View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2071-Insertion-2 (Length: 728)
Name: NF2071-Insertion-2
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071-Insertion-2 |
 | |
|
| [»] chr4 (17 HSPs) |
| |
|
| [»] chr1 (7 HSPs) |
| |
|
| [»] chr8 (2 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 559; Significance: 0; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 9 - 728
Target Start/End: Original strand, 33833892 - 33834605
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagtatggccttgtttggaggttacaaaaagca |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||||| || |
|
|
| T |
33833892 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacctggctttattgctcagggggagtacggccttgtttgcaagttacaaaaatca |
33833991 |
T |
|
| Q |
109 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtat |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||| ||||||| ||||| |
|
|
| T |
33833992 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttatt-aacagtttgacatgattcttagtgaaacggatcattatgtat |
33834090 |
T |
|
| Q |
209 |
tctataaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaa |
308 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
33834091 |
tctttaaacgttcatctttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattactggtaatgatcaggaaggcattaaagacctaaa |
33834190 |
T |
|
| Q |
309 |
gcagcatttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttct |
408 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33834191 |
gcagcatttattcagcaacttccaaacaaaagatttaggtcaata-cgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttct |
33834289 |
T |
|
| Q |
409 |
cagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatc |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
33834290 |
cagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttgatactcctatggaccccaatgtgaagcttttacagaatc |
33834389 |
T |
|
| Q |
509 |
aaggagatttgtatcctgaccaaggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgt |
608 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
33834390 |
aaggagatttgtatcctgacccaggcagata----aggttagttgggaagctgaattatcttactatgactagaccagatatttcgtttgctgttagtgt |
33834485 |
T |
|
| Q |
609 |
tgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggtatattaaagggtcgcctggaaaaggacttgtttat |
708 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33834486 |
tgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcggatcttgaggtatattaaagggtcgcctggaaaaggacttgtttat |
33834585 |
T |
|
| Q |
709 |
tcatacagaggacataccaa |
728 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
33834586 |
tccgacagaggacataccaa |
33834605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 541; E-Value: 0
Query Start/End: Original strand, 9 - 717
Target Start/End: Complemental strand, 37917867 - 37917159
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagtatggccttgtttggaggttacaaaaagca |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| | |||||||||| || |
|
|
| T |
37917867 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacctggctttattgctcaaggggggtatggccttgtttgcaagttacaaaaatca |
37917768 |
T |
|
| Q |
109 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtat |
208 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||||||||||| |
|
|
| T |
37917767 |
ttgtatggtctaaaacaatcacctcaagcttggtttggaaaattcagcaaggttattaaacagcttggaatgattcgtagtgaaacggatcattctgtat |
37917668 |
T |
|
| Q |
209 |
tctataaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaa |
308 |
Q |
| |
|
||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
37917667 |
tctttaaacattcatctttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattactggtaatgatcaggaaggcattaaagacctaaa |
37917568 |
T |
|
| Q |
309 |
gcagcatttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttct |
408 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
37917567 |
gcagcatttattcagcaacttccaaacaaaagatttaggtcgattgcgttatattattgggattgaagtagctcagttccaagaaggcattactatttct |
37917468 |
T |
|
| Q |
409 |
cagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatc |
508 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
37917467 |
cagagaaaatacgttcttgatattttggaagagacagtgatgcttgattgtaaatcagttgatactcatatggaccccaatgtgaagcttttacagaatc |
37917368 |
T |
|
| Q |
509 |
aaggagatttgtatcctgaccaaggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgt |
608 |
Q |
| |
|
||||||||||||||||||||| | | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
37917367 |
aaggagatttgtatcctgacccaagcagatacagaaggttagttgggaaactgaattatcttactatgactagaccagatatttcgtttgctgttagtgt |
37917268 |
T |
|
| Q |
609 |
tgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggtatattaaagggtcgcctggaaaaggacttgtttat |
708 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37917267 |
tgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcggatcttgaggtatattaaagggtcacctggaaaaggacttgtttat |
37917168 |
T |
|
| Q |
709 |
tcatacaga |
717 |
Q |
| |
|
||| ||||| |
|
|
| T |
37917167 |
tcagacaga |
37917159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 73 - 659
Target Start/End: Complemental strand, 7567361 - 7566786
Alignment:
| Q |
73 |
ggggagtatggccttgtttggaggttacaaaaagcattgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaat |
172 |
Q |
| |
|
|||| ||||| ||||||||| | || ||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| | |
|
|
| T |
7567361 |
ggggtgtatgaccttgtttgcaagtaacaaaaatcattgtatggtctaaatcaatcacctcgagcttagttcggaaaattctataaggttattcaacagt |
7567262 |
T |
|
| Q |
173 |
ttggcatgattcgtagtgaaatagatcattctgtattctataaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttat |
272 |
Q |
| |
|
|||| ||||||| | |||||| | ||||| |||||| | |||| |||||| |||||| |||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
7567261 |
ttggtatgattcatggtgaaacatgtcattttgtattttttaaatgttcatatttgaacaaagtcatttagcttgtaatatatgtagatgacattgttat |
7567162 |
T |
|
| Q |
273 |
tattggtaatgatttggaaggcattaaagacctaaagcagcatttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggatt |
372 |
Q |
| |
|
||| |||| ||| |||||||||||||||||||| ||||||||||||| | |||| |||||||||| | ||||||| |||||||||||||| |||||| |
|
|
| T |
7567161 |
tatcggtatagatcaagaaggcattaaagacctaaatcagcatttattcagccactttcaaacaaaagatataggtcggttgcgttattttctagggatt |
7567062 |
T |
|
| Q |
373 |
gaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaata |
472 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||| | ||||||||| |||||||||| ||||||| |||| ||| |
|
|
| T |
7567061 |
---gtagctcagccccaagaaggcattgctatttttcagggaaaatacgttctcgatatctatgaagagaca-ggatgcttgagtgtaaactagttgata |
7566966 |
T |
|
| Q |
473 |
ctcctatgaaccttaatgtgaagcttttacagaatcaaggagatttgtatcctga-ccaaggaagatacagaaggttagttgggaagctgaatcatctta |
571 |
Q |
| |
|
|||| ||| ||| |||||||||||||| ||||||| ||||||| | |||||| | |||||| ||||| |||||| ||||||| |||| | |
|
|
| T |
7566965 |
ctcccatggaccccaatgtgaagctttt--------aaggagagccgtatcctaacccaaggcacatacaggaggttgattgggaggctgaattatctca |
7566874 |
T |
|
| Q |
572 |
ctatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggt |
659 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7566873 |
ctatgactagaccagatatttcgtttgatggtagtgttgtgagtcaacttctgaactcaccttgtgatagccattggaatgtcgtggt |
7566786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 24 - 575
Target Start/End: Original strand, 27518653 - 27519205
Alignment:
| Q |
24 |
cttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagtatggccttgtttggaggttacaaaaagcattgtatggtctaaaa |
123 |
Q |
| |
|
||||||||||| ||| |||||| || | |||| ||||||||||||| |||| || | ||| ||||||| | |||| ||||| ||||||| |||||||| |
|
|
| T |
27518653 |
cttagaagaggcgatgtatatgcagtagccacctggctttattgcttagggtgattttggtcttgtttacaagttagaaaaatcattgtacggtctaaag |
27518752 |
T |
|
| Q |
124 |
caatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtattctataaacgttcat |
223 |
Q |
| |
|
|||||| || || ||| ||| |||||||||||||| |||||||| ||||||||| ||||| | ||||| | |||||||||||| | || || ||||| |
|
|
| T |
27518753 |
caatcagcttgaacttacttttgaaaattcagcaagcttattcaataatttggcaggattcattgtgaagctggtcattctgtattatttagacattcat |
27518852 |
T |
|
| Q |
224 |
ccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcagcatttattcaa |
323 |
Q |
| |
|
| | ||| ||||||||||| || |||||||| ||||| ||| |||||| | |||||||| |||| ||||||| || |||| | |||||||||| |
|
|
| T |
27518853 |
cttcaaacaaagtcatttattgagtggtatatgtggatgatatttttattaccgataatgattaagaagacattaaaaacataaaaaataatttattcaa |
27518952 |
T |
|
| Q |
324 |
caacttccaaacaaaagttttaggtcgattgcgttattttctt-gggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgt |
422 |
Q |
| |
|
| |||| ||||| || |||| | | |||||||| |||| || |||| ||||||| | || | || |||| | |||||||||| |||||||||| || |
|
|
| T |
27518953 |
ccactttcaaaccaattatttaagccaattgcgtttttttttttgggaatgaagtaacacaaacacatgaagctactgctatttcttagagaaaatatgt |
27519052 |
T |
|
| Q |
423 |
tcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatcaaggagatttgtat |
522 |
Q |
| |
|
||||||||| |||| ||| ||| ||||||| ||||||||||||||| ||||||| || ||| |||||||||||||||||| ||||| ||||| | |||| |
|
|
| T |
27519053 |
tcttgatatcttgggagaaacatggatgctcgattgtaaaccagttgctactcctttggaccataatgtgaagcttttacaaaatcatggagagtggtat |
27519152 |
T |
|
| Q |
523 |
cctgaccaaggaagatacagaaggttagttgggaagctgaatcatcttactat |
575 |
Q |
| |
|
||||| | || |||||||| ||| |||||| ||| |||||| |||| ||||| |
|
|
| T |
27519153 |
cctgatccagacagatacaggaggctagttgtgaaactgaattatctcactat |
27519205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 119 - 509
Target Start/End: Complemental strand, 27464760 - 27464370
Alignment:
| Q |
119 |
taaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtattctataaacg |
218 |
Q |
| |
|
|||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| | ||||| ||||| | | |||||| | || | |
|
|
| T |
27464760 |
taaatcaatcacctcgatcttggttcagaaaactcagcaaggttattcaacaatttggcatgattctttgtgaagctgatcaatttatattcttttaaag |
27464661 |
T |
|
| Q |
219 |
ttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcagcattta |
318 |
Q |
| |
|
|||||| | |||| |||||||||||||||| ||| |||| ||||||||||||||| |||| || | ||| | |||| ||||| ||| || |||||| |
|
|
| T |
27464660 |
ttcatcttcgaacaaagtcatttatcttgtgttatgtgtaaatgacattgttattaccagtaaggactaagaatgaattagagaccaaaaacaacattta |
27464561 |
T |
|
| Q |
319 |
ttcaacaac-ttccaaacaaaagttttaggtcgattgcgt--tattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaa |
415 |
Q |
| |
|
||| | | ||||||| |||| |||||||| || || ||| ||||| ||| |||||||||||| || || | ||||| |||||||||||||| |
