View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_high_38 (Length: 407)
Name: NF2071_high_38
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF2071_high_38 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 393
Target Start/End: Complemental strand, 3818842 - 3818467
Alignment:
Q |
16 |
tggtcatccctaattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgatcttgnnnnnnnnnnnnnnnnn |
115 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
3818842 |
tggtcatccctaattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgatcttgtttttttttctttttct |
3818743 |
T |
|
Q |
116 |
nnnnaacaacttaattgataacatttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttctt |
215 |
Q |
|
|
||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||| |
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|
T |
3818742 |
ttt-aacaacttaattgataatatttgtcattaaaaaaaa-cttttattttaaggataaaattgatgtgcattttcttacgtgcttttagtgtggttctt |
3818645 |
T |
|
Q |
216 |
cacatgaaattaactttgtggttatagaaaaatttgagaaaattatggatttgataaatcatggatagttataagtatttcatgtaaagaaccacatcaa |
315 |
Q |
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|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
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|
T |
3818644 |
cacatgaaattaactttgtggttatagaaaaaattgagaaaattatggatttgagaaatcatggatagttataaacatttcatgtaaagaaccacatcaa |
3818545 |
T |
|
Q |
316 |
atgcatataagttctgtccttaggtgcttttcgtatgattcctaactaaactactcatgtttttcatgaatccaccat |
393 |
Q |
|
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
3818544 |
atgcatataagttttgcccttaggtgcttttcgtatgattcctaactaaactactcatgtttttcatgaatccaccat |
3818467 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 33355162 - 33355308
Alignment:
Q |
168 |
aggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaattaactt--tgtggttatagaaaaatttgagaaaattatggat |
265 |
Q |
|
|
||||||||| |||||||||||| |||| || ||||| || ||||||||||||| ||||| |||| |||| ||||| ||| ||||||||| || ||||| |
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|
T |
33355162 |
aggacaaaacttaggtgcatttccttatgtactttttgtatggttcttcacataaaattcacttgttgtgcttataacaaactttgagaaatttgtggat |
33355261 |
T |
|
Q |
266 |
ttgataaatcatggatagttataagtatttcatgtaaagaaccacat |
312 |
Q |
|
|
|||| ||||||| | ||||||| ||||||| |||| ||||||||||| |
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|
T |
33355262 |
ttgagaaatcattggtagttatgagtatttgatgtgaagaaccacat |
33355308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 3808275 - 3808177
Alignment:
Q |
120 |
aacaacttaattgataacatttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcac |
218 |
Q |
|
|
||||||||||||| |||||||||||||||| |||| | |||||| ||||||||| || |||||||||||||| ||| || |||| || |||||||| |
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|
T |
3808275 |
aacaacttaattgccaacatttgtcattaaaaaaaaatatatatttttaggacaaaactttggtgcattttcttatgtgtttctcgtatgcttcttcac |
3808177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 33355346 - 33355288
Alignment:
Q |
167 |
aaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaat |
225 |
Q |
|
|
|||||||||| |||||||||||| |||| ||||||||| ||||||||||||||| |||| |
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|
T |
33355346 |
aaggacaaaacttaggtgcatttccttaggtgcttttcatgtggttcttcacatcaaat |
33355288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 30739746 - 30739659
Alignment:
Q |
127 |
taattgataacatttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttctt |
215 |
Q |
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|
|||||| | |||||||||||| || |||||| |||||||||||||||| | ||||||| |||||||||| | |||||||| | |||||| |
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|
T |
30739746 |
taattgctgacatttgtcatttaa-aaaatcatttattttaaggacaagacttaggtgtattttcttacatacttttcgtatagttctt |
30739659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 33422665 - 33422592
