View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2071_low_35 (Length: 430)

Name: NF2071_low_35
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2071_low_35
NF2071_low_35
[»] chr6 (54 HSPs)
chr6 (20-426)||(1191714-1192142)
chr6 (97-337)||(1178462-1178710)
chr6 (20-69)||(9107384-9107433)
chr6 (20-69)||(8776987-8777036)
chr6 (20-69)||(16766693-16766742)
chr6 (20-69)||(7977844-7977893)
chr6 (20-69)||(12696320-12696369)
chr6 (20-69)||(17841603-17841652)
chr6 (20-69)||(34595130-34595179)
chr6 (20-66)||(5970122-5970168)
chr6 (20-85)||(16833290-16833353)
chr6 (20-69)||(1681754-1681803)
chr6 (20-69)||(7801170-7801219)
chr6 (20-69)||(10770688-10770737)
chr6 (20-69)||(31959155-31959204)
chr6 (21-69)||(7938112-7938160)
chr6 (21-69)||(19040348-19040396)
chr6 (23-69)||(10842528-10842574)
chr6 (20-66)||(25010216-25010262)
chr6 (20-58)||(31384927-31384965)
chr6 (20-69)||(426528-426577)
chr6 (20-69)||(853873-853922)
chr6 (20-69)||(8365533-8365582)
chr6 (20-69)||(28152095-28152143)
chr6 (20-65)||(28715295-28715340)
chr6 (21-69)||(3398615-3398662)
chr6 (21-69)||(7265608-7265656)
chr6 (21-65)||(9025509-9025553)
chr6 (21-69)||(9658875-9658923)
chr6 (21-69)||(17341679-17341727)
chr6 (21-69)||(26562685-26562733)
chr6 (21-69)||(33001304-33001352)
chr6 (21-65)||(34225824-34225868)
chr6 (20-74)||(3209372-3209427)
chr6 (21-68)||(7996393-7996440)
chr6 (21-68)||(8022361-8022408)
chr6 (20-66)||(8713978-8714025)
chr6 (21-56)||(16388248-16388283)
chr6 (20-66)||(2224225-2224271)
chr6 (20-58)||(9522898-9522936)
chr6 (20-66)||(15489746-15489792)
chr6 (20-66)||(17435198-17435244)
chr6 (20-69)||(32978913-32978963)
chr6 (21-58)||(7151419-7151456)
chr6 (20-64)||(9911542-9911587)
chr6 (20-67)||(4877940-4877988)
chr6 (21-69)||(8931617-8931665)
chr6 (21-69)||(9027174-9027222)
chr6 (37-69)||(12868706-12868738)
chr6 (21-69)||(16488605-16488653)
chr6 (21-69)||(18367832-18367880)
chr6 (21-69)||(21924950-21924998)
chr6 (21-57)||(31579240-31579276)
chr6 (21-65)||(32511681-32511725)
[»] chr3 (50 HSPs)
chr3 (19-69)||(21479114-21479164)
chr3 (20-69)||(4987305-4987354)
chr3 (22-69)||(14979177-14979224)
chr3 (20-65)||(26508110-26508155)
chr3 (20-69)||(28917997-28918046)
chr3 (20-69)||(34910313-34910362)
chr3 (24-66)||(3164043-3164085)
chr3 (21-67)||(7928448-7928494)
chr3 (23-69)||(10954948-10954994)
chr3 (20-65)||(1509539-1509584)
chr3 (20-69)||(10268500-10268549)
chr3 (20-69)||(14209109-14209158)
chr3 (20-69)||(15796308-15796357)
chr3 (20-65)||(21257000-21257045)
chr3 (20-69)||(26492219-26492268)
chr3 (20-69)||(34185137-34185186)
chr3 (24-65)||(51206371-51206412)
chr3 (20-69)||(55401071-55401120)
chr3 (21-94)||(25948902-25948979)
chr3 (20-68)||(35994752-35994799)
chr3 (20-68)||(49651800-49651848)
chr3 (30-69)||(40052328-40052367)
chr3 (20-69)||(14747557-14747607)
chr3 (20-69)||(8587035-8587084)
chr3 (20-69)||(14832095-14832144)
chr3 (20-69)||(20503461-20503510)
chr3 (20-69)||(28812511-28812560)
chr3 (21-69)||(1550136-1550184)
chr3 (21-69)||(8383253-8383301)
chr3 (21-69)||(25064905-25064953)
chr3 (20-68)||(27505243-27505291)
chr3 (21-59)||(11251984-11252022)
chr3 (21-67)||(11313815-11313861)
chr3 (20-85)||(14829672-14829734)
chr3 (24-85)||(16000034-16000093)
chr3 (20-69)||(11610517-11610566)
chr3 (21-66)||(23870574-23870619)
chr3 (21-58)||(29508451-29508488)
chr3 (37-69)||(3865587-3865619)
chr3 (21-57)||(4201404-4201440)
chr3 (21-65)||(9624641-9624685)
chr3 (37-69)||(10318065-10318097)
chr3 (21-65)||(10690277-10690321)
chr3 (21-69)||(12704003-12704051)
chr3 (24-68)||(16789668-16789712)
chr3 (21-69)||(18426945-18426993)
chr3 (21-69)||(25093498-25093546)
chr3 (21-65)||(27277853-27277897)
chr3 (21-65)||(34307795-34307839)
chr3 (20-68)||(55212960-55213008)
[»] scaffold0652 (1 HSPs)
scaffold0652 (20-69)||(476-525)
[»] scaffold0223 (1 HSPs)
scaffold0223 (20-69)||(20168-20217)
[»] scaffold0103 (1 HSPs)
scaffold0103 (20-69)||(51807-51856)
[»] chr8 (43 HSPs)
chr8 (20-69)||(29510318-29510367)
chr8 (20-85)||(4673439-4673502)
chr8 (20-65)||(25566841-25566886)
chr8 (20-69)||(36450768-36450817)
chr8 (20-69)||(22595990-22596039)
chr8 (20-69)||(22651972-22652021)
chr8 (20-69)||(30271305-30271354)
chr8 (21-69)||(15816144-15816192)
chr8 (20-68)||(18407716-18407764)
chr8 (24-68)||(41831958-41832002)
chr8 (20-67)||(8342970-8343017)
chr8 (20-67)||(8343314-8343361)
chr8 (30-69)||(13436988-13437027)
chr8 (20-66)||(2572070-2572116)
chr8 (20-58)||(4948659-4948697)
chr8 (20-69)||(4298900-4298949)
chr8 (20-69)||(20873065-20873114)
chr8 (20-69)||(22197756-22197805)
chr8 (20-61)||(30077401-30077442)
chr8 (20-69)||(31556993-31557041)
chr8 (21-66)||(34897084-34897129)
chr8 (21-69)||(11927101-11927149)
chr8 (21-69)||(13844611-13844659)
chr8 (21-69)||(24362217-24362265)
chr8 (21-69)||(25192362-25192410)
chr8 (21-69)||(31236592-31236640)
chr8 (21-69)||(39954294-39954342)
chr8 (20-67)||(24613519-24613565)
chr8 (27-66)||(41838144-41838183)
chr8 (21-59)||(3025557-3025595)
chr8 (21-67)||(4611532-4611578)
chr8 (27-69)||(27101511-27101553)
chr8 (24-69)||(5813588-5813633)
chr8 (21-58)||(14134706-14134743)
chr8 (20-65)||(21465412-21465457)
chr8 (36-69)||(24196627-24196660)
chr8 (21-74)||(27213538-27213591)
chr8 (21-66)||(36934669-36934714)
chr8 (20-65)||(40332191-40332236)
chr8 (21-69)||(7658459-7658507)
chr8 (21-69)||(11944661-11944709)
chr8 (21-65)||(14731712-14731756)
chr8 (32-64)||(35519833-35519865)
[»] chr7 (37 HSPs)
chr7 (20-69)||(24339638-24339687)
chr7 (20-69)||(25481898-25481947)
chr7 (20-69)||(13770687-13770736)
chr7 (20-61)||(26033475-26033516)
chr7 (20-68)||(7438703-7438751)
chr7 (21-69)||(29787384-29787432)
chr7 (20-67)||(3991322-3991369)
chr7 (20-67)||(11061090-11061137)
chr7 (22-69)||(32308116-32308163)
chr7 (22-69)||(35861960-35862007)
chr7 (20-62)||(5409850-5409892)
chr7 (20-65)||(9778500-9778545)
chr7 (20-69)||(18215200-18215249)
chr7 (20-69)||(23191892-23191941)
chr7 (20-69)||(24105674-24105723)
chr7 (21-65)||(11665455-11665499)
chr7 (21-65)||(19992001-19992045)
chr7 (20-67)||(8234144-8234191)
chr7 (20-67)||(9408348-9408395)
chr7 (22-69)||(30731033-30731080)
chr7 (21-59)||(2424620-2424658)
chr7 (20-66)||(11831431-11831477)
chr7 (20-58)||(13300417-13300455)
chr7 (21-67)||(20549789-20549835)
chr7 (20-74)||(25822646-25822700)
chr7 (24-66)||(43027487-43027529)
chr7 (20-69)||(7197311-7197360)
chr7 (21-66)||(26733303-26733348)
chr7 (20-69)||(27945037-27945086)
chr7 (20-69)||(28155566-28155615)
chr7 (20-64)||(32094034-32094079)
chr7 (20-69)||(11272600-11272651)
chr7 (21-57)||(11890934-11890970)
chr7 (21-69)||(15680805-15680853)
chr7 (21-69)||(19206046-19206094)
chr7 (21-69)||(22868038-22868086)
chr7 (21-65)||(42720905-42720949)
[»] chr1 (68 HSPs)
chr1 (20-69)||(113295-113344)
chr1 (21-85)||(5898281-5898343)
chr1 (20-73)||(31015035-31015088)
chr1 (20-65)||(42359463-42359508)
chr1 (21-69)||(398780-398828)
chr1 (21-65)||(1486724-1486768)
chr1 (22-69)||(12443476-12443523)
chr1 (20-67)||(31672909-31672956)
chr1 (20-66)||(16297297-16297343)
chr1 (20-93)||(22515901-22515972)
chr1 (21-67)||(23738676-23738722)
chr1 (20-66)||(38078675-38078721)
chr1 (20-69)||(22881630-22881679)
chr1 (20-65)||(24577200-24577245)
chr1 (20-69)||(46348397-46348446)
chr1 (21-69)||(36878457-36878505)
chr1 (21-69)||(37598828-37598875)
chr1 (20-67)||(1705006-1705053)
chr1 (20-67)||(21378576-21378623)
chr1 (20-67)||(40258947-40258994)
chr1 (21-67)||(1864895-1864941)
chr1 (20-69)||(40917747-40917794)
chr1 (20-69)||(6612185-6612234)
chr1 (20-68)||(13011229-13011278)
chr1 (20-69)||(14359536-14359584)
chr1 (20-65)||(18190122-18190167)
chr1 (20-69)||(18556470-18556519)
chr1 (20-69)||(19058870-19058919)
chr1 (20-69)||(48450601-48450650)
chr1 (20-68)||(51410021-51410070)
chr1 (21-69)||(1262880-1262928)
chr1 (25-69)||(2896140-2896184)
chr1 (21-85)||(5944263-5944327)
chr1 (20-56)||(18337338-18337374)
chr1 (21-65)||(40181871-40181915)
chr1 (22-69)||(9828040-9828087)
chr1 (21-60)||(16927200-16927239)
chr1 (24-67)||(17754309-17754352)
chr1 (24-67)||(23652997-23653040)
chr1 (21-68)||(25098570-25098617)
chr1 (20-67)||(32434730-32434777)
chr1 (23-69)||(9103636-9103682)
chr1 (23-69)||(17831548-17831594)
chr1 (29-59)||(23705489-23705519)
chr1 (21-67)||(34298434-34298480)
chr1 (20-85)||(47989480-47989542)
chr1 (20-69)||(1815253-1815302)
chr1 (20-65)||(6332671-6332715)
chr1 (21-58)||(7918226-7918263)
chr1 (20-66)||(18471297-18471345)
chr1 (21-66)||(19324561-19324606)
chr1 (20-65)||(28273102-28273147)
chr1 (20-69)||(29144372-29144421)
chr1 (20-69)||(32461477-32461526)
chr1 (20-69)||(41877484-41877533)
chr1 (21-69)||(5376515-5376563)
chr1 (21-69)||(6427346-6427394)
chr1 (21-69)||(10572604-10572652)
chr1 (21-69)||(10577750-10577798)
chr1 (21-69)||(13436454-13436502)
chr1 (21-69)||(13997879-13997927)
chr1 (22-62)||(15323166-15323206)
chr1 (37-65)||(17778549-17778577)
chr1 (21-69)||(19562636-19562684)
chr1 (25-69)||(21366039-21366083)
chr1 (21-69)||(25361882-25361930)
chr1 (23-67)||(26238129-26238173)
chr1 (20-68)||(35702602-35702650)
[»] chr5 (43 HSPs)
chr5 (20-68)||(21191070-21191118)
chr5 (20-69)||(6247618-6247667)
chr5 (20-69)||(14674265-14674314)
chr5 (20-69)||(21576759-21576808)
chr5 (20-69)||(31084319-31084368)
chr5 (20-65)||(39698541-39698586)
chr5 (21-93)||(7677677-7677749)
chr5 (20-67)||(37328858-37328905)
chr5 (20-67)||(42893358-42893405)
chr5 (20-69)||(17177037-17177086)
chr5 (20-69)||(21522746-21522795)
chr5 (20-69)||(21533312-21533361)
chr5 (21-68)||(3966500-3966547)
chr5 (20-67)||(41633733-41633780)
chr5 (24-66)||(13287417-13287459)
chr5 (20-66)||(43001799-43001845)
chr5 (20-69)||(8420023-8420072)
chr5 (20-69)||(19579697-19579746)
chr5 (20-69)||(24906315-24906364)
chr5 (20-69)||(27932231-27932280)
chr5 (20-69)||(33178021-33178070)
chr5 (21-85)||(41995453-41995515)
chr5 (21-65)||(6471904-6471948)
chr5 (25-69)||(19552562-19552606)
chr5 (21-69)||(22013410-22013458)
chr5 (21-69)||(28588689-28588737)
chr5 (20-67)||(21351919-21351966)
chr5 (20-66)||(7218281-7218327)
chr5 (20-69)||(15883983-15884033)
chr5 (21-67)||(34276870-34276916)
chr5 (20-69)||(10298565-10298614)
chr5 (20-65)||(15405069-15405114)
chr5 (21-85)||(27144445-27144507)
chr5 (21-58)||(40131628-40131665)
chr5 (20-69)||(4105253-4105304)
chr5 (21-57)||(5467993-5468029)
chr5 (20-69)||(15382473-15382524)
chr5 (20-68)||(21542027-21542075)
chr5 (21-69)||(21814257-21814305)
chr5 (30-74)||(22611761-22611805)
chr5 (21-65)||(24273045-24273089)
chr5 (21-65)||(24389125-24389169)
chr5 (21-65)||(41091272-41091316)
[»] scaffold0066 (1 HSPs)
scaffold0066 (20-74)||(33377-33431)
[»] scaffold0361 (1 HSPs)
scaffold0361 (20-69)||(14526-14575)
[»] scaffold0027 (1 HSPs)
scaffold0027 (20-69)||(46678-46727)
[»] chr4 (45 HSPs)
chr4 (20-69)||(23293000-23293049)
chr4 (20-68)||(3947780-3947828)
chr4 (20-68)||(21945500-21945548)
chr4 (20-69)||(11596366-11596415)
chr4 (20-65)||(28964262-28964307)
chr4 (21-69)||(49431021-49431070)
chr4 (20-64)||(29205445-29205489)
chr4 (21-65)||(54580038-54580082)
chr4 (20-67)||(38847026-38847073)
chr4 (21-67)||(2361990-2362036)
chr4 (21-67)||(8423733-8423779)
chr4 (20-85)||(19482650-19482713)
chr4 (20-69)||(30298942-30298992)
chr4 (20-69)||(30327810-30327860)
chr4 (20-69)||(12895130-12895179)
chr4 (20-65)||(51701258-51701303)
chr4 (20-67)||(715621-715669)
chr4 (20-67)||(752947-752995)
chr4 (20-64)||(14465089-14465133)
chr4 (21-65)||(15029765-15029809)
chr4 (21-65)||(24999044-24999088)
chr4 (21-69)||(40613446-40613494)
chr4 (27-66)||(11651155-11651194)
chr4 (26-69)||(50280877-50280920)
chr4 (21-67)||(13783279-13783325)
chr4 (20-69)||(28084517-28084567)
chr4 (20-69)||(42640522-42640574)
chr4 (20-66)||(47263985-47264031)
chr4 (20-57)||(6485625-6485662)
chr4 (21-66)||(22440615-22440660)
chr4 (21-58)||(36635331-36635368)
chr4 (20-65)||(37203264-37203309)
chr4 (20-69)||(40481633-40481681)
chr4 (21-57)||(903930-903966)
chr4 (25-69)||(4672104-4672148)
chr4 (21-69)||(5414187-5414235)
chr4 (21-69)||(12895289-12895337)
chr4 (21-69)||(14126126-14126174)
chr4 (21-93)||(16189682-16189753)
chr4 (22-69)||(22234906-22234954)
chr4 (21-69)||(24343503-24343551)
chr4 (21-69)||(35158000-35158048)
chr4 (22-66)||(38148741-38148785)
chr4 (21-57)||(40179651-40179687)
chr4 (21-65)||(56257933-56257977)
[»] chr2 (42 HSPs)
chr2 (20-69)||(21374713-21374762)
chr2 (21-69)||(28677905-28677953)
chr2 (20-67)||(30717544-30717591)
chr2 (20-65)||(2438733-2438778)
chr2 (20-69)||(30404864-30404913)
chr2 (20-69)||(37419739-37419788)
chr2 (20-69)||(37558973-37559022)
chr2 (20-69)||(38117173-38117222)
chr2 (21-69)||(21616758-21616806)
chr2 (21-69)||(21782833-21782881)
chr2 (21-69)||(24894385-24894433)
chr2 (20-74)||(11223877-11223931)
chr2 (20-69)||(19536411-19536461)
chr2 (20-66)||(20539688-20539734)
chr2 (20-65)||(12940949-12940994)
chr2 (20-69)||(15657860-15657909)
chr2 (20-69)||(15972869-15972918)
chr2 (20-69)||(30335413-30335462)
chr2 (21-69)||(12668438-12668486)
chr2 (21-68)||(18276518-18276565)
chr2 (21-68)||(36409642-36409689)
