View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2071_low_14 (Length: 539)

Name: NF2071_low_14
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2071_low_14
NF2071_low_14
[»] chr4 (26 HSPs)
chr4 (1-240)||(31083315-31083562)
chr4 (365-523)||(20068731-20068889)
chr4 (365-523)||(31083030-31083189)
chr4 (149-243)||(20068518-20068612)
chr4 (114-243)||(20069515-20069642)
chr4 (114-219)||(31082219-31082323)
chr4 (114-193)||(3018045-3018125)
chr4 (114-193)||(9516875-9516954)
chr4 (114-193)||(9619014-9619093)
chr4 (122-193)||(36887722-36887793)
chr4 (114-193)||(46046689-46046768)
chr4 (135-193)||(37012762-37012820)
chr4 (116-189)||(9396968-9397040)
chr4 (138-191)||(12904804-12904857)
chr4 (114-193)||(9396733-9396812)
chr4 (114-193)||(9516644-9516723)
chr4 (114-193)||(26252502-26252581)
chr4 (114-193)||(31090326-31090405)
chr4 (114-193)||(34064016-34064095)
chr4 (114-193)||(38574233-38574312)
chr4 (114-193)||(43313477-43313555)
chr4 (144-193)||(26252332-26252381)
chr4 (114-191)||(35376197-35376273)
chr4 (114-190)||(7819049-7819124)
chr4 (137-193)||(31090118-31090174)
chr4 (121-193)||(48579907-48579979)
[»] chr7 (29 HSPs)
chr7 (114-193)||(20419570-20419649)
chr7 (114-239)||(14800875-14801000)
chr7 (114-239)||(15247867-15247992)
chr7 (114-193)||(28218212-28218292)
chr7 (114-193)||(28218428-28218507)
chr7 (114-193)||(41600223-41600302)
chr7 (118-243)||(33131671-33131796)
chr7 (114-193)||(20419801-20419881)
chr7 (114-193)||(12006805-12006884)
chr7 (114-193)||(20458726-20458804)
chr7 (115-193)||(23383534-23383613)
chr7 (114-193)||(23704926-23705004)
chr7 (138-193)||(38879989-38880044)
chr7 (114-239)||(14646868-14646994)
chr7 (114-192)||(20963760-20963837)
chr7 (115-193)||(25772596-25772674)
chr7 (119-193)||(33133402-33133475)
chr7 (114-193)||(44816867-44816948)
chr7 (114-193)||(1250471-1250550)
chr7 (114-193)||(12006575-12006653)
chr7 (138-193)||(16995257-16995312)
chr7 (114-193)||(23258190-23258268)
chr7 (114-193)||(23704696-23704774)
chr7 (114-193)||(24195061-24195140)
chr7 (114-193)||(48672544-48672623)
chr7 (135-193)||(20458956-20459014)
chr7 (114-191)||(7658236-7658309)
chr7 (137-193)||(20963552-20963608)
chr7 (137-193)||(38879781-38879837)
[»] chr3 (29 HSPs)
chr3 (114-193)||(16722025-16722104)
chr3 (114-193)||(9267009-9267088)
chr3 (114-193)||(14262070-14262149)
chr3 (114-193)||(43572423-43572502)
chr3 (118-187)||(3424812-3424882)
chr3 (115-191)||(45969950-45970026)
chr3 (114-193)||(19113030-19113109)
chr3 (114-193)||(20853961-20854039)
chr3 (110-192)||(11003762-11003844)
chr3 (114-192)||(14171852-14171930)
chr3 (136-193)||(21633161-21633218)
chr3 (144-193)||(38283815-38283864)
chr3 (116-193)||(43572656-43572732)
chr3 (115-191)||(49986562-49986639)
chr3 (114-193)||(19112798-19112878)
chr3 (137-193)||(20853753-20853809)
chr3 (114-193)||(30500077-30500154)
chr3 (114-193)||(3425914-3425992)
chr3 (114-193)||(5800639-5800718)
chr3 (114-193)||(14162136-14162214)
chr3 (114-193)||(14262301-14262380)
chr3 (114-193)||(30500306-30500384)
chr3 (114-193)||(38283584-38283663)
chr3 (114-180)||(19720367-19720433)
chr3 (114-243)||(35740851-35740978)
chr3 (148-193)||(35995746-35995791)
chr3 (137-193)||(15328725-15328781)
chr3 (115-191)||(32997242-32997317)
chr3 (115-190)||(45970183-45970259)
[»] chr1 (23 HSPs)
chr1 (114-193)||(17500803-17500882)
chr1 (114-193)||(18462320-18462398)
chr1 (115-193)||(24467892-24467970)
chr1 (121-182)||(26266456-26266517)
chr1 (121-180)||(26271163-26271222)
chr1 (114-193)||(33628955-33629034)
chr1 (114-239)||(43400787-43400912)
chr1 (114-193)||(4907227-4907306)
chr1 (114-193)||(29696823-29696901)
chr1 (114-193)||(52058045-52058124)
chr1 (135-193)||(30299496-30299554)
chr1 (114-192)||(39826312-39826390)
chr1 (114-193)||(17606573-17606650)
chr1 (114-193)||(39970910-39970990)
chr1 (138-193)||(24467686-24467741)
chr1 (114-193)||(27039672-27039750)
chr1 (114-193)||(33628724-33628803)
chr1 (114-193)||(39711107-39711185)
chr1 (114-193)||(39711337-39711416)
chr1 (114-193)||(39826084-39826163)
chr1 (137-193)||(8293072-8293128)
chr1 (135-191)||(30299286-30299342)
chr1 (114-190)||(34749373-34749449)
[»] chr5 (23 HSPs)
chr5 (148-193)||(32233967-32234012)
chr5 (114-193)||(7125952-7126030)
chr5 (114-193)||(7126182-7126261)
chr5 (114-193)||(17762547-17762626)
chr5 (114-193)||(18336721-18336800)
chr5 (114-193)||(23979166-23979245)
chr5 (114-193)||(31799674-31799753)
chr5 (114-193)||(41001618-41001696)
chr5 (124-191)||(6817388-6817455)
chr5 (114-193)||(14144166-14144245)
chr5 (114-193)||(24837203-24837282)
chr5 (114-193)||(41424550-41424629)
chr5 (144-193)||(27159222-27159271)
chr5 (114-190)||(14143936-14144011)
chr5 (114-193)||(14411931-14412009)
chr5 (114-193)||(17762317-17762395)
chr5 (114-193)||(24074337-24074416)
chr5 (114-193)||(24074567-24074646)
chr5 (114-193)||(24650964-24651043)
chr5 (114-193)||(29445071-29445149)
chr5 (115-193)||(6817158-6817235)
chr5 (137-193)||(4919047-4919103)
chr5 (114-181)||(18336501-18336569)
[»] chr8 (19 HSPs)
chr8 (114-193)||(21147970-21148050)
chr8 (114-193)||(5554903-5554982)
chr8 (114-193)||(5555134-5555213)
chr8 (114-193)||(10108404-10108483)
chr8 (114-193)||(14820559-14820638)
chr8 (116-193)||(10108635-10108712)
chr8 (116-192)||(30789773-30789849)
chr8 (114-193)||(10171408-10171487)
chr8 (114-188)||(26136719-26136793)
chr8 (118-192)||(39889628-39889702)
chr8 (135-243)||(28977674-28977782)
chr8 (138-181)||(39888538-39888582)
chr8 (114-193)||(14820329-14820407)
chr8 (114-193)||(43851699-43851777)
chr8 (115-193)||(21148201-21148279)
chr8 (139-193)||(26136950-26137004)
chr8 (114-191)||(43481581-43481659)
chr8 (137-190)||(2583588-2583641)
chr8 (137-193)||(14767564-14767620)
[»] scaffold0141 (1 HSPs)
scaffold0141 (114-193)||(8587-8666)
[»] scaffold0117 (1 HSPs)
scaffold0117 (114-192)||(12248-12326)
[»] chr2 (20 HSPs)
chr2 (114-192)||(30958718-30958795)
chr2 (116-192)||(20499011-20499087)
chr2 (114-182)||(23046741-23046809)
chr2 (114-193)||(23806217-23806296)
chr2 (114-193)||(26135851-26135930)
chr2 (138-193)||(26236360-26236415)
chr2 (114-193)||(22263456-22263537)
chr2 (115-193)||(23854931-23855008)
chr2 (114-193)||(17463126-17463204)
chr2 (114-193)||(17463356-17463435)
chr2 (114-193)||(19251505-19251583)
chr2 (114-189)||(23854722-23854797)
chr2 (114-193)||(30390493-30390572)
chr2 (139-193)||(15106332-15106386)
chr2 (114-191)||(26560821-26560899)
chr2 (148-193)||(17850851-17850896)
chr2 (114-219)||(20498781-20498884)
chr2 (114-187)||(21481035-21481108)
chr2 (148-193)||(21482145-21482190)
chr2 (114-182)||(44098898-44098966)
[»] chr6 (7 HSPs)
chr6 (114-190)||(9154914-9154990)
chr6 (114-193)||(32017769-32017847)
chr6 (114-193)||(9481216-9481295)
chr6 (114-193)||(19284163-19284242)
chr6 (114-192)||(21069548-21069627)
chr6 (135-193)||(9481447-9481505)
chr6 (137-193)||(24731995-24732051)
[»] scaffold0449 (1 HSPs)
scaffold0449 (114-191)||(7466-7544)
[»] scaffold0881 (1 HSPs)
scaffold0881 (114-193)||(253-333)
[»] scaffold0361 (1 HSPs)
scaffold0361 (114-193)||(4596-4676)
[»] scaffold0477 (1 HSPs)
scaffold0477 (114-193)||(5013-5091)
[»] scaffold0185 (1 HSPs)
scaffold0185 (114-191)||(3903-3980)


Alignment Details
Target: chr4 (Bit Score: 170; Significance: 5e-91; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 31083562 - 31083315
Alignment:
Q  1 ccaaattcgcttattttgcggattatatatttgttcctttaagtaaagaagataatgtcttcaaatttaaagttgttatttttctttgg-taaatgcccc 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  31083562 ccaaattcgtttattttgcggattatatatttgttcctttaagtaaagaagataatgtcttcaaatttaaagttgttatttttctttgggtaaatgtccc 31083463  T
Q  100 ttttcgtccctt-------accgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||        | |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31083462 ttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattcttccacttttggtcc 31083363  T
