View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2071_low_82 (Length: 250)
Name: NF2071_low_82
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_low_82 |
 | |
|
| [»] scaffold0006 (6 HSPs) |
| | |
|
| [»] scaffold0460 (1 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0783 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0006 (Bit Score: 171; Significance: 6e-92; HSPs: 6)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 58655 - 58445
Alignment:
| Q |
5 |
gcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgt |
104 |
Q |
| |
|
|||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
58655 |
gcgcagtaggagttgtgattaaatattttagtccattgcattttattatctccaactgtgtcaaatgattaagggtgacagaggaaggcatcaaatttgt |
58556 |
T |
|
| Q |
105 |
cagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattga |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |
|
|
| T |
58555 |
cagactagaacaactaagaacctctaagcattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggcaattca |
58456 |
T |
|
| Q |
205 |
ttcaatatcag |
215 |
Q |
| |
|
| ||||||||| |
|
|
| T |
58455 |
tgcaatatcag |
58445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 146490 - 146276
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
146490 |
cttcgtgcagtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacggaggaaggcatcaaat |
146391 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
146390 |
ttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggtaa |
146291 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
146290 |
ttcattcaacatcag |
146276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 141954 - 141744
Alignment:
| Q |
5 |
gcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgt |
104 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
141954 |
gcgccgtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagagtgacagaggaaggcatcaaatttgt |
141855 |
T |
|
| Q |
105 |
cagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattga |
204 |
Q |
| |
|
|| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||| | |
|
|
| T |
141854 |
caaactagaacaactacgaaccattaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatattgaagtttaggtaattca |
141755 |
T |
|
| Q |
205 |
ttcaatatcag |
215 |
Q |
| |
|
||||| ||||| |
|
|
| T |
141754 |
ttcaacatcag |
141744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 111370 - 111161
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
111370 |
cttcgtgcagtaggagttgtgatcaaatattttagcccattgcattttattatctctaaccgcctcagatgattaagtgtgacagaggaaggcatcaaat |
111271 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| ||| |||| ||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
111270 |
ttatcaaactagaacagctatcaaccactaagtgttcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaa |
111171 |
T |
|
| Q |
201 |
ttgattcaat |
210 |
Q |
| |
|
|||||||||| |
|
|
| T |
111170 |
ttgattcaat |
111161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 220220 - 220016
Alignment:
| Q |
11 |
taggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagact |
110 |
Q |
| |
|
|||||| ||| || |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||| ||| ||| |
|
|
| T |
220220 |
taggagttgtaatcaaatattttagcccattgcattttattatctctaacattgtgagatgattaagggtgacagaggaaggcatcaaatttatcaaact |
220121 |
T |
|
| Q |
111 |
agaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaat |
210 |
Q |
| |
|
|||||||| | ||| |||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
220120 |
agaacaacaatcaacaagtaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaat |
220021 |
T |
|
| Q |
211 |
atcag |
215 |
Q |
| |
|
||||| |
|
|
| T |
220020 |
atcag |
220016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 169622 - 169408
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| ||||||||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
169622 |
cttcgtgcagtaggagttgtgatcaaatattttagcccattgcatcttattacctctaactttgtgagatgattaagggtgacagaggaaggcatcaaat |
169523 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| | ||| | ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
169522 |
ttatcaaactagaacagttttcaacatttaagcattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaa |
169423 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
169422 |
gtgattcaatgtcag |
169408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 20792473 - 20792687
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20792473 |
cttcgtgcggtaggagttgtgatcaaatattttagcccattgcattttattatctccaactttgtcagatgattaagggtgacggaggaaggcatcaaat |
20792572 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
20792573 |
ttgtcagactagaacaactatcaacatctaagtattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggtaa |
20792672 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
20792673 |
ttcattcaacatcag |
20792687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 20813037 - 20813227
Alignment:
| Q |
25 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
124 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||| || || |
|
|
| T |
20813037 |
aaatattttagcccattgcattctgttatctctaactttgtgagatgattaagggtgaccgaggaaggcatcaaatttatcaaactagaacagttagaaa |
20813136 |
T |
|
| Q |
125 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaatatcag |
215 |
Q |
| |
|
| | ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20813137 |
catttaagcattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaatgtcag |
20813227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13656729 - 13656515
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13656729 |
cttcgtgcagtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacggaggaaggcatcaaat |
13656630 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
13656629 |
ttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggtaa |
13656530 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
13656529 |
ttcattcaacatcag |
13656515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13589212 - 13588998
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| ||||||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
13589212 |
cttcgtgcagtaggagttgtgatcaaatattttagcccattgcatcttattacctctaacattgtgagatgattaagggtgacagaggaaggcatcaaat |
13589113 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
13589112 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaactcaagaattgggtcaatttgggatccttcctcacatatatgttgaagttcaggtaa |
13589013 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| | |||||||||| |
|
|
| T |
13589012 |
ttcaatcaatatcag |
13588998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 13652193 - 13651983
Alignment:
| Q |
5 |
gcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgt |
104 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
13652193 |
gcgccgtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagtgtgacagaggaaggcatcaaatttgt |
13652094 |
T |
|
| Q |
105 |
cagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattga |
204 |
Q |
| |
|
|| ||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||| | |
|
|
| T |
13652093 |
caaactagaacaactacgaacctttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatattgaagtttaggtaattca |
13651994 |
T |
|
| Q |
205 |
ttcaatatcag |
215 |
Q |
| |
|
||||| ||||| |
|
|
| T |
13651993 |
ttcaacatcag |
13651983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 20488780 - 20488566
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| ||||||| || ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
20488780 |
cttcgtgccgtagaagttgtgaatatatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacagaggaaggcattaaat |
20488681 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||| |
|
|
| T |
20488680 |
ttatcaaactagaacaactatcaacatctaagtattcaaggaactcaagaactgggtcaatttggcatccttcctcacatatttgttgaagttcaggtaa |
20488581 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
20488580 |
ttcattcaatatcag |
20488566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 15897776 - 15897985
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
|||||||| ||| ||| |||||||||||||||||||| || |||||| |||| ||| |||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
15897776 |
cttcgcgctgtatgagttgtgattaaatattttagccgatcgcatttcattacctctaacttagtgagatgattaagggtgacggaggaaggcatcaaat |
15897875 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15897876 |
ttgacaaactagaacaactacgaaccagtaagcattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggtaa |
15897975 |
T |
|
| Q |
201 |
ttgattcaat |
210 |
Q |
| |
|
|| ||||||| |
|
|
| T |
15897976 |
ttcattcaat |
15897985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13508699 - 13508485
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
13508699 |
cttcgtgcagtaggagttgtgatcaaatattttagctcattgcattttattacctctaactttgtgagatgattaagggtggcggaggaaggcatcaaat |
13508600 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
13508599 |
ttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggtaa |
13508500 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
13508499 |
ttcattcaacatcag |
13508485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13612494 - 13612280
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
13612494 |
cttcgtgcagtaggagttgtgatcaaatattttagctcattgcattttattacctctaactttgtgagatgattaagggtggcggaggaaggcatcaaat |
13612395 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
13612394 |
ttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggtaa |
13612295 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
13612294 |
ttcattcaacatcag |
13612280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13545067 - 13544853
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| ||||| ||||||||||||||||||||||||| ||||||| || | |||||||| |||||||||| | |||||||||||||||| |
|
|
| T |
13545067 |
cttcgtgcagtaggagttgtgaataaatattttagcccattgcatttttttatctctaaatctgtcagataattaagggtggcagaggaaggcatcaaat |
13544968 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||| || |
|
|
| T |
13544967 |
ttgtcagactagaacaaccatcaacatctaagcattcaaggaactcaagaactgggtcaatatgagatccttcctcacatatatgttgaagtttaggcaa |
13544868 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
13544867 |
ttcatgcaatatcag |
13544853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 19136230 - 19136444
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19136230 |
cttcgtgcagtaggagttgtgatcaaatattttagctcattgcattttattacctctaactttgtgagatgattaagggtgacggaggaaggcatcaaat |
19136329 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||| |||||||||| || ||||| |||| |||||||||| ||||||||||| |||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
19136330 |
ttgtcaaactagaacaattacgaacccttaagtattcaaggaactcaagaactggatcaatttgagatccttcatcacatatatgttgaagtttaggtaa |
19136429 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||| ||||| |
|
|
| T |