|
|
| T |
27464560 |
ttcggccgctttccaaaaaaaa---ttaggtcggttatgttatatgttcttcggactgaagtagctcaatcacagactgtcattgttatttctcagagaa |
27464464 |
T |
|
| Q |
416 |
aatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatca |
509 |
Q |
| |
|
|||| ||| || |||| |||||||| ||| ||||||| |||||||||||| || ||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
27464463 |
aatatgtttttcatatcttggaagaaacaaggatgctcgattgtaaaccaattgatactcctatgaaccctgatgtgaagcctttacagaatca |
27464370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 46594752 - 46594685
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| |||||||||||| |
|
|
| T |
46594752 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaggggg |
46594685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 13040664 - 13040739
Alignment:
| Q |
109 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattc |
184 |
Q |
| |
|
||||||||||| |||||||| |||||||| |||||||| | |||||| || ||| ||||||||| ||||||||||| |
|
|
| T |
13040664 |
ttgtatggtctcaaacaatcccctcgagcatggtttgggagattcagtaatgttgttcaacaatatggcatgattc |
13040739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 22503645 - 22503577
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggga |
77 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| |||||||| | ||| ||| |||||| |||||| |
|
|
| T |
22503645 |
tttcttgcatggtgacttggaagaagagatttatattgagcaacctcctgggtttgttgctcgggggga |
22503577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37076107 - 37076174
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||| ||||||||||||| ||||| |||||||||||||||||||| | ||| ||| ||||||| |||| |
|
|
| T |
37076107 |
tttcctgcatggtgacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaagggg |
37076174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 660
Target Start/End: Original strand, 13041083 - 13041212
Alignment:
| Q |
531 |
aggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactca |
630 |
Q |
| |
|
|||||| ||| | ||||||||||||||||||||| || | || ||||| ||||| |||||||| | || || | ||||| |||||||| ||||| || |
|
|
| T |
13041083 |
aggaaggtaccggaggttagttgggaagctgaattatttgaccatgacaagacctgatatttcatatgcagtcactgttgttagtcaattcttgaattcc |
13041182 |
T |
|
| Q |
631 |
ccttgtgatagccattggaatgtcgtggtt |
660 |
Q |
| |
|
|||||||||| |||||| |||| |||||| |
|
|
| T |
13041183 |
ccttgtgatattcattgggatgttgtggtt |
13041212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 37076444 - 37076545
Alignment:
| Q |
397 |
attgctatttctcagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagc |
496 |
Q |
| |
|
|||||||| |||||||| || || | |||||||||||||| || ||||| | | ||||||||||||||| ||||||||||| | | ||||||||||| |
|
|
| T |
37076444 |
attgctatctctcagaggaagtatgcccttgatattttggacgaaacaggtcttatagattgtaaaccagttgatactcctatggatcctaatgtgaagc |
37076543 |
T |
|
| Q |
497 |
tt |
498 |
Q |
| |
|
|| |
|
|
| T |
37076544 |
tt |
37076545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 50961803 - 50961847
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaacc |
53 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||||||||||||||| |
|
|
| T |
50961803 |
tttcttgcatggtgacctggaagaagagatttatatggagcaacc |
50961847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 20706197 - 20706259
Alignment:
| Q |
16 |
catggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagt |
79 |
Q |
| |
|
||||| || |||||| |||||||| ||||||||||||||| ||| ||| ||||||||||||||| |
|
|
| T |
20706197 |
catggagatttagaaaaggagatt-atatggagcaaccacctggatttgttgctcagggggagt |
20706259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 446
Target Start/End: Complemental strand, 46594407 - 46594316
Alignment:
| Q |
355 |
cgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagg |
446 |
Q |
| |
|
||||| |||||||||||||| || ||||| || | |||||||||||| |||||||||||||| | ||||||||||| || |||||||| |
|
|
| T |
46594407 |
cgttactttcttgggattgaggtggctcaatcaaagtcaggcattgctatctctcagagaaaatatgcccttgatattttagaggagacagg |
46594316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 355 - 497
Target Start/End: Complemental strand, 22503300 - 22503158
Alignment:
| Q |
355 |
cgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagggatgcttg |
454 |
Q |
| |
|
||||| |||||||||||||| || ||||| || | |||||||||||| ||||||| |||||| | ||||||||||| || |||||||| | | | |
|
|
| T |
22503300 |
cgttactttcttgggattgaggtggctcaatcaaagtcaggcattgctatctctcagataaaatatgcccttgatattttagaggagacaggtcttatag |
22503201 |
T |
|
| Q |
455 |
attgtaaaccagttaatactcctatgaaccttaatgtgaagct |
497 |
Q |
| |
|
|||| |||||||| | ||||||||| | | |||||||||||| |
|
|
| T |
22503200 |
attgcaaaccagtcgacactcctatggatcataatgtgaagct |
22503158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 607 - 681
Target Start/End: Complemental strand, 23298868 - 23298794
Alignment:
| Q |
607 |
gttgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggtatattaaa |
681 |
Q |
| |
|
|||| |||||||||| | |||| ||||| ||||||||||||||| ||||||| |||||| |||||||||||| |
|
|
| T |
23298868 |
gttgcgagtcaatttctaaactgggcttgtaatagccattggaatgcagtggttcggatcttaaggtatattaaa |
23298794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 444