chr2 (21-68)||(37411259-37411306)
chr2 (20-66)||(974746-974792)
chr2 (21-67)||(1327976-1328022)
chr2 (21-67)||(23718024-23718070)
chr2 (21-67)||(24105696-24105742)
chr2 (21-67)||(31808075-31808121)
chr2 (20-66)||(39323263-39323309)
chr2 (20-69)||(6940251-6940300)
chr2 (20-68)||(14996237-14996286)
chr2 (20-69)||(18421959-18422008)
chr2 (20-65)||(18841027-18841072)
chr2 (20-69)||(33153420-33153469)
chr2 (21-66)||(36756359-36756404)
chr2 (21-69)||(16069269-16069317)
chr2 (20-68)||(20473319-20473367)
chr2 (22-69)||(27460022-27460070)
chr2 (21-57)||(28412358-28412394)
chr2 (21-65)||(29176508-29176552)
chr2 (21-69)||(31284044-31284092)
chr2 (21-57)||(35449521-35449557)
chr2 (21-65)||(44860320-44860364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-69)||(71719-71771)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-68)||(130479-130527)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-69)||(241590-241638)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-69)||(178832-178882)
[»] scaffold0306 (1 HSPs)
scaffold0306 (20-69)||(13396-13445)
[»] scaffold0152 (1 HSPs)
scaffold0152 (20-69)||(21882-21931)
[»] scaffold0122 (1 HSPs)
scaffold0122 (21-74)||(8001-8054)
[»] scaffold0053 (1 HSPs)
scaffold0053 (20-69)||(8794-8843)
[»] scaffold0050 (1 HSPs)
scaffold0050 (21-66)||(70277-70322)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-65)||(17763-17808)
[»] scaffold0004 (1 HSPs)
scaffold0004 (20-69)||(92803-92852)
[»] scaffold0793 (1 HSPs)
scaffold0793 (20-67)||(4897-4945)
[»] scaffold0227 (1 HSPs)
scaffold0227 (21-69)||(7326-7374)
[»] scaffold0136 (1 HSPs)
scaffold0136 (20-68)||(3863-3911)
[»] scaffold1528 (1 HSPs)
scaffold1528 (24-67)||(1033-1076)
[»] scaffold0722 (1 HSPs)
scaffold0722 (20-66)||(7046-7092)
[»] scaffold0020 (1 HSPs)
scaffold0020 (21-67)||(135327-135373)
[»] scaffold0246 (1 HSPs)
scaffold0246 (20-69)||(19572-19620)
[»] scaffold0171 (1 HSPs)
scaffold0171 (21-85)||(23402-23464)
[»] scaffold0450 (1 HSPs)
scaffold0450 (20-68)||(8649-8697)
[»] scaffold0123 (1 HSPs)
scaffold0123 (21-65)||(44540-44584)
[»] scaffold0044 (1 HSPs)
scaffold0044 (21-69)||(53176-53224)
[»] scaffold0025 (1 HSPs)
scaffold0025 (20-63)||(23771-23815)


Alignment Details
Target: chr6 (Bit Score: 313; Significance: 1e-176; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 20 - 426
Target Start/End: Original strand, 1191714 - 1192142
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg-----------------cttcatagtattatatt 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||                 |||||||||||||||||    
T  1191714 gtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcgcgtgtccgtgtcagtgtccgtgtcgtgtccgtgcttcatagtattatatt 1191813  T
Q  103 ctatcaatatcaatgagtgaatattaattagtattgccttccctctcccaaagaatgaagcacagacacacaaacatttacacgttgacaccgatct--- 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  1191814 ctatcaatatcaatgagtgaatattaattagtattgccttccctctcccaaagaatgaagcacagacacacaaacatttacacgttgacaccgatctaat 1191913  T
Q  200 --tgagaaaattacgtaaacaaatataatcacttatgtcggtgtcacatcgtgtcggtgtcgaacattgacatgtgttgtacaccagaacacaccatgga 297  Q
      |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  1191914 cttgagaaaattacataaacaaatataatcacttatgtcggtgtcacatcgtgtcggtgtcggacattaacatgtgttgtacaccagaacacaccgtgga 1192013  T
Q  298 tcataagtgccggttctatatcaagctattacacttctctctatttctttcggtataaaatttcagctcgatctcattgttgtgtacctatgatatcaat 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1192014 tcataagtgccggttctatatcaagctattacacttctctctatttctttcagtataaaatttcagctcgatctcattgttgtgtacctatgatatcaat 1192113  T
Q  398 cagcaagcaacaagcctttcatctcactc 426  Q
     ||||||||||||||||||||||||||||    
T  1192114 tagcaagcaacaagcctttcatctcactc 1192142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 337
Target Start/End: Original strand, 1178462 - 1178710
Alignment:
Q  97 tatattctatcaatatcaatgag----tgaa-tattaattagtattgccttccctctcccaaagaatgaagcacagacacacaaacatttacacgttgac 191  Q
    |||||||||||||||||||||||    |||  ||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||    
T  1178462 tatattctatcaatatcaatgagagcttgaggtattaat-agtattgccttccctctcccaaagaaagaagcacaaacatacaaacacttacacgttgac 1178560  T
Q  192 ac-----cgatcttgagaaaattacgtaaacaaatataatcacttatgtcggtgtcacatcgtgtcggtgtcgaacattgacatgtgttgtacaccagaa 286  Q
    ||     | |||||||||||||||| |||||||||||||  || | ||||  || |  || ||||| |   |  |||||||||||||| ||||||| |||    
T  1178561 actgatacaatcttgagaaaattacataaacaaatataagtacatgtgtcaatgccgtatagtgtcaggaccagacattgacatgtgtcgtacaccggaa 1178660  T
Q  287 cacaccatggatcataagtgccggttctatatcaagctattacacttctct 337  Q
    |||||||| ||||||||| | ||||| |||| ||||||||||| |||||||    
T  1178661 cacaccat-gatcataaggggcggttttataacaagctattacgcttctct 1178710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 9107384 - 9107433
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9107384 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 9107433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 8776987 - 8777036
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8776987 gtaattacactgaattttgtgattttttcaaattattagttgtgtcggcg 8777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 16766742 - 16766693
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16766742 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 16766693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7977844 - 7977893
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  7977844 gtaattacactgaattatgtaattttttcaaattattagctgtgtcggcg 7977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 12696369 - 12696320
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  12696369 gtaattacactgaattatgtaattttttcaaattattagctgtgtcggcg 12696320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 17841603 - 17841652
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  17841603 gtaattacactaaattatgtgattttttcaaattattagctgtgtcggcg 17841652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 34595179 - 34595130
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  34595179 gtaattacactgaattatgtgattttttcaaattattagttgtgtcggcg 34595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 5970122 - 5970168
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  5970122 gtaattacactgaattatgtgattttttcaaattattaactgtgtcg 5970168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 16833353 - 16833290
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||  |||| ||||||||||||    
T  16833353 gtaattacactgaagtatgtgattttttcaaattattagttgtgtcg--gcgtgtcagtgtctgtg 16833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 1681803 - 1681754
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  1681803 gtaattacactgaattacgtgattttttcaaattattagttgtgtcggcg 1681754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7801170 - 7801219
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  7801170 gtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcg 7801219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 10770688 - 10770737
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  10770688 gtaattacactgaattatgtgattttttcaaattattagttgtgttggcg 10770737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 31959204 - 31959155
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  31959204 gtaattacactgcattatgtgattttttcaaattattagctgtgacggcg 31959155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 7938160 - 7938112
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| | |||||||||||||||||||||||||||||||    
T  7938160 taattacactaaattatatgattttttcaaattattagctgtgtcggcg 7938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 19040396 - 19040348
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  19040396 taattacactgaattatgtgattttctcaaattattagcggtgtcggcg 19040348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 10842574 - 10842528
Alignment:
Q  23 attacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcg 10842528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 25010216 - 25010262
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||    
T  25010216 gtaataacgctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 31384965 - 31384927
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattag 58  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31384965 gtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 426528 - 426577
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| | |||| ||||||||||||||||||||| |||||||||||    
T  426528 gtaattacatttaattatgtgattttttcaaattattaactgtgtcggcg 426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 853873 - 853922
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||||||    
T  853873 gtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcg 853922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 8365533 - 8365582
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| ||||| |||||| ||||||||||||||| ||||||||||    
T  8365533 gtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcg 8365582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 28152143 - 28152095
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  28152143 gtaattacactgaattatgtgattttt-caaattattagctttgtcggcg 28152095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 28715340 - 28715295
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  28715340 gtaattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 3398662 - 3398615
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  3398662 taattacactgaattatatgattttt-caaattattagctgtgtcggcg 3398615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 7265608 - 7265656
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||| ||||    
T  7265608 taattacactgaattatgtgattttctcaaattattagcggtgttggcg 7265656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 9025509 - 9025553
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||    
T  9025509 taattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 9658923 - 9658875
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||||||    
T  9658923 taattacactgaattatgtgattttcttaaattattagcggtgtcggcg 9658875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 17341679 - 17341727
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||| | |||||||||    
T  17341679 taattacactgaattatgtgattttatcaaattattaacggtgtcggcg 17341727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 26562733 - 26562685
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||||||||    
T  26562733 taattacactgaattatgtgattttctcaaatttttagcagtgtcggcg 26562685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 33001304 - 33001352
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||| | |||| ||||||||||||||||||||||| |||||||||    
T  33001304 taattacatttaattatgtgattttttcaaattattagcagtgtcggcg 33001352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 34225824 - 34225868
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtc 34225868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 3209427 - 3209372
Alignment:
Q  20 gtaattacactgaattttgtgatttttt-caaattattagctgtgtcggcgcgtct 74  Q
    ||||| ||||| |||| ||||||||||| |||||||||||||||||||||| ||||    
T  3209427 gtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtct 3209372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 7996393 - 7996440
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||||||||| | ||||||| ||||||||||||| ||||||||    
T  7996393 taattacactgaattatatgattttctcaaattattagcagtgtcggc 7996440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 8022408 - 8022361
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||||||||| | ||||||| ||||||||||||| ||||||||    
T  8022408 taattacactgaattatatgattttctcaaattattagcagtgtcggc 8022361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 8714025 - 8713978
Alignment:
Q  20 gtaattacactgaattttgtgatt-ttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  8714025 gtaattacactgaattatgtgatttttttcaaattattaactgtgtcg 8713978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatt 56  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 2224271 - 2224225
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| | ||||||||| ||||||||||||| ||||    
T  2224271 gtaattacactgaattatatgatttttttaaattattagctgcgtcg 2224225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 9522936 - 9522898
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattag 58  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  9522936 gtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 15489746 - 15489792
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||| |||||| ||| |||||||||||||||||| |||||||    
T  15489746 gtaattacattgaattgtgtaattttttcaaattattagttgtgtcg 15489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 17435244 - 17435198
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| ||| ||||||| |||||||||||| |||||    
T  17435244 gtaattacactgaattatgtaattttttaaaattattagctatgtcg 17435198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 32978913 - 32978963
