View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071-Insertion-11 (Length: 485)
Name: NF2071-Insertion-11
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 471; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 7 - 485
Target Start/End: Original strand, 44837198 - 44837676
Alignment:
| Q |
7 |
ataccttgcaaagaatcttctccaaacatcaattttcacatttctaacagtcctttctctaccttctgacgcaacaatatttcttatccctgcagatagt |
106 |
Q |
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| T |
44837198 |
ataccttgcaaagaatcttctccaaacatcaattttcacatttctaacagtcctttctctaccttctgacgcaacaatatttcttaaccctacagatagt |
44837297 |
T |
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| Q |
107 |
attccttctgttatcattctacactcatcctcctcgctcatacatgtttcagccatatcgaaaaaagccgagtagaagaacaacgcttcaacgaatcggt |
206 |
Q |
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| T |
44837298 |
attccttctgttatcattctacactcatcctcctcgctcatacatgtttcagccatatcgaaaaaagccgagtagaagaacaacgcttcaacgaatcggt |
44837397 |
T |
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| Q |
207 |
tcacaaaagactgcgaattaagacttgcttcagtttcaagtactatcattatacatggtttgatatctctcaaaaccctcatcaaattttccatacaatc |
306 |
Q |
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| T |
44837398 |
tcacaaaagactgcgaattaagacttgcttcagtttcaagtactatcattatacatggtttgatatctctcaaaaccctcatcaaattttccatacaatc |
44837497 |
T |
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| Q |
307 |
ttgctttgatattaaagtccttagaaaatatggagaataaacagcaacagcttcatccttttcaatttcaaaatcatcctctttgatttccaacatatct |
406 |
Q |
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| T |
44837498 |
ttgctttgatattaaagtccttagaaaatatggagaataaacagcaacagcttcatccttttcaatttcaaaatcatcctctttgatttccaacatatct |
44837597 |
T |
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| Q |
407 |
tctactaaaacaggtttatataaaaagggcaagttcaatgattcagcaaaactagctaaatttttgccagtttcttcaa |
485 |
Q |
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| T |
44837598 |
tctactaaaacaggtttatataaaaagggcaagttcaatgattcagcaaaactagctaaatttttgccagtttcttcaa |
44837676 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 38926677 - 38926804
Alignment:
| Q |
7 |
ataccttgcaaagaatcttctccaaacatcaattttcacatttctaacagtcctttctctaccttctgacgcaacaatatttcttatccctgcagatagt |
106 |
Q |
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||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| | |||| | ||||||| |||||||||||| |||||| | |
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| T |
38926677 |
ataccttgcaaagaaccttctccaaacatcaatcttcacattcctaaccttcctttcttcatcttccaaaccaacaatgtttcttatcccttcagataat |
38926776 |
T |
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| Q |
107 |
attccttctgttatcattctacactcat |
134 |
Q |
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||| |||| | || | ||||||||||| |
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| T |
38926777 |
attgcttccatcattactctacactcat |
38926804 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 38927092 - 38927153
Alignment:
| Q |
422 |
ttatataaaaagggcaagttcaatgattcagcaaaactagctaaatttttgccagtttcttc |
483 |
Q |
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|||||||||||||| | |||||| |||||||||||||| |||| |||||||| ||||||| |
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| T |
38927092 |
ttatataaaaagggtatgttcaaggattcagcaaaactcattaaacttttgccaatttcttc |
38927153 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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