Q  193 cgtgttgtaacaagtcagtagaatctgttgacgtgtcatgctgactgt 240  Q
    || ||||||||| ||||| |||||||||||||||||||||||||||||    
T  31083362 cgcgttgtaacaggtcagcagaatctgttgacgtgtcatgctgactgt 31083315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 365 - 523
Target Start/End: Original strand, 20068731 - 20068889
Alignment:
Q  365 ctccatctgcatctttcttattttgtcattaaagcttcatcttcttcatgaccaagttcatcccctggacaacccatatgcctaccgcaccctctacctc 464  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20068731 ctccatctgcatctttcttattttgttcttaaagcttcatcttcttcatgaccaagttcatcccctggacaacccatatgcctaccgcaccctctacctc 20068830  T
Q  465 aacaaccagaaacactcaaatctcttaatcccaaatctctaaacccagacaaacttcct 523  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20068831 aacaaccagaaacactcaaatctcttaattccaaatctctaaacccagacaaacttcct 20068889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 365 - 523
Target Start/End: Complemental strand, 31083189 - 31083030
Alignment:
Q  365 ctccatctgcatctttcttattttgtcattaaagcttcatcttcttcatgaccaagttc-atcccctggacaacccatatgcctaccgcaccctctacct 463  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31083189 ctccatctgcatctttcttattttgttcttaaagcttcatcttcttcatgaccaagttctatcccctggacaacccatatgcctaccgcaccctctacct 31083090  T
Q  464 caacaaccagaaacactcaaatctcttaatcccaaatctctaaacccagacaaacttcct 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31083089 caacaaccagaaacactcaaatctcttaatcccaaatctctaaacccagacaaacttcct 31083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 20068518 - 20068612
Alignment:
Q  149 ttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtagaatctgttgacgtgtcatgctgactgtgta 243  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  20068518 ttagattttgtccctatcatttgtgattcttccacttttggtccctcgttgtaacaggtcagcagaatctgttgacgtgtcatgctgactgtgta 20068612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 20069642 - 20069515
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||||| ||||||||| | ||||||||  || |||||||| |||||||||||||||||||||||||| |||||||| |   ||| |||| ||||| ||    
T  20069642 cgaattccagttttggtccctgtaaaaaa--aagtttagattatgtccctatcatttgagattcttccacttttggtctctcattgaaacatgtcagcag 20069545  T
Q  214 aatctgttgacgtgtcatgctgactgtgta 243  Q
    |||||| | |||||||  ||| ||||||||    
T  20069544 aatctgcttacgtgtctagctaactgtgta 20069515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 31082219 - 31082323
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||||| | ||||||| | |||||||| ||| |||||||| |||||||||||||||||||||||||| |||||| |||   ||| |||| ||||| ||    
T  31082219 cgaattccaggtttggtccctgtaaaaaa-aaagtttagattctgtccctatcatttgagattcttccacttttggcccctcattgaaacatgtcagcag 31082317  T
Q  214 aatctg 219  Q
    ||||||    
T  31082318 aatctg 31082323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 3018045 - 3018125
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  3018045 cgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 3018125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 9516954 - 9516875
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||||| |||||||| || ||||||||||||||||| | |||| ||||||||| | ||||||||||    
T  9516954 cgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtccc 9516875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9619014 - 9619093
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||  || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  9619014 cgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 9619093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 36887722 - 36887793
Alignment:
Q  122 ggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||| | |||||||| ||| ||||||||   |||||||||||||||||||||||| ||||||||||    
T  36887722 ggttttagtccctgtaaaaaaaaaagtttagattccatccctatcatttgagattcttccacttttggtccc 36887793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 46046768 - 46046689
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| ||||| ||||    
T  46046768 cgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttgatccc 46046689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 37012762 - 37012820
Alignment:
Q  135 gtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  37012762 gtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 37012820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 9397040 - 9396968
Alignment:
Q  116 aattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttgg 189  Q
    |||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||    
T  9397040 aattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcagattcttccacttttgg 9396968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 12904804 - 12904857
Alignment:
Q  138 aaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    ||||| |||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  12904804 aaaaaaaaaatttagattttgtccttataatttcagattcttccacttttggtc 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9396733 - 9396812
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || |||| ||||| || ||||| || ||||||||||||||||||| |||| | ||| ||||| ||||||||||    
T  9396733 cgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttccacttttggtccc 9396812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9516644 - 9516723
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| |||   |||||||| || ||||||||||||||| | | |||| | ||||||||| ||||||||||    
T  9516644 cgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccc 9516723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 26252581 - 26252502
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| ||||| ||  | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  26252581 cgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 31090405 - 31090326
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || |||| ||| | |||||||| |||| ||||||||||||||| | |||| ||||||||| | ||||||||||    
T  31090405 cgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattcttctacttttggtccc 31090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 34064016 - 34064095
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||  ||||| ||| | |||||||| || |||||||||||||| || | |||| ||||||||||| ||||||||||    
T  34064016 cgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttccacttttggtccc 34064095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 38574312 - 38574233
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| |||||| ||| | ||||| || || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  38574312 cgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 38574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 43313555 - 43313477
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| |||||| ||| | |||||||| ||| ||||||||   ||||||||||||| |||||||||| ||||||||||    
T  43313555 cgaattctggttttagtccctgtaaaaaa-aaagtttagattccatccctatcatttgtgattcttccacttttggtccc 43313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 26252332 - 26252381
Alignment:
Q  144 aaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||| ||||||||||||||| | |||| ||||||||||| ||||||||||    
T  26252332 aaaaattagattttgtccctgtaatttcagattcttccacttttggtccc 26252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 35376197 - 35376273
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    ||||||| |||||| ||| | |||||||| || |||||||||||||| || | |||| ||||||||||| ||||||||    
T  35376197 cgaattctggttttagtccctgtaaaaaa-aagatttagattttgtctctgtaattttagattcttccacttttggtc 35376273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 7819049 - 7819124
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggt 190  Q
    |||||||||||||| |||  | |||| || || ||||||||||||||||| | |||| ||||||||||| |||||||    
