View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_high_74 (Length: 259)
Name: NF2071_high_74
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_high_74 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 32969499 - 32969267
Alignment:
| Q |
1 |
ataaattccctctatgcataaacttcagatattcacaagcagttttgctgagccaaatgtgctcaaaagcatatacatttcaagtctacaagagatgcat |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
32969499 |
ataaattccctctatgcataaacttcagatattcacaagcagttttgctgagccaaatgtgctcaaaagcatatacatttcaagtctacaagagatgcct |
32969400 |
T |
|
| Q |
101 |
agtgcta-tcggaatatatacaatgattactttatatacaatctctattctattctagtttgatgctgcttctatttaacttgtgatgttttcttgtggt |
199 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32969399 |
agtgctaatcggaatatatacaatgataactttatatacaatctctattctattctagtttgatgctgcttctatttaacttgtgatgttttcttgtggt |
32969300 |
T |
|
| Q |
200 |
aatgatttattagcactctgtcacaagtgtatg |
232 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
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|
| T |
32969299 |
aatgatttattagcactctgtcacaagtgtatg |
32969267 |
T |
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