View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071-Insertion-8 (Length: 468)
Name: NF2071-Insertion-8
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071-Insertion-8 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 8 - 468
Target Start/End: Complemental strand, 7542582 - 7542122
Alignment:
| Q |
8 |
atttaaacgtgctgaaaccgtaggggaagacaatttatcctcagtttgagccttcatccatgttaacatattttgccatcttaatgtcacattacttccc |
107 |
Q |
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| T |
7542582 |
atttaaacgtgctgaaaccgtaggggaagacaatttatcctcagtttgagccttcatccatgttaacatattttgccatcttaatgtcacattacttccc |
7542483 |
T |
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| Q |
108 |
atgtttgaaaacatttcttcaggtataggtatttcaagaacagtttccaatccatcttctttgtctatgtttggacataacctccttaatgatgattttg |
207 |
Q |
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| T |
7542482 |
atgtttgaaaacatttcttcaggtataggtatttcaagaacagtttccaatccatcttctttgtctatgtttggacataacctccttaatgatgattttg |
7542383 |
T |
|
| Q |
208 |
cagcaggttgtttcatttgattagtgtgagattgagacaagtgaagaatttgatgagagaaaattaaggaagagggttatagtcaaaaggctaaatcatc |
307 |
Q |
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| T |
7542382 |
cagcaggttgtttcatttgattagtgtgagattgagacaagtgaagaatttgatgagagaaaattaaggaagagggttatagtcaaaaggctaaatcatc |
7542283 |
T |
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| Q |
308 |
tttaattaatgtatgaacattgagaaggtgatgttaattagaaggttgtccttgtttataggtgttgtatgggcacaaattatggtttgttatgtttgat |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
7542282 |
tttaattaatgtatgaacattgagaaggtgatgttaattagaaggttgtccttgtttataggtgttgtatgggcacaaattatggtttgttgtgtttgat |
7542183 |
T |
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| Q |
408 |
tgttttttgcttaagtttctatttaaagatttaatccatgatttttgcttatagctagtag |
468 |
Q |
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| T |
7542182 |
tgttttttgcttaagtttctatttaaagatttaatccatgatttttgcttatagctcgtag |
7542122 |
T |
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