View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2071_low_54 (Length: 358)

Name: NF2071_low_54
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2071_low_54
NF2071_low_54
[»] chr8 (8 HSPs)
chr8 (19-276)||(35889618-35889881)
chr8 (298-341)||(35889562-35889605)
chr8 (185-237)||(37117539-37117591)
chr8 (187-238)||(10732792-10732843)
chr8 (187-238)||(33445563-33445614)
chr8 (161-238)||(32232368-32232445)
chr8 (172-224)||(33555437-33555489)
chr8 (184-216)||(44037379-44037411)
[»] chr1 (4 HSPs)
chr1 (188-238)||(35308178-35308228)
chr1 (172-237)||(32998899-32998964)
chr1 (185-237)||(27853349-27853401)
chr1 (183-239)||(50595896-50595952)
[»] chr5 (6 HSPs)
chr5 (172-236)||(20175720-20175784)
chr5 (161-220)||(176064-176122)
chr5 (172-230)||(1642335-1642393)
chr5 (192-230)||(17627018-17627056)
chr5 (188-238)||(41939280-41939330)
chr5 (187-235)||(1082236-1082284)
[»] chr4 (7 HSPs)
chr4 (187-239)||(12192508-12192560)
chr4 (184-220)||(28568216-28568252)
chr4 (192-238)||(53468593-53468639)
chr4 (184-237)||(9913893-9913946)
chr4 (187-240)||(11949780-11949833)
chr4 (176-237)||(50774567-50774628)
chr4 (192-236)||(22411759-22411803)
[»] chr6 (2 HSPs)
chr6 (187-238)||(9111040-9111091)
chr6 (176-237)||(7082998-7083059)
[»] chr3 (3 HSPs)
chr3 (183-238)||(2753717-2753772)
chr3 (187-230)||(7938725-7938768)
chr3 (176-236)||(37364435-37364495)
[»] chr7 (4 HSPs)
chr7 (187-237)||(47667955-47668005)
chr7 (185-238)||(34369472-34369525)
chr7 (188-240)||(10461782-10461834)
chr7 (159-207)||(32896453-32896501)
[»] chr2 (5 HSPs)
chr2 (187-237)||(11560492-11560542)
chr2 (185-238)||(9517024-9517077)
chr2 (185-238)||(11931598-11931651)
chr2 (187-240)||(20455882-20455935)
chr2 (185-238)||(32204537-32204590)
[»] scaffold0098 (1 HSPs)
scaffold0098 (185-237)||(5419-5471)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 35889881 - 35889618
Alignment:
Q  19 atgggtttcccactttcacttatgatgggtctagacnnnnnnnnnggaagttgatcaaagaatgactagatttgtggagttgctgtagatgctgactaac 118  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35889881 atgggtttcccactttcacttatgatgggtctagacaaaaaaaa-ggaagttgatcaaagaatgactagatttgtggagttgctgtagatgctgactaac 35889783  T
Q  119 taggatgtatttgaagaatgttatcaaacatgttgtgcac-------tgtggtggctaatgttcgaactctaaatcttgtatatattatgcattgttcgt 211  Q
    |||||||||||||||||||||||| ||||||||| |||||       | |||||||||||||||||||  || | ||| | ||||||||||||||| |||    
T  35889782 taggatgtatttgaagaatgttatgaaacatgttttgcacttttttttttggtggctaatgttcgaaccgtagaccttatgtatattatgcattgtccgt 35889683  T
Q  212 accaattgaactatgctcatgaggacacatattgtgcactttaaatacgatcaagtgatatatca 276  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  35889682 accaattgaattatgctcatgaggacacatgttgtgcactttaaatacgatcaaatgatatatca 35889618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 35889605 - 35889562
Alignment:
Q  298 aaatcaaggtattccctcccgcaacaaatgtttatccatgcata 341  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  35889605 aaatcaaggtattccctcccgcaacaaatgtttacccatgcata 35889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 37117539 - 37117591
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||||| ||||||    
T  37117539 atcttgaatatattatgcattgttcataccaattgatctaagctcacgaggac 37117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 10732792 - 10732843
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    ||||||||||||||||||||||| ||||||||||  || ||||| |||||||    
T  10732792 cttgtatatattatgcattgttcataccaattgagttaagctcacgaggaca 10732843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 33445614 - 33445563
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||| |||||||    
T  33445614 cttgtatatattatgcattgttcctaccaactgagctaagctcacgaggaca 33445563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 32232368 - 32232445
Alignment:
Q  161 tggtggctaatgttcgaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||| ||| ||| |||||  ||||||| ||||||||||||||||||| || ||||| | ||| ||||| |||||||    
T  32232368 tggtggttaaagtttgaacttcaaatcttatatatattatgcattgttcatatcaattaacctaagctcacgaggaca 32232445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 33555489 - 33555437
Alignment:
Q  172 gttcgaactctaaatcttgtatatattatgcattgttcgtaccaattgaacta 224  Q
    ||||| || |||||||||| |||||||||||||||| | |||||| |||||||    
T  33555489 gttcgtaccctaaatcttgaatatattatgcattgtccataccaactgaacta 33555437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 44037379 - 44037411
Alignment:
Q  184 aatcttgtatatattatgcattgttcgtaccaa 216  Q
    |||||||||||||||||||||||||| ||||||    
T  44037379 aatcttgtatatattatgcattgttcataccaa 44037411  T