Alignment:
Q  20 gtaattacactgaattttgtgatttt-ttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  32978913 gtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcg 32978963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 7151456 - 7151419
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattag 58  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  7151456 taattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9911542 - 9911587
Alignment:
Q  20 gtaattacactgaattttgtgattt-tttcaaattattagctgtgt 64  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  9911542 gtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 4877988 - 4877940
Alignment:
Q  20 gtaattacactgaattttgtga-ttttttcaaattattagctgtgtcgg 67  Q
    ||||||| ||| |||| ||||| ||||||||||||||||||||||||||    
T  4877988 gtaattatacttaattatgtgacttttttcaaattattagctgtgtcgg 4877940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 8931617 - 8931665
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||||||| ||| ||||| ||||||| |||||||||||||||    
T  8931617 taattatactgaattatgttattttctcaaatttttagctgtgtcggcg 8931665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 9027222 - 9027174
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| ||||| ||||||| | ||||||||||||| |||||||||    
T  9027222 taattacacggaattatgtgattatctcaaattattagcggtgtcggcg 9027174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 12868706 - 12868738
Alignment:
Q  37 tgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||||||| |||||||||||    
T  12868706 tgtgattttttcaaattattaactgtgtcggcg 12868738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 16488605 - 16488653
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||||||||||| | |||  ||||||||||||||||    
T  16488605 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcg 16488653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 18367880 - 18367832
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||||||||||| | |||  ||||||||||||||||    
T  18367880 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcg 18367832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 21924950 - 21924998
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| | |||| || ||||||||||||| |||||||||    
T  21924950 taattacactgaattatttgatattctcaaattattagcagtgtcggcg 21924998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 31579240 - 31579276
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  31579240 taattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 32511681 - 32511725
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||    
T  32511681 taattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 21479164 - 21479114
Alignment:
Q  19 agtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21479164 agtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcg 21479114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 4987305 - 4987354
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4987305 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 4987354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 14979224 - 14979177
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcg 14979177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 26508155 - 26508110
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  26508155 gtaattacactgaattatgtgattttttcaaattattagctgtgtc 26508110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 28918046 - 28917997
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  28918046 gtaattacactgaattatgtgattttttcaaattattagctatgtcggcg 28917997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 34910362 - 34910313
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  34910362 gtaattacactgaattatgtgattttttcaaattattagttgtgtcggcg 34910313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 3164043 - 3164085
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcg 3164085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 7928494 - 7928448
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7928494 taattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 10954994 - 10954948
Alignment:
Q  23 attacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10954994 attacactgaattatgtgattttttcaaattattagttgtgtcggcg 10954948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 1509584 - 1509539
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  1509584 gtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 10268500 - 10268549
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  10268500 gtaattacactaaattatgtgattttttcaaattattaactgtgtcggcg 10268549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14209158 - 14209109
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  14209158 gtaattacactgaattatgtgattttttaaaattattagttgtgtcggcg 14209109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 15796308 - 15796357
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  15796308 gtaattacactgaattatatgattttttcaaattattaactgtgtcggcg 15796357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 21257000 - 21257045
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  21257000 gtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 26492219 - 26492268
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  26492219 gtaattacactgaattgtatgattttttcaaattattagctctgtcggcg 26492268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 34185137 - 34185186
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  34185137 gtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcg 34185186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 51206371 - 51206412
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  51206371 ttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 55401120 - 55401071
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  55401120 gtaattacactaaattatgtgattttttcaaattattagttgtgtcggcg 55401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 25948902 - 25948979
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtc----tcagtgtctgtgcttcatagt 94  Q
    ||||||||||||||| ||||||||||||||||||||||| || |||||  |||    || ||||||||||||||||||    
T  25948902 taattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgcttcatagt 25948979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 35994752 - 35994799
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  35994752 gtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggc 35994799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 49651800 - 49651848
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  49651800 gtaattacagtgaattatgtgattttttcaaattattagccgtgtcggc 49651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 40052367 - 40052328
Alignment:
Q  30 tgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcg 40052328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14747607 - 14747557
Alignment:
Q  20 gtaattacactgaattttgtgatttttt-caaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  14747607 gtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcg 14747557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 8587035 - 8587084
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| |||||||||||||||||| ||| ||||||||||    
T  8587035 gtaattacacttaattatgtgattttttcaaattactagatgtgtcggcg 8587084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14832144 - 14832095
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| ||| || |||||||||||||||||||||||||| ||||||    
T  14832144 gtaattacattgagttatgtgattttttcaaattattagctgtatcggcg 14832095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 20503510 - 20503461
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| |||||||||||||||| | ||||||||||    
T  20503510 gtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcg 20503461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 28812560 - 28812511
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||| ||||||||||| |||||||| ||||||||||||| ||||||||||    
T  28812560 gtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcg 28812511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 1550184 - 1550136
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| ||||    
T  1550184 taattacactgaatagtgtgattttttcaaattattagcggtgttggcg 1550136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 8383301 - 8383253
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| | ||||||| ||||||||||||| |||||||||    
T  8383301 taattacactgaattatatgattttctcaaattattagcggtgtcggcg 8383253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 25064953 - 25064905
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| |||||||||||||||| |||||| |||||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcg 25064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 27505291 - 27505243
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  27505291 gtaattacacttaattatgtgatttttaaaaattattagctgtgtcggc 27505243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 11252022 - 11251984
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagc 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  11252022 taattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 11313815 - 11313861
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 14829734 - 14829672
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    ||||||||  |||||| |||||||||| |||||||||||||||||||  |||| ||||||||||||    
T  14829734 gtaattaccatgaattatgtgattttt-caaattattagctgtgtcg--gcgtgtcagtgtctgtg 14829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 16000034 - 16000093
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||||||| ||| ||||||| |||||||||| |||||||  |||| ||||||||||||    
T  16000034 ttacactgaattatgttatttttttaaattattagttgtgtcg--gcgtgtcagtgtctgtg 16000093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 11610566 - 11610517
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||| ||||||||||| ||||||||||| ||||||||||| |||| ||||    
T  11610566 gtaactacactgaattatgtgatttttttaaattattagcggtgttggcg 11610517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 23870574 - 23870619
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||| |||||||||| | ||||||||||||||||||||| ||||||    
T  23870574 taatcacactgaattatatgattttttcaaattattagcggtgtcg 23870619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 29508488 - 29508451
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattag 58  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  29508488 taattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 3865587 - 3865619
Alignment:
Q  37 tgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||| ||||||||||||||||||||||||||||    
T  3865587 tgtggttttttcaaattattagctgtgtcggcg 3865619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    |||||||||| |||| |||||||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 9624685 - 9624641
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||| |||||| ||||||||| ||||||||||||| |||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 10318065 - 10318097
Alignment:
Q  37 tgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||| |||||||||||||||||||||||||||    
T  10318065 tgtgactttttcaaattattagctgtgtcggcg 10318097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 10690277 - 10690321
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| ||| ||||||||| |||||    
T  10690277 taattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 12704051 - 12704003
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| |||| |||| ||||||||||||  |||||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcg 12704003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 16789668 - 16789712
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcggc 16789712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 18426993 - 18426945
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| ||||| ||||||||||| ||||||||||  |||||||||    
T  18426993 taattacaccgaattatgtgattttttgaaattattagtggtgtcggcg 18426945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 25093546 - 25093498
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| |||||| |||| | |||||||||    
T  25093546 taattacactgaattgtgtgattttctcaaatcattaacagtgtcggcg 25093498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 27277853 - 27277897
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||| |||| ||||||||| ||||||||||||| |||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 34307795 - 34307839
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||| | ||||||||| ||||||||||||| |||||    
T  34307795 taattacactgaaatatgtgattttctcaaattattagcggtgtc 34307839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 55213008 - 55212960
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||| |||| |||| ||||||||||| ||||||||| ||||||||||    
T  55213008 gtaattgcactaaattatgtgattttttaaaattattaactgtgtcggc 55212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 476 - 525
