View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_low_94 (Length: 241)
Name: NF2071_low_94
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_low_94 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 38124247 - 38124066
Alignment:
| Q |
16 |
cattttcatctaaagaaaaccttcccggaacaatgcctgaactattattagaattaagcttcttcaatgaagaagaagatgcaagttttcctgtgaatct |
115 |
Q |
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| T |
38124247 |
cattttcatctaaagaaaaccttcccggaacaatgcctgaaccattattagaattaagcttcttcaatgaagaagaagatccaagttttcctgtgaatct |
38124148 |
T |
|
| Q |
116 |
tccagaaccaccaattgctcttgtttgatcattttcaaacgttctaatctctctttgactcttttgtgaaagagtgaaacta |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
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| T |
38124147 |
tccagaaccaccaattgctcttgtttgatcattttcaaacgttctaatctctctgtgactcttttgtgaaagagggaaacta |
38124066 |
T |
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