Target Start/End: Original strand, 50962148 - 50962237
Alignment:
| Q |
355 |
cgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagaca |
444 |
Q |
| |
|
||||| |||||||||||||| || ||||| || | |||||||||||| |||||||||||||| | ||||||||||| || |||||| |
|
|
| T |
50962148 |
cgttactttcttgggattgaggtggctcaatcaaagtcaggcattgctatctctcagagaaaatatgcccttgatattttagaggagaca |
50962237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 533; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 79 - 728
Target Start/End: Complemental strand, 18417426 - 18416773
Alignment:
| Q |
79 |
tatggccttgtttggaggttacaaaaagcattgtat----ggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaattt |
174 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
18417426 |
tatggccttgtttgcaagttacaaaaagcattgtatatatggtataaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacagttt |
18417327 |
T |
|
| Q |
175 |
ggcatgattcgtagtgaaatagatcattctgtattctataaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttatta |
274 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18417326 |
ggcatgatttgtagtgaaacggatcattttgtattctatgagcgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacatggttatta |
18417227 |
T |
|
| Q |
275 |
ttggtaatgatttggaaggcattaaagacctaaagcagcatttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggattga |
374 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18417226 |
ttggtaatgatttggaaggcattaaagacctaaagcagcatttattcagcaacttccaaacaaaagatttaggtcgattgcgttattttcttgggattga |
18417127 |
T |
|
| Q |
375 |
agtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatact |
474 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
18417126 |
agtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagatagggatgcttgattgtaaaccagttgatact |
18417027 |
T |
|
| Q |
475 |
cctatgaaccttaatgtgaagcttttacagaatcaaggagatttgtatcctgaccaaggaagatacagaaggttagttgggaagctgaatcatcttacta |
574 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
18417026 |
cctatgaaccccaatgtgaagcttttacagaatcaaggagatttgtatcctgacccaggaagatacagaagtttagttgggaagctgaattatcttacta |
18416927 |
T |
|
| Q |
575 |
tgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggta |
674 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18416926 |
tgactagaccagatatttcgtttgatgttagtgttgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggtttgaatcttgaggta |
18416827 |
T |
|
| Q |
675 |
tattaaagggtcgcctggaaaaggacttgtttattcatacagaggacataccaa |
728 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18416826 |
tattaaagggtcacctggaaaaggacttgtttattcatacagaggacataccaa |
18416773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 14 - 724
Target Start/End: Original strand, 52963246 - 52963945
Alignment:
| Q |
14 |
tgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagtatggccttgtttggaggttacaaaaagcattgta |
113 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||| |
|
|
| T |
52963246 |
tgcatggtgacttacaagatgagatttatatggagcaaccacc-ggctttattgctc-gggggagtatggccttgtttgcatgttacaaaaatcattgta |
52963343 |
T |
|
| Q |
114 |
tggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtattctat |
213 |
Q |
| |
|
|||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||| |||||||| | |
|
|
| T |
52963344 |
tggtttaaaacaatcacctcgggcttggttcagaaaattcagcaaggttattcaacagtttgccatgattcgtagtgaaacatatcattatgtattcttt |
52963443 |
T |
|
| Q |
214 |
aaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcagc |
313 |
Q |
| |
|
|||| |||||| |||||| ||||||| ||| | || |||||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
52963444 |
aaacattcatctttgaacaaagtcatctatttggttgtatatgtagatgatattgttattaccggtaatgatcaagaacgcattaaagacctaaagcagc |
52963543 |
T |
|
| Q |
314 |
atttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagag |
413 |
Q |
| |
|
||||||||| | |||| |||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
52963544 |
atttattcagccactttcaaacaaaagatttaggtcaattgcgttattttattgagattgaagtagctcagtcccaagaaggcattgttacttctcagag |
52963643 |
T |
|
| Q |
414 |
aaaatacgttcttgatattttggaagagacagggatgcttgat------tgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaat |
507 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
52963644 |
aaa-----------atattttggaagagacaaggatgcttgattgtaaatgtaaaccagttgatactcctatggaccccaatgtgaagcttttactgaat |
52963732 |
T |
|
| Q |
508 |
caaggagatttgtatcctgaccaaggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcg |
607 |
Q |
| |
|
|||| ||| |||||| || ||| ||| |||| ||||||||||||||||||||| |||| ||| |||||||||||||| || |||||||||||| | |
|
|
| T |
52963733 |
caagtagagttgtattctaacccaggcagat----gaggttagttgggaagctgaattatctcactgcgactagaccagatactttgtttgttgttagtg |
52963828 |
T |
|
| Q |
608 |
ttgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggtatattaaagggtcgcctggaaaaggacttgttta |
707 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||| || ||| || |||| ||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
52963829 |
ttgtaagtcaatttctgaactcaccttgtgatagccattcgactgttgtagttcgaatcttgaggtatattaaagggtcacctggaaaaggacttattta |
52963928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 33 - 647
Target Start/End: Complemental strand, 19937869 - 19937257
Alignment:
| Q |
33 |