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  476 gtaattacactgaattttgtgattttttcaaattattagcagtgtcggcg 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 20217 - 20168
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20217 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 20168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 51856 - 51807
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51856 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 51807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29510318 - 29510367
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29510318 gtaattatactgaattttgtgattttttcaaattattagctgtgtcggcg 29510367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 4673439 - 4673502
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||  |||| ||||||||||||    
T  4673439 gtaattacactgaattttatgattttttcaaattattatctgtgtcg--gcgtgtcagtgtctgtg 4673502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25566886 - 25566841
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  25566886 gtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 36450768 - 36450817
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  36450768 gtaattacactgaattctgtgattttttcaaattattagttgtgtcggcg 36450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 22596039 - 22595990
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  22596039 gtaattacactgaattatgttatttttttaaattattagctgtgtcggcg 22595990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 22652021 - 22651972
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  22652021 gtaattatattgaattatgtgattttttcaaattattagctgtgtcggcg 22651972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 30271305 - 30271354
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  30271305 gtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcg 30271354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 15816144 - 15816192
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  15816144 taattacactaaattatgtgattttttcaaattattagttgtgtcggcg 15816192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 18407764 - 18407716
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||    
T  18407764 gtaattacactgaattatgtgatttttttgaattattagctgtgtcggc 18407716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 41831958 - 41832002
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtcggc 41832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 8343017 - 8342970
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  8343017 gtaattacactaaattatgtgattttttcaaattattagctatgtcgg 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 8343361 - 8343314
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  8343361 gtaattacactaaattatgtgattttttcaaattattagctatgtcgg 8343314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 13436988 - 13437027
Alignment:
Q  30 tgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcg 13437027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2572070 - 2572116
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||    
T  2572070 gtaattacactaaattatgtgattttttcaaattattaggtgtgtcg 2572116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 4948697 - 4948659
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattag 58  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  4948697 gtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 4298900 - 4298949
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| | |||| ||||||||||||||||||||| |||||||||||    
T  4298900 gtaattacattaaattatgtgattttttcaaattattaactgtgtcggcg 4298949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 20873114 - 20873065
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||||||||||||||||||||| || ||||||||    
T  20873114 gtaattacactaaattatgtgattttttcaaattattatctatgtcggcg 20873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 22197756 - 22197805
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| ||||    
T  22197756 gtaattacactaaattatgtgaatttttcaaattattagctgtgttggcg 22197805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 30077401 - 30077442
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctg 61  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30077401 gtaattacactgaattatgtgatgttttcaaattattagctg 30077442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 31557041 - 31556993
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  31557041 gtaattacactgaattatgtgattttt-caaattattaactgtgtcggcg 31556993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 34897129 - 34897084
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  34897129 taattacactgaattatgtgattttctcaaattattagcggtgtcg 34897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 11927101 - 11927149
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||| | |||||||||    
T  11927101 taattacactgaattatgtgattttatcaaattattaacagtgtcggcg 11927149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 13844611 - 13844659
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| ||||||||| ||||||||||||| |||||||||    
T  13844611 taattacactcaattatgtgattttctcaaattattagcagtgtcggcg 13844659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 24362217 - 24362265
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||| | ||||||||||||| |||||||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcg 24362265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 25192362 - 25192410
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||||||| ||| | |||||||||||||||||||||||||||    
T  25192362 taattatactgaattatgtcactttttcaaattattagctgtgtcggcg 25192410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 31236592 - 31236640
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||| |||||| ||||||||| ||||||||||||| |||||||||    
T  31236592 taattacattgaattatgtgattttctcaaattattagcagtgtcggcg 31236640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 39954294 - 39954342
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| ||||||||| ||||||||||||| |||||||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcg 39954342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 24613565 - 24613519
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  24613565 gtaattacacttaattatgtgattttt-caaattattagctgtgtcgg 24613519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 41838144 - 41838183
Alignment:
Q  27 cactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcg 41838183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 3025595 - 3025557
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagc 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  3025595 taattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 4611578 - 4611532
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 27101553 - 27101511
Alignment:
Q  27 cactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||| |||| ||||||||||||||||||||||| |||||||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcg 27101511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 5813633 - 5813588
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||| || | ||||| |||||||||||||||||||||||||||    
T  5813633 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcg 5813588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 14134743 - 14134706
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattag 58  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  14134743 taattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 21465457 - 21465412
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||  ||||| | |||||||||||||||||||||||||||    
T  21465457 gtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 24196627 - 24196660
Alignment:
Q  36 ttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||||||||| ||||||||||    
T  24196627 ttgtgattttttcaaattattagttgtgtcggcg 24196660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 27213591 - 27213538
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtct 74  Q
    |||||||| |||||| ||||||||| | ||||||||||| ||||||||| ||||    
T  27213591 taattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtct 27213538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 36934714 - 36934669
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||| |||||| |||||||||||| |||||||||| ||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcg 36934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 40332236 - 40332191
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| ||||||||| |||||||||| || |||||    
T  40332236 gtaattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 7658507 - 7658459
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattagtggtgtcggcg 7658459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 11944709 - 11944661
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||| || ||||||||| ||||||||||| | |||||||||    
T  11944709 taattacactgagttatgtgattttatcaaattattaacagtgtcggcg 11944661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 14731756 - 14731712
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||| |||| ||||||||| ||||||||||||| |||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 35519833 - 35519865
Alignment:
Q  32 aattttgtgattttttcaaattattagctgtgt 64  Q
    |||| ||||||||||||||||||||||||||||    
T  35519833 aattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 24339687 - 24339638
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24339687 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 24339638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 25481947 - 25481898
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25481947 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 25481898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 13770736 - 13770687
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  13770736 gtaattacactgaattatgtaatttttttaaattattagctgtgtcggcg 13770687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 26033475 - 26033516
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctg 61  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  26033475 gtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 7438751 - 7438703
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  7438751 gtaattacattgaattatgtgattttttcaaattattaactgtgtcggc 7438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 29787384 - 29787432
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcg 29787432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 3991369 - 3991322
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  3991369 gtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 11061090 - 11061137
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  11061090 gtaattatactaaattatgtgattttttcaaattattagctgtgtcgg 11061137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 32308163 - 32308116
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcg 32308116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 35862007 - 35861960
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  35862007 aattacattgaattatgtgattttttcaaattattagttgtgtcggcg 35861960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 5409850 - 5409892
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgt 62  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  5409850 gtaattgcactgaattatgtgattttttcaaattattagctgt 5409892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 9778545 - 9778500
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||    
T  9778545 gtaattatactgaattatgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 18215200 - 18215249
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||| ||||||| ||| ||||||||||||||||||||||||| |||||||    
T  18215200 gtaactacactgcattatgtgattttttcaaattattagctgcgtcggcg 18215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 23191941 - 23191892
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| | ||||||||| ||||||||||||| |||||||||    
T  23191941 gtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcg 23191892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 24105723 - 24105674
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||  ||  |||||||||||||||||||||||||||||    
T  24105723 gtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcg 24105674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 11665455 - 11665499
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||    
T  11665455 taattagactgaattatgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 19992045 - 19992001
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  19992045 taattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 8234191 - 8234144
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||||||||    
T  8234191 gtaactacactgaattatgttattttttcaaattattagttgtgtcgg 8234144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 9408348 - 9408395
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  9408348 gtaattacactaaattatgtgattttttcaaattattaattgtgtcgg 9408395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 30731080 - 30731033
