgatcttttttttaaaatggagaccgttggatcatagaggaatctattgtagcttgtaattaacc |
40058284 |
T |
|
Q |
129 |
a |
129 |
Q |
|
|
| |
|
|
T |
40058285 |
a |
40058285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 47218 - 47341
Alignment:
Q |
13 |
aactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatctattttt-aaatgaagattgttggatcatggagagg--tct |
108 |
Q |
|
|
||||||||| ||||||| | ||| ||||||||||| ||| |||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||| || ||| |
|
|
T |
47218 |
aactttgtaggtggtctaccataaactttattaaattttttaattttaaccgtttgatctttttttaaaatgaaaattgttggatcatagagggggatct |
47317 |
T |
|
Q |
109 |
attgtagcttataataaaccacaa |
132 |
Q |
|
|
|||||||||||||||||||||| |
|
|
T |
47318 |
tctgtagcttataataaaccacaa |
47341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0178 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0178
Description:
Target: scaffold0178; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 1377 - 1486
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttttaaa-tgaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||||||||||| ||| |||||||||| ||||||||| |||||||| ||||||||||| |||| |||| | |||||||||||||||||| ||| | |
|
|
T |
1377 |
catagactttattaattttt-taattttaaccgtttgatctttttttaaaatgaagattgttcaatcacggagggatctattgtagcttataatgaacaa |
1475 |
T |
|
Q |
130 |
caaccatctaa |
140 |
Q |
|
|
|||||| |||| |
|
|
T |
1476 |
caaccacctaa |
1486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 1554 - 1591
Alignment:
Q |
215 |
caaaactccagaaaattacaaaatttcataactatttt |
252 |
Q |
|
|
||||| |||||||||||||||||||||||| ||||||| |
|
|
T |
1554 |
caaaaatccagaaaattacaaaatttcatagctatttt |
1591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 8395138 - 8395272
Alignment:
Q |
8 |
gaaccaactttgtaagtggtctgc-atagactttattaaaatttgtaattttaactgtttgatc-tatttttaaatgaagattgttggatcatggagagg |
105 |
Q |
|
|
|||||||||||||| |||||| | ||| |||||||||||| | |||||||||| |||||||| | |||||||||||| || ||| |||||||||| |
|
|
T |
8395138 |
gaaccaactttgtaggtggtccaccatacactttattaaaaaatttaattttaaccgtttgatcgtttttttaaatgaaaatcgtttgatcatggaggaa |
8395237 |
T |
|
Q |
106 |
tctattgtagcttataataaaccacaaccatctaa |
140 |
Q |
|
|
||||| ||||||||| | ||||||||||| |||| |
|
|
T |
8395238 |
tctatcgtagcttatggtgaaccacaaccacctaa |
8395272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 13366999 - 13366898
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccac |
130 |
Q |
|
|
||||||| |||||||| || || ||||||| ||||||| | ||||||| || ||| |||||||||| | |||| ||||||||||||| |||| |||||| |
|
|
T |
13366999 |
catagaccttattaaaccttttatttttaaccgtttgatatttttttaattggagactgttggatcaagtagagatctattgtagcttgtaatgaaccac |
13366900 |
T |
|
Q |
131 |
aa |
132 |
Q |
|
|
|| |
|
|
T |
13366899 |
aa |
13366898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 35944099 - 35944173
Alignment:
Q |
55 |
ttttaactgtttgatctat-ttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaacc |
128 |
Q |
|
|
||||||||||||||||| | ||||||||| | || ||||||||||| || ||||||||||| |||||||| |||| |
|
|
T |
35944099 |
ttttaactgtttgatctttattttaaatggaaatcgttggatcatgaaggggtctattgtaacttataatgaacc |
35944173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 37324605 - 37324536
Alignment:
Q |
63 |
gtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||||| |||||||||| |||| ||| ||||||||| | ||||||||||||||||| |||||||| |
|
|
T |
37324605 |
gtttgatctttttttaaatggagatcattgaatcatggagggatctattgtagcttataacgaaccacaa |
37324536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 19913683 - 19913760
Alignment:
Q |
55 |
ttttaactgtttgatctatttttaaatgaagattgttggatcatggagaggtctattgtagcttataataaaccacaa |
132 |
Q |
|
|
||||||| |||||| | |||||||||| ||| ||||||||| |||| | ||||| |||||||||||| |||||||| |
|
|
T |
19913683 |
ttttaaccatttgatatttttttaaatggagaccgttggatcaaggagggatctatcgtagcttataatgaaccacaa |
19913760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0122
Description:
Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 16112 - 16214
Alignment:
Q |
31 |
catagactttattaaaatttgtaattttaactgtttgatctatttttaaat-gaagattgttggatcatggagaggtctattgtagcttataataaacca |
129 |
Q |
|
|
||||||| |||||||| || || ||||||| ||||||| | ||||||||| | ||| |||||||||| | |||| ||||||||||||| |||| ||||| |
|
|
T |
16112 |
catagaccttattaaaccttttatttttaaccgtttgatatttttttaaattggagactgttggatcaagtagagatctattgtagcttgtaatgaacca |
16211 |
T |
|
Q |
130 |
caa |
132 |
Q |
|
|
||| |
|
|
T |
16212 |
caa |
16214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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