ggagatttatatggagcaaccacttggctttattgctcagggggagtatggccttgtttggaggttacaaaaagcattgtatggtctaaaacaatcacct |
132 |
Q |
| |
|
|||||||||||||||||||| || || |||| | |||||| | |||| | | ||||||| | |||||||| |||| ||||||||||||||||||||| |
|
|
| T |
19937869 |
ggagatttatatggagcaactacctgactttgtagctcagtgcgagtctagtcttgtttccaaactacaaaaaacattttatggtctaaaacaatcacct |
19937770 |
T |
|
| Q |
133 |
cgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtattctataaacgttcatccttgaacc |
232 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||| |||||||| | ||||| ||||||||||||||| | || ||||||||| |||||| |
|
|
| T |
19937769 |
cgagcttggtttggacaattcagcaaggttattcaacagtttgccatgattcattgtgaagcagatcattctgtattttttagacgttcatctttgaaca |
19937670 |
T |
|
| Q |
233 |
aagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcagcatttattcaacaacttcca |
332 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| |||||||||| | || ||||| ||||||||||||||||||||||| |||||| ||||| |||| || |
|
|
| T |
19937669 |
aagtcatttatcttgtggtatatttagatgatattgttattacttgtgatgatcaagaaggcattaaagacctaaagcaacatttactcaaccactttca |
19937570 |
T |
|
| Q |
333 |
aacaaaagttttaggtcgattgcgttattttcttgggattgaagtagc-tcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatat |
431 |
Q |
| |
|
|| |||| ||||||||||||||||| ||||||||||||||||||||| | |||| | | | ||||||| |||| |||||||| ||||||||||| |
|
|
| T |
19937569 |
taccaaagatttaggtcgattgcgttcttttcttgggattgaagtagcttaagtcaccggcggatattgcta--tctctaagaaaatatgttcttgatat |
19937472 |
T |
|
| Q |
432 |
tttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatcaaggagatttgtatcctgaccaa |
531 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||| ||| |||||||||| | | |||||||||||| || |||||| | || |||| ||| | |
|
|
| T |
19937471 |
cttggaagaaacaaggatgcttgattgtaaaccggttgatactcctatagatcccaatgtgaagcttctatggaatcagcgggagccatatctgaaccca |
19937372 |
T |
|
| Q |
532 |
ggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactcac |
631 |
Q |
| |
|
| | ||||||||||||||||| ||| |||||||| || |||||||| | |||| |||||| ||||||||||| ||||||||||||||| | || |||| |
|
|
| T |
19937371 |
tgcaaatacagaaggttagttgagaaactgaatcacctcactatgacaaaaccatatattt-ttttgttgttagtgttgtgagtcaatttctaaattcac |
19937273 |
T |
|
| Q |
632 |
cttgtgatagccattg |
647 |
Q |
| |
|
||| ||||| |||||| |
|
|
| T |
19937272 |
cttttgataaccattg |
19937257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 18419589 - 18419514
Alignment:
| Q |
8 |
ttttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagtatgg |
83 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
18419589 |
ttttcttgcatggtgacttagaaaaagaggtttatatggagcaaccatttggctttattgctcagtgggagtatgg |
18419514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 474
Target Start/End: Original strand, 36427994 - 36428112
Alignment:
| Q |
356 |
gttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagggatgcttga |
455 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || | | | |||||||||||| | ||||||| ||||| |||| ||||||||||| || |||||| |
|
|
| T |
36427994 |
gttattttcttgggattgaagttactcagtcgcacgcaaccgttgctatttctctgtgaaaatatgttctctatatcttggaagagacgaagaagcttga |
36428093 |
T |
|
| Q |
456 |
ttgtaaaccagttaatact |
474 |
Q |
| |
|
|||||||||| || ||||| |
|
|
| T |
36428094 |
ttgtaaaccaattgatact |
36428112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 710
Target Start/End: Complemental strand, 19937016 - 19936964
Alignment:
| Q |
658 |
gttcagatcttgaggtatattaaagggtcgcctggaaaaggacttgtttattc |
710 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||| || ||||||||||||| |
|
|
| T |
19937016 |
gttcggatcttgaggtgtattaaagggtcgcttggagaatgacttgtttattc |
19936964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 41489616 - 41489522
Alignment:
| Q |
112 |
tatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgt |
206 |
Q |
| |
|
|||||||| |||||||| |||| |||||||||||| | |||||||| || | ||||| ||||| |||||||||||| || ||||||||||| |
|
|
| T |
41489616 |
tatggtcttaaacaatctcctcaagcttggtttggcagattcagcacagtagtgcaacagtttggtatgattcgtagtcaagccgatcattctgt |
41489522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 417; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 9 - 728
Target Start/End: Original strand, 36999930 - 37000646
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggagtatggccttgtttggaggttacaaaaagca |
108 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| |||| | ||||||| | |||||||||| || |
|
|
| T |
36999930 |
tttcttgcatggtgacttggaagaggagatttatatggagcaaccgcctggctttattgctcagggg-agtacgatcttgttttcaagttacaaaaatca |
37000028 |
T |
|
| Q |
109 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtat |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37000029 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaatagtttggcatgattcgtagtgaaacagatcattctgtat |
37000128 |
T |
|
| Q |
209 |
tctataaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaa |
308 |
Q |
| |
|
||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||| |
|
|
| T |
37000129 |
tctttaaacgttcatctttgaacccagtcatttatcttgtagtatatgtagatgacattgttatcactggcaatgatcaagaaggcattaaagacctaaa |
37000228 |
T |
|
| Q |
309 |
gcagcatttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttct |
408 |
Q |
| |
|