19136430 |
ttcattcaacatcag |
19136444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 13686928 - 13686736
Alignment:
| Q |
10 |
gtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagac |
109 |
Q |
| |
|
||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
13686928 |
gtaggagttgtgatcaaatattttagcacattgcattttattacctctaactttgtgagatgattaagggtggcggaggaaggcatcaaatttgtcaaac |
13686829 |
T |
|
| Q |
110 |
tagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaatt |
202 |
Q |
| |
|
||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
13686828 |
tagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggtaatt |
13686736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13672008 - 13671794
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| ||||||||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
13672008 |
cttcgtgcagtaggagttgtgatcaaatattttagcccattgcatcttattacctctaactttgtgagatgattaagggtgacagaggaaggcatcaaat |
13671909 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| | ||| | ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
13671908 |
ttatcaaactagaacagttttcaacatttaagcattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaa |
13671809 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
13671808 |
gtgattcaatgtcag |
13671794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20369899 - 20369698
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
20369899 |
cttcgtgcagtaggagttgtgatcaaatattttagcccattgcattttattatctctaaccttgtgagatgattaagggtgacagaggaaggcatcaaat |
20369800 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| | | ||| |||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
20369799 |
ttatcaaactagaacatccatcaacaagtaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaa |
20369700 |
T |
|
| Q |
201 |
tt |
202 |
Q |
| |
|
|| |
|
|
| T |
20369699 |
tt |
20369698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 20478969 - 20478761
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| ||||| ||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
20478969 |
cttcgtgcagtaggagttgtgatcaaatactttagcccattgcatcttattacctctaactctgtgagatgattaagggtgacagaggaaggcatcaaat |
20478870 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| ||| |||| |||| |||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
20478869 |
ttatcaaactagaacagctatcaaccaataagtattcaaggaactcaagaa------caatttgagatccttcctcacatatatgttgaagtttaggtaa |
20478776 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
20478775 |
tttattcaatatcag |
20478761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 16495576 - 16495774
Alignment:
| Q |
4 |
cgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttg |
103 |
Q |
| |
|
||||| ||| ||||||| ||||||||||||||||||||||| ||| |||||| | | || ||||||| || ||||||||||||| | ||||||| |
|
|
| T |
16495576 |
cgcgctgtatgagatgtaattaaatattttagcccattgcaatttcctatctcgagatactccaaatgattacggttgacggaggaaggaaacaaatttt |
16495675 |
T |
|
| Q |
104 |
tcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaatt |
202 |
Q |
| |
|
||| |||||||||| | ||| |||||| ||||||||| ||||||| |||||||||| | ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
16495676 |
tcatactagaacaatcataaacacctaagccttcaaggaattcaagaattgggtcaattggagatcctttctcacatatatgttgaagtttaggtaatt |
16495774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16466608 - 16466807
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| |||||| |||||| ||||||||||||||||||||||| ||| |||| ||| | | ||||| |||||||||||| |||||||| | ||||| |
|
|
| T |
16466608 |
cttcgtgccgtaaaagatgtaattaaatattttagcccattgcaattttcaatcttcaaatattccagattattaagggtgacagaggaaggaaacaaat |
16466707 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||| ||||||||||| | | ||| || ||||||||| |||||||||||||||||| | ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
16466708 |
ttgttagactagaacagccattaactatgaactcttcaaggaactcaagaactgggtcaattcgagatccctccttacataactgttgaagtttaggtaa |
16466807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 9769 - 9555
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| ||||||| || ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9769 |
cttcgtgccgtagaagttgtgaatatatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacagaggaaggcatcaaat |
9670 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||| |
|
|
| T |
9669 |
ttatcagactagaacaactatcaacatctaagtattcaaggaactcaagaactgggtcaatttggcatccttcctcacatatttgttgaagttcaggtaa |
9570 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
9569 |
ttcattcaatatcag |
9555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 38056488 - 38056688
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38056488 |
cttcgcgccgtaggagttgtgaatatatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacagaggaaggcatcaaat |
38056587 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||| ||||| |||||||| ||| | ||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
38056588 |
ttgtcaaactaggacaactaaaaacatttaagcattcaaggaactcaagaacttggtcaatttggaatccttcctcacatatatgttgaagttcaggtaa |
38056687 |
T |
|
| Q |
201 |
t |
201 |
Q |
| |
|
| |
|
|
| T |
38056688 |
t |
38056688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 30703856 - 30704070
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||| ||||||||| ||| ||| || | ||||||| |||||||||| | || ||||||||||||| |
|
|
| T |
30703856 |
cttcgcgcagtaggagttgtgattaaatattttagccccttgcattttcttacctctaaataagtcagatcattaagggtggcagatgaaggcatcaaat |