T  7819049 cgaattccggttttagtcatg-taaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggt 7819124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 31090118 - 31090174
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  31090118 aaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 31090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 48579907 - 48579979
Alignment:
Q  121 cggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| ||||  |||||||| || |||||||||||||| || | |||| |||||||| || ||||||||||    
T  48579907 cggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaattttggtccc 48579979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 20419570 - 20419649
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||||||||||||||    
T  20419570 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccatttttggtccc 20419649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 14801000 - 14800875
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||| ||||||| ||| | |||||||| ||| |||||||||||||||| |||||| |||||||||||   |||||| |    |  ||| |||||| ||    
T  14801000 cgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattcttccacaattggtctctcacttgaactagtcagcag 14800901  T
Q  214 aatctgttgacgtgtcatgctgactg 239  Q
    |||||| |||||||||||||||||||    
T  14800900 aatctgctgacgtgtcatgctgactg 14800875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 15247992 - 15247867
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||| ||||||| ||| | |||||||| ||| |||||||||||||||| |||||| |||||||||||   |||||| |    |  ||| |||||| ||    
T  15247992 cgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattcttccacaattggtctctcacttgaactagtcagcag 15247893  T
Q  214 aatctgttgacgtgtcatgctgactg 239  Q
    |||||| |||||||||||||||||||    
T  15247892 aatctgctgacgtgtcatgctgactg 15247867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 28218212 - 28218292
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| ||| ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  28218212 cgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 28218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 28218507 - 28218428
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  28218507 cgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 28218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 41600302 - 41600223
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  41600302 cgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 41600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 33131671 - 33131796
Alignment:
Q  118 ttccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtagaatc 217  Q
    |||||||||| ||| | ||||| || |||||||||||| |||||||||||||| ||||||||||  ||||| ||||    |  ||| |||||| ||||||    
T  33131671 ttccggttttagtccctgtaaataaaaaaatttagattctgtccctatcatttcagattcttccgcttttgctccctcacttaaactagtcagcagaatc 33131770  T
Q  218 tgttgacgtgtcatgctgactgtgta 243  Q
    || ||||||||| | |||| ||||||    
T  33131771 tgctgacgtgtcctactgattgtgta 33131796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 20419881 - 20419801
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| ||| ||||||||||||||||| | |||| ||||||||| | ||||||||||    
T  20419881 cgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtccc 20419801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 12006884 - 12006805
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| |||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  12006884 cgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 12006805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 20458726 - 20458804
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | ||||| || ||||||||||||||||| || | |||| ||||||||||| ||||||||||    
T  20458726 cgaattccggttttagtccctgtaaataa-aaaatttagattttgtcgctgtaatttcagattcttccacttttggtccc 20458804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 23383534 - 23383613
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||| ||| |  ||||||| ||| ||||||||||||||||||| |||| | |||||||||||||| |||||    
T  23383534 gaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattcttccattttttgtccc 23383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 23705004 - 23704926
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  23705004 cgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattcttccacttttggtccc 23704926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 38880044 - 38879989
Alignment:
Q  138 aaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||| |||||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  38880044 aaaaaaaaaatttagattttgtccctgtaatttcagattcttccacttttggtccc 38879989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 14646994 - 14646868
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaa-tttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagta 212  Q
    |||||||||||||| ||| | |||||||| |||| |||||||| | ||||| |||||| |||||||||||   | ||||||    |  ||| |||||| |    
T  14646994 cgaattccggttttagtccctgtaaaaaaaaaaagtttagattctatccctgtcatttcagattcttccacaatcggtccctcacttgaactagtcagca 14646895  T
Q  213 gaatctgttgacgtgtcatgctgactg 239  Q
    ||||||| |||||||||||||||||||    
T  14646894 gaatctgctgacgtgtcatgctgactg 14646868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 20963837 - 20963760
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||||| ||| | ||||||| |||||||||||||| |||||| | |||| |||||||| || |||||||||    
T  20963837 cgaattccggttttagtccctgtaaaaa-taaaatttagatttagtccctgtaatttcagattctttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 25772674 - 25772596
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| ||||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||| | ||||||||||    
T  25772674 gaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtccc 25772596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 33133475 - 33133402
Alignment:
Q  119 tccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| ||| | |||||||| ||| |||||||  |||||||||||||||||||||||||  ||||||||||    
T  33133475 tccggttttagtccctgtaaaaaa-aaagtttagatcatgtccctatcatttgagattcttccgcttttggtccc 33133402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 44816867 - 44816948
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaa--tttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||||| |||||||| ||||  ||| |||||||||||| | |||| ||||||||||| ||||||||||    
T  44816867 cgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagattcttccacttttggtccc 44816948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 1250550 - 1250471
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| ||||| ||||| |||||  | || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  1250550 cgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccacttttggtccc 1250471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 12006575 - 12006653
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| |||| ||| | |||||||| |||||| ||||||||||||| | |||| ||||||||||| ||||| ||||    
T  12006575 cgaattccgattttagtccctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattcttccacttttgatccc 12006653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 16995257 - 16995312
Alignment:
Q  138 aaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  16995257 aaaaaaaatatttagattttgtccctgtaatttcagattcttccacttttggtccc 16995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 23258268 - 23258190
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||||||| | |||||||| ||| ||||||||    ||||| ||||||||||||||||| ||||| ||||    
T  23258268 cgaattccggttttggtccctgtaaaaaa-aaagtttagattccaaccctaacatttgagattcttccacttttgatccc 23258190  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 23704696 - 23704774
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||||  || | |||||||| || ||||| ||||||||||| | |||| ||||||||||| ||||||||||    