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcg 30731033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagc 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 11831477 - 11831431
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||||    
T  11831477 gtaattacactaaattatatgattttttcaaattattagttgtgtcg 11831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 13300455 - 13300417
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattag 58  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  13300455 gtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 20549835 - 20549789
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||  |||||||| ||||||||||||| |||||||    
T  20549835 taattacactgaattacgtgattttctcaaattattagcggtgtcgg 20549789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25822700 - 25822646
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtct 74  Q
    |||||||||||||||| ||   ||||||||||||||||| |||||||||| ||||    
T  25822700 gtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtct 25822646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 43027487 - 43027529
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||    
T  43027487 ttacactgcattatgtgattttttcaaattattagctgggtcg 43027529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7197311 - 7197360
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| ||||||   ||||||||| |||||||||||||||||||||    
T  7197311 gtaattacattgaattaaatgatttttttaaattattagctgtgtcggcg 7197360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 26733348 - 26733303
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  26733348 taattagactgaattatgtgattttgtcaaattattagcggtgtcg 26733303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 27945086 - 27945037
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||| ||||||||||||  |||||||||    
T  27945086 gtaattacactgaattatgtaattttctcaaattattagtggtgtcggcg 27945037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 28155615 - 28155566
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| ||||| ||| ||||| ||||||||||||| |||||||||    
T  28155615 gtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcg 28155566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32094034 - 32094079
Alignment:
Q  20 gtaattacactgaattttgtga-ttttttcaaattattagctgtgt 64  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||    
T  32094034 gtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 11272600 - 11272651
Alignment:
Q  20 gtaattacactgaatttt--gtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |  |||||||||||||||||| || ||||||||||    
T  11272600 gtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcg 11272651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 11890934 - 11890970
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| | |||||||||||||||||||    
T  11890934 taattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 15680853 - 15680805
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| |||||||||||  ||||||||||| ||||||||    
T  15680853 taattacactaaattatgtgattttttttaattattagctatgtcggcg 15680805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 19206094 - 19206046
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| | |||||| ||||||||| ||||||||||||| |||||||||    
T  19206094 taattataatgaattatgtgattttctcaaattattagcggtgtcggcg 19206046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 22868086 - 22868038
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||| ||||||||  |||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcg 22868038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 42720905 - 42720949
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||| | |||| ||||||||||||||||||||||| |||||    
T  42720905 taattacatttaattatgtgattttttcaaattattagcggtgtc 42720949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 113344 - 113295
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  113344 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggcg 113295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 5898281 - 5898343
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||  |||||||||||||||||    
T  5898281 taattacactgaattatgtgattttttcagattattagcggtgtcg--gcgtctcagtgtctgtg 5898343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 31015088 - 31015035
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtc 73  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  31015088 gtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtc 31015035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 42359463 - 42359508
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42359463 gtaattacactgaattttgtgattttttcaaattattagatgtgtc 42359508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 398780 - 398828
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcg 398828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 1486724 - 1486768
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  1486724 taattacactgaattatgtgattttttcaaattattagctgtgtc 1486768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 12443476 - 12443523
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcg 12443523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 31672909 - 31672956
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  31672909 gtaattacactgaattaagtgattttttcaaattattagctgtgtcgg 31672956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16297297 - 16297343
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  16297297 gtaattacactgaattttgtgattttttcatattatttgctgtgtcg 16297343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 22515901 - 22515972
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtgcttcatag 93  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||   |||| || ||||| |||||||||||    
T  22515901 gtaattacactaaattatgtgattttttcaaattattagctgtgtc--tgcgtgtccgtgtccgtgcttcatag 22515972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 23738722 - 23738676
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 38078675 - 38078721
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  38078675 gtaattacattgaattatgtgattttttcaaattattagctgtgtcg 38078721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 22881630 - 22881679
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  22881630 gtaattacactaaattatgtgattttttcaaattattagttgtgtcggcg 22881679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 24577200 - 24577245
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  24577200 gtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 46348397 - 46348446
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  46348397 gtaattacactaaattatatgattttttcaaattattagctgtgtcggcg 46348446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 36878505 - 36878457
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcg 36878457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 37598875 - 37598828
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  37598875 taattacactgaattt-gtgattttttcaaattattagttgtgtcggcg 37598828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 1705006 - 1705053
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  1705006 gtaattaccctgaattatgtgattttttcaaattattagatgtgtcgg 1705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 21378623 - 21378576
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  21378623 gtaattacactgaattatgtaattttttcaatttattagctgtgtcgg 21378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 40258947 - 40258994
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||    
T  40258947 gtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 1864895 - 1864941
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  1864895 taattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 40917794 - 40917747
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  40917794 gtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcg 40917747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 6612185 - 6612234
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| ||||||    
T  6612185 gtaattacactgaattatgtaattttttcaaattattaactgtatcggcg 6612234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 13011229 - 13011278
Alignment:
Q  20 gtaattacactgaattttgtgatttt-ttcaaattattagctgtgtcggc 68  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  13011229 gtaattacacttaattatgtgatttttttcaaattattagctgtgtcggc 13011278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14359536 - 14359584
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  14359536 gtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcg 14359584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18190122 - 18190167
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||    
T  18190122 gtaattacactgaattatgtaattttttcaaattattaggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 18556470 - 18556519
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| | |||| |||||| ||||||||||||||||||||||||||    
T  18556470 gtaattacattaaattatgtgatattttcaaattattagctgtgtcggcg 18556519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 19058870 - 19058919
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| || |||| |||||||||||||||||||||    
T  19058870 gtaattacactgaattatgttatctttttaaattattagctgtgtcggcg 19058919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 48450601 - 48450650
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||| ||||    
T  48450601 gtaattacactaaattatgttattttttcaaattattagctgtgttggcg 48450650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 51410070 - 51410021
Alignment:
Q  20 gtaattacactgaattttgtgatt-ttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  51410070 gtaattacactgaattatgtgatttttttcaaattattagatgtgtcggc 51410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 1262928 - 1262880
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| | |||||| ||||||||| |||||||||||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcg 1262880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 2896140 - 2896184
Alignment:
Q  25 tacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcg 2896184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 5944327 - 5944263
Alignment:
Q  21 taattacactgaattttgtgatttttt--caaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    ||||||||||||||| |||||||||||  |||||||||||||||| ||  |||| ||||||||||||    
T  5944327 taattacactgaattatgtgattttttttcaaattattagctgtggcg--gcgtgtcagtgtctgtg 5944263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 18337374 - 18337338
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattatt 56  Q
    |||||||||||||||| ||||||||||||||||||||    
T  18337374 gtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 40181915 - 40181871
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||    
T  40181915 taattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 9828087 - 9828040
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcg 9828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 16927200 - 16927239
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagct 60  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagct 16927239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 17754352 - 17754309
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagcggtgtcgg 17754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 23653040 - 23652997
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||| | |||||||||||||||||||||||| ||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcgg 23652997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 25098570 - 25098617
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtcggc 25098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 32434730 - 32434777
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||| |||||| ||||| |||||||||||||||| ||||||||    
T  32434730 gtaattacaatgaattatgtgactttttcaaattattagttgtgtcgg 32434777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 9103682 - 9103636
Alignment:
Q  23 attacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  9103682 attaaactaaattatgtgattttttcaaattattaactgtgtcggcg 9103636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 17831548 - 17831594
Alignment:
Q  23 attacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||  ||||||||| ||||||||||||| |||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcg 17831594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 23705489 - 23705519
Alignment:
Q  29 ctgaattttgtgattttttcaaattattagc 59  Q
    |||||||||||||||||||||||||||||||    
T  23705489 ctgaattttgtgattttttcaaattattagc 23705519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 34298480 - 34298434
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcgg 34298434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 47989542 - 47989480
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||||||||||| ||||||||||| |||||||||  |||||||  |||| ||||||||||||    