Alignment:
Q |
20 |
catccctaattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgat |
94 |
Q |
|
|
|||||||| ||||||||||||||||||||||| || ||||||||||||| || || ||||||| ||||||||| |
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|
T |
33422665 |
catccctatttactgctactattactattatttttccccttcataagtctactatta-tattatattcatttgat |
33422592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 25572845 - 25572914
Alignment:
Q |
200 |
ttttcgtgtggttcttcacatgaaattaactttgtggttatagaaaaatttgagaaaattatggatttga |
269 |
Q |
|
|
||||||||| ||||||||| | |||| |||||||||||||| ||| |||||||||||||||| ||||| |
|
|
T |
25572845 |
ttttcgtgttgttcttcacttaaaatacactttgtggttataacaaactttgagaaaattatggttttga |
25572914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 307
Target Start/End: Original strand, 1402927 - 1403061
Alignment:
Q |
178 |
ttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaattaacttt---gtggttatagaaaaatttgagaaaattatggatttga-taaa |
273 |
Q |
|
|
||||||| ||| |||| || |||||||||| ||||||||| | ||||| ||||| ||||||||| ||| |||||||||||||| ||||||| ||| |
|
|
T |
1402927 |
ttaggtgtgtttccttaggtacttttcgtgttgttcttcacttaaaatttacttttttgtggttataacaaattttgagaaaattatagatttgaggaaa |
1403026 |
T |
|
Q |
274 |
tcatggat-agttataagtatttcatgtaaagaac |
307 |
Q |
|
|
|||||| | |||||||| ||||||| || |||||| |
|
|
T |
1403027 |
tcatgggtaagttataaatatttcaagtgaagaac |
1403061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 20184258 - 20184291
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
20184258 |
tccttaggtgcttttcgtatgattcttaactaaa |
20184291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 54126525 - 54126657
Alignment:
Q |
181 |
ggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaatt-aactt-tgtggttatagaaaaatttgagaaaattatggatttgataaatcatg |
278 |
Q |
|
|
||||||||| |||| ||||||||| ||||||||||||||| ||||| ||||| |||| | ||| ||| ||| |||||||| ||||||||| ||||||| |
|
|
T |
54126525 |
ggtgcatttccttaggtgcttttcatgtggttcttcacataaaattgaacttctgtgctaataacaaactttaagaaaattgtggatttgagaaatcatt |
54126624 |
T |
|
Q |
279 |
gatagttataagtatttcatgtaaagaaccaca |
311 |
Q |
|
|
| ||||||| ||||||| |||| |||||||||| |
|
|
T |
54126625 |
ggtagttattagtattttatgtgaagaaccaca |
54126657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 54126694 - 54126638
Alignment:
Q |
169 |
ggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaat |
225 |
Q |
|
|
|||||||| |||||||||||| |||| ||| ||||||||||||||||||||| |||| |
|
|
T |
54126694 |
ggacaaaacttaggtgcatttccttaggtgtttttcgtgtggttcttcacataaaat |
54126638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 39850496 - 39850463
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
39850496 |
tccttaggtgcttttcgtatgattcttaactaaa |
39850463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 43639233 - 43639200
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
43639233 |
tccttaggtgcttttcgtatgattcttaactaaa |
43639200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 38341128 - 38341045
Alignment:
Q |
138 |
atttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcattttc-ttacgtgcttttcgtgtggttcttcacat |
220 |
Q |
|
|
||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||| |||| |||||||||| |||||||| |||| |
|
|
T |
38341128 |
atttgtcattaaaaaaaatcatttgttttaaggataaaatttaggtgcattttctttacatgcttttcgtatggttctttacat |
38341045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 44589559 - 44589484
Alignment:
Q |
19 |
tcatccctaattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgat |
94 |
Q |
|
|
||||||||||||||||||| | |||||||| ||||||| ||||||||||||| || |||||||||| |||| |||| |
|
|
T |
44589559 |
tcatccctaattactgctattgttactattcttgttttccttcataagtctaatattactattatattcatctgat |
44589484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 9626615 - 9626542
Alignment:
Q |
21 |