T  23704696 cgaattccggttttactcactgtaaaaaa-aagatttacattttgtccctgtaatttcagattcttccacttttggtccc 23704774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 24195140 - 24195061
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||| ||||||||| ||| | |||||||| || ||||||||||||||| | | |||| | ||||||||| ||||||||||    
T  24195140 cgaaatccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccc 24195061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 48672623 - 48672544
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | ||||| || || ||||||||||| ||||| | |||| ||||||||||| ||||||||||    
T  48672623 cgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattcttccacttttggtccc 48672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 20459014 - 20458956
Alignment:
Q  135 gtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| || |||||||||||||| || | |||| ||||||||||| ||||||||||    
T  20459014 gtaaaaaaaaagatttagattttgtcactgtaatttcagattcttccacttttggtccc 20458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 7658309 - 7658236
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    |||||| ||||||| ||||| |||||||| ||||    |||||||||||| | |||| ||||||||||| ||||||||    
T  7658309 cgaatttcggttttagtctctgtaaaaaaaaaaa----gattttgtccctgtaatttaagattcttccacttttggtc 7658236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 20963552 - 20963608
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || |||||||||| |||||| | |||| ||||||||||| ||||||||||    
T  20963552 aaaaaaaaagatttagatttagtccctgtaattttagattcttccacttttggtccc 20963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 38879781 - 38879837
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  38879781 aaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 38879837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 16722025 - 16722104
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| |||||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  16722025 cgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattcttccacttttggtccc 16722104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9267009 - 9267088
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  9267009 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 9267088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 14262070 - 14262149
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| |||   |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  14262070 cgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccacttttggtccc 14262149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 43572423 - 43572502
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||  |||||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  43572423 cgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattcttccacttttggtccc 43572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 3424812 - 3424882
Alignment:
Q  118 ttccggttttggtctcggtaaaaaataaaa-tttagattttgtccctatcatttgagattcttccattttt 187  Q
    |||||||||||||| | |||||||| |||| |||||||||  |||||||||||||||||||||||| ||||    
T  3424812 ttccggttttggtccctgtaaaaaaaaaaagtttagatttcatccctatcatttgagattcttccactttt 3424882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 45969950 - 45970026
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    ||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| |||||||| || ||||||||    
T  45969950 gaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctttcacttttggtc 45970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 19113109 - 19113030
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||| ||||| | |||| ||||||||| | ||||||||||    
T  19113109 cgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattcttctacttttggtccc 19113030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 20854039 - 20853961
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  20854039 cgaatttcggttttagtc-ctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 20853961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 11003762 - 11003844
Alignment:
Q  110 ttaccgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||||||||| ||| | ||||| || || | ||||||||||||| | | |||| ||||||||||| |||||||||    
T  11003762 ttaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattcttccacttttggtcc 11003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 14171930 - 14171852
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||||| ||| | ||||| || || ||||||||||||||||| | ||||  |||||||||| |||||||||    
T  14171930 cgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattcttccacttttggtcc 14171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 21633218 - 21633161
Alignment:
Q  136 taaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  21633218 taaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 21633161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 38283864 - 38283815
Alignment:
Q  144 aaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||| ||||    
T  38283864 aaaatttagattttgtccctataatttcagattcttccacttttgatccc 38283815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 43572732 - 43572656
Alignment:
Q  116 aattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||| ||  | |||||||| |||||||||||| ||||||| | |||| ||||||||||| ||||||||||    
T  43572732 aattccggttttagttcctgtaaaaaa-aaaatttagattctgtccctgtaatttcagattcttccacttttggtccc 43572656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 49986562 - 49986639
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    ||||||||||||| ||| | |||||||| ||| ||||||||||||||||| | |||| ||||||||| | ||||||||    
T  49986562 gaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtc 49986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 19112798 - 19112878
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| ||| |||||||||||||||||   |||| | ||||||||| ||||||||||    
T  19112798 cgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattcttccacttttggtccc 19112878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 20853753 - 20853809
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  20853753 aaaaaaaaagatttagattttgtccctataatttcatattcttccacttttggtccc 20853809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 30500077 - 30500154
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | ||||||||  ||||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  30500077 cgaatttcggttttagtccctgtaaaaaa--aaatttagattttgtccctgtaatttcatattcttccacttttggtccc 30500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 3425992 - 3425914
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| |  ||||||| |||||| |||||   ||| |||||||||||||||||||| ||||||||||    
T  3425992 cgaattccggttttagtcccaataaaaaaaaaaatt-agattccatccttatcatttgagattcttccacttttggtccc 3425914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 5800639 - 5800718
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| |  ||||||||| ||||||| | |||| | ||||||||||||||||||||    
T  5800639 cgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttccatttttggtccc 5800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 14162214 - 14162136
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| | | |||||||||||||| | | |||| ||||||||||| ||||||||||    
T  14162214 cgaattccggttttagtccctgtaaaaaagaga-tttagattttgtccttgtaatttcagattcttccacttttggtccc 14162136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 14262380 - 14262301
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||| ||||| |||| |||||    
T  14262380 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgttccacttttagtccc 14262301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 30500384 - 30500306
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| ||||| ||| | |||||||| |||||||||||||||||||| | |||| | ||| ||||| ||||||||||    