||| | |||||||| | |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
37000229 |
gcaacgtttattcagccactttcaaacaaaagatttaggtcgattgtgttattttcttgggattgaagtagcttggtcccaagtaggcattgttatttct |
37000328 |
T |
|
| Q |
409 |
cagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatc |
508 |
Q |
| |
|
||||||||||||||| | ||||| |||||||| ||| |||||||| |||||||||||| | |||||| | || ||| |||||||||||||||| ||| | |
|
|
| T |
37000329 |
cagagaaaatacgttttcgatatcttggaagaaacatggatgcttaattgtaaaccagatgatactcatgtggaccccaatgtgaagcttttacggaacc |
37000428 |
T |
|
| Q |
509 |
aaggagatttgtatcctgaccaaggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgt |
608 |
Q |
| |
|
||||||||||||||||| ||| | |||||||||| |||| |||||||| ||| ||| |||| | |||||||||| || |||||||||||||| |||| || |
|
|
| T |
37000429 |
aaggagatttgtatcctaacccaagaagatacaggaggtaagttgggaggctaaattatctcaatatgactagagcatatatttcgtttgtttttagtgt |
37000528 |
T |
|
| Q |
609 |
tgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggtatattaaagggtcgcctggaaaaggacttgtttat |
708 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37000529 |
--tgagtcaattttttatctcaccttgtgatagccattggaatgctgtggttcggatcttgcggtatattaaagggtcgcctgaaaaaggacttgtttat |
37000626 |
T |
|
| Q |
709 |
tcatacagaggacataccaa |
728 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
37000627 |
tcagacagaggccataccaa |
37000646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 43736046 - 43736090
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaacc |
53 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
43736046 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacc |
43736090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 213 - 659
Target Start/End: Original strand, 8984122 - 8984557
Alignment:
| Q |
213 |
taaacgttcatccttgaaccaagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcag |
312 |
Q |
| |
|
|||| |||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || |
|
|
| T |
8984122 |
taaatgttcatatttgaacaaagtcatttagcttgtaatatatgtagatgacattgttattattggtaatggtcaagaaggcattaaagacctaaaggag |
8984221 |
T |
|
| Q |
313 |
catttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcaga |
412 |
Q |
| |
|
|||||||||| | |||| |||||||||| | |||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
8984222 |
catttattcagccactttcaaacaaaagatataggtcgattacgttattttctagggatt---gtagctcagccccaagaaggcattgctatttttcagg |
8984318 |
T |
|
| Q |
413 |
gaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagttaatactcctatgaaccttaatgtgaagcttttacagaatcaagg |
512 |
Q |
| |
|
||||||||||||| ||||| | ||||||||| |||||||||| ||||||| |||| |||||||||| ||| |||||||||||||| |||| |
|
|
| T |
8984319 |
gaaaatacgttctcgatatctatgaagagaca-ggatgcttgagtgtaaactagttgatactcctatagaccccaatgtgaagctttt--------aagg |
8984409 |
T |
|
| Q |
513 |
agatttgtatcctga-ccaaggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgttgt |
611 |
Q |
| |
|
||| ||||||||| |||||| | |||||| ||||| |||||| ||||||| |||| |||||||||||||||||||||||||||| || ||| ||||| |
|
|
| T |
8984410 |
agagccgtatcctgacccaaggcacatacaggaggttgattgggaggctgaattatctcactatgactagaccagatatttcgtttgatggtagtgttgt |
8984509 |
T |
|
| Q |
612 |
gagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggt |
659 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8984510 |
gagtcaacttctgaactcaccttgtgatagccattggaatgtcgtggt |
8984557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 8984023 - 8984120
Alignment:
| Q |
73 |
ggggagtatggccttgtttggaggttacaaaaagcattgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaaca |
170 |
Q |
| |
|
|||| ||||| ||||||||| | || ||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
8984023 |
ggggtgtatgaccttgtttgcaagtaacaaaaatcattgtatggtctaaatcaatcacctcgagcttagttcggaaaattctataaggttattcaaca |
8984120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 40543758 - 40543694
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagg |
73 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| | ||| ||| ||||||||| |
|
|
| T |
40543758 |
tttcttgcatggtgacttagaagaagagatttatatggagcaacctcctgggtttgttgctcagg |
40543694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 7928337 - 7928404
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| ||||||| |||| |
|
|
| T |
7928337 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaagggg |
7928404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 45183445 - 45183378
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| ||||||| |||| |
|
|
| T |
45183445 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaagggg |
45183378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 42358291 - 42358247
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaacc |
53 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
42358291 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacc |
42358247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 44264335 - 44264291
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaacc |
53 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
44264335 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacc |
44264291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 6999845 - 6999914
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcagggggag |