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Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 35308228 - 35308178
Alignment:
Q  188 ttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||||||||||||||||||| |||||| ||||||| ||||| |||||||    
T  35308228 ttgtatatattatgcattgttcataccaactgaactaagctcacgaggaca 35308178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 32998899 - 32998964
Alignment:
Q  172 gttcgaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    ||||||||| |||| |||| || |||||| |||||||| ||||||||||| || ||||| ||||||    
T  32998899 gttcgaactgtaaaccttgcatgtattatacattgttcctaccaattgaaataagctcacgaggac 32998964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 27853401 - 27853349
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    ||||||||||||||||||||||||| |||||| |||  || ||||| ||||||    
T  27853401 atcttgtatatattatgcattgttcataccaactgagttaagctcacgaggac 27853349  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 50595896 - 50595952
Alignment:
Q  183 aaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggacac 239  Q
    |||||||| |||| ||||||||||||| |||||||||| ||| ||||| || |||||    
T  50595896 aaatcttgcatattttatgcattgttcataccaattgagctaagctcacgatgacac 50595952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 20175784 - 20175720
Alignment:
Q  172 gttcgaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgagga 236  Q
    ||||||||||| ||||||||||||||||| |||||| | |||||| ||| ||| ||||| |||||    
T  20175784 gttcgaactctgaatcttgtatatattatacattgtccataccaactgagctaagctcacgagga 20175720  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 176064 - 176122
Alignment:
Q  161 tggtggctaatgttcgaactctaaatcttgtatatattatgcattgttcgtaccaattga 220  Q
    ||||||||| ||||||||| | |||| ||||||||||||||||||||  |||||||||||    
T  176064 tggtggctagtgttcgaaccc-aaatattgtatatattatgcattgtctgtaccaattga 176122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 1642393 - 1642335
Alignment:
Q  172 gttcgaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctca 230  Q
    |||||||||| | |||||| |||||||||||||||||  |||||| ||| |||||||||    
T  1642393 gttcgaactccagatcttgcatatattatgcattgtttttaccaactgagctatgctca 1642335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 230
Target Start/End: Complemental strand, 17627056 - 17627018
Alignment:
Q  192 atatattatgcattgttcgtaccaattgaactatgctca 230  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  17627056 atatattatacattgtccgtaccaattgaactatgctca 17627018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 41939280 - 41939330
Alignment:
Q  188 ttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||||||||||||||| ||| |||||||||| ||| ||||| |||||||    
T  41939280 ttgtatatattatgcattattcataccaattgagctaagctcacgaggaca 41939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 1082236 - 1082284
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgagg 235  Q
    |||||||||||||| |||||| | |||||| ||||||| ||||||||||    
T  1082236 cttgtatatattatacattgtccctaccaactgaactaagctcatgagg 1082284  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 12192508 - 12192560
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggacac 239  Q
    |||| |||||||||||||||||| |||||||||||||| | | ||||||||||    
T  12192508 cttgcatatattatgcattgttcataccaattgaactaagtttatgaggacac 12192560  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 28568252 - 28568216
Alignment:
Q  184 aatcttgtatatattatgcattgttcgtaccaattga 220  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28568252 aatcttgtatatattatgcattgttcataccaattga 28568216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 53468593 - 53468639
Alignment:
Q  192 atatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||| ||||||||||||| |||||||||| ||||||||| |||||||    
T  53468593 atattttatgcattgttcataccaattgagctatgctcacgaggaca 53468639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 9913946 - 9913893
Alignment:
Q  184 aatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    |||||||||||| ||||||||||||| |||||| ||| ||| ||||| ||||||    
T  9913946 aatcttgtatattttatgcattgttcataccaactgagctaagctcacgaggac 9913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 11949780 - 11949833
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggacaca 240  Q
    |||| |||||||||||||||| | |||||| ||| ||| |||||||||||||||    
T  11949780 cttgcatatattatgcattgtccataccaactgagctaagctcatgaggacaca 11949833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 50774628 - 50774567
Alignment:
Q  176 gaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    |||| ||||||||||||||| ||||| ||||||  |||||||||| ||| ||||| ||||||    