T  30500384 cgaattccagttttagtccctgtaaaaaa-aaaatttagattttgtccctgtaatttcatattgttccacttttggtccc 30500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 38283584 - 38283663
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| |||   |||||||| |||||||||||||||| ||||| |||| | ||| ||||| ||||| ||||    
T  38283584 cgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttccacttttgatccc 38283663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 19720367 - 19720433
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttc 180  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | |||||||    
T  19720367 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 35740851 - 35740978
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||||||||||| ||| | ||||||||  || |||||||||||||||| | |||| | ||||||||| |||| |||||    |  ||||  |||| ||    
T  35740851 cgaattccggttttagtccccgtaaaaaa--aagtttagattttgtccctgtaattttaaattcttccacttttagtccctcaataaaacacatcagcag 35740948  T
Q  214 aatctgttgacgtgtcatgctgactgtgta 243  Q
    |||||| |||| ||||||| ||||||||||    
T  35740949 aatctgctgacatgtcatgatgactgtgta 35740978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 35995746 - 35995791
Alignment:
Q  148 tttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||||    
T  35995746 tttagattttgtccctgtaatttcagattcttccacttttggtccc 35995791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 15328781 - 15328725
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||| | |||| ||||| ||||| ||||||||||    
T  15328781 aaaaaaaaagatttagattttgtccctgtaatttcagatttttccacttttggtccc 15328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 32997242 - 32997317
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    ||||||||||||| ||| | |||||||| ||| ||||||||   ||| |||||||| ||||||||||| ||||||||    
T  32997242 gaattccggttttagtccctgtaaaaaa-aaagtttagattccatccatatcatttaagattcttccacttttggtc 32997317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 45970259 - 45970183
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggt 190  Q
    ||||| ||||||| ||| | |||||||| ||| ||||| ||||||||||| | |||| ||||||||||| |||||||    
T  45970259 gaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattcttccacttttggt 45970183  T

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Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 17500803 - 17500882
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||||| |||||||| ||| ||||||||   |||||||||||||||||| ||||| ||||||||||    
T  17500803 cgaattccggttttagtctctgtaaaaaaaaaagtttagattccatccctatcatttgagattattccacttttggtccc 17500882  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 18462320 - 18462398
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  18462320 cgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcagattcttccatttttggtccc 18462398  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 24467970 - 24467892
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  24467970 gaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 24467892  T

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Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 26266456 - 26266517
Alignment:
Q  121 cggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttcca 182  Q
    ||||||| ||||| |||||||| || ||||||||| ||||||||||||||||||||||||||    
T  26266456 cggtttttgtctctgtaaaaaaaaatatttagattctgtccctatcatttgagattcttcca 26266517  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 26271222 - 26271163
Alignment:
Q  121 cggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttc 180  Q
    ||||||||||| | |||||||| || ||||||||| ||||||||||||||||||||||||    
T  26271222 cggttttggtccctgtaaaaaaaaacatttagattctgtccctatcatttgagattcttc 26271163  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 33629034 - 33628955
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| |||| || |||||||||||| | |||| ||||||||||| ||||||||||    
T  33629034 cgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattcttccacttttggtccc 33628955  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 43400787 - 43400912
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||||||||||||||| | |||||||| ||| |||||||| ||||||||  || | ||||||||||| |  |||||||    |  | |  ||||| ||    
T  43400787 cgaattccggttttggtccctgtaaaaaaaaaagtttagattctgtccctacaatataagattcttccactactggtccctcacttaaccttgtcagcag 43400886  T
Q  214 aatctgttgacgtgtcatgctgactg 239  Q
    ||||||||||||||||||||||||||    
T  43400887 aatctgttgacgtgtcatgctgactg 43400912  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 4907306 - 4907227
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| ||||| ||| | |||||| | || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  4907306 cgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 4907227  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 29696901 - 29696823
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| |||||| ||||||||||| | | |||| ||||||||||| ||||||||||    
T  29696901 cgaattccggttttagtcactgtaaaaaaaaaaatt-agattttgtccatgtaatttcagattcttccacttttggtccc 29696823  T

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Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 52058045 - 52058124
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| || || |||||||| || ||||||| | ||||||| | |||| ||||||||||| ||||||||||    
T  52058045 cgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattcttccacttttggtccc 52058124  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 30299554 - 30299496
Alignment:
Q  135 gtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  30299554 gtaaaaaaaaagatttagattttgtccctgtaattttagattcttccacttttggtccc 30299496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 39826390 - 39826312
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||| ||||||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| |||||||||    
T  39826390 cgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 39826312  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 17606650 - 17606573
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | ||||||||  | ||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  17606650 cgaattccggttttagtccctgtaaaaaa--agatttagattttgtccttgtaatttcagattcttccacttttggtccc 17606573  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 39970990 - 39970910
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| ||| ||||||||||||||||| | |||| |||| |||||| ||||||||||    
T  39970990 cgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatccttccacttttggtccc 39970910  T

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Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 24467686 - 24467741
Alignment:
Q  138 aaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  24467686 aaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 24467741  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 27039672 - 27039750
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||||||||   |||||||| ||| |||||||||||||||||  || | ||||||||||| | ||||||||    
T  27039672 cgaattccggttttggtccttgtaaaaaa-aaagtttagattttgtccctacaatataagattcttccactattggtccc 27039750  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 33628724 - 33628803
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| |||||| ||| | |||||||| || ||||||||||||||||  | |||| |||||||| || ||||||||||    
T  33628724 cgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattctttcacttttggtccc 33628803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 39711107 - 39711185
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||| | | |||| | ||||||||| ||||||||||    
T  39711107 cgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccttgtaatttcatattcttccacttttggtccc 39711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 39711416 - 39711337