atccctaattactgctactattactattattgttttt--cttcataagtctattagtactattataatcatttg |
92 |
Q |
|
|
||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| || ||||||| ||||||| |
|
|
T |
9626615 |
atccctaattactgccactattactattattttttttcccttcataagtctattattaatattatattcatttg |
9626542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 9641179 - 9641097
Alignment:
Q |
138 |
atttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcatttt-cttacgtgcttttcgtgtggttcttcacat |
220 |
Q |
|
|
||||||||||||| ||| || ||||||||||||||||||||| | |||||||| ||||| || ||||| ||||||||||||||| |
|
|
T |
9641179 |
atttgtcattaaa-aaattcctttattttaaggacaaaattttgttgcattttccttacatgtttttcttgtggttcttcacat |
9641097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 43982081 - 43982154
Alignment:
Q |
20 |
catccctaattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgat |
94 |
Q |
|
|
|||| ||||||| |||| || ||||||||||| |||| |||||||||||||||| |||||||||| ||||||||| |
|
|
T |
43982081 |
catctctaattagtgctgctgttactattatt-ttttccttcataagtctattattactattatattcatttgat |
43982154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 9641308 - 9641229
Alignment:
Q |
20 |
catccctaattactgctactattactattattgttttt--cttcataagtctattagtactattataatcatttgatctt |
97 |
Q |
|
|
|||||||||||| ||||| ||||||||||||| ||||| |||||||||||||| | || ||||||| ||||||| |||| |
|
|
T |
9641308 |
catccctaattaatgctattattactattattttttttcccttcataagtctataattaatattatattcatttgttctt |
9641229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 46544050 - 46543977
Alignment:
Q |
159 |
tttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaattaacttt |
232 |
Q |
|
|
|||||||||| || |||||||||||| |||||||||| || ||| ||| || |||||||||| ||||| ||||| |
|
|
T |
46544050 |
tttattttaaagataaaatttaggtgtattttcttacatgttttccgtatgattcttcacataaaatttacttt |
46543977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 3017171 - 3017267
Alignment:
Q |
230 |
tttgtggttatagaaaaatttgagaaaattatggatttgataaatcatggatagttataagtatttcatgtaaagaaccacatcaaatgcatataag |
326 |
Q |
|
|
||||||||| || ||| ||| |||||||| ||||||||| |||| || | ||||||||||| ||| |||| ||||||||||| ||| |||| |||| |
|
|
T |
3017171 |
tttgtggttgtaacaaactttaagaaaattgtggatttgagaaataataggtagttataagtgttttatgtcaagaaccacatgaaaagcatttaag |
3017267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 9626487 - 9626408
Alignment:
Q |
138 |
atttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcatttt-cttacgtgcttttcgtgtggttcttca |
217 |
Q |
|
|
||||||||||||| || ||||| |||||||||||||||||| | |||||||| ||||| || ||||| |||||||||||| |
|
|
T |
9626487 |
atttgtcattaaaaaatttcttt-attttaaggacaaaattttgttgcattttccttacatgtttttcttgtggttcttca |
9626408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 36309836 - 36309891
Alignment:
Q |
18 |
gtcatccctaattactgctactattactattattgtttttcttcataagtctatta |
73 |
Q |
|
|
|||||| ||||||| | |||||||||||||||| |||| |||||||||||||||| |
|
|
T |
36309836 |
gtcatctctaattatttctactattactattatctttttccttcataagtctatta |
36309891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 38340908 - 38340967
Alignment:
Q |
166 |
taaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaat |
225 |
Q |
|
|
|||||| |||||||||||| ||||||||| |||| |||||||||| |||||||| |||| |
|
|
T |
38340908 |
taaggataaaatttaggtgtattttcttaaatgctattcgtgtggtacttcacataaaat |
38340967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 43982462 - 43982501
Alignment:
Q |
335 |
ttaggtgcttttcgtatgattcctaactaaactactcatg |
374 |
Q |
|
|
||||||||||||| |||||||||||| ||||||||||||| |
|
|
T |
43982462 |
ttaggtgcttttcatatgattcctaattaaactactcatg |
43982501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 42907221 - 42907059
Alignment:
Q |
127 |
taattgataacatttgtcattaaacaaaa-tcttttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaat |
225 |
Q |
|
|
|||||| ||| ||||||||||||| |||| || ||||||| ||| ||| || |||||| |||| |||| | ||| || ||||||| ||||| |||| |
