View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1883-3-Insertion-21 (Length: 37)
Name: NF1883-3-Insertion-21
Description: 454-NF1883-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1883-3-Insertion-21 |
 | |
|
| [»] chr7 (2 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 37; Significance: 0.0000000000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21773151 - 21773187
Alignment:
| Q |
1 |
aaaaggtcaagatgatgacataccggaacatacaaga |
37 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21773151 |
aaaaggtcaagatgatgacataccggaacatacaaga |
21773187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21786679 - 21786715
Alignment:
| Q |
1 |
aaaaggtcaagatgatgacataccggaacatacaaga |
37 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21786679 |
aaaaggtcaagatgatgacataccggaacatacaaga |
21786715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 3426 times since January 2019
Visitors: 5832