30703955 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||| ||||| ||| | |||| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
30703956 |
ttatcaaactaggacaacggttaacgtgtaagtattcaaggaactcaacaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggtaa |
30704055 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
| ||||||| |||| |
|
|
| T |
30704056 |
tacattcaatgtcag |
30704070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 39375 - 39589
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
|||||||| |||| || ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
39375 |
cttcgcgcagtagaagttgtgaataaatattttagcccattgcattttgttacctccaactgtgtcagatgattaagggtgacggaggatggcatcaaat |
39474 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|||||||||||||||||| | ||| ||||| ||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||| || || |
|
|
| T |
39475 |
ttgtcagactagaacaaccatcaacatctaaccattcaaggaactcaagaactgggtcaatatgagatccttcctcacatatatgttgaagtttgggcaa |
39574 |
T |
|
| Q |
201 |
ttgattcaatatcag |
215 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
39575 |
ttcatgcaatatcag |
39589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 27939 - 27753
Alignment:
| Q |
25 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
124 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
27939 |
aaatattttagcccattgcattctgttatctctaactttgtgagatgattaagggtgacagaggaaggcatcaaacttgttagactagaacaactaagaa |
27840 |
T |
|
| Q |
125 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaata |
211 |
Q |
| |
|
|| |||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27839 |
cccgtaagacttcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaata |
27753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 32054 - 31868
Alignment:
| Q |
25 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
124 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
32054 |
aaatattttagcccattgcattctgttatctctaactttgtgagatgattaagggtgacagaggaaggcatcaaacttgttagactagaacaactaagaa |
31955 |
T |
|
| Q |
125 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaata |
211 |
Q |
| |
|
|| |||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
31954 |
cccgtaagacttcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaata |
31868 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 22282667 - 22282875
Alignment:
| Q |
7 |
gccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtca |
106 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||| ||| ||| || | ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22282667 |
gccgtaggagttgtgattaaatattttagcccatcacattttgttacctctaaatatgtcagacgattaagggtgacagaggaaggcatcaaatttgtca |
22282766 |
T |
|
| Q |
107 |
gactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgatt |
206 |
Q |
| |
|
|||||||||| || ||| | |||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
22282767 |
gactagaacagttactaacatttaagtattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggtaattcatt |
22282866 |
T |
|
| Q |
207 |
caatatcag |
215 |
Q |
| |
|
||| ||||| |
|
|
| T |
22282867 |
caacatcag |
22282875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 21815943 - 21815753
Alignment:
| Q |
25 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
124 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21815943 |
aaatattttagcccattgcattctgttatctctaactttgcaagatgattaaggttgacggaggaaggcatcaaatttgtcagactagaacaactatcaa |
21815844 |
T |
|
| Q |
125 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaatatcag |
215 |
Q |
| |
|
| | |||| |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
21815843 |
catgtaagtattcaagggactcaagaactgggtcaatttgggatccttcctcgcatatatgttgaagtttaggtaattcattcaatgtcag |
21815753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 117218 - 117017
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| |||||| |||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
117218 |
cttcgtgcagtaggagttgtgatcaaatattttagcccattgcattctattatctctaaccttgtgagatgattaagggtgacagaggaaggcatcaaat |
117119 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| | | ||| | |||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
117118 |
ttatcaaactagaacatccatcaacatgtaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaa |
117019 |
T |
|
| Q |
201 |
tt |
202 |
Q |
| |
|
|| |
|
|
| T |
117018 |
tt |
117017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0783 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0783
Description:
Target: scaffold0783; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 998 - 797
Alignment:
| Q |
1 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
100 |
Q |
| |
|
||||| || ||||||| ||||| ||||||||||| ||||||||||||| ||| || || | | ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
998 |
cttcgagcagtaggagttgtgaataaatattttaacccattgcattttgttacctttaaatatttcagatgattaagggtgacagaggaaggcatcaaat |
899 |
T |
|
| Q |
101 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
200 |
Q |
| |
|
|| ||| ||||||||| | ||| |||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| |
|
|
| T |
898 |
ttatcaaactagaacagttttcaacatctaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagttttggtaa |
799 |
T |
|
| Q |
201 |
tt |
202 |
Q |
| |
|
|| |
|
|
| T |
798 |
tt |
797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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