T  47989542 gtaattacactgaattatgtgatttttttaaattatta-ttgtgtcg--gcgtgtcagtgtctgtg 47989480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 1815302 - 1815253
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||| |||| ||||  ||||||||||    
T  1815302 gtaattacactgaattatgtgattttttaaaataattatttgtgtcggcg 1815253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 6332715 - 6332671
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||    
T  6332715 gtaattacactgaattatgtga-tttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 7918226 - 7918263
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattag 58  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  7918226 taattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 18471345 - 18471297
Alignment:
Q  20 gtaattacactgaattttgtgatttttt--caaattattagctgtgtcg 66  Q
    ||||||| |||||||| |||||||||||  |||||||||||||||||||    
T  18471345 gtaattatactgaattatgtgattttttttcaaattattagctgtgtcg 18471297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 19324606 - 19324561
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||||||| ||||||||| ||||||||| ||| ||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcg 19324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 28273102 - 28273147
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| | |||||||||||||| ||||| ||||||    
T  28273102 gtaattacactgaattatatgattttttcaaatgattagttgtgtc 28273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29144372 - 29144421
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||| ||| | |  ||||||||||||||||||||||||||||    
T  29144372 gtaattacactgcattatctatttttttcaaattattagctgtgtcggcg 29144421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 32461477 - 32461526
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| | |||| |||||||||||||||||||||| |||| |||||    
T  32461477 gtaattacattaaattatgtgattttttcaaattattagttgtgccggcg 32461526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 41877484 - 41877533
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||| ||||| ||||||||||||| |||||||||    
T  41877484 gtaattacactaaattatgtaattttctcaaattattagcggtgtcggcg 41877533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 5376515 - 5376563
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||| ||||| | ||||||||||| |||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcggtgtcggcg 5376563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 6427394 - 6427346
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||| |||||| ||||||||| ||||||||||||| |||| ||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcg 6427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 10572604 - 10572652
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| ||||| ||||||||| ||||||||||||  |||||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtgtcggcg 10572652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 10577750 - 10577798
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||||||||||| | |||  ||||||||||||||||    
T  10577750 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcg 10577798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 13436502 - 13436454
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||  | ||||||||||| |||||||||    
T  13436502 taattacactgaattatgtgatttccttaaattattagcagtgtcggcg 13436454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 13997927 - 13997879
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||||| |||| |||| | |||||||||    
T  13997927 taattacactgaattatgtgatttttttaaataattaacggtgtcggcg 13997879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 15323206 - 15323166
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgt 62  Q
    ||||||||| |||| ||||||||||||||||||||| ||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaactgt 15323166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 17778577 - 17778549
Alignment:
Q  37 tgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||||||||||||||||    
T  17778577 tgtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 19562636 - 19562684
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||| | || |||||| ||||||||||||| |||||||||    
T  19562636 taattacactgaactatgagattttctcaaattattagcagtgtcggcg 19562684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 21366039 - 21366083
Alignment:
Q  25 tacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||| ||||||| ||||||||||||||| |||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcg 21366083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 25361930 - 25361882
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||| ||  |||||||||    
T  25361930 taattacactgaattatgtgattttctcaaattatcagtggtgtcggcg 25361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 26238129 - 26238173
Alignment:
Q  23 attacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||| ||| ||||| ||||||||||||| |||||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 35702602 - 35702650
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||||| |||| | |||  |||||||||||||||||||||||||    
T  35702602 gtaattacacttaattatttgaagttttcaaattattagctgtgtcggc 35702650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 21191070 - 21191118
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21191070 gtaattacactgaattatgtgattttttcaaattattagctgtgtcggc 21191118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 6247667 - 6247618
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  6247667 gtaattacactgaattatgtgattttttcaaattattagatgtgtcggcg 6247618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14674314 - 14674265
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  14674314 gtaattacactaaattatgtgattttttcaaattattagctgtgtcggcg 14674265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 21576759 - 21576808
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  21576759 gtaattacactgaattatgtgattttttcaaattattagctgtgttggcg 21576808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 31084368 - 31084319
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  31084368 gtaattacattgaattatgtgattttttcaaattattagctgtgtcggcg 31084319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 39698586 - 39698541
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  39698586 gtaattacactgaattatgtgattttttcaaattattagctgtgtc 39698541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 7677749 - 7677677
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtgcttcatag 93  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||  ||| || || || |||||||||||    
T  7677749 taattgcactgaattatgtgattttttcaaattattagctgtgtcggtccgtgtccgtttccgtgcttcatag 7677677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 37328858 - 37328905
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  37328858 gtaattacactgaattttgtgatttttacaaattatttgctgtgtcgg 37328905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 42893405 - 42893358
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  42893405 gtaattacactggattatgtgattttttcaaattattagctgtgtcgg 42893358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 17177037 - 17177086
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||||    
T  17177037 gtaattacaatgaattttttgattttttcaaattattagctgtgttggcg 17177086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21522795 - 21522746
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  21522795 gtaattacactgaattatgttattttttaaaattattagctgtgtcggcg 21522746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21533361 - 21533312
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  21533361 gtaattacactgaattatgttattttttaaaattattagctgtgtcggcg 21533312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 3966547 - 3966500
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  3966547 taattacactgaattgtgtgattttctcaaattattagcggtgtcggc 3966500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 41633780 - 41633733
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||    
T  41633780 gtaattacactgaattatgtaaatttttcaaattattagctgtgtcgg 41633733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 13287417 - 13287459
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  13287417 ttacactgaattatgtgattttttcaaattattatctgtgtcg 13287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 43001845 - 43001799
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  43001845 gtaattacactgaattatgtaattttttcaaattattagcagtgtcg 43001799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 8420072 - 8420023
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  8420072 gtaattacattgaattatgttattttttcaaattattagctatgtcggcg 8420023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 19579746 - 19579697
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||||||    
T  19579746 gtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcg 19579697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 24906315 - 24906364
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  24906315 gtaattacactgaattatgtcattttttcaaattattatctgtgttggcg 24906364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 27932280 - 27932231
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||| ||||||||||||| |||||||||    
T  27932280 gtaattacactgaattatgtaattttctcaaattattagcggtgtcggcg 27932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 33178070 - 33178021
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||||||||    
T  33178070 gtaattacactaaattatgtgatttttttaaattattagttgtgtcggcg 33178021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 41995515 - 41995453
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||| |||||| |||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcg--gcgtgtcagtgtctgtg 41995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 6471904 - 6471948
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||    
T  6471904 taattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 19552562 - 19552606
Alignment:
Q  25 tacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcg 19552606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 22013458 - 22013410
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcg 22013410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 28588689 - 28588737
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||| | |||||||||    
T  28588689 taattacactgaattatgtgattttctcaaattattaccggtgtcggcg 28588737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 21351919 - 21351966
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| ||||| |||||| ||||||||| ||||||||    
T  21351919 gtaattacactgaattatgtgactttttccaattattagttgtgtcgg 21351966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 7218281 - 7218327
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| |||||||| || |||||||||||| |||||    
T  7218281 gtaattacactgaattatgtgatttatttaaattattagctctgtcg 7218327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15884033 - 15883983
Alignment:
Q  20 gtaattacactgaattttgtgatt-ttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  15884033 gtaattacactgaattatgtgattttttttaaattatttgctgtgtcggcg 15883983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 34276916 - 34276870
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||||| ||||||| | ||||||||| |||||||||    
T  34276916 taattacactgaattttatgattttcttaaattattaactgtgtcgg 34276870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 10298614 - 10298565
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| || ||| ||||| |||||||||||||||| ||||||||||    
T  10298614 gtaattacattgtattatgtgactttttcaaattattagttgtgtcggcg 10298565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 15405069 - 15405114
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||| |||||| | |||||||||||||||||||| ||||||    
T  15405069 gtaattacattgaattatatgattttttcaaattattagttgtgtc 15405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 27144507 - 27144445
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||||| |||| ||||||||  ||||||||||||| ||||||  |||| ||||||||||||    
T  27144507 taattacactaaattatgtgatttcctcaaattattagcggtgtcg--gcgtgtcagtgtctgtg 27144445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 40131665 - 40131628
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattag 58  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  40131665 taattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 4105304 - 4105253
Alignment:
Q  20 gtaattacactgaattttgtgat--tttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||  |||||||||||||||| | ||||||||    
T  4105304 gtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcg 4105253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 5467993 - 5468029
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  5467993 taattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15382524 - 15382473
Alignment:
Q  20 gtaattacactgaattttgtgatttttt--caaattattagctgtgtcggcg 69  Q
    ||||||| |||||||| | |||||||||  ||||||||||||||||||||||    