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| |||||| ||| | |||||||| || ||||||||||||||||  | |||| | ||||||||| ||||||||||    
T  39711416 cgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattcttccacttttggtccc 39711337  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 39826084 - 39826163
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || |||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||| ||||    
T  39826084 cgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttgatccc 39826163  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 8293128 - 8293072
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  8293128 aaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 8293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 30299286 - 30299342
Alignment:
Q  135 gtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||    
T  30299286 gtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 34749449 - 34749373
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggt 190  Q
    ||||||||| |||| |||   |||||||| || ||||||||||| ||||| | |||| ||||||||||| |||||||    
T  34749449 cgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattcttccacttttggt 34749373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 32233967 - 32234012
Alignment:
Q  148 tttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32233967 tttagattttgtccctatcatttgagattcttccacttttggtccc 32234012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 7125952 - 7126030
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| |||| ||| | |||||||| || ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  7125952 cgaattccgattttagtccctgtaaaaaa-aagatttagattttgtccctataatttcagattcttccacttttggtccc 7126030  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 7126261 - 7126182
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||||  |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  7126261 cgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 7126182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 17762626 - 17762547
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| |||||| ||| | |||||||| || |||||||||||||||| || |||| ||||||||||| ||||||||||    
T  17762626 cgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattcttccacttttggtccc 17762547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 18336800 - 18336721
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||| ||||    
T  18336800 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttgatccc 18336721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 23979245 - 23979166
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  23979245 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttccacttttggtccc 23979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 31799674 - 31799753
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||  ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  31799674 cgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 31799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 41001696 - 41001618
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| |||   |||||||| || ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  41001696 cgaattccggttttagtccttgtaaaaaa-aagatttagattttgtccctataatttcagattcttccacttttggtccc 41001618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 6817455 - 6817388
Alignment:
Q  124 ttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    |||| ||||| |||||||| |||||||||||||||||||| | |||| | ||||||||| ||||||||    
T  6817455 ttttagtctctgtaaaaaaaaaaatttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 14144245 - 14144166
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| |||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  14144245 cgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttccacttttggtccc 14144166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 24837203 - 24837282
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||| | | |||| | ||||||||| ||||||||||    
T  24837203 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccc 24837282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 41424550 - 41424629
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||| ||||   |||||||| ||| |||||||| ||||||| |||||| ||||||||||| |||| |||||    
T  41424550 cgaattccggtttaggtccttgtaaaaaaaaaagtttagattctgtccctgtcatttcagattcttccacttttagtccc 41424629  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 27159271 - 27159222
Alignment:
Q  144 aaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||||||    
T  27159271 aaaatttagattttgtccctgtaattttatattcttccatttttggtccc 27159222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 14143936 - 14144011
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggt 190  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| |||||||    
T  14143936 cgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattcttccacttttggt 14144011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 14412009 - 14411931
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| |||||||||||||||||| | | |||| |||||||||||  |||||||||    
T  14412009 cgaatttcggttttagtccctgtaaaaaa-aaaatttagattttgtccttgtaatttcagattcttccacgtttggtccc 14411931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 17762317 - 17762395
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||| ||||||| ||| | |||| ||||||||||| ||||||||||    
T  17762317 cgaattccggttttagtccctgtaaaaaa-aagatttatattttgttcctgtaatttcagattcttccacttttggtccc 17762395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 24074337 - 24074416
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| || |||||||||||||| || | |||| | ||||||||| ||||||||||    
T  24074337 cgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattcttccacttttggtccc 24074416  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 24074646 - 24074567
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||||  || | |||||||| || ||||||||||||||| | | |||| | ||||||||| ||||||||||    
T  24074646 cgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccc 24074567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 24651043 - 24650964
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| |||   |||||||| ||||| |||||||| ||||| | |||| ||||||||||| ||||| ||||    
T  24651043 cgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattcttccacttttgatccc 24650964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 29445149 - 29445071
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| ||||| ||| | |||||||| || ||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  29445149 cgaattccagttttagtc-ctgtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccacttttggtccc 29445071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 6817158 - 6817235
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||| ||| | |||||||| || ||||||||| ||||| | | |||| ||||||||||| ||||||||||    
T  6817158 gaattccggttttagtccctgtaaaaaa-aagatttagattatgtccatgtaatttcagattcttccacttttggtccc 6817235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 4919047 - 4919103
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  4919047 aaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 4919103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 18336501 - 18336569
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttcc 181  Q
    ||||||||| |||| ||| | |||||||| ||| ||||||||||||||||| | |||| ||||||||||    
T  18336501 cgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 18336569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 21147970 - 21148050
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| ||| ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  21147970 cgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 21148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 5554903 - 5554982