78 |
Q |
| |
|
||||||||||||||| || ||||| |||||||||||||||||||| | || ||| ||||||| |||||| |
|
|
| T |
6999845 |
tttcttgcatggtgagttggaagaagagatttatatggagcaacctcctgagtttgttgctcaaggggag |
6999914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 446
Target Start/End: Complemental strand, 40543412 - 40543321
Alignment:
| Q |
355 |
cgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagg |
446 |
Q |
| |
|
||||| |||||||||||||| || ||||| || | |||||||||||| |||||||||||||| | ||||||||||| || |||||||| |
|
|
| T |
40543412 |
cgttactttcttgggattgaggtggctcaatcaaagtcaggcattgctatctctcagagaaaatatgcccttgatattttagaggagacagg |
40543321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 355 - 445
Target Start/End: Original strand, 7928683 - 7928773
Alignment:
| Q |
355 |
cgttattttcttgggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacag |
445 |
Q |
| |
|
||||| |||||||||||||| || ||||| || | |||||||||||| |||||||||||||| | ||||||||||| || ||||||| |
|
|
| T |
7928683 |
cgttactttcttgggattgaggtggctcaatcaaagtcaggcattgctatctctcagagaaaatatgcccttgatattttagaggagacag |
7928773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 178; Significance: 1e-95; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 73 - 661
Target Start/End: Complemental strand, 32332081 - 32331489
Alignment:
| Q |
73 |
ggggagtatggccttgtttggaggttacaaaaag-cattgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaa |
171 |
Q |
| |
|
||||||||||| || || || | ||||||||||| ||||| |||||| ||| ||||||| |||||||||||| |||||||||| ||||||||||||| | |
|
|
| T |
32332081 |
ggggagtatggtctcgtatgcaagttacaaaaagacattggatggtcgaaagcaatcacatcgagcttggttcggaaaattcaacaaggttattcaaaat |
32331982 |
T |
|
| Q |
172 |
tttggcatgattcgtagtgaaatagatcattctgtattctataaacgttcatccttgaaccaagtcatttatcttgtagtatatgt----agatgacatt |
267 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| || ||||||||| |||||| ||||| || |||||| |||||| | | |||| ||| |
|
|
| T |
32331981 |
tttggcatgattcgttgtgaagcagatcattctgtattctttagacgttcatctttgaacaaagtcgtt-atcttgcggtatatatgtatatatgatatt |
32331883 |
T |
|
| Q |
268 |
gttattattggtaatgatttggaaggcattaaagacctaaagcagcatttattcaacaacttccaaacaaaagttttaggtcgattgcgttattttcttg |
367 |
Q |
| |
|
||||| | | | ||||| |||| |||||||||||||||| | || ||||||||| |||| | || ||| ||| ||| |||| | |||||||||| |
|
|
| T |
32331882 |
gttatcactagcgatgatcaagaagacattaaagacctaaagtaacacttattcaaccactttctcactcaagatttcagtcaattgtggtattttcttg |
32331783 |
T |
|
| Q |
368 |
ggattgaagtagctcagtcccaagaaggcattgctatttctcagagaaaatacgttcttgatattttggaagagacagggatgcttgattgtaaaccagt |
467 |
Q |
| |
|
|||||||||| |||||||| || |||| |||||||||||||||||||||||| ||||||||||| ||| |||||||| |||| ||||||| ||| ||||| |
|
|
| T |
32331782 |
ggattgaagttgctcagtctcatgaagacattgctatttctcagagaaaatatgttcttgatatcttgaaagagacatggattcttgattctaatccagt |
32331683 |
T |
|
| Q |
468 |
taatactcctat-gaaccttaatgtgaagcttttacagaatcaaggagatttgtatcctgaccaaggaagatacagaaggttagttgggaagctgaatca |
566 |
Q |
| |
|
| ||||| | || ||||| ||||||||||||| |||| ||||||||||| |||||| ||| ||| ||||| | |||||||||||||| | |||| | |
|
|
| T |
32331682 |
tgatacttccatagaacc-taatgtgaagcttctacataatcaaggagagccatatcctaacctaggcagatagatgaggttagttgggaaaccgaatta |
32331584 |
T |
|
| Q |
567 |
tcttactatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttc |
661 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||| | ||||||| || |||| | ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
32331583 |
tcttactatgaccagaccgtatatttcgttttctgttggtgttgtgaatctatttataaactcaccttgtgatagtaattggaatgtcgtggttc |
32331489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 21285673 - 21285740
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| |||||||||||| |
|
|
| T |
21285673 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaggggg |
21285740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 660
Target Start/End: Complemental strand, 30592377 - 30592248
Alignment:
| Q |
531 |
aggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactca |
630 |
Q |
| |
|
|||||| ||| | ||||||||||||||||||||| || | || ||||| ||||| |||||||| | || || || ||||| |||||||| ||||| || |
|
|
| T |
30592377 |
aggaaggtaccggaggttagttgggaagctgaattatttgaccatgacaagacctgatatttcatatgcagtcagtgttgttagtcaattcttgaattcc |
30592278 |
T |
|
| Q |
631 |
ccttgtgatagccattggaatgtcgtggtt |
660 |
Q |
| |
|
|||||||||| ||||||| ||| |||||| |
|
|
| T |
30592277 |
ccttgtgatattcattggattgttgtggtt |
30592248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 20553 - 20620
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| ||||||||||| | ||| ||| |||||| ||||| |
|
|
| T |
20553 |
tttcttgcatggtgacttggaagaagagatttacatggagcaacctcctgggtttgttgctcgggggg |
20620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 75; Significance: 4e-34; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 30781913 - 30781711
Alignment:
| Q |
138 |
ttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgtattctataaacgttcatccttgaaccaagtc |
237 |
Q |
| |
|
||||||||| |||| || |||||||||| || | |||| |||||||| |||||||| | |||||||| |||||| |||| ||| || |||||| ||||| |
|
|
| T |
30781913 |
ttggtttgggaaatccaacaaggttatttaatattttgacatgattcatagtgaaacaaatcattctctattctttaaatgtttatatttgaacaaagtc |