T  15382524 gtaattatactgaattatatgattttttttcaaattattagctgtgtcggcg 15382473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21542075 - 21542027
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||| || |||| |||||||||| |||||||||    
T  21542075 gtaattacactgaattatgttatctttttaaattattagttgtgtcggc 21542027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 21814305 - 21814257
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||||||||||| | |||  ||||||||||||||||    
T  21814305 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcg 21814257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 22611761 - 22611805
Alignment:
Q  30 tgaattttgtgattttttcaaattattagctgtgtcggcgcgtct 74  Q
    |||||| ||||||||||||||||||||||  ||||||||| ||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgtgtct 22611805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 24273045 - 24273089
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| |||||||| || |||||||    
T  24273045 taattacactgaattatgtgattttctcaaattaataactgtgtc 24273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 24389169 - 24389125
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| |||||||| || |||||||    
T  24389169 taattacactgaattatgtgattttctcaaattaataactgtgtc 24389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 41091272 - 41091316
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| |||||| |||||| |||||    
T  41091272 taattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 33377 - 33431
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtct 74  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  33377 gtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtct 33431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14575 - 14526
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  14575 gtaattacactgaattatgtgattttttcaaattattagttgtgtcggcg 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 46727 - 46678
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  46727 gtaattacactgaattatgtgattttttcaaattattaactgtgtcggcg 46678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 23293000 - 23293049
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  23293000 gtaattatactgaattatgtgattttttcaaattattagctgtgtcggcg 23293049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 3947780 - 3947828
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||    
T  3947780 gtaattacactgaattatgcgattttttcaaattattagctgtgtcggc 3947828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21945548 - 21945500
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  21945548 gtaattacactgaattatgtcattttttcaaattattagctgtgtcggc 21945500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 11596366 - 11596415
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  11596366 gtaattacactgaattatgtgattttttcaaattattagctttgttggcg 11596415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 28964262 - 28964307
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  28964262 gtaattacactgaattatgtgattttttcaaattattagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 49431070 - 49431021
Alignment:
Q  21 taattacactgaattttgtgatttttt-caaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  49431070 taattacactgaattatgtgatttttttcaaattattagctgtgtcggcg 49431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29205489 - 29205445
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgt 64  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  29205489 gtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 54580038 - 54580082
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  54580038 taattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 38847026 - 38847073
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||    
T  38847026 gtaattacactgaataatatgattttttcaaattattagctgtgtcgg 38847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 2361990 - 2362036
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||    
T  2361990 taattacactaaattatgtaattttttcaaattattagctgtgtcgg 2362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 8423733 - 8423779
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  8423733 taattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 19482713 - 19482650
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    |||||||||| ||||| |||||| ||||||||||||||| |||||||  |||| ||||||||||||    
T  19482713 gtaattacaccgaattatgtgatattttcaaattattagttgtgtcg--gcgtgtcagtgtctgtg 19482650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 30298992 - 30298942
Alignment:
Q  20 gtaattacactgaattttgtgatttttt-caaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  30298992 gtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcg 30298942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 30327860 - 30327810
Alignment:
Q  20 gtaattacactgaattttgtgatttttt-caaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  30327860 gtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcg 30327810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 12895130 - 12895179
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||  |||||| |||||||||||||||||||||||||| ||||||    
T  12895130 gtaattactttgaattatgtgattttttcaaattattagctgtttcggcg 12895179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 51701303 - 51701258
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||    
T  51701303 gtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 715621 - 715669
Alignment:
Q  20 gtaattacactgaattttgtga-ttttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  715621 gtaattacactgaattatgtgattttttttaaattattagctgtgtcgg 715669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 752947 - 752995
Alignment:
Q  20 gtaattacactgaattttgtga-ttttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  752947 gtaattacactgaattatgtgattttttttaaattattagctgtgtcgg 752995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 14465089 - 14465133
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgt 64  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||    
T  14465089 gtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 15029809 - 15029765
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||    
T  15029809 taattacactgaattatgtgatattttcaaattattagcagtgtc 15029765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 24999088 - 24999044
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||    
T  24999088 taattacactgaattgtgtgattttttcaaattatcaactgtgtc 24999044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 40613494 - 40613446
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  40613494 taattacactgaattatgtgattttctcaaaatattagcggtgtcggcg 40613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 11651155 - 11651194
Alignment:
Q  27 cactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcg 11651194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 50280920 - 50280877
Alignment:
Q  26 acactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||| |||| ||||| |||||||||||||||||||||||||||    
T  50280920 acacttaattatgtgaatttttcaaattattagctgtgtcggcg 50280877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 13783325 - 13783279
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||||||||| || |||||| |||||| |||||||    
T  13783325 taattacactgaattttgtgatcttctcaaataattagcggtgtcgg 13783279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 28084567 - 28084517
Alignment:
Q  20 gtaattacactgaattttgtgatttttt-caaattattagctgtgtcggcg 69  Q
    ||||||||| |||||| ||||||||||| |||||| |||||||||||||||    
T  28084567 gtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcg 28084517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 42640574 - 42640522
Alignment:
Q  20 gtaattacactgaattttgtgatttttt---caaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||||   |||||||| |||||||||||||    
T  42640574 gtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcg 42640522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 47264031 - 47263985
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||| ||||| |||||||||| ||||||||||||| |||||    
T  47264031 gtaattacacagaattatgtgatttttacaaattattagctatgtcg 47263985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 6485625 - 6485662
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  6485625 gtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 22440615 - 22440660
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||    
T  22440615 taattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 36635368 - 36635331
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattag 58  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 37203309 - 37203264
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||    
T  37203309 gtaattacactaaattatgtcattttttcaaattattagccgtgtc 37203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 40481681 - 40481633
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| ||||||    
T  40481681 gtaattacactgaattatgtga-tttttcaaattattagttgtatcggcg 40481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 903966 - 903930
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 4672104 - 4672148
Alignment:
Q  25 tacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||| |||||  ||||||||||||||||||||||    
T  4672104 tacactgaattatgtaattttcccaaattattagctgtgtcggcg 4672148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 5414187 - 5414235
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| ||||||||||||| | |||  ||||||||||||||||    
T  5414187 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcg 5414235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 12895289 - 12895337
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||  |||| |||||||||||||||||||||  ||||||||||    
T  12895289 taattacacaaaattatgtgattttttcaaattattatttgtgtcggcg 12895337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 14126126 - 14126174
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||| ||| ||||||||||| | |||||||||    
T  14126126 taattacactgaattatgtgactttatcaaattattaacagtgtcggcg 14126174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 16189753 - 16189682
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtgcttcatag 93  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||| ||| ||| || || || |||||||||||    
T  16189753 taattacactgaattatgtgattttctcaaatttttagcggtgttggc-cgtgtccgtatccgtgcttcatag 16189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 22234906 - 22234954
Alignment:
Q  22 aattacactgaattttgtga-ttttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||| ||||| |||||||||||| ||||| |||||||||    
T  22234906 aattacactgaattatgtgatttttttcaaatttttagcggtgtcggcg 22234954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 24343551 - 24343503
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||| ||||| ||||||||||| | |||||||||    
T  24343551 taattacactgaattatgtaattttctcaaattattatccgtgtcggcg 24343503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 35158000 - 35158048
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| |||||||||| ||||||||||| || |||||||    
T  35158000 taattacactaaattatgtgatttttccaaattattagttgcgtcggcg 35158048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 38148741 - 38148785
Alignment:
Q  22 aattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40179651 - 40179687
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  40179651 taattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 56257977 - 56257933
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| | ||||||| ||||||||||||| |||||    
T  56257977 taattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 21374713 - 21374762
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  21374713 gtaattacactgaattatgtaattttttcaaattattagctgtgtcggcg 21374762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 28677953 - 28677905
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcg 28677905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 30717544 - 30717591
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  30717544 gtaattacactgaattatgtgattttttcaaattattagctttgtcgg 30717591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 2438733 - 2438778
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  2438733 gtaattacactgaattatgtgattttttgaaattattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 30404864 - 30404913
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  30404864 gtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcg 30404913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37419788 - 37419739
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  37419788 gtaattacactgaattttgtgattttttcaaattatttgccatgtcggcg 37419739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37559022 - 37558973
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  37559022 gtaattacattgaattatgtgatttttacaaattattagctgtgtcggcg 37558973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 38117173 - 38117222