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||| ||||||||||||||| |||| | ||||||||| ||||||||||    
T  5554903 cgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattcttccacttttggtccc 5554982  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 5555213 - 5555134
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||||| |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  5555213 cgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 5555134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 10108404 - 10108483
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  10108404 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 10108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 14820638 - 14820559
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  14820638 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 14820559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 10108712 - 10108635
Alignment:
Q  116 aattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  10108712 aattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 10108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 30789849 - 30789773
Alignment:
Q  116 aattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| |||||||||    
T  30789849 aattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 10171487 - 10171408
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| |  ||||||||||||||||| | |||| |||||||| || ||||||||||    
T  10171487 cgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctttcacttttggtccc 10171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 26136719 - 26136793
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttg 188  Q
    |||||||| ||||| ||| | |||||||| |||||||||||||||||| | | |||| ||||||||||| |||||    
T  26136719 cgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattcttccaattttg 26136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 39889702 - 39889628
Alignment:
Q  118 ttccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    ||||| |||| ||| | ||||| || |||||||||||| |||||||| ||||| ||||||||||| |||||||||    
T  39889702 ttccgattttagtcccagtaaataaaaaaatttagattatgtccctaccatttcagattcttccacttttggtcc 39889628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 28977674 - 28977782
Alignment:
Q  135 gtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtagaatctgttgacgtgtcatgct 234  Q
    ||||| || |||||||||||| |||||||||||||| | ||| ||||| ||||||||||  | |  ||| |||||| ||||| || ||||||||| | ||    
T  28977674 gtaaataagaaaatttagattctgtccctatcatttcatatttttccacttttggtccctcgctcaaactagtcagcagaatatgctgacgtgtcctact 28977773  T
Q  235 gactgtgta 243  Q
    || ||||||    
T  28977774 gattgtgta 28977782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 39888538 - 39888582
Alignment:
Q  138 aaaaataa-aatttagattttgtccctatcatttgagattcttcc 181  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  39888538 aaaaataataatttagattctgtccctatcatttgagattcttcc 39888582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 14820329 - 14820407
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||  | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  14820329 cgaattccggttttagttcctgtaaaaaa-aagatttagattttgtccctgtaatttcatattcttccacttttggtccc 14820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 43851699 - 43851777
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | ||||| || || ||||||||||||||||| | |||| ||||||||||| ||||| ||||    
T  43851699 cgaattccggttttagtccctgtaaacaa-aagatttagattttgtccctgtaatttcagattcttccacttttgatccc 43851777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 21148279 - 21148201
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||| ||| | |||||||| |||| ||||||||||||| | | |||| | ||||||||| |||| |||||    
T  21148279 gaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattcttccacttttagtccc 21148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 26137004 - 26136950
Alignment:
Q  139 aaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||| |||| ||||||||||||||| | |||| ||||||||||| ||||||||||    
T  26137004 aaaaaaaaaattagattttgtccctgtaatttcagattcttccacttttggtccc 26136950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 43481659 - 43481581
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    |||||||||||||| ||||| |||||||| ||| ||||| ||||||||||| | |||| | ||||||||| | ||||||    
T  43481659 cgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattcttccactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 2583641 - 2583588
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggt 190  Q
    |||||| || ||||| ||||||||||||| |||| ||||||||||| |||||||    
T  2583641 aaaaaaaaagatttaaattttgtccctataatttcagattcttccacttttggt 2583588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 14767564 - 14767620
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| || ||||||||||||||||| | |||| ||||| ||||| ||||||||||    
T  14767564 aaaaaaaaagatttagattttgtccctgtaatttcagatttttccacttttggtccc 14767620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 8666 - 8587
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| |  ||||||| || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  8666 cgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattcttccacttttggtccc 8587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 12326 - 12248
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||||| ||| |  ||||||| || ||||||||||||||||| | |||| ||||||||||| |||||||||    
T  12326 cgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 12248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 30958718 - 30958795
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||| ||||||| ||| | |||||||| ||| |||||||||  |||||||||||||||||||||||| |||||||||    
T  30958718 cgaatttcggttttagtccctgtaaaaaa-aaagtttagatttcatccctatcatttgagattcttccacttttggtcc 30958795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 20499087 - 20499011
Alignment:
Q  116 aattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| |||||||| || |||||||||    
T  20499087 aattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattctttcacttttggtcc 20499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 23046741 - 23046809
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttcca 182  Q
    ||||||||||||||||||||  ||||||| | |||||||||| ||||||| | |||| |||||||||||    
T  23046741 cgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattcttcca 23046809  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 23806296 - 23806217
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  23806296 cgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 23806217  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 26135851 - 26135930
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| |||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||| | ||||||||||    
T  26135851 cgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtccc 26135930  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 26236415 - 26236360
Alignment:
Q  138 aaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||| || ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  26236415 aaaaaaaagatttagattttgtccctgtaatttcagattcttccatttttggtccc 26236360  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 22263537 - 22263456
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaa--tttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||||| |||||||| ||||  || ||||||||||||| | |||| | ||||||||| ||||||||||    
T  22263537 cgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattcttccacttttggtccc 22263456  T

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Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 23855008 - 23854931
Alignment:
Q  115 gaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||||||| ||| | |||||||| ||||||||||||||||| || | |||| | ||||||||| ||||||||||    
T  23855008 gaattccggttttagtccccgtaaaaaa-aaaatttagattttgtctctgtaattttatattcttccacttttggtccc 23854931  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 17463126 - 17463204
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| |||||| ||||||||||||| | |||| || |||| ||| ||||||||||    
T  17463126 cgaattccggttttagtcgctgtaaaaaaaaaaatt-agattttgtccctgtaatttcaggttctcccacttttggtccc 17463204  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 17463435 - 17463356
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||  | ||||||||| ||||| ||||    
T  17463435 cgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattcttccacttttgatccc 17463356  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 19251505 - 19251583
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| ||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  19251505 cgaatttcggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattcttccacttttggtccc 19251583  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 23854722 - 23854797
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttgg 189  Q
    |||||| ||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||    
T  23854722 cgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttgg 23854797  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 30390493 - 30390572
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| ||||  || | |||||||| |||| ||||||||||||||| | |||| | ||||||||| ||||||||||    
T  30390493 cgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccacttttggtccc 30390572  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 15106386 - 15106332
Alignment:
Q  139 aaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||| |||||||||||||||||||| | |||| ||||||||||| ||||| ||||    
T  15106386 aaaaaaaaatttagattttgtccctgtaatttcagattcttccacttttgatccc 15106332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 26560899 - 26560821
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaat-ttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    ||||||||| |||| ||| |||||||||| ||||  ||||||||||||| ||| |||| | ||||||||| ||||||||    
T  26560899 cgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattcttccacttttggtc 26560821  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 17850896 - 17850851
Alignment:
Q  148 tttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccc 17850851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 20498781 - 20498884
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtcccgtgttgtaacaagtcagtag 213  Q
    |||||| ||||||| ||| | |||||||| || ||||||||| ||||||| | |||| ||||||||||| ||||||||||   || || || ||||||||    
T  20498781 cgaattacggttttagtccctgtaaaaaa-aatatttagattatgtccctgt-atttcagattcttccacttttggtccctccttttatcacgtcagtag 20498878  T
Q  214 aatctg 219  Q
    ||||||    
T  20498879 aatctg 20498884  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 21481035 - 21481108
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccattttt 187  Q
    |||||||| ||||| |||   |||||||| |||||||||||| |||||  ||||||| ||||||||||| ||||    
T  21481035 cgaattccagttttagtccttgtaaaaaaaaaaatttagattatgtcctcatcattttagattcttccactttt 21481108  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 21482190 - 21482145
Alignment:
Q  148 tttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||    
T  21482190 tttagattttgtccctgtcattttagattcttccacttttagtccc 21482145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 44098966 - 44098898
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttcca 182  Q
    ||||||| |||||||||  | |||||||| | |||||||||| ||||||| | |||| |||||||||||    
T  44098966 cgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattcttcca 44098898  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 9154914 - 9154990
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggt 190  Q
    ||||||||| |||| ||| | |||||||| || ||||||||||||||||| | |||| ||||||||||| |||||||    
T  9154914 cgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccagttttggt 9154990  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 32017847 - 32017769
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  32017847 cgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattcttccacttttggtccc 32017769  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9481216 - 9481295
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| ||| | |||||||| |  ||||||||| ||||||| | |||| | ||||||||| ||||||||||    
T  9481216 cgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttccaattttggtccc 9481295  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 19284163 - 19284242
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| ||||| |||   |||||| | || ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  19284163 cgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttccacttttggtccc 19284242  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 21069548 - 21069627
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaa-tttagattttgtccctatcatttgagattcttccatttttggtcc 192  Q
    |||||||||||||| ||| | |||||||| |||| |||||||| ||||||| | || | ||||||||||||||| |||||    
T  21069548 cgaattccggttttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatatcagattcttccattttaggtcc 21069627  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 9481505 - 9481447
Alignment:
Q  135 gtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||| || ||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  9481505 gtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccacttttggtccc 9481447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 24731995 - 24732051
Alignment:
Q  137 aaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||| |||| ||||||||||||||| | |||| ||||||||| | ||||||||||    
T  24731995 aaaaaaaaaaaattagattttgtccctgtaatttcagattcttctacttttggtccc 24732051  T

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Target: scaffold0449 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 7544 - 7466
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    |||||||||||||| ||| | |||||||| ||| ||||||||||||||||| | |||| ||||||||| | ||||||||    
T  7544 cgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtc 7466  T

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Target: scaffold0881 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 253 - 333
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||| |||||| || || |||||||| ||| ||||||||||| |||| || |||| ||||||||||| ||||||||||    
T  253 cgaattctggttttagtttccgtaaaaaaaaaagatttagattttctccccataatttcagattcttccacttttggtccc 333  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 4596 - 4676
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaa-atttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    ||||||||| |||| ||| | |||||||| ||| ||||| ||||||||||| | |||||||||||||| | ||||||||||    
T  4596 cgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattcttctacttttggtccc 4676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 5091 - 5013
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtccc 193  Q
    |||||||||||||| |||   |||||||| || |||||||||| |||||| | |||| ||||||||||| ||||||||||    
T  5091 cgaattccggtttttgtcctagtaaaaaa-aatatttagatttagtccctgtaattttagattcttccacttttggtccc 5013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 3903 - 3980
Alignment:
Q  114 cgaattccggttttggtctcggtaaaaaataaaatttagattttgtccctatcatttgagattcttccatttttggtc 191  Q
    |||||||||||||| ||| | |||||||| || ||||||||| ||||||| | |||| | ||||||||| | ||||||    
T  3903 cgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattcttccactgttggtc 3980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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