|
|
T |
42907221 |
taattgttaaaatttgtcattaaagaaaaatcatttatttaaagaacacaaagtaggtgtatttctttacatatgttttgtatggttctccacataaaat |
42907122 |
T |
|
Q |
226 |
taac-tttgtggttatagaaaaatttgagaaaattatggatttgataaatcatggatagttat |
287 |
Q |
|
|
| || ||||| |||||| ||||||||| |||||||||||| ||| ||||||| | ||||||| |
|
|
T |
42907121 |
ttacctttgtagttataacaaaatttgaaaaaattatggatatgaaaaatcataggtagttat |
42907059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 45608103 - 45607983
Alignment:
Q |
143 |
tcattaaacaaaatcttttattttaaggac---aaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaattaac--tttgtggt |
237 |
Q |
|
|
|||||||| ||||||||||||||||||||| ||||| |||||| ||| ||||| | |||||||| |||||||||| || ||||||| ||| |||| |
|
|
T |
45608103 |
tcattaaa-aaaatcttttattttaaggacaaaaaaatgtaggtgtgtttccttacatacttttcgtatggttcttcatatagaattaaccttttatggt |
45608005 |
T |
|
Q |
238 |
tatagaaaaatttgagaaaatt |
259 |
Q |
|
|
|||| ||| ||||| |||||| |
|
|
T |
45608004 |
tataacaaactttgataaaatt |
45607983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 326
Target Start/End: Original strand, 26676666 - 26676865
Alignment:
Q |
134 |
taacatttgtcattaaacaaaatct-tttattttaaggacaaaatttaggtgcattttcttacgtgcttttc-gtgtggttcttcacatgaaattaactt |
231 |
Q |
|
|
|||||||||||||||| |||| | |||||||||||| ||||| |||||| |||| ||||| || |||| || ||||||||||||| ||||||| || |
|
|
T |
26676666 |
taacatttgtcattaaggaaaaattgtttattttaaggctaaaatgtaggtgtatttccttacatgtttttttgtatggttcttcacattaaattaattt |
26676765 |
T |
|
Q |
232 |
tgtg--gttatagaaaaatttgagaaaattatggatttgataaatcatg---gatagttataagtatttcatgtaaagaaccacatcaaatgcatataag |
326 |
Q |
|
|
| || |||||| ||| ||||| |||||||||||||||||||||||| | |||||| ||||||| |||| ||||||||||| ||| |||| |||| |
|
|
T |
26676766 |
tttgaggttataacaaactttgacaaaattatggatttgataaatcatcataggtagttaagagtattttatgtgaagaaccacatgaaaagcatttaag |
26676865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 16933043 - 16932989
Alignment:
Q |
35 |
ctactattactattattgtttttcttcataagtctattagtactattataatcat |
89 |
Q |
|
|
||||||||||||||||| |||| |||||||||||||||| |||| ||||| |||| |
|
|
T |
16933043 |
ctactattactattatttttttccttcataagtctattattactgttatattcat |
16932989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 29869963 - 29869902
Alignment:
Q |
248 |
tttgagaaaattatggatttgataaatcatggatagttataagtatttcatgtaaagaacca |
309 |
Q |
|
|
|||||||||||| ||||||||| ||||||| | ||||||| ||||||| |||| |||||||| |
|
|
T |
29869963 |
tttgagaaaattgtggatttgagaaatcattggtagttatgagtattttatgtcaagaacca |
29869902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 8210343 - 8210376
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
8210343 |
tccttaggtgcttttcgtatgattcttaactaaa |
8210376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27342524 - 27342467
Alignment:
Q |
127 |
taattgataacatttgtcattaaacaa-aatcttttattttaaggacaaaatttaggt |
183 |
Q |
|
|
|||||| ||||||||||||||||| || |||| ||||||||||||| ||||| ||||| |
|
|
T |
27342524 |
taattgctaacatttgtcattaaagaagaatcatttattttaaggataaaatgtaggt |
27342467 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 27343008 - 27342953
Alignment:
Q |
41 |
ttactattattgtttttcttcataagtctattagtac--tattataatcatttgat |
94 |
Q |
|
|
|||||||||||||||||||||||||||| | || ||| ||||||| ||||||||| |
|
|
T |
27343008 |
ttactattattgtttttcttcataagtcgactattactatattatactcatttgat |
27342953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 4088268 - 4088191
Alignment:
Q |
20 |
catccctaattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgatctt |
97 |
Q |
|
|
|||||||||||||| |||||||||||||||| ||| |||||||||||||| | |||||||||| | |||||||||| |
|
|
T |
4088268 |
catccctaattactcttactattactattattttttctcttcataagtctactgttactattatatttatttgatctt |
4088191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 287
Target Start/End: Original strand, 19089380 - 19089521