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  38117173 gtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcg 38117222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 21616806 - 21616758
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcg 21616758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 21782833 - 21782881
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcg 21782881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 24894433 - 24894385
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcg 24894385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 11223877 - 11223931
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtct 74  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||| ||| ||||    
T  11223877 gtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtct 11223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 19536411 - 19536461
Alignment:
Q  20 gtaattacactgaattttgtga-ttttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  19536411 gtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcg 19536461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 20539688 - 20539734
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  20539688 gtaattacactaaattatatgattttttcaaattattagctgtgtcg 20539734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 12940949 - 12940994
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||    
T  12940949 gtaattacactgaattatatgattttttcaaattattagttgtgtc 12940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15657909 - 15657860
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||||||| ||||||||||| || |||||||    
T  15657909 gtaattacactgaattatgtgatttttacaaattattagttgagtcggcg 15657860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15972918 - 15972869
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| |||||||||||||||||  ||||||||||    
T  15972918 gtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcg 15972869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 30335462 - 30335413
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||||||    
T  30335462 gtaattacactaaattatgtcattttttcaaattattagttgtgtcggcg 30335413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 12668438 - 12668486
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||| |||||||||||||||||| | ||||||||    
T  12668438 taattacactgaattatgtcattttttcaaattattagttatgtcggcg 12668486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 18276565 - 18276518
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||  |||||||| ||||||||||||| ||||||||    
T  18276565 taattacactgaattaagtgattttctcaaattattagcggtgtcggc 18276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 36409642 - 36409689
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||| |||| ||||||||||||||||||| ||| ||||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggc 36409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 37411259 - 37411306
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||| |||||||||| ||||||||| ||||||||||||| ||||||||    
T  37411259 taatcacactgaattatgtgattttctcaaattattagcggtgtcggc 37411306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 974792 - 974746
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||  |||||| ||||||||||||||| |||||||    
T  974792 gtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 1328022 - 1327976
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||| |||||||||| ||||||| ||||||||||||| |||||||    
T  1328022 taattatactgaattttatgattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 23718070 - 23718024
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||| ||| ||||||||||||| |||||||    
T  23718070 taattacactgaattatgtgactttctcaaattattagcggtgtcgg 23718024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 24105742 - 24105696
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||| ||| ||||||||||||| |||||||    
T  24105742 taattacactgaattatgtgactttctcaaattattagcggtgtcgg 24105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 31808121 - 31808075
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||||    
T  31808121 taattacactgaattatgtgattttgttaaattattagcggtgtcgg 31808075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 39323309 - 39323263
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  39323309 gtaattacactgaattatgtaattttgtcaaattattagcggtgtcg 39323263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 6940300 - 6940251
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||| ||| | ||||| |||||||||||||||||||||    
T  6940300 gtaattacacttaattatgtaactttttaaaattattagctgtgtcggcg 6940251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 14996237 - 14996286
Alignment:
Q  20 gtaattacactgaattttgtgatttt-ttcaaattattagctgtgtcggc 68  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||||||    
T  14996237 gtaattacactaaattatatgatttttttcaaattattagctgtgtcggc 14996286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 18422008 - 18421959
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| |||||| |||| |||||||||  ||||||||||    
T  18422008 gtaattacactgaattatgtgatatttttaaattattaattgtgtcggcg 18421959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18841027 - 18841072
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  18841027 gtaattacacttaattatgtaattttttcaaattattagttgtgtc 18841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 33153469 - 33153420
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||| ||||||    
T  33153469 gtaattacactgaattatgtgatttttttaaatcattagatgtttcggcg 33153420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 36756359 - 36756404
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||||||| ||| |||| ||||||||||||| |||||||    
T  36756359 taattacactgaattatgttatttcttcaaattattagttgtgtcg 36756404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 16069269 - 16069317
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| | ||||||||| ||||||||| | |||||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcg 16069317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 20473367 - 20473319
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| | ||| ||||| |||||||||| |||||||||    
T  20473367 gtaattacactgaattatatgagttttttaaattattagttgtgtcggc 20473319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 27460070 - 27460022
Alignment:
Q  22 aattacactgaattttgtgatttttt-caaattattagctgtgtcggcg 69  Q
    ||||| |||||||| ||| ||||||| ||||||||||||||||||||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgtcggcg 27460022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 28412394 - 28412358
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 29176508 - 29176552
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| |||||  |||||||||||||| |||||||    
T  29176508 taattacactgaattatgtgaccttttcaaattattaactgtgtc 29176552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 31284092 - 31284044
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||| || ||| ||||||||| ||||||||||||| |||||||||    
T  31284092 taattacaatggattatgtgattttctcaaattattagcagtgtcggcg 31284044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 35449557 - 35449521
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattatta 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  35449557 taattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 44860364 - 44860320
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| || |||||| ||||||||||||| |||||    
T  44860364 taattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 71771 - 71719
Alignment:
Q  19 agtaattacactgaattttgtgatttttt--caaattattagctgtgtcggcg 69  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  71771 agtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcg 71719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 130527 - 130479
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  130527 gtaattacactgaattatgtgattttttcaaactattaactgtgtcggc 130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 241638 - 241590
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  241638 taattacactaaattatgtgatttttccaaattattagctgtgtcggcg 241590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 178832 - 178882
Alignment:
Q  20 gtaattacactgaattttg-tgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  178832 gtaattacactgaattatgatgattttttcaaattattagttgtgtcggcg 178882  T

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Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 13445 - 13396
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||||    
T  13445 gtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcg 13396  T

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Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 21882 - 21931
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||||    
T  21882 gtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcg 21931  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 8054 - 8001
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtct 74  Q
    ||||||||||| ||| | |||||||||||||||||||| |||||||||| ||||    
T  8054 taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtct 8001  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 8843 - 8794
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||||||    
T  8843 gtaattacactaaataatatgattttttcaaattattagctgtgtcggcg 8794  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 70322 - 70277
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  70322 taattacactgaattatgttattttttcaaattattaactgtgtcg 70277  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 17763 - 17808
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  17763 gtaattacactaaattatgtgattttttcaaattattagttgtgtc 17808  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 92852 - 92803
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||| ||||| ||||||||||||| |||||||||    
T  92852 gtaattacactgaattatgtaattttctcaaattattagcggtgtcggcg 92803  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 4897 - 4945
Alignment:
Q  20 gtaattacactgaattttgtga-ttttttcaaattattagctgtgtcgg 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  4897 gtaattacactgaattatgtgattttttttaaattattagctgtgtcgg 4945  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 7326 - 7374
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||| |||| |||||||||| ||||||||||| ||||||||||    
T  7326 taattacactaaattatgtgatttttccaaattattagttgtgtcggcg 7374  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 3863 - 3911
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    |||||||||||||||| ||||||||||| ||||||||| | ||||||||    
T  3863 gtaattacactgaattatgtgatttttttaaattattaaccgtgtcggc 3911  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 1076 - 1033
Alignment:
Q  24 ttacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagcggtgtcgg 1033  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 7046 - 7092
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcg 66  Q
    ||||||| ||| |||| ||| ||||||||||||||||||||||||||    
T  7046 gtaattatactaaattatgtaattttttcaaattattagctgtgtcg 7092  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 135327 - 135373
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcgg 67  Q
    ||||||||| ||||| ||||||||| ||||||||||||| |||||||    
T  135327 taattacacagaattatgtgattttctcaaattattagcagtgtcgg 135373  T

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Target: scaffold0246 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 19620 - 19572
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| ||||||    
T  19620 gtaattacactgaattatgtga-tttttcaaattattagttgtatcggcg 19572  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 23464 - 23402
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgcgtctcagtgtctgtg 85  Q
    ||||||||||||||| |||||||||||  | |||||| ||||||||  |||| ||||||||||||    
T  23464 taattacactgaattatgtgatttttttgagttattatctgtgtcg--gcgtgtcagtgtctgtg 23402  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8649 - 8697
Alignment:
Q  20 gtaattacactgaattttgtgattttttcaaattattagctgtgtcggc 68  Q
    ||||||| || ||||| |||||| ||||||||||||||| |||||||||    
T  8649 gtaattataccgaattatgtgatattttcaaattattagttgtgtcggc 8697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 44540 - 44584
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtc 65  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||||    
T  44540 taattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 53224 - 53176
Alignment:
Q  21 taattacactgaattttgtgattttttcaaattattagctgtgtcggcg 69  Q
    ||||||||||||||| ||||||||| |||||||||| || || ||||||    
T  53224 taattacactgaattatgtgattttctcaaattattggcggtatcggcg 53176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 23815 - 23771
Alignment:
Q  20 gtaattacactgaattttgtgatt-ttttcaaattattagctgtg 63  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||    
T  23815 gtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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