30781814 |
T |
|
| Q |
238 |
atttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcagcatttattcaacaacttccaaacaa |
337 |
Q |
| |
|
|||||||||| ||||||||| |||| |||||||||| | |||||||| |||||||||||| | ||||| || |||||||||||| |||| ||||||| |
|
|
| T |
30781813 |
gtttatcttgtcgtatatgtaaatgatattgttattactagtaatgatcaagaaggcattaaaaatctaaaacaacatttattcaaccactttcaaacaa |
30781714 |
T |
|
| Q |
338 |
aag |
340 |
Q |
| |
|
||| |
|
|
| T |
30781713 |
aag |
30781711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 340
Target Start/End: Original strand, 30180187 - 30180292
Alignment:
| Q |
233 |
aagtcatttatcttgtagtatatgtagatgacattgttattattggtaatgatttggaaggcattaaagacctaaagcagcatttattcaacaacttcca |
332 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| |||||||||| |||||||| | |||||||||||||| ||||| || || ||||||||| |||| || |
|
|
| T |
30180187 |
aagtcatttatcttgtggtatatgtaaatgatattgttattaccggtaatga-taagaaggcattaaagatctaaaacaaca-ttattcaaccactttca |
30180284 |
T |
|
| Q |
333 |
aacaaaag |
340 |
Q |
| |
|
|||||||| |
|
|
| T |
30180285 |
aacaaaag |
30180292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 34769295 - 34769228
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| |||||||||||| |
|
|
| T |
34769295 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaggggg |
34769228 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 38505362 - 38505406
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaacc |
53 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
38505362 |
tttcttgcatggtgacttggaagaagagatttatatggagcaacc |
38505406 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 640
Target Start/End: Original strand, 17726411 - 17726520
Alignment:
| Q |
531 |
aggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactca |
630 |
Q |
| |
|
|||||| ||| | ||||||||||||||||||||| || | || ||||| ||||| |||||||| | || || || ||||| |||||||| ||||| || |
|
|
| T |
17726411 |
aggaaggtaccggaggttagttgggaagctgaattatttgaccatgacaagacctgatatttcatatgcagtcagtgttgttagtcaattcttgaattcc |
17726510 |
T |
|
| Q |
631 |
ccttgtgata |
640 |
Q |
| |
|
|||||||||| |
|
|
| T |
17726511 |
ccttgtgata |
17726520 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 17726065 - 17726137
Alignment:
| Q |
109 |
ttgtatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatga |
181 |
Q |
| |
|
||||||||||| |||||||| | |||||| |||||||| | |||||| || ||| ||||||||| |||||||| |
|
|
| T |
17726065 |
ttgtatggtctcaaacaatcccgtcgagcatggtttgggagattcagtaatgttgttcaacaatatggcatga |
17726137 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 35001007 - 35000930
Alignment:
| Q |
613 |
agtcaatttttgaactcaccttgtgatagccattggaatgtcgtggttcagatcttgaggtatattaaagggtcgcct |
690 |
Q |
| |
|
||||||||| | ||||||||||||||| || ||||||||| || |||||||||| |||||||| ||||||||||||| |
|
|
| T |
35001007 |
agtcaatttcttaactcaccttgtgatggcaattggaatgaagtagttcagatctagaggtatactaaagggtcgcct |
35000930 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 36499845 - 36499912
Alignment:
| Q |
9 |
tttcttgcatggtgacttagaagaggagatttatatggagcaaccacttggctttattgctcaggggg |
76 |
Q |
| |
|
||||||||||||| |||| ||||| |||||||||||||||||||| | ||| ||| ||||||| |||| |
|
|
| T |
36499845 |
tttcttgcatggtaacttggaagaagagatttatatggagcaacctcctgggtttgttgctcaagggg |
36499912 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 14167344 - 14167250
Alignment:
| Q |
112 |
tatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgt |
206 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||| ||||| |||| || | ||||||||||| |||||||||||| || ||||||||||| |
|
|
| T |
14167344 |
tatggtcttaaacaatctcctcgagcttggtttgacaaattaagcacagtagtgcaacaatttggtatgattcgtagtcaagccgatcattctgt |
14167250 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 55255329 - 55255423
Alignment:
| Q |
112 |
tatggtctaaaacaatcacctcgagcttggtttggaaaattcagcaaggttattcaacaatttggcatgattcgtagtgaaatagatcattctgt |
206 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| | |||||||| || | ||||| ||||| |||||||||||| || ||||||||||| |
|
|
| T |
55255329 |
tatggtcttaaacaatctcctcgagcttggtttggcagattcagcacagtagtgcaacagtttggtatgattcgtagtcaagccgatcattctgt |
55255423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 640
Target Start/End: Original strand, 53990153 - 53990262
Alignment:
| Q |
531 |
aggaagatacagaaggttagttgggaagctgaatcatcttactatgactagaccagatatttcgtttgttgttagcgttgtgagtcaatttttgaactca |
630 |
Q |
| |
|
|||||| ||| | ||||||||||||||||||||| || | || ||||| ||||| |||||||| | || || || ||||| |||||||| ||||| || |
|
|
| T |
53990153 |
aggaaggtaccggaggttagttgggaagctgaattatttgaccatgacaagacctgatatttcatatgcagtcagtgttgttagtcaattcttgaattcc |
53990252 |
T |
|
| Q |
631 |
ccttgtgata |
640 |
Q |
| |
|
|||||||||| |
|
|
| T |
53990253 |
ccttgtgata |
53990262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 35001667 - 35001626
Alignment:
| Q |
117 |
tctaaaacaatcacctcgagcttggtttggaaaattcagcaa |
158 |
Q |
| |
|
|||||| |||| |||||||||||||||||| ||||||||||| |
|
|
| T |
35001667 |
tctaaagcaataacctcgagcttggtttggtaaattcagcaa |
35001626 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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