Alignment:
Q |
146 |
ttaaacaaaatcttttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaatt-aactttgtggttatagaa |
244 |
Q |
|
|
||||| |||| | |||||||| |||||||| |||||| ||||| ||||| || ||| | | ||||||||||||| ||||| | |||||||||||| || |
|
|
T |
19089380 |
ttaaaaaaaaacctttatttttaggacaaaccttaggtccatttccttacatgttttccatatggttcttcacataaaattcatttttgtggttata-aa |
19089478 |
T |
|
Q |
245 |
aaatttgagaaaattatggatttgataaatcatggatagttat |
287 |
Q |
|
|
|| |||||||||||| || |||||| |||| || | ||||||| |
|
|
T |
19089479 |
aagtttgagaaaattgtgaatttgagaaattataggtagttat |
19089521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19214182 - 19214247
Alignment:
Q |
18 |
gtcatccctaattactgctactattactattattgtttttcttcataagtctattagtactattat |
83 |
Q |
|
|
|||||||||||||| || |||| |||||||||||||||| |||||| |||||||| || |||||| |
|
|
T |
19214182 |
gtcatccctaattattgttacttttactattattgttttacttcatttgtctattattattattat |
19214247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 19214342 - 19214423
Alignment:
Q |
230 |
tttgtggttatagaaaaatttgagaaaattatggatttgataaatcatggatagttataagtatttcatgtaaagaaccaca |
311 |
Q |
|
|
|||||||||||| |||| ||| |||||||| || |||||| |||| || | ||||||||||||||| || | |||||||||| |
|
|
T |
19214342 |
tttgtggttataaaaaagtttaagaaaattgtgaatttgagaaataataggtagttataagtattttatatgaagaaccaca |
19214423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 30823232 - 30823180
Alignment:
Q |
173 |
aaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaat |
225 |
Q |
|
|
|||| ||||||||||||||||| ||||||||||||||| |||||||| |||| |
|
|
T |
30823232 |
aaaacttaggtgcattttcttaaatgcttttcgtgtggtacttcacataaaat |
30823180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 34188625 - 34188716
Alignment:
Q |
127 |
taattgataacatttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacat |
220 |
Q |
|
|
|||||| ||| |||||||| |||| ||| |||||||||| | |||||||||||||||||||| ||||| || |||| || || || ||||||| |
|
|
T |
34188625 |
taattgctaaaatttgtcactaaaaaaa--cttttatttttaagacaaaatttaggtgcatttccttacatgtttttggtatgatttttcacat |
34188716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 19089644 - 19089685
Alignment:
Q |
357 |
ctaactaaactactcatgtttttcatgaatccaccatattct |
398 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||| ||||||| |
|
|
T |
19089644 |
ctaactaaactactcatgattttcataaatccacaatattct |
19089685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 15940483 - 15940575
Alignment:
Q |
127 |
taattgataacatttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcatttt-cttacgtgcttttcgtgtggttcttcacat |
220 |
Q |
|
|
|||||| ||| ||||||||||||| ||||| ||||||||||| ||| || || |||||||||| ||||| ||||||| || ||||||||||||| |
|
|
T |
15940483 |
taattgctaatatttgtcattaaa--aaatcctttattttaagaacacaactttggtgcattttccttacatgctttttgtatggttcttcacat |
15940575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 11085351 - 11085419
Alignment:
Q |
26 |
taattactgctactattactattattgtttttcttcataagtctattagtactattataatcatttgat |
94 |
Q |
|
|
|||||| || ||||| |||||||||||||| ||||| ||| | ||||| |||||||||| ||||||||| |
|
|
T |
11085351 |
taattaatgttactactactattattgtttatcttcgtaaatatattattactattatattcatttgat |
11085419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 18034185 - 18034241
Alignment:
Q |
41 |
ttactattattgtttttcttcataagtctattagtactattataatcatttgatctt |
97 |
Q |
|
|
||||||||||| ||| ||||| ||||| ||||| |||||||||| |||||||||||| |
|
|
T |
18034185 |
ttactattattttttctcttcttaagtttattattactattatattcatttgatctt |
18034241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 18034286 - 18034350
Alignment:
Q |
127 |
taattgataacatttgtcattaaacaaaatcttttattttaaggacaaaatttaggtgcattttc |
191 |
Q |
|
|
|||||| ||| || ||| |||||| |||||| ||||||||||||| |||| |||||||||||||| |
|
|
T |
18034286 |
taattgttaatatgtgttattaaaaaaaatcctttattttaaggagaaaacttaggtgcattttc |
