View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071-Insertion-18 (Length: 208)
Name: NF2071-Insertion-18
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071-Insertion-18 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 46919636 - 46919436
Alignment:
| Q |
8 |
aatacttgtataggatacttcgtagatgtatatcctaaaaatgatgaaggtaaaaaagtatgagccaatgttgaaagaatctattgaagattaaatgatt |
107 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
46919636 |
aatacttgtataagatacttcgtagatgtatatcctaaaaataatgaaggtaaaaaaatatgagccaatgttgaaagaatctattgaagattaaatgatt |
46919537 |
T |
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| Q |
108 |
caattcaacatgtacattaatagagttgtccattgatcaaccatgcttaaaatataacttttgtggatgatagtaacgacagaaaatggactaaattagt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
46919536 |
caattcaacatgtacattaatagagttgtccattgatcaaccatgcttaaaatataacttttgtcgatgatagtaacgacagaaaatggactaaattagt |
46919437 |
T |
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| Q |
208 |
t |
208 |
Q |
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| T |
46919436 |
t |
46919436 |
T |
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