View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_high_106 (Length: 218)
Name: NF2071_high_106
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_high_106 |
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Alignment Details
Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 5293362 - 5293231
Alignment:
| Q |
70 |
aaaactacatagcccacattccaatgtctcaagataacagcactagttaggtgttaataatgatgtttccnnnnnnnnnnnnnnnataatttgtggttgt |
169 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
5293362 |
aaaactacatagcccacattccaatgtctcaagataacagcactagttaggtgttaataatgatgtttcc-tttttttactttttataatttgtggttgt |
5293264 |
T |
|
| Q |
170 |
gctcaaatccaaaatatttgtgtgtgaccatat |
202 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
5293263 |
gctcaaatccaaaatatttgtgtgtgaccatat |
5293231 |
T |
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