18034350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 22825702 - 22825762
Alignment:
Q |
252 |
agaaaattatggatttgataaatcatggatagttataagtatttcatgtaaagaaccacat |
312 |
Q |
|
|
|||||||||||||||| | ||||||| ||||||||| ||||||| |||| ||||| ||||| |
|
|
T |
22825702 |
agaaaattatggatttaaaaaatcattgatagttatgagtattttatgtgaagaatcacat |
22825762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 40442641 - 40442506
Alignment:
Q |
152 |
aaaatcttttattttaaggacaaaatttaggtgcattttct-tacgtgcttttcgtgtggttcttcacatgaaattaactttgtg--gttatagaaaaat |
248 |
Q |
|
|
|||| ||||||| || ||| |||| ||||||||||||| || ||| | ||||||| ||||||||||||| ||||| | |||||| |||||| ||||| |
|
|
T |
40442641 |
aaaaacttttatctttaggccaaattttaggtgcatttcctgtacatatttttcgtatggttcttcacataaaattcattttgtgtggttataacaaaat |
40442542 |
T |
|
Q |
249 |
ttgagaaaattatggatttgataaatcatggatagt |
284 |
Q |
|
|
||||||||| | || |||||| |||| || |||||| |
|
|
T |
40442541 |
ttgagaaaaatgtgaatttgagaaattatagatagt |
40442506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 40503798 - 40503663
Alignment:
Q |
152 |
aaaatcttttattttaaggacaaaatttaggtgcattttct-tacgtgcttttcgtgtggttcttcacatgaaattaactttgtg--gttatagaaaaat |
248 |
Q |
|
|
|||| ||||||| || ||| |||| ||||||||||||| || ||| | |||||| ||||||||||||| ||||| | |||||| |||||| ||||| |
|
|
T |
40503798 |
aaaaacttttatctttaggccaaattttaggtgcatttcctatacatatttttcgcatggttcttcacataaaattcattttgtgtggttataacaaaat |
40503699 |
T |
|
Q |
249 |
ttgagaaaattatggatttgataaatcatggatagt |
284 |
Q |
|
|
||||||||| | ||||||||| |||| || |||||| |
|
|
T |
40503698 |
ttgagaaaaatgtggatttgagaaattatagatagt |
40503663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 2818686 - 2818719
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
2818686 |
tccttaggtgcttttcgtatgattcttaactaaa |
2818719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 7737216 - 7737183
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
7737216 |
tccttaggtgcttttcgtatgattcttaactaaa |
7737183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 20893036 - 20893003
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
20893036 |
tccttaggtgcttttcgtatgattcttaactaaa |
20893003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 9933742 - 9933694
Alignment:
Q |
167 |
aaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttctt |
215 |
Q |
|
|
||||| ||||||||||| || ||||||| ||||||||||| |||||||| |
|
|
T |
9933742 |
aaggagaaaatttaggtacaatttcttaggtgcttttcgtatggttctt |
9933694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 18034513 - 18034461
Alignment:
Q |
173 |
aaaatttaggtgcattttcttacgtgcttttcgtgtggttcttcacatgaaat |
225 |
Q |
|
|
|||| ||||||||||||||||| | ||||||||||||| |||||||| |||| |
|
|
T |
18034513 |
aaaacttaggtgcattttcttaaatacttttcgtgtggtacttcacataaaat |
18034461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 25795005 - 25794935
Alignment:
Q |
153 |
aaatcttttattttaaggacaaaatttaggtgcatttt-cttacgtgcttttcgtgtggttcttcacatga |
222 |
Q |
|
|
||||| |||||||||||||||||| |||||| ||||| ||||| |||||||||| | ||||||||||||| |
|
|
T |
25795005 |
aaatcatttattttaaggacaaaacttaggttaatttttcttacatgcttttcgtatagttcttcacatga |
25794935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 20476612 - 20476556
Alignment:
Q |
159 |
tttattttaaggacaaaatttaggtgcattttcttacgtgcttttcgtgtggttctt |
215 |
Q |
|
|
||||||||||||| |||| |||||| || || |||| ||||||||||| |||||||| |
|
|
T |
20476612 |
tttattttaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttctt |
20476556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 14393581 - 14393614
Alignment:
Q |
332 |
tccttaggtgcttttcgtatgattcctaactaaa |
365 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
14393581 |
tccttaggtgcttttcgtatgattcttaactaaa |
14393614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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