T  50774628 gaaccctaaatcttgtatattttatgtattgtttataccaattgagctaagctcacgaggac 50774567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 22411803 - 22411759
Alignment:
Q  192 atatattatgcattgttcgtaccaattgaactatgctcatgagga 236  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||    
T  22411803 atatattatgcattgtccataccaactgagctatgctcatgagga 22411759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 9111091 - 9111040
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||| |||||||||||||||||| |||||| ||||||| ||||| |||||||    
T  9111091 cttgcatatattatgcattgttcataccaactgaactaagctcacgaggaca 9111040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 7082998 - 7083059
Alignment:
Q  176 gaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    |||||| | |||||| |||||||||||||||| | |||||||||| ||| ||||| ||||||    
T  7082998 gaactccagatcttgcatatattatgcattgtccttaccaattgagctaagctcacgaggac 7083059  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 2753717 - 2753772
Alignment:
Q  183 aaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||||| |||||||||||||||| | ||| || ||||||||||||| |||||||    
T  2753717 aaatcttgcatatattatgcattgtccatactaactgaactatgctcaagaggaca 2753772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 7938768 - 7938725
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctca 230  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||    
T  7938768 cttgtatatattatgcattgttcataccaactgaactaagctca 7938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 37364435 - 37364495
Alignment:
Q  176 gaactctaaatcttgtatatattatgcattgttcgtaccaattgaactatgctcatgagga 236  Q
    |||||| | ||||||||||| ||||||||||| | |||||||| | ||||||||| |||||    
T  37364435 gaactccagatcttgtatattttatgcattgtccataccaattaagctatgctcacgagga 37364495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 47667955 - 47668005
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    ||||||||||||||||||||||  ||| || ||||||| ||||||||||||    
T  47667955 cttgtatatattatgcattgtttctacaaactgaactaagctcatgaggac 47668005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 34369525 - 34369472
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||| |||||||||||||||| | ||| || ||||||||||||| |||||||    
T  34369525 atcttgcatatattatgcattgtccatactaactgaactatgctcacgaggaca 34369472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 10461782 - 10461834
Alignment:
Q  188 ttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggacaca 240  Q
    |||||||||||||||||||| | || ||||||||||| |||| ||| ||||||    
T  10461782 ttgtatatattatgcattgtccttatcaattgaactaagctcgtgatgacaca 10461834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 32896453 - 32896501
Alignment:
Q  159 tgtggtggctaatgttcgaactctaaatcttgtatatattatgcattgt 207  Q
    ||||||| || | |||||||| | |||||||||||||||||||||||||    
T  32896453 tgtggtgtctgaggttcgaaccccaaatcttgtatatattatgcattgt 32896501  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 11560542 - 11560492
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    |||| |||||||||||||||| | |||||||||| ||| ||||||||||||    
T  11560542 cttgcatatattatgcattgtccctaccaattgagctaagctcatgaggac 11560492  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 9517024 - 9517077
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    ||||||||||||||||||||||||| |||||| ||| |||  |||| |||||||    
T  9517024 atcttgtatatattatgcattgttcataccaactgagctaatctcacgaggaca 9517077  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 11931651 - 11931598
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||| |||||||||||||||| | |||||||| ||||| ||||| |||||||    
T  11931651 atcttgcatatattatgcattgtccctaccaattaaactaagctcacgaggaca 11931598  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 20455935 - 20455882
Alignment:
Q  187 cttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggacaca 240  Q
    |||| |||||||||||||||| | |||||||||| ||| ||||| |||||||||    
T  20455935 cttgcatatattatgcattgtccataccaattgagctaagctcacgaggacaca 20455882  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 32204590 - 32204537
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggaca 238  Q
    |||||| |||||||||||||||||| | |||||||| ||| ||||| |||||||    
T  32204590 atcttgcatatattatgcattgttcatgccaattgagctaagctcacgaggaca 32204537  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 5471 - 5419
Alignment:
Q  185 atcttgtatatattatgcattgttcgtaccaattgaactatgctcatgaggac 237  Q
    |||||| |||||||||||||||||| |||||| ||| ||| ||||| ||||||    
T  5471 atcttggatatattatgcattgttcttaccaactgagctaagctcacgaggac 5419  T

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