View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_low_76 (Length: 267)
Name: NF2071_low_76
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_low_76 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 53208249 - 53208012
Alignment:
| Q |
13 |
aaaattatttaaacaataaggaatgcaatgatatatttatattcgtgtcacaattgataacaagaaggaccacccaaaaactatgagtgaaacaaggtca |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53208249 |
aaaattatttaaacaataaggaatgcaatgatatatttatattcgtgtcacaattgataacaagaaggaccacccaaaaactatgagtgaaacaaggtca |
53208150 |
T |
|
| Q |
113 |
aggaccaccaagattataatagttgttggtgaacgatgataactaatagaaaattctttgttgaaaagccaacccaataatagagataattaattagtac |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53208149 |
aggaccaccaagattataatagttgttggtgaacgatgaccactaatagaaaattctttgttgaaaagccaacccaataatagagataattaattagtac |
53208050 |
T |
|
| Q |
213 |
aatatcactaatgattcccaattgtacacatagctata |
250 |
Q |
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||||||||||||||||||||||||||| |||||||||| |
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| T |
53208049 |
aatatcactaatgattcccaattgtacgcatagctata |
53208012 |
T |
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